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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 3 |
| Model size | 2598 |
| Cds size | 1347 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig334.8951.1 >prot_H-paniculata_contig334.8951.1 ID=prot_H-paniculata_contig334.8951.1|Name=mRNA_H-paniculata_contig334.8951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=449bp
MDTQKVATVGINFTPSKPSRKGGDDGEDFHPVPQSQSDDGRGKVMLVSPA
ISFLARKTTASPPVRSIKPRRASGLFSSSEDQDCDRSSSSSSSKRFAIDK
KPLDSDDGPIGFKTDGTSSITLLGEDPLERSSGQPSSHQRVTDSSRRRPR
GQEQEPSSALATAGAAMCFSSPSRLPRGEGFGSGVGANAGRFTPQRNLRG
LFVSPSPKADMAPTSAFSSTIIPRQCDLLKSPGWEEPEPTLDTITAARAV
ISPEQPTRKNFRCVDQYTVVEKPATAPYSAIEEEDDDDDDEEEKDEENDE
ENDEDEDEDEEEEKEKKEEKKGVEGARETVPAPASVPASAPAPAPAPAPA
PVEEVLVTNEALRAVEMKDICTLEVLVRHTRDRVGVSGLVSWRVAELKRR
LVYLKMFPNVDSISLKPRYGGEMLHDGQALGTLDTEVTYEARKVAITA* back to topmRNA from alignment at H-paniculata_contig334:15710..20862- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig334.8951.1 ID=mRNA_H-paniculata_contig334.8951.1|Name=mRNA_H-paniculata_contig334.8951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5153bp|location=Sequence derived from alignment at H-paniculata_contig334:15710..20862- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTCCTATCCAGAGCAGAAGGGAGGTTCACCGCACAGCCTTCGGATAAACC
ATGGACACGCAAAAGGTAGCTACCGTGGGGATAAACTTCACTCCTTCTAA
GCCAAGTCGTAAGGGTGGTGATGATGGTGAAGATTTTCATCCTGTACCGC
AATCACAGTCTGACGATGGGCGTGGCAAGGTGATGCTTGTCTCTCCCGCA
ATTTCTTTTTTGGCGCGCAAAACGACAGCATCGCCACCCGTACGGTCCAT
CAAGCCCAGGAGGGCGAGCGGTCTATTCTCTTCCAGCGAAGACCAGGATT
GCGACCGTAGTAGCAGCAGCAGCAGCAGCAAGCGATTCGCCATAGACAAG
AAGCCGTTGGATTCTGATGACGGGCCCATCGGTTTCAAAACGGATGGAAC
CTCATCGATTACGTTACTGGGCGAGGACCCCCTCGAGAGAAGCAGCGGAC
AACCGAGCTCACACCAGCGCGTCACGGACAGCAGCAGACGGCGCCCACGG
GGACAAGAGCAAGAACCCAGCTCAGCGTTAGCCACAGCGGGTGCGGCGAT
GTGCTTCTCCTCTCCCTCGAGACTGCCTAGAGGAGAAGGTTTTGGCAGCG
GGGTGGGCGCAAACGCAGGGCGGTTTACGCCACAGCGGAATCTTCGGGGG
TTATTTGTGTCGCCTTCACCAAAGGCCGACATGGCGCCAACCTCTGCCTT
