mRNA_H-paniculata_contig33107.8887.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A0C3PIV1_PISTI (Uncharacterized protein (Fragment) n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3PIV1_PISTI) HSP 1 Score: 152 bits (385), Expect = 1.870e-37 Identity = 109/328 (33.23%), Postives = 154/328 (46.95%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQ------------RSTTHPR-----------------------------------------LYSSRDEAGETDILVAGYVDDLVIAGCR-EKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRG-----------RSGNSSE------------YRGMVGSLVYASTGTRPDIAYAI 744
EP S EA + P+ +W ++EE L + GTW LP G ++ +KW+F+ K +V R+KA L+AQ FSQVEG D+F+T APVA ++ R V ++AA+ + EL +DI ++L L S HP+ +Y R GE I+V +VDD IA +++EFK +I + + DLG L +LGIEV R+R + IS+ Q YI I +R+GFDE + SG S YR VGSL+YAS TRPDI+YA+
Sbjct: 806 EPSSLAEARRHPDWPRWEEGIREELDTLKEAGTWELVDLPSGANIVGSKWVFRAKKDAAGNVVRYKARLVAQGFSQVEGIDYFDTFAPVATLASIRVVLAMAARSNLELHQIDIKGAYLNGTLTDDEVIYMRQPPGFESVDHPQKVCRLRKTLYGLKQSGCRWYQRLVEILVDELKFTHCSVDQAVYFRRRSTGELIIIVV-HVDDCTIAATLLSEIEEFKKDIRKHVEITDLGELHWLLGIEVTRNRDDRAISLCQRPYIESIIRRFGFDELKPVSNPMEPSTKLHSGQSPSTGAEFAAMKHIPYREAVGSLMYASLSTRPDISYAV 1132
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR) HSP 1 Score: 152 bits (385), Expect = 1.900e-37 Identity = 107/341 (31.38%), Postives = 161/341 (47.21%), Query Frame = 1
Query: 4 EPKSATEALKSPEADK-WPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQ---------------------------------------------------RSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREK-VDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS---------------GNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFSTCTPFF 810
EP+S EA+ P K W AA++EE+ +L +NG W LP + ++ KW+FK K + ++ RFKA L+A+ FSQ G D+FET APVA ++ +RT+F+LAA +E+ GMD+ ++L L + RS P LY + + + +VDDL+I G + + K ++ +KDLG L LG+ + R NG+ISI Q GYIR+I +R+G + + S N +Y+ MVGSL+YA +RPD+AYAI Q ++ +P F F
Sbjct: 896 EPQSYEEAVNHPIYGKEWIAAIREEYNSLMRNGAWELVELPSDKNLVTCKWVFKAKHDANGNIVRFKARLVARGFSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQKIHAFLIKLGFVRSNADPCLYIKKF------LYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSL-NGSISIDQNGYIRQILERFGMEASKPVSTPIATGTRLVIGETESNIKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQAAKRVF 1229
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A146IJ40_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IJ40_MYCCL) HSP 1 Score: 149 bits (376), Expect = 1.600e-36 Identity = 106/337 (31.45%), Postives = 157/337 (46.59%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDI------------DASFLTPPL----------------------------------------LQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREK-VDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS-----------------------GNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
EP++ EA +SP+ W A++EE L KNGTW P ++ KW+F+ K V R+KA L+AQ FSQVEG D+F+T APVA + RT+ +LAA+ D EL +D+ + F+ PL L R +T ++ +D G +++A +VDD I G V+E K +R + DLG + +LGIEV+R+R T+S+SQ YI+ I +RY D+ + S S Y+ VGSL+YAS GTRPDI +A+ + ++ +P
Sbjct: 190 EPRNLAEAKRSPDWPHWEKAIREELEMLEKNGTWELADAPHHANIVGNKWVFRIKRDAAGRVVRYKARLVAQGFSQVEGVDYFDTFAPVARLGSVRTILALAARLDLELHQIDVKGVYLNGELTDCERIFMRQPLGFPYPNSTGKVLRLVKMLYGLKQSGRRWYQRFAEICESMGLTRCSTDQAVFYHQDANGF--VVLAVHVDDCTIGGTNTALVNEMKSGFARYVEIVDLGEIHWLLGIEVKRNRQERTLSLSQTSYIQSIVRRYNLDDLKPLSIPMDPNVTLSSAQSPRTADELARMRSVPYKEAVGSLMYASLGTRPDITFAVTKLSKFSSNP 524
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A2G8S4Y9_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S4Y9_9APHY) HSP 1 Score: 147 bits (371), Expect = 1.370e-35 Identity = 110/348 (31.61%), Postives = 159/348 (45.69%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTWL----PIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLT-------------PPLLQRSTTHPR-------LY----SSR---------------------DEA------GETDILVAGYVDDLVIAG-CREKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRSG-----------------------NSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFSTCTPFF 810
+P S EA + PE +W AM+EE AL K+GTW P G ++ KW+F K +V+ ++A L+A+ FSQ+ G+DFF T AP+A TV + A + DFE+ +D+ +++L PP +Q S R LY S+R D+A G I++ +VDDL IA C + E K + + D G + +LG V RDR T+S+SQ YI I +RYG ++ + S + YR +VGSL YAS GTRPDI YA+ +R +E+P R + C F
Sbjct: 977 DPLSLAEARRRPEWPRWEQAMREELSALEKHGTWRLERPPPGTNIVDNKWVFHAKKDASGNVSGYRARLVARGFSQIPGQDFFNTYAPIARTPSMCTVLAFANREDFEIHQVDVKSAYLNGEFDDNEVIYMSMPPGVQLSDDPTRVLRLLRPLYGLCQSARHWHKKLRRVLEELLSMKACDVDQAVFYRIEGTDLIIIVAHVDDLTIAASCMALIVEVKTKLREAFEILDEGEIHWILGFAVIRDRAARTLSLSQTAYIEAIIRRYGLEDAKPLSMPMDPHVQLTAEQSPKTTAEVAEMRNVPYREVVGSLQYASMGTRPDITYAVSVLSRFLENPGRTHWEACKRVF 1324
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A5E8BZK9_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZK9_9ASCO) HSP 1 Score: 147 bits (370), Expect = 1.990e-35 Identity = 98/307 (31.92%), Postives = 158/307 (51.47%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQ------------RSTTHPRLYSS-------RDEA---------GETDILVAGYVDDLVIAG-CREKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRG-----------------RSGNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
+P S EA+ S EA+ W A E +L +NGTW LP GRK I +KW+FK K K D S+ R+KA L+ FSQVEG D+ ET APV R V ++AA+ F++ MD++ +FL L + + +++ + R+E+ G T +++A YVDDL+I+G E + + K ++S ++KDLG + LG+ V++ + T+ +S+ YI ++ + +G C + ++S YR ++G L+YA+ RPD+A A+ R M+ P
Sbjct: 1137 DPSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKKIHGALVKLGFIRNESDYGVYTKGSGSTMVIIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTRDLSDFSESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSP 1441
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A438HBU6_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HBU6_VITVI) HSP 1 Score: 141 bits (355), Expect = 1.210e-34 Identity = 96/282 (34.04%), Postives = 147/282 (52.13%), Query Frame = 1
Query: 7 PKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQR--STTHPRLYSSRDEAGETD----ILVAGYVDDLVIAGC-REKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECR---------------GRSGNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
PK+ EAL+ P KW A+ EE RAL KNG+W LP G+K + KW+F K K D ++ R+KA L+A++F+Q G D+ ET AP+ ++ R + SLA ++ DI +FL L + PR +E D +L+ YVDD+++ G +V+ K ++ + +KDLG + LG+EV R R ISISQ Y+ ++ G C+ G+ + +Y+ +VG L+Y S TRPDIA+A+ ++ M P
Sbjct: 145 PKNIQEALEIP---KWKEAVMEEIRALEKNGSWEVMNLPRGKKPVSCKWVFTVKSKTDGTIERYKACLVAKEFTQAYGIDYTETFAPITKLNTIRLLLSLATNLNWPFHQFDIKNAFLNGELEEEVFMMLPPRFCKKEEETRSNDGRMTVLIV-YVDDIILTGDDTREVERLKKVLATKFEVKDLGQMQYFLGMEVARSRKG--ISISQKKYVHDLLIETGMLGCKPSDTPIKARKRTESDGKPVDREKYQRLVGRLIYLSH-TRPDIAFAVSVVSQCMHSP 419
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A2P6UZ08_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ08_9CHLO) HSP 1 Score: 142 bits (358), Expect = 7.690e-34 Identity = 95/285 (33.33%), Postives = 142/285 (49.82%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTWL----PIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREKVDE-FKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS--GNSS---------------EYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFS 792
EP + EAL P+A W AM +E +L N TW P G K I KW++K K + ++ R+KA L+ Q F Q EG D+ E APV+ S RTV S AA D +L +DI +FL + + L+ S D + +L YVDD++I + K + +DL + + LG+++ RDR TI ++Q I+++ +YG D+ + S N+S Y +VGSL+Y S TRPDIA A+ AR M +P + ++
Sbjct: 758 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYADAGLFISTDPSKPAYLLT--YVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQGTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWT 1040
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A8H6Z624_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Z624_9AGAR) HSP 1 Score: 142 bits (357), Expect = 1.000e-33 Identity = 101/337 (29.97%), Postives = 158/337 (46.88%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPL----------------------------------------------------LQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREK-VDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECR--------------GRSGNSSE---------YRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
EP + EA +SP+ W A+KEE L N TW P ++ KW+F+ K V R+KA L+AQ FSQVEG D+F+T APVA +S RT+ +LAA+ D E+ +DI ++L L L R +T ++ R++AG ++V+ +VDD IA ++E K I++ + DLG + +LGI+V+R+R T+S+SQ YI I +RY D+ + +S +++E Y+ VGS++YAS TRPDI + + + ++ +P
Sbjct: 1270 EPHNLAEARRSPDWPHWEKAIKEELATLEANNTWELVNTPESANIVGNKWVFRIKRDAAGRVQRYKARLVAQGFSQVEGVDYFDTFAPVARLSSVRTILALAARLDLEIHQIDIKGAYLNGKLTEKERIFMRQPTGFPYPNSTGKILRLIKTLYGLKQSGRRWYQRLSEICEKLGLMRCSTDQAVFYRRNDAGI--VIVSVHVDDCTIAASNMTLINEVKAGIAKYVEIVDLGEIHWLLGIKVKRNRAERTLSLSQKAYITSIVRRYNLDDLKPYSIPMDPNLHLSSSQSPHTAEELAVMRSVPYKEAVGSVMYASLATRPDITFVVTKLSKFSVNP 1604
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A2P6UYV5_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV5_9CHLO) HSP 1 Score: 141 bits (356), Expect = 1.340e-33 Identity = 95/285 (33.33%), Postives = 142/285 (49.82%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTWL----PIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREKVDE-FKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS--GNSS---------------EYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFS 792
EP + EAL P+A W AM +E +L N TW P G K I KW++K K + ++ R+KA L+ Q F Q EG D+ E APV+ S RTV S AA D +L +DI +FL + + L+ S D + +L YVDD++I + K + +DL + + LG+++ RDR TI ++Q I+++ +YG D+ + S N+S Y +VGSL+Y S TRPDIA A+ AR M +P + ++
Sbjct: 596 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYADAGLFISTDPSKLAYLLT--YVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQGTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWT 878
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A5AQN2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AQN2_VITVI) HSP 1 Score: 139 bits (350), Expect = 7.410e-33 Identity = 94/302 (31.13%), Postives = 151/302 (50.00%), Query Frame = 1
Query: 4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQR--------------STTHPRLYSSRDEAGETDILVAGYVDDLVIAGCR-EKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS-------------GNSSE----------YRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCRE 783
EP+ EAL+ + KW AMK+E +L N TW LP+G+K + KW+++ K + D S +K L+ + F Q EG D+ E +PV MS R V + A + LE +D+ +FL L + H S D + I++ YVDD++IAG EK++ K +S++ +KDLG+ +LG+ + RD+ NGT+ +SQ Y++++ R+ +E + S + +E Y +GSL+YA TRPDIA+A+ +R M P ++
Sbjct: 569 EPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNEHDGS-KHYKTRLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKIAFLHGDLEEDLYMIQPEGIGFKRCEVDHCCYVKSFDNSY---IILLLYVDDMLIAGSGIEKINNLKKQLSKQFVMKDLGAAKQILGMRIVRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSSKTEKERDHMSKVPYASAIGSLMYAIVCTRPDIAHAVGVVSRFMSRPGKQ 866 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33107.8887.1 >prot_H-paniculata_contig33107.8887.1 ID=prot_H-paniculata_contig33107.8887.1|Name=mRNA_H-paniculata_contig33107.8887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp MAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLback to top mRNA from alignment at H-paniculata_contig33107:515..1814- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33107.8887.1 ID=mRNA_H-paniculata_contig33107.8887.1|Name=mRNA_H-paniculata_contig33107.8887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1300bp|location=Sequence derived from alignment at H-paniculata_contig33107:515..1814- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33107:515..1814- >mRNA_H-paniculata_contig33107.8887.1 ID=mRNA_H-paniculata_contig33107.8887.1|Name=mRNA_H-paniculata_contig33107.8887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig33107:515..1814- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |