mRNA_H-paniculata_contig3317.8899.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3317.8899.1
Unique NamemRNA_H-paniculata_contig3317.8899.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: D8LNM6_ECTSI (DDE_3 domain-containing protein n=3 Tax=Ectocarpus TaxID=2879 RepID=D8LNM6_ECTSI)

HSP 1 Score: 551 bits (1421), Expect = 6.230e-186
Identity = 278/395 (70.38%), Postives = 319/395 (80.76%), Query Frame = 2
Query:  332 FIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            ++D SV ++KP+ GEV  +LQS+++LMLLF LRK+G SEN++VLQV  TFKIGH KVR +N HWW +  L ETT  GRGK+ K DDGRRRLT+ Q DQL + INDEHKAGRQVFRRTVAEW+   CN + + SN +VGGLL RLGY RR GRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+DENGVV+DG+GRTTGKGLRMIMVHAITKWGPL        FPIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGDYHAAMTD+MFMEWL+HRL+PA+NA PEF GKKMILV DNASYHH FD+EVKVPETN K +NV LLRK+GA +I +KR       +EH FEVP+EPGSSFP   R
Sbjct:  117 YMDTSVHEVKPKKGEVWTHLQSRMVLMLLFDLRKEGRSENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAAGRGKMAKEDDGRRRLTEVQADQLREFINDEHKAGRQVFRRTVAEWVHRTCNME-QPSNRSVGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDENGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--FCDGFPIEEGWFK--ETGSGKK-----KMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFEGKKMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRKFGAKSIRVKRKEGEQGFVEHNFEVPSEPGSSFPAGNR 501          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KIM5_9PHAE (DDE_3 domain-containing protein n=4 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KIM5_9PHAE)

HSP 1 Score: 516 bits (1329), Expect = 1.480e-172
Identity = 261/375 (69.60%), Postives = 299/375 (79.73%), Query Frame = 2
Query:  392 QSKLILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            +S+++LMLLF LRK G SE ++VL+V  TFKIGH KVR +N HWW +  L E T  GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLGY RR GRIKTPPL+A+RLARIR FLVEM +AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL         PIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGDYHAAMTD+MFMEWL+HRL+PA+NA PEF+GK+MILV DNASYHH FD+EVKVPETN K +NV LLR +GA +I ++R      V+E+ FEVPTEPGSSFP   R
Sbjct:  103 ESRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYEITAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMVMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNR 467          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KAU4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KAU4_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 1.110e-171
Identity = 257/368 (69.84%), Postives = 297/368 (80.71%), Query Frame = 2
Query:  332 FIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKR 1435
            ++D SV ++KP+  EV   LQS+++LMLLF LRK G  EN++VLQV  TFKIGH KVR +N HWW +  L ETT  GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLGY RR GRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VYMDESFVHQAHGS  SYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL        FPIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGD HAAMTD+MFMEWL+HRL PA+NA PEF+GK+MILV DNASYHH+FD+EVKVPE+N K +NV LLR +GA +I++KR
Sbjct:   56 YMDTSVHEVKPKKDEVWTQLQSRMVLMLLFDLRKGGCCENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPCSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCYG--FPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQVKLAKGDNHAAMTDSMFMEWLEHRLNPAYNAIPEFKGKRMILVLDNASYHHEFDAEVKVPESNTKKHNVDLLRMFGAKSISVKR 413          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KKL0_9PHAE (DDE_3 domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KKL0_9PHAE)

HSP 1 Score: 507 bits (1306), Expect = 1.360e-171
Identity = 258/372 (69.35%), Postives = 294/372 (79.03%), Query Frame = 2
Query:  401 LILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            ++LMLLF LRK+G +EN++VLQV  TFKIGH KVR +N HWW +  L ETT  GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN +  GLL RLGY  R GRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VY+D SFVHQAHGS YSYFP DE+ VV+DG+GRTTGKGLR+IMVHAITKWGPL         PIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGDYHAAMTD+MFMEWL+HRL+PA+NA PEF+GK+MILV DNASYHH FD+EVKVPETN K +NV LLR +GA +I +KR      V+E  FEVPTEPGSSFP   R
Sbjct:    1 MVLMLLFDLRKEGRAENEAVLQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAEGLLSRLGYKGRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYIDGSFVHQAHGSPYSYFPADEDEVVQDGIGRTTGKGLRVIMVHAITKWGPLAKLCVG--LPIEEGWFK--ETGSGKR-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPETNTKKHNVDLLRMFGAKSIRVKRKEGEQGVVEENFEVPTEPGSSFPAGNR 362          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KDX7_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX7_9PHAE)

HSP 1 Score: 493 bits (1270), Expect = 5.770e-166
Identity = 248/352 (70.45%), Postives = 281/352 (79.83%), Query Frame = 2
Query:  461 LQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            +QV  TFKIGH KVR +N HWW +  L ETT  GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLGY RR GRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL         PIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGDYHAAMTD+MFMEWL+HRL+PA+NA PEF+GK+MILV DNASYHH FD+EVKVPE+N K +NV LLR +GA +I ++R      V+E+  EVPTEPGSSFP   R
Sbjct:    9 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFDAEVKVPESNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNLEVPTEPGSSFPAGNR 350          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5JR41_9PHAE (DDE_3 domain-containing protein n=5 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JR41_9PHAE)

HSP 1 Score: 486 bits (1252), Expect = 7.690e-161
Identity = 248/352 (70.45%), Postives = 280/352 (79.55%), Query Frame = 2
Query:  461 LQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            +QV  TFKIGH KVR +N HWW +  L ETT  GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLGY RR GRIKTPPL+A+RLARIR FLV M++AKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL         PIEEGWFK  E G GK+      M DE+TAEFLWQ KLAKGDYHAAMTD+MFMEWL+HRL+PA+NA PEF+GK+MILV DNASYHH F SEVKVPETN K +NV LLR +GA +I ++R      V+E+ FEVPTEPGSSFP   R
Sbjct:  137 VQVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLV-MNMAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMILVLDNASYHHGFVSEVKVPETNTKKHNVDLLRMFGAKSIRVRRKEGEQGVVEYNFEVPTEPGSSFPAGNR 477          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5JMA8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JMA8_9PHAE)

HSP 1 Score: 470 bits (1209), Expect = 1.960e-156
Identity = 250/379 (65.96%), Postives = 290/379 (76.52%), Query Frame = 2
Query:  227 ETASETAKHEQREQKLVEA--AAHAAQQSKLSQAAHTFIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVK 1357
            E A   A  E REQ+ VE   AA AA   K++Q    ++D SV ++KP+ GEV   LQS+++LMLLF LRK G SE ++VL+V  TFKIGH KVR +N HWW +  L ETT  GRGK  K DDGRRRLT+ QEDQL + INDEHKAGRQVFRRTVAEWM   CN + + SN + GGLL RLG  RR GRIKTPPL A+RLARIR FLVEM +AKRAEDAGLAV+VY+DESFVHQAHGS YSYFP+D++GVV+DG+GRTTGKGLRMIMVHAITKWGPL         PIEEGWFK  E G GK+      M DE+T EFLWQ  LAKGDYHAAMTD+MFMEWL+HRL+PA+NA PEF+GK+M+LV D ASYHH FD+EVK
Sbjct:  113 EMARAAAPREMREQQDVERVQAAAAAAAEKVAQGLD-YMDTSVHEVKPKKGEVWTQLQSRMVLMLLFDLRKGGCSEKEAVLKVARTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTEVQEDQLREFINDEHKAGRQVFRRTVAEWMHRTCNME-QPSNGSAGGLLSRLGCKRRRGRIKTPPLKAERLARIRRFLVEMVMAKRAEDAGLAVIVYVDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGLPIEEGWFK--ETGSGKK-----EMEDEETVEFLWQATLAKGDYHAAMTDSMFMEWLEHRLSPAYNAIPEFKGKRMVLVLDYASYHHGFDAEVK 480          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KDX2_9PHAE (Uncharacterized protein n=8 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KDX2_9PHAE)

HSP 1 Score: 469 bits (1207), Expect = 3.300e-154
Identity = 257/423 (60.76%), Postives = 306/423 (72.34%), Query Frame = 2
Query:  254 EQREQKLVEAAAHAAQQSKLSQAAHTFIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENG--RGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            E+REQ  V  AA AA  SKL   A  F++DSV  L+P+TGE+    QS++ILML F L K G SEN +  QV  T +IG  KV  V   W+    L ET G+GRGK T  DDGRR +T++QED L + I  EH+AGRQVFRRTV +++   C+   E+SN AVGGLLQRLG+ RR GRIK PPL+ +R  RIRLFLV+MD+AKRAEDAG+AV+VYMDESFVHQAHGSAYSYFP+D+ G+V+DG+GRTTGKGLRMIMVHAIT+ GPL        FPI EGWFK KEN   + K G  DF M+DE+TAEFLWQ KLA GDYH AMTD MFM+WL HRLTPAF+A  +F+ KKM LV DNASYHH FD EVKVPETN+K YNV LLRKYG  +  + R +  G   E+ FEVP +   S P+A R
Sbjct:   58 ERREQDRVSKAAEAAT-SKLPPLALKFVEDSVQSLRPKTGELTTLQQSRIILMLYFDLVKGGSSENHAKEQVAKTLRIGTDKVLAVRTLWYDKQELYETNGKGRGKATSVDDGRRVITKEQEDGLREFIKGEHEAGRQVFRRTVKDYL--ECSFGLEMSNRAVGGLLQRLGFKRRRGRIKIPPLNEERKNRIRLFLVKMDLAKRAEDAGIAVIVYMDESFVHQAHGSAYSYFPSDDKGIVQDGIGRTTGKGLRMIMVHAITEHGPLAE--LQEGFPIREGWFKAKENRAKKIKPGEADFEMSDEQTAEFLWQAKLATGDYHNAMTDGMFMQWLKHRLTPAFDA--QFKNKKMFLVLDNASYHHCFDEEVKVPETNSKKYNVELLRKYGCTSFKVTRES-EGKAAEYNFEVPAQ--GSLPNANR 470          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KF49_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KF49_9PHAE)

HSP 1 Score: 450 bits (1158), Expect = 2.310e-148
Identity = 238/397 (59.95%), Postives = 293/397 (73.80%), Query Frame = 2
Query:  332 FIDDSVDKLKPRTGEVLCNLQSKLILMLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQ--VFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            ++++S +++KP+TG  LC  QS++IL+LL +LRKDG SEN+++L+V+         ++D  +        L     G  +V ++      L  +++D         H+ GR   +  RT        C  +++ SN +VGGLL RLGY RR GRIKTP LDA RLARIR FLVEMDIAKRAEDAGLAV+VYMDESFVHQAHGS YSYFP+DE+GVV+DG+GRTTGKGLRMIMVHAITKWGPL        FPIEEGWFK K  G+GK+GGKDFN+ DE+TAEFLWQ KLAKGDYHAAMTD+MFMEWL+ RL+PA+NA P+F+GKKMILV DNASYH  FD+EVKVPETN K YNV LLR+YG  +I +KRAAANG V++ RFEVPT+ GS+ PDARR
Sbjct:  117 YLEESEERVKPKTGSTLCKTQSRMILLLLISLRKDGQSENEAILRVSG------EHIQDRPREGQTRQQPLV----GTPRVVRD-----HLRGERQD---------HEEGRPAALCHRT--------CGFEEQPSNRSVGGLLSRLGYKRRRGRIKTPRLDAARLARIRRFLVEMDIAKRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDEDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAK--LCDGFPIEEGWFKSKGGGKGKRGGKDFNLEDEETAEFLWQAKLAKGDYHAAMTDSMFMEWLERRLSPAYNAVPDFKGKKMILVRDNASYHQGFDAEVKVPETNTKKYNVELLRRYGVRSIKVKRAAANGRVVQQRFEVPTDEGSTLPDARR 479          
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Match: A0A6H5KRM6_9PHAE (DDE_3 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KRM6_9PHAE)

HSP 1 Score: 427 bits (1099), Expect = 4.840e-140
Identity = 234/424 (55.19%), Postives = 266/424 (62.74%), Query Frame = 2
Query:  461 LQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGEGRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHCNPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIAKRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGLRMIMVHAITKWGPL---------------------------------------------------VARGTNSDF---------------------PIEEGWFKRKENGRGKQGGKDFNMADEKTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMILVFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVMEHRFEVPTEPGSSFPDARR 1516
            +QV  TFKIGH KVR +N HWW +  L ETT  GRGK  K DDGRRRLT+               AGRQVFRRTVAEWM   CN + ++SN + GGLL RLGY RR GRIKTPPL+A+RLARIR FLVEMD+AKRAEDAGLAV+VYMDESFVHQAHGS Y YFP+DE+G V+DG+GRTTGKGLRMIMVHAITKWGPL                                                   + R T                         PIEEGWFK  E G GK+      M DE+TAE +WQ KLAKGDYHAAMTD+MFMEWL+HRL+PA+NA  EF+G +MILV DNASYHH FD+EVKVPETN K  NV LLR +GA  I ++R       +E+ FEVPTEPGSSFP   R
Sbjct:    9 VQVAHTFKIGHDKVRRINNHWWDHRQLYETTAVGRGKTAKKDDGRRRLTE---------------AGRQVFRRTVAEWMHRTCNME-QLSNRSAGGLLSRLGYKRRRGRIKTPPLNAERLARIRRFLVEMDMAKRAEDAGLAVIVYMDESFVHQAHGSPYPYFPSDEDGAVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEXRAEDAGLAVIVYMDESFVHQAHGSPYSYFPSDDDGVVQDGIGRTTGKGLRMIMVHAITKWGPLAKLCDGLPIEEGWFK--ETGSGKK-----EMEDEETAEIMWQAKLAKGDYHAAMTDSMFMEWLEHRLSPAYNAILEFKGNRMILVLDNASYHHGFDAEVKVPETNTKKQNVDLLRMFGAKPIRVRRKEGEQGSVEYNFEVPTEPGSSFPAGNR 409          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3317.8899.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LNM6_ECTSI6.230e-18670.38DDE_3 domain-containing protein n=3 Tax=Ectocarpus... [more]
A0A6H5KIM5_9PHAE1.480e-17269.60DDE_3 domain-containing protein n=4 Tax=Ectocarpus... [more]
A0A6H5KAU4_9PHAE1.110e-17169.84Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KKL0_9PHAE1.360e-17169.35DDE_3 domain-containing protein n=2 Tax=Ectocarpus... [more]
A0A6H5KDX7_9PHAE5.770e-16670.45DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]
A0A6H5JR41_9PHAE7.690e-16170.45DDE_3 domain-containing protein n=5 Tax=Ectocarpus... [more]
A0A6H5JMA8_9PHAE1.960e-15665.96Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KDX2_9PHAE3.300e-15460.76Uncharacterized protein n=8 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KF49_9PHAE2.310e-14859.95Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KRM6_9PHAE4.840e-14055.19DDE_3 domain-containing protein n=1 Tax=Ectocarpus... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3317contigH-paniculata_contig3317:13737..16338 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Hectar predicted targeting categoryother localisation
Exons3
Model size2030
Cds size1131
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3317.8899.1prot_H-paniculata_contig3317.8899.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3317 14167..15848 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930025.9843035-UTR-H-paniculata_contig3317:13736..138881622930025.9843035-UTR-H-paniculata_contig3317:13736..13888Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3317 13737..13888 +
1691481115.6928854-UTR-H-paniculata_contig3317:13736..138881691481115.6928854-UTR-H-paniculata_contig3317:13736..13888Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3317 13737..13888 +
1622930026.0085075-UTR-H-paniculata_contig3317:13909..141661622930026.0085075-UTR-H-paniculata_contig3317:13909..14166Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3317 13910..14166 +
1691481115.7033885-UTR-H-paniculata_contig3317:13909..141661691481115.7033885-UTR-H-paniculata_contig3317:13909..14166Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3317 13910..14166 +
1622930026.048529-UTR-H-paniculata_contig3317:15848..163381622930026.048529-UTR-H-paniculata_contig3317:15848..16338Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3317 15849..16338 +
1691481115.731009-UTR-H-paniculata_contig3317:15848..163381691481115.731009-UTR-H-paniculata_contig3317:15848..16338Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3317 15849..16338 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930026.0236356-CDS-H-paniculata_contig3317:14166..142231622930026.0236356-CDS-H-paniculata_contig3317:14166..14223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3317 14167..14223 +
1691481115.7134068-CDS-H-paniculata_contig3317:14166..142231691481115.7134068-CDS-H-paniculata_contig3317:14166..14223Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3317 14167..14223 +
1622930026.0368183-CDS-H-paniculata_contig3317:14774..158481622930026.0368183-CDS-H-paniculata_contig3317:14774..15848Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3317 14775..15848 +
1691481115.7232478-CDS-H-paniculata_contig3317:14774..158481691481115.7232478-CDS-H-paniculata_contig3317:14774..15848Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3317 14775..15848 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3317.8899.1

>prot_H-paniculata_contig3317.8899.1 ID=prot_H-paniculata_contig3317.8899.1|Name=mRNA_H-paniculata_contig3317.8899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp
MLLFALRKDGVSENQSVLQVTSTFKIGHSKVRDVNKHWWGNNTLLETTGE
GRGKVTKNDDGRRRLTQDQEDQLYKLINDEHKAGRQVFRRTVAEWMMEHC
NPDKEVSNSAVGGLLQRLGYWRRTGRIKTPPLDAKRLARIRLFLVEMDIA
KRAEDAGLAVLVYMDESFVHQAHGSAYSYFPTDENGVVEDGMGRTTGKGL
RMIMVHAITKWGPLVARGTNSDFPIEEGWFKRKENGRGKQGGKDFNMADE
KTAEFLWQTKLAKGDYHAAMTDTMFMEWLDHRLTPAFNANPEFRGKKMIL
VFDNASYHHDFDSEVKVPETNNKVYNVGLLRKYGAGAITMKRAAANGTVM
EHRFEVPTEPGSSFPDARRAVLAERR*
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mRNA from alignment at H-paniculata_contig3317:13737..16338+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3317.8899.1 ID=mRNA_H-paniculata_contig3317.8899.1|Name=mRNA_H-paniculata_contig3317.8899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2602bp|location=Sequence derived from alignment at H-paniculata_contig3317:13737..16338+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGGAAGACGGAGGGCAGGCACCAACCCACTGTTGGCGCCACTGACCG CCCGAGCAACGTGGCGAAAAGGGCCAAAACTGGTGCGGCGAGAGATGCTC AGGCTCTCGACAGAATAGGGTTCAGCTTGAGAAGCAGCAGGCAGCGCTAG CGGTGCTATAGGCGGACGTCGAGTCGAGGGAGAAAGCTGTCAAGGCGAAA GAGGCAGCAATTGCCAAGAAGGAGGCAAACAAAGAGCGCGTCGCTGCGAA ACAGCAAGCGAAACAGCAAAGCACGAACAGCGAGAGCAGAAGCTAGTCGA AGCGGCTGCTCACGCAGCACAGCAGTCGAAGCTTTCCCAGGCAGCCCACA CCTTCATCGACGACTCTGTGGACAAGCTGAAGCCTCGAACTGGCGAGGTC TTGTGCAATCTCCAGTCGAAGCTGATTCTCATGCTGTTGTTTGCTCTTCG CAAGGACGGCGTCTCTGAGAATCAATCGGTGCTTCAGGTCAGTACGAGTA CAGTCAGCAAGTGTATTAATATTGATATTACAAGTGTCTGCTTTGTATTG CTTAAAGTATACTGTACAGCAGCAGTTTTTGCGGCACGTTAATTCGAATC ATACGTCTTTTCGCGCCCTTTTCGGTGTTGCTGTTCATACACCTCTGAGT GTACAAGGTACTGCTGTCTGTACGAATACGGTTACACTGCTTACTGCTGT ACTATGCGCACCGCTGTTCGTACGGTTCGTAACACTGCTGTCTGTACGGT GCACACTGCTGTCCGCACAGTGCACACAGCTGCCTGTACGGTTGTGCACT ACTGTGTGTACCGTACAACAGTGAGTTCGCTGCTTCCCAAATCCTCACCA ATGTACCCACGGCGATAACGCTGTTACGAATGGCGCCGCATACGCATTTT CTTCCAAGGCTGTACGCTTTTAAACTTCTGCTCTCTGTTTGCACGGCTTG AGGTGTGCTGTCTTGGCAATTGCACTGACTCGACTCCCGTATGCCGATGC AATATGCGCTGCGCTCTGGCCAACTGAACGTCTGCCAGGTGACGAGTACC TTCAAGATCGGCCATTCGAAAGTCAGAGACGTCAACAAGCACTGGTGGGG CAACAACACTCTGTTGGAAACCACCGGCGAAGGAAGAGGCAAGGTCACCA AGAACGACGACGGCCGACGGCGTCTCACCCAAGATCAAGAGGACCAGCTT TACAAGCTTATCAACGACGAGCACAAAGCCGGTCGACAAGTCTTTCGCCG TACGGTGGCGGAGTGGATGATGGAGCACTGCAACCCAGATAAGGAGGTGT CAAACAGCGCGGTAGGAGGGTTGCTGCAGAGGCTCGGTTATTGGCGCCGT ACGGGCAGGATCAAAACACCCCCGTTGGATGCGAAGAGGCTCGCGCGTAT TCGTCTATTTCTCGTTGAAATGGACATTGCGAAAAGGGCAGAGGATGCGG GGCTGGCAGTTCTTGTGTACATGGATGAGAGTTTTGTCCACCAGGCGCAC GGTTCCGCGTATTCATACTTTCCTACTGACGAGAATGGGGTTGTAGAGGA TGGGATGGGTCGCACGACGGGGAAGGGCTTACGCATGATTATGGTGCATG CAATCACGAAGTGGGGTCCGTTGGTTGCGCGTGGTACCAATAGTGACTTT CCAATCGAAGAGGGTTGGTTTAAGCGTAAGGAAAACGGTAGGGGAAAGCA AGGGGGTAAGGACTTTAACATGGCAGATGAGAAAACAGCAGAGTTTCTGT GGCAGACCAAGTTGGCTAAGGGCGATTATCACGCGGCTATGACCGATACG ATGTTCATGGAGTGGCTTGATCACCGCCTTACCCCAGCTTTCAACGCTAA CCCTGAGTTCAGGGGCAAGAAGATGATCCTTGTTTTTGACAACGCCTCGT ACCATCATGATTTCGACTCGGAAGTCAAGGTACCGGAAACCAATAATAAG GTGTACAATGTCGGACTGTTGCGTAAGTATGGAGCGGGGGCAATCACGAT GAAGCGTGCCGCTGCCAACGGCACAGTTATGGAGCACCGCTTCGAGGTAC CAACAGAACCTGGTTCTTCGTTCCCCGATGCGAGGCGGGCGGTGCTAGCA GAGAGGAGGTAGCGTTGGCCACTCGAGAGTTTTTCCGCCTTTACTACCCT GAAAAGCTTGAGGGGCGGGTGGAGACGTTCATGCGGCAGAAGGGGTGGGA ATTGATTTGGACACCGCCTTACATGCCGTCTTTTCAGCCGATAGAGTTGT TTTGGCAGCATGGTAAGCAGTACGTGAGCTTCAACGTTCAAAGCTGAACG AGGTGTGGGAGCAGATTCGCAAAAGTTGGTACGGGGGCCCGACGTGGCCA CGGCAGGAGGGGGGGTGGAACGCAGCCGATTGTTCCAAGTTGATGGCGCA CGCCATTGGCGAGATGAACAAGTGGATCAAGGATTGTGATGGACTGCTTC GTGGTACGATAGGTAACCTTGGAGTTCCACAAGGGTATGATCAGGACGAT GTATCACGTGTGAACAAGGCCGATGATGATGGGTTGAGGGAGCAGTTGGA ACAGGATGACGATGAGTGGGATGTGGGGGACGACAACGATGAGATTGAGC CA
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Coding sequence (CDS) from alignment at H-paniculata_contig3317:13737..16338+

>mRNA_H-paniculata_contig3317.8899.1 ID=mRNA_H-paniculata_contig3317.8899.1|Name=mRNA_H-paniculata_contig3317.8899.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at H-paniculata_contig3317:13737..16338+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCTGTTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATCAATCGGT
GCTTCAGATGCTGTTGTTTGCTCTTCGCAAGGACGGCGTCTCTGAGAATC
AATCGGTGCTTCAGGTGACGAGTACCTTCAAGATCGGCCATTCGAAAGTC
AGAGACGTCAACAAGCACTGGTGGGGCAACAACACTCTGTTGGAAACCAC
CGGCGAAGGAAGAGGCAAGGTCACCAAGAACGACGACGGCCGACGGCGTC
TCACCCAAGATCAAGAGGACCAGCTTTACAAGCTTATCAACGACGAGCAC
AAAGCCGGTCGACAAGTCTTTCGCCGTACGGTGGCGGAGTGGATGATGGA
GCACTGCAACCCAGATAAGGAGGTGTCAAACAGCGCGGTAGGAGGGTTGC
TGCAGAGGCTCGGTTATTGGCGCCGTACGGGCAGGATCAAAACACCCCCG
TTGGATGCGAAGAGGCTCGCGCGTATTCGTCTATTTCTCGTTGAAATGGA
CATTGCGAAAAGGGCAGAGGATGCGGGGCTGGCAGTTCTTGTGTACATGG
ATGAGAGTTTTGTCCACCAGGCGCACGGTTCCGCGTATTCATACTTTCCT
ACTGACGAGAATGGGGTTGTAGAGGATGGGATGGGTCGCACGACGGGGAA
GGGCTTACGCATGATTATGGTGCATGCAATCACGAAGTGGGGTCCGTTGG
TTGCGCGTGGTACCAATAGTGACTTTCCAATCGAAGAGGGTTGGTTTAAG
CGTAAGGAAAACGGTAGGGGAAAGCAAGGGGGTAAGGACTTTAACATGGC
AGATGAGAAAACAGCAGAGTTTCTGTGGCAGACCAAGTTGGCTAAGGGCG
ATTATCACGCGGCTATGACCGATACGATGTTCATGGAGTGGCTTGATCAC
CGCCTTACCCCAGCTTTCAACGCTAACCCTGAGTTCAGGGGCAAGAAGAT
GATCCTTGTTTTTGACAACGCCTCGTACCATCATGATTTCGACTCGGAAG
TCAAGGTACCGGAAACCAATAATAAGGTGTACAATGTCGGACTGTTGCGT
AAGTATGGAGCGGGGGCAATCACGATGAAGCGTGCCGCTGCCAACGGCAC
AGTTATGGAGCACCGCTTCGAGGTACCAACAGAACCTGGTTCTTCGTTCC
CCGATGCGAGGCGGGCGGTGCTAGCAGAGAGGAGGTAGGTGACGAGTACC
TTCAAGATCGGCCATTCGAAAGTCAGAGACGTCAACAAGCACTGGTGGGG
CAACAACACTCTGTTGGAAACCACCGGCGAAGGAAGAGGCAAGGTCACCA
AGAACGACGACGGCCGACGGCGTCTCACCCAAGATCAAGAGGACCAGCTT
TACAAGCTTATCAACGACGAGCACAAAGCCGGTCGACAAGTCTTTCGCCG
TACGGTGGCGGAGTGGATGATGGAGCACTGCAACCCAGATAAGGAGGTGT
CAAACAGCGCGGTAGGAGGGTTGCTGCAGAGGCTCGGTTATTGGCGCCGT
ACGGGCAGGATCAAAACACCCCCGTTGGATGCGAAGAGGCTCGCGCGTAT
TCGTCTATTTCTCGTTGAAATGGACATTGCGAAAAGGGCAGAGGATGCGG
GGCTGGCAGTTCTTGTGTACATGGATGAGAGTTTTGTCCACCAGGCGCAC
GGTTCCGCGTATTCATACTTTCCTACTGACGAGAATGGGGTTGTAGAGGA
TGGGATGGGTCGCACGACGGGGAAGGGCTTACGCATGATTATGGTGCATG
CAATCACGAAGTGGGGTCCGTTGGTTGCGCGTGGTACCAATAGTGACTTT
CCAATCGAAGAGGGTTGGTTTAAGCGTAAGGAAAACGGTAGGGGAAAGCA
AGGGGGTAAGGACTTTAACATGGCAGATGAGAAAACAGCAGAGTTTCTGT
GGCAGACCAAGTTGGCTAAGGGCGATTATCACGCGGCTATGACCGATACG
ATGTTCATGGAGTGGCTTGATCACCGCCTTACCCCAGCTTTCAACGCTAA
CCCTGAGTTCAGGGGCAAGAAGATGATCCTTGTTTTTGACAACGCCTCGT
ACCATCATGATTTCGACTCGGAAGTCAAGGTACCGGAAACCAATAATAAG
GTGTACAATGTCGGACTGTTGCGTAAGTATGGAGCGGGGGCAATCACGAT
GAAGCGTGCCGCTGCCAACGGCACAGTTATGGAGCACCGCTTCGAGGTAC
CAACAGAACCTGGTTCTTCGTTCCCCGATGCGAGGCGGGCGGTGCTAGCA
GAGAGGAGGTAG
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