TAGCAGCACCATCATTCCTCGACAGTGCGACCTCCTGAAGTCGCCTGGAT
GGGAAGAACCAGGCGAGTGGATAGTCAGTGATCTATACAGTGCATTAAAT
GGGTGCATACCGCCCTTGGAGACGAGGACGGTGTCTGCTAGCAACGCCCC
CCTGCCTTCCTGCGGGTTCAGTACTCCCAACACACTCTAATCCGTGTCAT
GTACTGTTGATGTTTTTTGTACTGTTGATGTTTTTTCCCGTTTAGCTGAA
TCATGGATAGTTGTCTAGATTAAGCTGTAGCAGCGTGATCAGGATGACTT
GTCAATACCAACCCACTAATAAACAGTACAGACGGGAAATATACCCCAAT
ACACTTGAGAAATCAGTGACGCGTTCGTTTCACTGGGCTGGGGCGCGGGC
GTGGGTATGTGGCGCGGGCGTGGGTATGTGGCGCGTGCGCTTCGGGCTTC
ACACTAGCATATCTTAACTCAGTACGTATTTTGCGCTTGATGTGTAGTTC
AACTAGCTGGCATCGACCGGTATCTACAGTTTCATAACTGTGCTGCTACC
TGACCTGGGAATCTCCTGCTTGCCAGACGAGTTTTCGTCGGCGATTGACT
GATTACTATGCACCCTTGTTATATTTCCCTACGTTGTTGTTGCATTCGCC
GGTCTCACGGTCTGAAGAAATTAGCTGCCTCCGTTCTTTCTTTATGGTTT
GGTACCTCACATCCCTCGTGTATGTAGTACGGTAACTACAAACAGGACAT
GGGTAGTATGGTTAGGATCAGGGTTGTACGGTTAGGCCACATGAGCCATC
AACACCGTTCTCGATGCCCGATGTTGACTTTGTGTCTGCACTTCCCCTCC
CCCCGCACGCGCGCCTAACCTTATATTCTTTATCCCATGTTTATTTTCGG
CAGAGCCAACCCTTGACACGATTACAGCGGCACGTGCGGTGATATCACCC
GAGCAGCCCACCCGGAAAAATTTCCGTTGTGTAGACCAATACACCGTGGT
TGAAAAGCCTGCTACAGCACCCTATTCAGCAATAGAGGAGGAGGACGACG
ACGACGACGACGAGGAGGAGAAGGACGAGGAGAACGACGAGGAGAACGAC
GAAGATGAGGACGAAGACGAGGAGGAGGAGAAGGAGAAGAAAGAAGAGAA
AAAGGGGGTCGAGGGTGCGAGAGAGACTGTGCCAGCGCCAGCGTCAGTGC
CAGCGTCGGCGCCAGCGCCAGCGCCGGCGCCGGCGCCTGCGCCTGTGGAA
GAAGTTCTTGTAACGAATGAAGCTCTGCGCGCTGTGGAGATGAAGGACAT
TTGCACGTTGGAGGTTCTTGTACGTCACACAAGGGACCGTGTAGGTGAGA
AAGAGGGCATGCAAATGGGATCGTTGGTCTCTTGGCTTCTGTTTTTCTCT
TGTGTCGAGTTGGTCGATGAAGCGTGACTTGCGAGGTCGACAGTCATCGC
ACACAACTCATCTCCCAGGCTTGTCTCACGCGTGTGTTTGTTTACTATTT
TTCATCGCCGTACACAAGACATTTTTTTTACCCCCGGAAGGCTAAGGCAA
ACACTTTTACCCTGTATATATTGTGTTTGCCATCACCCATCCATCCCGCA
CATCACGACACTCAGAAGAACGTTCTTCATAATATTCGTCGGGGACAAAC
GATCTGGGTCATCTTGTTGTTCCGCGAGGGTACTCATATTGCTCCTTACC
TTGAGCAGTACGGTATAGGCCCAATGATGAGAAAGTGTTACTTCGGGAGA
GGCTCGAAACCGATTTTGATTATAATCACGGAACAGTACAGTTTCCTGTG
TTCATATAGGAATTAATGTAGGATTCTAATTTGCTTCTATACCGAAGTAT
TTCTACCGAAGTAATTCTACATTTCCTTCAACAGAACAGAGTTATTTGTT
CCTCTGCGGGGTAGGCTCCACCCCGGTTCGGCCGAACCACGTTGGTTTAG
TGGGGGTTGTACTCATTAAAAGACCTCTGACTAGACTTCCAGTCATGCTC
AGTTCACGAGCTACCCTACCCGTTCGGGCGTAGGTCCGTGCGTACACAAG
ACATGTGCATGTTTATACCATTCAATCGTGAGGGGAAAGAGGGGATGGAG
TCAGGAAACAGGAACTGATCACCTGTGTTTTCGGAGAATTGTGGAGACAC
TTACTGACGAGAGTATCTACGTAGATGGAATGACTTGTGTGATTATTTCG
ACAACACTATCGTTGCCAGTTCCGCGGGTATTGATCAGCTCATTTCTTGG
GTGAAGAGCGTCAGTATCACACGTACTTGTGAGAGTCGTGTTATCTTTAA
CGGAGCAAGTTTGACCGATACTTTCGCCATGAACTCTATTGCTCCTGACG
TGATCGATCGAGTACTCCTCTAGTAAAAACGTTTCCTTCAGGAGTGCCTT
GCTTTGGGGTTGTCCTGGTACACAATTCCGCTGCCTGGCGCAATCGGTAG
CCACCTACCTCCCATCATGATATTCACGCTTTTATAGGGTTCTTCCCGAC
TCGAGTTGAGAAGCTTCAACAGTCAACTAGCCTTACGTAGTGTGACTGTT
TTTGCGAACGATCGCGTTTGTGTCACTATGGTTTTTTGATGGGCTCCTTT
CAACCGGAAACAGCCCACCCAATTGAACTGAAACAGAATCAATGAGATGC
ACGTATCTCGATGGTCTCTCTAGCCCGTTCACACTGAGACAGCCCACTAC
CTGAAACTACCTGAGGACTTTCCACCAAATATTTTATAGGTGCTCCTTTT
CCGCGTGGTGCTGCTGAGTCAACACCATTGGTGACGACTAGGCGTCGCGC
TCCGCTCCCACGCCCCGAAATGTGCCTTTTTTTGTCGAGAGCCTATCCCA
CCTAAAGTTGGTCAATTGATCGAAAGTTATATTTGCTCCTGGGATTCTAC
AGTGCCGTTTGGTGCCAGGACGTAGACACCGCTCCTCCCCCCCCTCCCCA
CCGTCCGCCCCGTTCCGCCCGCCCCTGAACGATCATGCACTCTAATCATT
TCTGCCTTGATGTCAATGCTACCCTTCCACGGATGATCACGTACATTCTC
CGAATCAGGAGTGAGCGGCCTCGTGTCTTGGCGAGTAGCGGAACTGAAGA
GGCGTCTAGTGTACCTGAAGATGTTCCCCAACGTGGATTCCATCTCTCTT
AAACCGCGTTACGGGGGCGAGATGCTCCACGACGGTCAGGCGCTGGGTAC
TCTCGACACGGAGGTCACGTACGAAGCCCGAAAAGTGGCCATCACGGCGT
GATTCGTTTTGTTTCGCTAGCGTTCGTTATTCATAAATGCACGGATTGGC
CACTCCTCACAAGGGCATGCTCGGTATGCAGAGTGAAATCATTGGTGGGT
GGTTTTGATAATCTCATTTCCCCCTTGTGCGGTCTCTGCCTGCTGAGTGA
AGGGCGTAGGACGTGGGCCACTATCTCTCTGTCGGCTTATCTACGTTTAG
GGCATTGAAATTGTACTGGTTGCCCTGTGATGACAGGCCGAAGGTGCTGG
ACATTTGCGATGCCGTTGCGGGTCACCATCTCTCTGCCGGTTTCGCTACG
TTTACAGGGCAATGGAATTGTACCAGTTGCTTTGTGATGACAGGCTTGAA
TGTGCTGGGGATTTGCTATCCCGTTGCTTCGAGGACCCTTTCACCCAAAG
ATGAAAATCGACCGCTTTAGGATGAATTGGAGTTGGATTGGGGGCGGAGC
TAGCTTGAAAAGCCGCTGTGTACCATGTCTCCTCGCGTTGGTGGTCTTTA
GCTCGCCCGATCTCTCTCGATGTTCGTGAATTCAAGTAGACATTATATTT
TGTTGCGAGTTACGGTTTAAGGAATGAAGAGTTGATAGCATGTAGGATTT
GGTTTACTGTGGTTATCAAAAGCAAAAGTAAACGCTCCATCAGTGCAAGA
CAGGATTGGTAGGCGCTCGGAAGACCGAAACTGGGGAAGTCTTACTATCG
GAGCAACGGGATTGACGGGGATTGGTTCAAGTACGATTGGAGTATTTTTT
AGCGGGACTGCCGTTGGTCTCTTCTTGTTGCCTTGTGGTAGACTTGATAT
GGTGTCAACACGAAGTCTTAAGGTCCATAGAATTTCTAGAGTAGGATAAA
AAAATGGAGGATGGTGGGCTCGACCGGAGTGTTGGTGTCTTTCTGGCAAG
ATTAATAAAAAGCCGTCGCAGCACATCACATCCTTCATCCTAAACCGTCA
TCTTCGCACTATCGGTGAAAAAACATTCGAGATTGTTTTTTTGTCATTTT
CATTGCAGTTGTGCTTCCTCCTGGATCAAATACCAGCCGTCTTCATAACT
GACTGAGACAAAAACCAAGAGTAGAGCGTGTACGAACCCTCGTGACCGTG
AAGGGGGTCGGTTTTGTGTAGAAATTAAAGTTAAGGGGTGCTCTTTTCCC
TATTCTATCAAAACATGATGGTGACACCACGTGAATTCGGCGAAGTTACT
TGC back to topCoding sequence (CDS) from alignment at H-paniculata_contig334:15710..20862- >mRNA_H-paniculata_contig334.8951.1 ID=mRNA_H-paniculata_contig334.8951.1|Name=mRNA_H-paniculata_contig334.8951.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2694bp|location=Sequence derived from alignment at H-paniculata_contig334:15710..20862- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGACACGCAAAAGGTAGCTACCGTGGGGATAAACTTCACTCCTTCTAA
GCCAAGTCGTAAGGGTGGTGATGATGGTGAAGATTTTCATCCTGTACCGC
AATCACAGTCTGACGATGGGCGTGGCAAGGTGATGCTTGTCTCTCCCGCA
ATTTCTTTTTTGGCGCGCAAAACGACAGCATCGCCACCCGTACGGTCCAT
CAAGCCCAGGAGGGCGAGCGGTCTATTCTCTTCCAGCGAAGACCAGGATT
GCGACCGTAGTAGCAGCAGCAGCAGCAGCAAGCGATTCGCCATAGACAAG
AAGCCGTTGGATTCTGATGACGGGCCCATCGGTTTCAAAACGGATGGAAC
CTCATCGATTACGTTACTGGGCGAGGACCCCCTCGAGAGAAGCAGCGGAC
AACCGAGCTCACACCAGCGCGTCACGGACAGCAGCAGACGGCGCCCACGG
GGACAAGAGCAAGAACCCAGCTCAGCGTTAGCCACAGCGGGTGCGGCGAT
GTGCTTCTCCTCTCCCTCGAGACTGCCTAGAGGAGAAGGTTTTGGCAGCG
GGGTGGGCGCAAACGCAGGGCGGTTTACGCCACAGCGGAATCTTCGGGGG
TTATTTGTGTCGCCTTCACCAAAGGCCGACATGGCGCCAACCTCTGCCTT
TAGCAGCACCATCATTCCTCGACAGTGCGACCTCCTGAAGTCGCCTGGAT
GGGAAGAACCAGATGGACACGCAAAAGGTAGCTACCGTGGGGATAAACTT
CACTCCTTCTAAGCCAAGTCGTAAGGGTGGTGATGATGGTGAAGATTTTC
ATCCTGTACCGCAATCACAGTCTGACGATGGGCGTGGCAAGGTGATGCTT
GTCTCTCCCGCAATTTCTTTTTTGGCGCGCAAAACGACAGCATCGCCACC
CGTACGGTCCATCAAGCCCAGGAGGGCGAGCGGTCTATTCTCTTCCAGCG
AAGACCAGGATTGCGACCGTAGTAGCAGCAGCAGCAGCAGCAAGCGATTC
GCCATAGACAAGAAGCCGTTGGATTCTGATGACGGGCCCATCGGTTTCAA
AACGGATGGAACCTCATCGATTACGTTACTGGGCGAGGACCCCCTCGAGA
GAAGCAGCGGACAACCGAGCTCACACCAGCGCGTCACGGACAGCAGCAGA
CGGCGCCCACGGGGACAAGAGCAAGAACCCAGCTCAGCGTTAGCCACAGC
GGGTGCGGCGATGTGCTTCTCCTCTCCCTCGAGACTGCCTAGAGGAGAAG
GTTTTGGCAGCGGGGTGGGCGCAAACGCAGGGCGGTTTACGCCACAGCGG
AATCTTCGGGGGTTATTTGTGTCGCCTTCACCAAAGGCCGACATGGCGCC
AACCTCTGCCTTTAGCAGCACCATCATTCCTCGACAGTGCGACCTCCTGA
AGTCGCCTGGATGGGAAGAACCAGAGCCAACCCTTGACACGATTACAGCG
GCACGTGCGGTGATATCACCCGAGCAGCCCACCCGGAAAAATTTCCGTTG
TGTAGACCAATACACCGTGGTTGAAAAGCCTGCTACAGCACCCTATTCAG
CAATAGAGGAGGAGGACGACGACGACGACGACGAGGAGGAGAAGGACGAG
GAGAACGACGAGGAGAACGACGAAGATGAGGACGAAGACGAGGAGGAGGA
GAAGGAGAAGAAAGAAGAGAAAAAGGGGGTCGAGGGTGCGAGAGAGACTG
TGCCAGCGCCAGCGTCAGTGCCAGCGTCGGCGCCAGCGCCAGCGCCGGCG
CCGGCGCCTGCGCCTGTGGAAGAAGTTCTTGTAACGAATGAAGCTCTGCG
CGCTGTGGAGATGAAGGACATTTGCACGTTGGAGGTTCTTGTACGTCACA
CAAGGGACCGTGTAGAGCCAACCCTTGACACGATTACAGCGGCACGTGCG
GTGATATCACCCGAGCAGCCCACCCGGAAAAATTTCCGTTGTGTAGACCA
ATACACCGTGGTTGAAAAGCCTGCTACAGCACCCTATTCAGCAATAGAGG
AGGAGGACGACGACGACGACGACGAGGAGGAGAAGGACGAGGAGAACGAC
GAGGAGAACGACGAAGATGAGGACGAAGACGAGGAGGAGGAGAAGGAGAA
GAAAGAAGAGAAAAAGGGGGTCGAGGGTGCGAGAGAGACTGTGCCAGCGC
CAGCGTCAGTGCCAGCGTCGGCGCCAGCGCCAGCGCCGGCGCCGGCGCCT
GCGCCTGTGGAAGAAGTTCTTGTAACGAATGAAGCTCTGCGCGCTGTGGA
GATGAAGGACATTTGCACGTTGGAGGTTCTTGTACGTCACACAAGGGACC
GTGTAGGAGTGAGCGGCCTCGTGTCTTGGCGAGTAGCGGAACTGAAGAGG
CGTCTAGTGTACCTGAAGATGTTCCCCAACGTGGATTCCATCTCTCTTAA
ACCGCGTTACGGGGGCGAGATGCTCCACGACGGTCAGGCGCTGGGTACTC
TCGACACGGAGGTCACGTACGAAGCCCGAAAAGTGGCCATCACGGCGTGA
GAGTGAGCGGCCTCGTGTCTTGGCGAGTAGCGGAACTGAAGAGGCGTCTA
GTGTACCTGAAGATGTTCCCCAACGTGGATTCCATCTCTCTTAAACCGCG
TTACGGGGGCGAGATGCTCCACGACGGTCAGGCGCTGGGTACTCTCGACA
CGGAGGTCACGTACGAAGCCCGAAAAGTGGCCATCACGGCGTGA back to top
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