mRNA_H-paniculata_contig3312.8891.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: D7FJL1_ECTSI (RNA helicase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FJL1_ECTSI) HSP 1 Score: 878 bits (2268), Expect = 1.470e-310 Identity = 449/509 (88.21%), Postives = 474/509 (93.12%), Query Frame = 2
Query: 524 ELVKTGFFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
+LVKTGFFS +F+ LPLS M +AL KL F TTKIQAQAIPPLL+GED+VGAAKTGSGKTLAFLVPVLE LHKVKWSHRNGTACIIISPTRELSLQTYGVLRD +E G++KQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNT+GFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSI+ KPVYVGVDDAEQESTVDGLEQGYVVCPS+KRFLLLFTFLKKNR KKIMVFFSSCNSVKFHSELLNYID+PVMDIHGRQKQQKRTTSFFQFC+Q++GVLLCTDVAARGLDIP+VDWIIQ+DPPDQTAEYIHRVGRTARGQSG+GRALLFLLPEEVGFLRYLR AKAKLNEYEFPVKKVANVQ+QLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLK+IYDVHELDLQAV+RAFGFTVPPRVDLKLSARGQKGRGG H+FSATNPYG+KA GD+RQFTH
Sbjct: 137 QLVKTGFFSDVEFSTLPLSSGMLSALAKLNFVMTTKIQAQAIPPLLAGEDMVGAAKTGSGKTLAFLVPVLECLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDVIENGNLKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTKGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIRNKPVYVGVDDAEQESTVDGLEQGYVVCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDMPVMDIHGRQKQQKRTTSFFQFCKQDTGVLLCTDVAARGLDIPAVDWIIQFDPPDQTAEYIHRVGRTARGQSGKGRALLFLLPEEVGFLRYLRTAKAKLNEYEFPVKKVANVQSQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKDIYDVHELDLQAVARAFGFTVPPRVDLKLSARGQKGRGGGKERDQGRRKMAVGGGG-HSFSATNPYGQKAPGDRRQFTH 644
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: A0A835ZG10_9STRA (RNA helicase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZG10_9STRA) HSP 1 Score: 798 bits (2060), Expect = 3.030e-278 Identity = 415/553 (75.05%), Postives = 459/553 (83.00%), Query Frame = 2
Query: 395 DDAAEAVVPGSKKVKKGDGVSPKMEKTAEGDKEKITIAVNEGPELVKTGFFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAG--DMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFT 2047
++A AV P K+ S K E + A K GFFS E+F LPLS + AL L F T TKIQAQAIPPLLSG+DLVGAAKTGSGKTLAFL+PVLE+L KV W R GTAC++ISPTRELSLQTYGVLRD EAG + THGLLIGGANRRAEAERL+KGV +LVVTPGRLLDHLQNT+GF+F NMQMLVIDEADRILEQGFEEEMHQIIK+LP+ERQTMLFSATQTKKVEDLARLSI+ KP+YVGVDDAEQESTV+GLEQGYVVCPSEKRFLLLFTFLKKNRNKK+MVFFSSCNSV +H+ELLNYIDIPVM+IHGRQKQQKRTT+FFQFCRQ +G+LLCTDVAARGLDIP+VDWIIQYDPPDQTAEYIHRVGRTARG +G GRALLFLLP+EVGFLRYLRAAK LNEYEFP KVANVQ+QLSRL+EKNYYLNKSAR+AYRSYLLAY+SHSLK +Y+VHELDLQAV++AFGFTVPPRVDL LSA+G KGR HAFSA+NPYG+K GD+RQF+
Sbjct: 150 EEAPPAVKPSKKRPHDAVSKSGAKAKAGENGAGQAAPAAAASGSTGKKGFFSEERFDSLPLSAGTQAALKDLNFVTMTKIQAQAIPPLLSGQDLVGAAKTGSGKTLAFLLPVLEMLEKVMWGGRQGTACVVISPTRELSLQTYGVLRDLCEAGAGGGRHTHGLLIGGANRRAEAERLMKGVAILVVTPGRLLDHLQNTKGFVFHNMQMLVIDEADRILEQGFEEEMHQIIKILPRERQTMLFSATQTKKVEDLARLSIRDKPIYVGVDDAEQESTVEGLEQGYVVCPSEKRFLLLFTFLKKNRNKKVMVFFSSCNSVNYHAELLNYIDIPVMNIHGRQKQQKRTTTFFQFCRQETGILLCTDVAARGLDIPAVDWIIQYDPPDQTAEYIHRVGRTARGSTGAGRALLFLLPQEVGFLRYLRAAKVTLNEYEFPAHKVANVQSQLSRLVEKNYYLNKSARDAYRSYLLAYASHSLKTLYNVHELDLQAVAKAFGFTVPPRVDLNLSAKGAKGR-------VKTVNKGKRDSSGHAFSASNPYGKKKDGDRRQFS 695
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: W7U0G2_9STRA (RNA helicase n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0G2_9STRA) HSP 1 Score: 735 bits (1898), Expect = 3.830e-253 Identity = 370/502 (73.71%), Postives = 425/502 (84.66%), Query Frame = 2
Query: 542 FFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFT 2047
FF+ + F DLP+SD + AL +L F T IQ+ AIPPLL+G+D+V AAKTGSGKTLAFLVPV+ELL KVKW+ RNGT IIISPTRELS+Q YGVLRD + G THGL++GGANRRAEAERLVKGV++LV TPGRLLDHLQNT+GFL RN+Q+LVIDEADRILEQGFEE+MHQIIK LPK RQTMLFSATQTKKVEDL RLS++ +PV+VG + +TV GLEQGYVVCPS+KRFLLLFTFLK+N+ +KIMVFFSSCNSVKFH+ELLNYID+PVMDIHGRQKQQ+RTT+FFQFCRQ+ G+LLCTDVAARGLDIP+VDWIIQYDPPD EYIHRVGRTARG +G+GRALLFL EEVGFL+YLRAAK LNEYEFP KKVANVQAQL++L+EKNYYLNKSAR+AYRSYLLAY+SHS K+I++VHELDLQAV+RAFGF+VPPRVD+ LS++G KGR H FSA NPYGR+ AGD RQFT
Sbjct: 241 FFANQPFEDLPISDATKCALKRLRFVNMTHIQSLAIPPLLAGKDVVAAAKTGSGKTLAFLVPVVELLSKVKWAARNGTGAIIISPTRELSMQIYGVLRDLCDEGGHPLTHGLIMGGANRRAEAERLVKGVSILVATPGRLLDHLQNTKGFLTRNLQLLVIDEADRILEQGFEEDMHQIIKSLPKHRQTMLFSATQTKKVEDLTRLSMQGRPVFVGAHEEAAVATVGGLEQGYVVCPSDKRFLLLFTFLKRNKQRKIMVFFSSCNSVKFHAELLNYIDLPVMDIHGRQKQQRRTTTFFQFCRQDKGILLCTDVAARGLDIPAVDWIIQYDPPDDPREYIHRVGRTARGAAGKGRALLFLTAEEVGFLKYLRAAKVALNEYEFPEKKVANVQAQLTKLVEKNYYLNKSARDAYRSYLLAYASHSHKDIFNVHELDLQAVARAFGFSVPPRVDINLSSKGPKGR------LKNTHKDKRFGSTGHKFSANNPYGRREAGDSRQFT 736
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: A0A7S1XXW2_9STRA (RNA helicase n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXW2_9STRA) HSP 1 Score: 709 bits (1831), Expect = 6.990e-246 Identity = 361/504 (71.63%), Postives = 419/504 (83.13%), Query Frame = 2
Query: 533 KTGFFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQF 2044
+ GFFS F+ L LS+ AL + + TKIQA++IPPLL+G+DL+GAAKTGSGKTLAFLVP +ELL +V+++ RNGT I+ISPTREL+LQ YGVLR+ E + QTHGL+IGGANRR EAE+L KGVN+LV TPGRLLDHLQNTRGF FRN+QMLVIDEADRILEQGFEE+MH IIK LPK RQT+LFSATQT+KVEDLARLSI+ PVYVGVDD ++ STV GLEQGYVVCPS RFLLLFTFLKKNR +K+MVFFSSCN+VK+H+ELLNYID+PVMDIHGRQKQQ+RT++FFQFC+ ++G+LLCTDVAARGLDIP+VDWI+QYDPPDQ AEYIHRVGRTARG SG GRALLFL PEEVGFLRYLR AK LNEYEFP KVANVQ QL RL+E+NYYLNKSAREAYRSYLLAY+SH+ K+I++VH LDL A +++FGFTVPPRVDL SARG + R HAFSA NPYG++A GD+RQF
Sbjct: 51 RPGFFSKAAFSSLDLSEGTARALAENGYERMTKIQAKSIPPLLTGKDLLGAAKTGSGKTLAFLVPAVELLSRVRFTTRNGTGVIVISPTRELALQIYGVLRELCEHHN--QTHGLVIGGANRRTEAEKLAKGVNILVATPGRLLDHLQNTRGFNFRNLQMLVIDEADRILEQGFEEDMHAIIKTLPKTRQTVLFSATQTRKVEDLARLSIEGDPVYVGVDDGDRVSTVQGLEQGYVVCPSANRFLLLFTFLKKNRKRKVMVFFSSCNAVKYHAELLNYIDVPVMDIHGRQKQQRRTSTFFQFCKADTGILLCTDVAARGLDIPAVDWIVQYDPPDQPAEYIHRVGRTARGPSGDGRALLFLAPEEVGFLRYLRKAKVALNEYEFPTSKVANVQNQLERLVERNYYLNKSAREAYRSYLLAYASHADKDIFNVHNLDLVATAKSFGFTVPPRVDLNFSARGDRKRA---RNAKGGDKKKRQKASGHAFSADNPYGQRAKGDRRQF 549
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: B8BY61_THAPS (RNA helicase n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B8BY61_THAPS) HSP 1 Score: 691 bits (1783), Expect = 3.780e-239 Identity = 350/498 (70.28%), Postives = 407/498 (81.73%), Query Frame = 2
Query: 560 FADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIK-KKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
FA LPLSD + AL+ + FT T+IQA +IP LLSG+DL+GAAKTGSGKTLAFL+PV+ELLH K+ RNGT I+ISPTREL++Q YGV +D +G QT+GL+IGGANRR EAERL KGVN+++ TPGRLLDHLQNT+GF+FRN+ V+DEADRILEQGFE+++ IIK LPK+RQTMLFSATQTKKVEDLAR +I K VYV V + +T GLEQGYV PS++RFLLLFTFLKKN+NKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFC+Q +G LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG+ G+GRALLFL PEE GFLRYL+AAK LNEYEFP+ K+ANVQ+QL RLIEKNYYLN +AR+AYRSYLLAY+SHSL++I+DVH LDL AV RAFGFT PPRVDL S +G K R H+FSA+NPYGRK +GD+RQF+H
Sbjct: 22 FASLPLSDLTQNALSAMGFTRMTQIQAMSIPALLSGKDLIGAAKTGSGKTLAFLLPVVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCTSGKHHQTYGLIIGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRSIIKALPKQRQTMLFSATQTKKVEDLARTAIDPKSAVYVEVPNETNLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGEKGKGRALLFLTPEETGFLRYLKAAKVTLNEYEFPMTKLANVQSQLQRLIEKNYYLNCAARDAYRSYLLAYTSHSLRDIFDVHSLDLAAVGRAFGFTAPPRVDLAFSVKGPKARR-HNGQVMNGKGKNGKLANGHSFSASNPYGRKESGDKRQFSH 518
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: A0A6T7F7A1_9STRA (RNA helicase n=1 Tax=Attheya septentrionalis TaxID=420275 RepID=A0A6T7F7A1_9STRA) HSP 1 Score: 691 bits (1783), Expect = 1.410e-237 Identity = 352/525 (67.05%), Postives = 417/525 (79.43%), Query Frame = 2
Query: 485 DKEKITIAVNEGPELVKTGFFSGEK--FADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKP-VYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
+KE+ +G + K F+ + F LPLS+ + AL +EFT T+IQ+++IP LLSG+DL+GAAKTGSGKTLAFL+PV+ELLHK ++S RNGT IIISPTREL++Q YGV RD AG QT+GL+IGGANRR EAERL KGVN++V TPGRLLDHLQNT+GF+FRN+ V+DEADRILEQGFE+++ I+KLLPKERQTMLFSAT TKKVEDLAR+SI +K +YV V + +T GLEQGYV C SEKRFLLLFTFLKKN+NKKIMVFFSSCNSVK+H ELLNYID+PVMDIHGRQKQ KRTT+FFQFC+ G LLCTDVAARGLDIPSVDWIIQ+DPPD EYIHRVGRTARG +G GRAL+FL PEE GFLRYL+AA+ LNEYEFP +KV+NVQ+QL RLIEKNYYLN++AR+AYRSYLLAY+SHS ++I+ VHELDLQAV AFGFT PPRVDL SA+G K +G H FSA+NPYG++ GD+RQF+H
Sbjct: 95 EKEEDDAKKPKGGDGDKPNFYDDQSATFDSLPLSEPTKLALASMEFTRMTQIQSKSIPALLSGKDLIGAAKTGSGKTLAFLIPVIELLHKARFSTRNGTGAIIISPTRELAMQIYGVCRDLCTAGKHSQTYGLVIGGANRRTEAERLAKGVNIMVATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEDDLRCILKLLPKERQTMLFSATNTKKVEDLARVSINQKTAIYVEVASETKLATAAGLEQGYVTCESEKRFLLLFTFLKKNKNKKIMVFFSSCNSVKYHGELLNYIDVPVMDIHGRQKQVKRTTTFFQFCKAKKGTLLCTDVAARGLDIPSVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALIFLTPEETGFLRYLKAARVTLNEYEFPTQKVSNVQSQLQRLIEKNYYLNRAARDAYRSYLLAYASHSNRDIFSVHELDLQAVGLAFGFTTPPRVDLAFSAKGDKVKGRHNGSKLKGDPKSKGLSNGHDFSASNPYGKRPKGDKRQFSH 619
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: A0A7S2PMU9_9STRA (RNA helicase n=1 Tax=Skeletonema marinoi TaxID=267567 RepID=A0A7S2PMU9_9STRA) HSP 1 Score: 689 bits (1779), Expect = 2.990e-237 Identity = 346/512 (67.58%), Postives = 414/512 (80.86%), Query Frame = 2
Query: 533 KTGFFSG-----EKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIK-KKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
K F++G ++F+ LPLS+ +TAL+ + FT T+IQA +IPPLL+G+DL+GAAKTGSGKTLAFL+P++ELLH K+ RNGT I+ISPTREL++Q YGV +D +G +QT+GL++GGANRR EAERL KGVN+++ TPGRLLDHLQNT+GF+FRN+ V+DEADRILEQGFEE++ IIK LPK+RQTMLFSATQTKKVEDLAR +I K +YV V + +T GLEQGYV PS++RFLLLFTFLKKN+NKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQFC+Q +G LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG G GRALLFL PEE GFLRYL+ AK LNEYEFP+KK++NVQ+QL RLIEKNYYLN +AR+AYRSYLLAY+SHSL++I++VHELDL AV RAFGFT PPRVDL S +G K R H+FS +NPYG++ GD+RQF+H
Sbjct: 90 KPNFYAGKDGADDRFSTLPLSENTQTALSAMGFTRMTQIQAMSIPPLLAGKDLIGAAKTGSGKTLAFLLPIVELLHNAKFGSRNGTGAIVISPTRELAMQIYGVCKDLCSSGKHQQTYGLIMGGANRRTEAERLAKGVNIVIATPGRLLDHLQNTKGFVFRNLLAFVMDEADRILEQGFEEDLRAIIKALPKQRQTMLFSATQTKKVEDLARTAIDHKSAIYVEVPNETSLATAAGLEQGYVTVPSDQRFLLLFTFLKKNKNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFCKQTTGTLLCTDVAARGLDIPAVDWIIQFDPPDDPKEYIHRVGRTARGDKGTGRALLFLTPEETGFLRYLKVAKVTLNEYEFPMKKLSNVQSQLQRLIEKNYYLNCAARDAYRSYLLAYASHSLRDIFNVHELDLAAVGRAFGFTAPPRVDLAFSMKGGKDRRHNGQVAKGGKGKTGKLSNGHSFSGSNPYGKRDRGDKRQFSH 601
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: A0A329RG91_9STRA (RNA helicase n=10 Tax=Peronosporaceae TaxID=4777 RepID=A0A329RG91_9STRA) HSP 1 Score: 687 bits (1774), Expect = 1.320e-236 Identity = 345/519 (66.47%), Postives = 420/519 (80.92%), Query Frame = 2
Query: 497 ITIAVNEGPELVKTGFFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKG-RGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
IT A N V +FS E+FA LPLS+ R AL + FT TKIQ+++I PLL+G+DL+GAAKTGSGKTL+FL+P +ELLHKV+++ R GT CI+ISPTREL+LQ YGV+RD + QTHG+++GGANRRAEAERLVKGVN+L+ TPGRLLDHLQNT+ F++ N+Q+LVIDEADRIL GFEEEM QIIK +PKERQTMLFSATQTKKVEDLARLSIK+KPVYVGV++ + ++TV LEQGYVV PS+KRFLLLFTFLKKN KK+MVFFSSC +VKF+ ELLNYIDIPV+DIHG+QKQ KRTT+FFQFC +G+LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG G+G+ALL LLP+E+GFL+YL+A+K LNEYEFPV K+ANV++QL +L+EK YYL+KSA++AYR YLLAY+SHSLK I+DV LDLQ V+++FG VPP+V L + G+ G R G HAFSA NPYG++A+GD+RQF H
Sbjct: 78 ITDATNLAESTVDERYFSSEEFASLPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAVELLHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCTAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKGIFDVGRLDLQGVAKSFGLQVPPKVTLPVKTNGKTGKRKGTSFDNDGSSRGGKFQRSGHAFSADNPYGKRASGDKRQFAH 594
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: A0A7S2KTK2_9STRA (RNA helicase n=1 Tax=Leptocylindrus danicus TaxID=163516 RepID=A0A7S2KTK2_9STRA) HSP 1 Score: 687 bits (1772), Expect = 1.500e-236 Identity = 351/520 (67.50%), Postives = 412/520 (79.23%), Query Frame = 2
Query: 491 EKITIAVNEGPELVKTGFFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKGRGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
EK T + +E P G F LPL+D + AL +L FT T+IQAQ+IP LL+G+D+VGAAKTGSGKTLAFL+PV+ELL K K++ R GT I+ISPTRELSLQ YGVLRD + +G QTHGL+IGGANR+ EA++L KGVN+L+ TPGRLLDHLQNT F++ NM LVIDEADRILEQGFEE+M I++LLPK+RQTMLFSATQTKKVEDLARLSI+ VYV V + +T GLEQG+V CPS+KRFLLLFTFLKKNR KKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTT+FFQF + +G LLCTDVAARGLDIP VDWIIQ+DPPD EYIHRVGRTARG +G GRALLFL PEE GFL+YL+AAK LNEYEFPV KVANVQ+QL LIEKNYYLN+SAR+AYRSYLLAY+SHS K+I++VH++DLQ + AFGFT PPRVD+ + +G++GR HAFSA+NP+G + GD+RQF+H
Sbjct: 63 EKATESSSEKPNFFAHSDDKG-LFTALPLTDATQKALAELSFTRMTQIQAQSIPSLLAGKDIVGAAKTGSGKTLAFLIPVIELLFKAKFTTRRGTGAIVISPTRELSLQIYGVLRDLITSGGHNQTHGLIIGGANRKTEADKLGKGVNILIATPGRLLDHLQNTSRFVYHNMLCLVIDEADRILEQGFEEDMRAILRLLPKQRQTMLFSATQTKKVEDLARLSIQSSAVYVEVASETKLATAAGLEQGFVTCPSDKRFLLLFTFLKKNRKKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTTFFQFMKDKTGTLLCTDVAARGLDIPEVDWIIQFDPPDDPKEYIHRVGRTARGATGSGRALLFLTPEETGFLKYLQAAKVTLNEYEFPVSKVANVQSQLQNLIEKNYYLNRSARDAYRSYLLAYASHSHKDIFNVHQMDLQGAATAFGFTTPPRVDVAFNVKGERGR---KQGNRKHDPKTQGMSNGHAFSASNPFGERQKGDKRQFSH 578
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Match: M4C3A2_HYAAE (RNA helicase n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4C3A2_HYAAE) HSP 1 Score: 682 bits (1760), Expect = 3.020e-234 Identity = 338/504 (67.06%), Postives = 415/504 (82.34%), Query Frame = 2
Query: 542 FFSGEKFADLPLSDCMRTALTKLEFTTTTKIQAQAIPPLLSGEDLVGAAKTGSGKTLAFLVPVLELLHKVKWSHRNGTACIIISPTRELSLQTYGVLRDFVEAGDMKQTHGLLIGGANRRAEAERLVKGVNVLVVTPGRLLDHLQNTRGFLFRNMQMLVIDEADRILEQGFEEEMHQIIKLLPKERQTMLFSATQTKKVEDLARLSIKKKPVYVGVDDAEQESTVDGLEQGYVVCPSEKRFLLLFTFLKKNRNKKIMVFFSSCNSVKFHSELLNYIDIPVMDIHGRQKQQKRTTSFFQFCRQNSGVLLCTDVAARGLDIPSVDWIIQYDPPDQTAEYIHRVGRTARGQSGQGRALLFLLPEEVGFLRYLRAAKAKLNEYEFPVKKVANVQAQLSRLIEKNYYLNKSAREAYRSYLLAYSSHSLKNIYDVHELDLQAVSRAFGFTVPPRVDLKLSARGQKG-RGGXXXXXXXXXXXXXXXXXXHAFSATNPYGRKAAGDQRQFTH 2050
+FSGE FA LPLS+ R AL + FT TKIQ+++I PLL+G+DL+GAAKTGSGKTL+FL+P +EL+HKV+++ R GT CI+ISPTREL+LQ YGV+RD + QTHG+++GGANRRAEAERLVKGVN+L+ TPGRLLDHLQNT+ F++ N+Q+LVIDEADRIL GFEEEM QIIK +PKERQTMLFSATQTKKVEDLARLSIK+KPVYVGV++ + ++TV LEQGYVV PS+KRFLLLFTFLKKN KK+MVFFSSCN+VKF+ ELLNYIDIPV+DIHG+QKQ KRTT+FFQFC +G+LLCTDVAARGLDIP+VDWIIQ+DPPD EYIHRVGRTARG G+G+ALL LLP+E+GFL+YL+A+K LNEYEFPV K+ANV++QL +L+EK YYL+KSA++AYR YLLAY+SHSLK+I+DV LDLQ V+++FG +PP+V L + G+ G R G H+FSA NPYG++ GD+RQF H
Sbjct: 109 YFSGEDFAALPLSEPTRKALADMGFTKMTKIQSKSIRPLLAGQDLLGAAKTGSGKTLSFLIPAIELMHKVRFTARKGTGCIVISPTRELALQIYGVVRDICKYHS--QTHGIVMGGANRRAEAERLVKGVNILISTPGRLLDHLQNTKAFIYHNLQILVIDEADRILSIGFEEEMRQIIKCIPKERQTMLFSATQTKKVEDLARLSIKEKPVYVGVEEEDTKATVATLEQGYVVTPSDKRFLLLFTFLKKNLKKKVMVFFSSCNAVKFYGELLNYIDIPVLDIHGKQKQNKRTTTFFQFCNAKTGILLCTDVAARGLDIPAVDWIIQFDPPDDPREYIHRVGRTARGAKGKGKALLMLLPDELGFLKYLKASKVALNEYEFPVSKIANVESQLMKLVEKTYYLHKSAKDAYRGYLLAYASHSLKSIFDVGRLDLQGVAKSFGLQIPPKVTLPVKTNGKTGKRKGQSFDNDGSARGGKFQRSGHSFSADNPYGKRVVGDKRQFVH 610 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3312.8891.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3312.8891.1 >prot_H-paniculata_contig3312.8891.1 ID=prot_H-paniculata_contig3312.8891.1|Name=mRNA_H-paniculata_contig3312.8891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=659bp MKKKSARKKSAKVVGRVGGGKGVAVGVKQELNGDQKAIAKRLAQSQRGSEback to top mRNA from alignment at H-paniculata_contig3312:6614..16672+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3312.8891.1 ID=mRNA_H-paniculata_contig3312.8891.1|Name=mRNA_H-paniculata_contig3312.8891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10059bp|location=Sequence derived from alignment at H-paniculata_contig3312:6614..16672+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3312:6614..16672+ >mRNA_H-paniculata_contig3312.8891.1 ID=mRNA_H-paniculata_contig3312.8891.1|Name=mRNA_H-paniculata_contig3312.8891.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3954bp|location=Sequence derived from alignment at H-paniculata_contig3312:6614..16672+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |