mRNA_H-paniculata_contig33107.8887.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig33107.8887.1
Unique NamemRNA_H-paniculata_contig33107.8887.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A0C3PIV1_PISTI (Uncharacterized protein (Fragment) n=1 Tax=Pisolithus tinctorius Marx 270 TaxID=870435 RepID=A0A0C3PIV1_PISTI)

HSP 1 Score: 152 bits (385), Expect = 1.870e-37
Identity = 109/328 (33.23%), Postives = 154/328 (46.95%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQ------------RSTTHPR-----------------------------------------LYSSRDEAGETDILVAGYVDDLVIAGCR-EKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRG-----------RSGNSSE------------YRGMVGSLVYASTGTRPDIAYAI 744
            EP S  EA + P+  +W   ++EE   L + GTW    LP G  ++ +KW+F+ K     +V R+KA L+AQ FSQVEG D+F+T APVA ++  R V ++AA+ + EL  +DI  ++L   L               S  HP+                                         +Y  R   GE  I+V  +VDD  IA     +++EFK +I +   + DLG L  +LGIEV R+R +  IS+ Q  YI  I +R+GFDE +             SG S              YR  VGSL+YAS  TRPDI+YA+
Sbjct:  806 EPSSLAEARRHPDWPRWEEGIREELDTLKEAGTWELVDLPSGANIVGSKWVFRAKKDAAGNVVRYKARLVAQGFSQVEGIDYFDTFAPVATLASIRVVLAMAARSNLELHQIDIKGAYLNGTLTDDEVIYMRQPPGFESVDHPQKVCRLRKTLYGLKQSGCRWYQRLVEILVDELKFTHCSVDQAVYFRRRSTGELIIIVV-HVDDCTIAATLLSEIEEFKKDIRKHVEITDLGELHWLLGIEVTRNRDDRAISLCQRPYIESIIRRFGFDELKPVSNPMEPSTKLHSGQSPSTGAEFAAMKHIPYREAVGSLMYASLSTRPDISYAV 1132          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A535F6U2_9CHLR (DDE-type integrase/transposase/recombinase n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A535F6U2_9CHLR)

HSP 1 Score: 152 bits (385), Expect = 1.900e-37
Identity = 107/341 (31.38%), Postives = 161/341 (47.21%), Query Frame = 1
Query:    4 EPKSATEALKSPEADK-WPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQ---------------------------------------------------RSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREK-VDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS---------------GNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFSTCTPFF 810
            EP+S  EA+  P   K W AA++EE+ +L +NG W    LP  + ++  KW+FK K   + ++ RFKA L+A+ FSQ  G D+FET APVA ++ +RT+F+LAA   +E+ GMD+  ++L   L +                                                   RS   P LY  +       + +  +VDDL+I G   + +   K  ++    +KDLG L   LG+ + R   NG+ISI Q GYIR+I +R+G +  +  S                N  +Y+ MVGSL+YA   +RPD+AYAI Q ++   +P    F      F
Sbjct:  896 EPQSYEEAVNHPIYGKEWIAAIREEYNSLMRNGAWELVELPSDKNLVTCKWVFKAKHDANGNIVRFKARLVARGFSQAYGVDYFETYAPVAKLTTYRTIFALAALEQWEIHGMDVITAYLLGKLNEEIYMMQPEGFVRMGMKRNMVCRLLRSLYGLKQAARVWNQKIHAFLIKLGFVRSNADPCLYIKKF------LYITIWVDDLLIVGKNGRDIANVKGQLAGEFEMKDLGKLEYFLGMRIMRSL-NGSISIDQNGYIRQILERFGMEASKPVSTPIATGTRLVIGETESNIKQYQAMVGSLMYAMLCSRPDLAYAIQQLSQFNSNPTNAHFQAAKRVF 1229          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A146IJ40_MYCCL (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Mycena chlorophos TaxID=658473 RepID=A0A146IJ40_MYCCL)

HSP 1 Score: 149 bits (376), Expect = 1.600e-36
Identity = 106/337 (31.45%), Postives = 157/337 (46.59%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDI------------DASFLTPPL----------------------------------------LQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREK-VDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS-----------------------GNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
            EP++  EA +SP+   W  A++EE   L KNGTW     P    ++  KW+F+ K      V R+KA L+AQ FSQVEG D+F+T APVA +   RT+ +LAA+ D EL  +D+            +  F+  PL                                        L R +T   ++  +D  G   +++A +VDD  I G     V+E K   +R   + DLG +  +LGIEV+R+R   T+S+SQ  YI+ I +RY  D+ +  S                         S  Y+  VGSL+YAS GTRPDI +A+ + ++   +P
Sbjct:  190 EPRNLAEAKRSPDWPHWEKAIREELEMLEKNGTWELADAPHHANIVGNKWVFRIKRDAAGRVVRYKARLVAQGFSQVEGVDYFDTFAPVARLGSVRTILALAARLDLELHQIDVKGVYLNGELTDCERIFMRQPLGFPYPNSTGKVLRLVKMLYGLKQSGRRWYQRFAEICESMGLTRCSTDQAVFYHQDANGF--VVLAVHVDDCTIGGTNTALVNEMKSGFARYVEIVDLGEIHWLLGIEVKRNRQERTLSLSQTSYIQSIVRRYNLDDLKPLSIPMDPNVTLSSAQSPRTADELARMRSVPYKEAVGSLMYASLGTRPDITFAVTKLSKFSSNP 524          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A2G8S4Y9_9APHY (Transcription factor n=1 Tax=Ganoderma sinense ZZ0214-1 TaxID=1077348 RepID=A0A2G8S4Y9_9APHY)

HSP 1 Score: 147 bits (371), Expect = 1.370e-35
Identity = 110/348 (31.61%), Postives = 159/348 (45.69%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTWL----PIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLT-------------PPLLQRSTTHPR-------LY----SSR---------------------DEA------GETDILVAGYVDDLVIAG-CREKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRSG-----------------------NSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFSTCTPFF 810
            +P S  EA + PE  +W  AM+EE  AL K+GTW     P G  ++  KW+F  K     +V+ ++A L+A+ FSQ+ G+DFF T AP+A      TV + A + DFE+  +D+ +++L              PP +Q S    R       LY    S+R                     D+A      G   I++  +VDDL IA  C   + E K  +     + D G +  +LG  V RDR   T+S+SQ  YI  I +RYG ++ +  S                         +  YR +VGSL YAS GTRPDI YA+   +R +E+P R  +  C   F
Sbjct:  977 DPLSLAEARRRPEWPRWEQAMREELSALEKHGTWRLERPPPGTNIVDNKWVFHAKKDASGNVSGYRARLVARGFSQIPGQDFFNTYAPIARTPSMCTVLAFANREDFEIHQVDVKSAYLNGEFDDNEVIYMSMPPGVQLSDDPTRVLRLLRPLYGLCQSARHWHKKLRRVLEELLSMKACDVDQAVFYRIEGTDLIIIVAHVDDLTIAASCMALIVEVKTKLREAFEILDEGEIHWILGFAVIRDRAARTLSLSQTAYIEAIIRRYGLEDAKPLSMPMDPHVQLTAEQSPKTTAEVAEMRNVPYREVVGSLQYASMGTRPDITYAVSVLSRFLENPGRTHWEACKRVF 1324          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A5E8BZK9_9ASCO (Uncharacterized protein n=1 Tax=Saprochaete ingens TaxID=2606893 RepID=A0A5E8BZK9_9ASCO)

HSP 1 Score: 147 bits (370), Expect = 1.990e-35
Identity = 98/307 (31.92%), Postives = 158/307 (51.47%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQ------------RSTTHPRLYSS-------RDEA---------GETDILVAGYVDDLVIAG-CREKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRG-----------------RSGNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
            +P S  EA+ S EA+ W  A   E  +L +NGTW    LP GRK I +KW+FK K K D S+ R+KA L+   FSQVEG D+ ET APV      R V ++AA+  F++  MD++ +FL   L +            +     +++ +       R+E+         G T +++A YVDDL+I+G   E + + K ++S   ++KDLG +   LG+ V++   + T+ +S+  YI ++ + +G   C                    + ++S YR ++G L+YA+   RPD+A A+    R M+ P
Sbjct: 1137 DPSSFEEAMSSEEAEFWLEACVIEMSSLKRNGTWELVDLPPGRKAINSKWVFKVKRKADGSIERYKARLVCIGFSQVEGIDYTETFAPVVRYETVRIVLAIAAQFGFQVHHMDVETAFLNGDLKEDIYMRQPKGFVVKGQESKKIHGALVKLGFIRNESDYGVYTKGSGSTMVIIALYVDDLLISGNSSEVIAKTKSSLSSMFKMKDLGPVEQFLGMRVKQSPYHITVDVSR--YIFDMLEEFGMQNCSSVKTPLPTRDLSDFSESDSATDASMYRSIIGKLIYAANCARPDLAVAVSFLCRYMQSP 1441          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A438HBU6_VITVI (Retrovirus-related Pol polyprotein from transposon RE1 n=1 Tax=Vitis vinifera TaxID=29760 RepID=A0A438HBU6_VITVI)

HSP 1 Score: 141 bits (355), Expect = 1.210e-34
Identity = 96/282 (34.04%), Postives = 147/282 (52.13%), Query Frame = 1
Query:    7 PKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQR--STTHPRLYSSRDEAGETD----ILVAGYVDDLVIAGC-REKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECR---------------GRSGNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
            PK+  EAL+ P   KW  A+ EE RAL KNG+W    LP G+K +  KW+F  K K D ++ R+KA L+A++F+Q  G D+ ET AP+  ++  R + SLA   ++     DI  +FL   L +       PR     +E    D    +L+  YVDD+++ G    +V+  K  ++ +  +KDLG +   LG+EV R R    ISISQ  Y+ ++    G   C+               G+  +  +Y+ +VG L+Y S  TRPDIA+A+   ++ M  P
Sbjct:  145 PKNIQEALEIP---KWKEAVMEEIRALEKNGSWEVMNLPRGKKPVSCKWVFTVKSKTDGTIERYKACLVAKEFTQAYGIDYTETFAPITKLNTIRLLLSLATNLNWPFHQFDIKNAFLNGELEEEVFMMLPPRFCKKEEETRSNDGRMTVLIV-YVDDIILTGDDTREVERLKKVLATKFEVKDLGQMQYFLGMEVARSRKG--ISISQKKYVHDLLIETGMLGCKPSDTPIKARKRTESDGKPVDREKYQRLVGRLIYLSH-TRPDIAFAVSVVSQCMHSP 419          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A2P6UZ08_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UZ08_9CHLO)

HSP 1 Score: 142 bits (358), Expect = 7.690e-34
Identity = 95/285 (33.33%), Postives = 142/285 (49.82%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTWL----PIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREKVDE-FKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS--GNSS---------------EYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFS 792
            EP +  EAL  P+A  W  AM +E  +L  N TW     P G K I  KW++K K   + ++ R+KA L+ Q F Q EG D+ E  APV+  S  RTV S AA  D +L  +DI  +FL   + +       L+ S D +    +L   YVDD++I   +       K  +      +DL + +  LG+++ RDR   TI ++Q   I+++  +YG D+ +  S   N+S                Y  +VGSL+Y S  TRPDIA A+   AR M +P  + ++
Sbjct:  758 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYADAGLFISTDPSKPAYLLT--YVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQGTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWT 1040          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A8H6Z624_9AGAR (Transcription factor n=1 Tax=Mycena sanguinolenta TaxID=230812 RepID=A0A8H6Z624_9AGAR)

HSP 1 Score: 142 bits (357), Expect = 1.000e-33
Identity = 101/337 (29.97%), Postives = 158/337 (46.88%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPL----------------------------------------------------LQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREK-VDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECR--------------GRSGNSSE---------YRGMVGSLVYASTGTRPDIAYAIHQAARRMEDP 774
            EP +  EA +SP+   W  A+KEE   L  N TW     P    ++  KW+F+ K      V R+KA L+AQ FSQVEG D+F+T APVA +S  RT+ +LAA+ D E+  +DI  ++L   L                                                    L R +T   ++  R++AG   ++V+ +VDD  IA      ++E K  I++   + DLG +  +LGI+V+R+R   T+S+SQ  YI  I +RY  D+ +               +S +++E         Y+  VGS++YAS  TRPDI + + + ++   +P
Sbjct: 1270 EPHNLAEARRSPDWPHWEKAIKEELATLEANNTWELVNTPESANIVGNKWVFRIKRDAAGRVQRYKARLVAQGFSQVEGVDYFDTFAPVARLSSVRTILALAARLDLEIHQIDIKGAYLNGKLTEKERIFMRQPTGFPYPNSTGKILRLIKTLYGLKQSGRRWYQRLSEICEKLGLMRCSTDQAVFYRRNDAGI--VIVSVHVDDCTIAASNMTLINEVKAGIAKYVEIVDLGEIHWLLGIKVKRNRAERTLSLSQKAYITSIVRRYNLDDLKPYSIPMDPNLHLSSSQSPHTAEELAVMRSVPYKEAVGSVMYASLATRPDITFVVTKLSKFSVNP 1604          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A0A2P6UYV5_9CHLO (Gag-Pol poly (Fragment) n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6UYV5_9CHLO)

HSP 1 Score: 141 bits (356), Expect = 1.340e-33
Identity = 95/285 (33.33%), Postives = 142/285 (49.82%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTWL----PIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREKVDE-FKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS--GNSS---------------EYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFS 792
            EP +  EAL  P+A  W  AM +E  +L  N TW     P G K I  KW++K K   + ++ R+KA L+ Q F Q EG D+ E  APV+  S  RTV S AA  D +L  +DI  +FL   + +       L+ S D +    +L   YVDD++I   +       K  +      +DL + +  LG+++ RDR   TI ++Q   I+++  +YG D+ +  S   N+S                Y  +VGSL+Y S  TRPDIA A+   AR M +P  + ++
Sbjct:  596 EPTTMKEALSGPDAAAWQLAMDDEMASLIANDTWTLCEPPHGTKPIPAKWVYKIKRDSNGNIERYKARLVVQGFRQREGIDYDEVFAPVSKYSTLRTVLSTAAAQDLDLHQLDIKTAFLNGTIDEEVYADAGLFISTDPSKLAYLLT--YVDDILIVTPKTTSSAAIKQKLMAAFEARDLDNATFFLGMDLIRDRTAKTIKLAQSRNIKDLLSKYGMDDAKTASTPANASIKLTKQGTPLDTQTHSYSALVGSLMYLSICTRPDIAQAVGALARHMANPTTDHWT 878          
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Match: A5AQN2_VITVI (Uncharacterized protein n=1 Tax=Vitis vinifera TaxID=29760 RepID=A5AQN2_VITVI)

HSP 1 Score: 139 bits (350), Expect = 7.410e-33
Identity = 94/302 (31.13%), Postives = 151/302 (50.00%), Query Frame = 1
Query:    4 EPKSATEALKSPEADKWPAAMKEEWRALAKNGTW----LPIGRKMICTKWIFKPKLKEDSSVARFKA*LMAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFLTPPLLQR--------------STTHPRLYSSRDEAGETDILVAGYVDDLVIAGCR-EKVDEFKHNISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDECRGRS-------------GNSSE----------YRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCRE 783
            EP+   EAL+   + KW  AMK+E  +L  N TW    LP+G+K +  KW+++ K + D S   +K  L+ + F Q EG D+ E  +PV  MS  R V  + A  +  LE +D+  +FL   L +                  H     S D +    I++  YVDD++IAG   EK++  K  +S++  +KDLG+   +LG+ + RD+ NGT+ +SQ  Y++++  R+  +E +  S              + +E          Y   +GSL+YA   TRPDIA+A+   +R M  P ++
Sbjct:  569 EPECYDEALQDENSSKWELAMKDEMDSLLGNQTWELTELPVGKKALHNKWVYRIKNEHDGS-KHYKTRLVVKGFQQKEGIDYTEIFSPVVKMSTIRLVLGMVAVENLHLEQLDVKIAFLHGDLEEDLYMIQPEGIGFKRCEVDHCCYVKSFDNSY---IILLLYVDDMLIAGSGIEKINNLKKQLSKQFVMKDLGAAKQILGMRIVRDKANGTLKLSQSEYVKKVLSRFNMNEAKPVSTPLGSHFKLSKEQSSKTEKERDHMSKVPYASAIGSLMYAIVCTRPDIAHAVGVVSRFMSRPGKQ 866          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33107.8887.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A0C3PIV1_PISTI1.870e-3733.23Uncharacterized protein (Fragment) n=1 Tax=Pisolit... [more]
A0A535F6U2_9CHLR1.900e-3731.38DDE-type integrase/transposase/recombinase n=1 Tax... [more]
A0A146IJ40_MYCCL1.600e-3631.45Reverse transcriptase Ty1/copia-type domain-contai... [more]
A0A2G8S4Y9_9APHY1.370e-3531.61Transcription factor n=1 Tax=Ganoderma sinense ZZ0... [more]
A0A5E8BZK9_9ASCO1.990e-3531.92Uncharacterized protein n=1 Tax=Saprochaete ingens... [more]
A0A438HBU6_VITVI1.210e-3434.04Retrovirus-related Pol polyprotein from transposon... [more]
A0A2P6UZ08_9CHLO7.690e-3433.33Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
A0A8H6Z624_9AGAR1.000e-3329.97Transcription factor n=1 Tax=Mycena sanguinolenta ... [more]
A0A2P6UYV5_9CHLO1.340e-3333.33Gag-Pol poly (Fragment) n=1 Tax=Micractinium condu... [more]
A5AQN2_VITVI7.410e-3331.13Uncharacterized protein n=1 Tax=Vitis vinifera Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig33107contigH-paniculata_contig33107:515..1814 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeFungi
Seed ortholog score107.1
Seed ortholog evalue1.2e-20
Seed eggNOG ortholog82508.K1VA87
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Reverse transcriptase (RNA-dependent DNA polymerase)
EggNOG OGs38DPC@33154,3NUZ7@4751,3UY7N@5204,3VGMM@5234,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelTremellales
Best eggNOG OGNA|NA|NA
Exons4
Model size998
Cds size753
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig33107.8887.1prot_H-paniculata_contig33107.8887.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig33107 562..1595 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930024.542797-UTR-H-paniculata_contig33107:514..5611622930024.542797-UTR-H-paniculata_contig33107:514..561Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig33107 515..561 -
1691481115.0999973-UTR-H-paniculata_contig33107:514..5611691481115.0999973-UTR-H-paniculata_contig33107:514..561Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig33107 515..561 -
1622930024.591022-UTR-H-paniculata_contig33107:1595..16891622930024.591022-UTR-H-paniculata_contig33107:1595..1689Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig33107 1596..1689 -
1691481115.1338391-UTR-H-paniculata_contig33107:1595..16891691481115.1338391-UTR-H-paniculata_contig33107:1595..1689Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig33107 1596..1689 -
1622930024.606681-UTR-H-paniculata_contig33107:1710..18141622930024.606681-UTR-H-paniculata_contig33107:1710..1814Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig33107 1711..1814 -
1691481115.141266-UTR-H-paniculata_contig33107:1710..18141691481115.141266-UTR-H-paniculata_contig33107:1710..1814Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig33107 1711..1814 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930024.5578835-CDS-H-paniculata_contig33107:561..8581622930024.5578835-CDS-H-paniculata_contig33107:561..858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33107 562..858 -
1691481115.1088166-CDS-H-paniculata_contig33107:561..8581691481115.1088166-CDS-H-paniculata_contig33107:561..858Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33107 562..858 -
1622930024.5687337-CDS-H-paniculata_contig33107:987..12851622930024.5687337-CDS-H-paniculata_contig33107:987..1285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33107 988..1285 -
1691481115.1161566-CDS-H-paniculata_contig33107:987..12851691481115.1161566-CDS-H-paniculata_contig33107:987..1285Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33107 988..1285 -
1622930024.579479-CDS-H-paniculata_contig33107:1437..15951622930024.579479-CDS-H-paniculata_contig33107:1437..1595Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33107 1438..1595 -
1691481115.1265342-CDS-H-paniculata_contig33107:1437..15951691481115.1265342-CDS-H-paniculata_contig33107:1437..1595Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig33107 1438..1595 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig33107.8887.1

>prot_H-paniculata_contig33107.8887.1 ID=prot_H-paniculata_contig33107.8887.1|Name=mRNA_H-paniculata_contig33107.8887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=251bp
MAQDFSQVEGEDFFETSAPVAHMSIFRTVFSLAAKHDFELEGMDIDASFL
TPPLLQRSTTHPRLYSSRDEAGETDILVAGYVDDLVIAGCREKVDEFKHN
ISRRERLKDLGSLSCVLGIEVRRDRPNGTISISQGGYIREIPKRYGFDEC
RGRSGNSSEYRGMVGSLVYASTGTRPDIAYAIHQAARRMEDPCREDFSTC
TPFFVISVLCLTSALRSAVRVTVTVWKDSLMPIGRKMSRTESPQQYTYSS
*
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mRNA from alignment at H-paniculata_contig33107:515..1814-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig33107.8887.1 ID=mRNA_H-paniculata_contig33107.8887.1|Name=mRNA_H-paniculata_contig33107.8887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1300bp|location=Sequence derived from alignment at H-paniculata_contig33107:515..1814- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAGGAGCCGAAATCTGCGACAGAAGCATTGAAGAGCCCAGAGGCAGATAA ATGGCCCGCGGCAATGAAGGAGGAGTGGAGGGCGTTGGCAAAAAATGGGA CGTGGTAGAGCGAGGACCCCGGGAGGTTACCGATAGGGCGGAAGATGATC TGTACCAAATGGATCTTCAAGCCGAAACTGAAGGAGGACAGCAGCGTGGC ACGCTTCAAAGCGTGACTAATGGCTCAAGATTTTTCACAGGTGGAGGGTG AAGATTTCTTTGAAACCAGTGCCCCCGTAGCTCACATGTCGATATTCCGT ACTGTTTTCAGCCTAGCCGCCAAACACGATTTCGAACTAGAAGGCATGGA CATAGATGCGTCGTTTTTGACGCCCCCGTAGAAGAAGAGCTGTTTGTTAA GCTATCCCCCGAGTTTTCCCCTTCCTCCCGAGATATACCGTTTGTGCGCC ACCTGCGTAAAATGCTGTATGACCTCAAGCAGAGCGGCCGAAACTGGAAT AACACTCTTGACGATTTTCTTGTTGGGAGATTACTCCAGCGTTCCACTAC CCACCCACGCTTGTACTCCTCTCGCGACGAAGCGGGAGAGACAGACATTC TCGTGGCCGGCTATGTTGACGACTTGGTCATCGCTGGGTGTCGTGAGAAA GTAGATGAGTTCAAGCACAATATAAGTCGGCGTGAAAGGCTGAAAGACTT GGGCTCCCTCTCGTGCGTGTTGGGAATAGAAGTACGACGCGACCGCCCCA ATGGTACCATATCAATATCCCAAGGTGGCTACATCCGCGAGATACCGAAA AGATACGGTTTTGACGAGTGTCGAGGCGTCCCGACCCCTGTAGAGGGAAA ATTGAAGATTTTGGCACCCGAGTCGGCCGACAAGCCCTCCGAACCAAATC CACTTGGGGCTATACTGTCGGACATAGGTGCAGGAGTACAAGAAAGCAGC TGCGAGAGAAGTGGCAATTCATCTGAATACAGAGGCATGGTAGGATCACT CGTGTACGCCTCGACAGGAACTAGACCTGACATAGCTTACGCGATACACC AAGCAGCACGCCGTATGGAGGACCCATGTCGGGAAGACTTCAGTACATGC ACGCCATTTTTCGTTATCTCAGTACTGTGCCTGACCTCGGCATTACGTTC AGCGGTAAGAGTAACGGTCACGGTCTGGAAGGATTCGTTGATGCCGATTG GGCGGAAAATGTCGAGGACCGAAAGTCCACAACAATATACATATTCAAGC TGAACGGTGGTGCGATAAGTTGGTACTCTAGGAAGTTACAATTAGTTACG
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Coding sequence (CDS) from alignment at H-paniculata_contig33107:515..1814-

>mRNA_H-paniculata_contig33107.8887.1 ID=mRNA_H-paniculata_contig33107.8887.1|Name=mRNA_H-paniculata_contig33107.8887.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1506bp|location=Sequence derived from alignment at H-paniculata_contig33107:515..1814- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCTCAAGATTTTTCACAGGTGGAGGGTGAAGATTTCTTTGAAACCAG
TGCCCCCGTAGCTCACATGTCGATATTCCGTACTGTTTTCAGCCTAGCCG
CCAAACACGATTTCGAACTAGAAGGCATGGACATAGATGCGTCGTTTTTG
ACGCCCCCATGGCTCAAGATTTTTCACAGGTGGAGGGTGAAGATTTCTTT
GAAACCAGTGCCCCCGTAGCTCACATGTCGATATTCCGTACTGTTTTCAG
CCTAGCCGCCAAACACGATTTCGAACTAGAAGGCATGGACATAGATGCGT
CGTTTTTGACGCCCCCATTACTCCAGCGTTCCACTACCCACCCACGCTTG
TACTCCTCTCGCGACGAAGCGGGAGAGACAGACATTCTCGTGGCCGGCTA
TGTTGACGACTTGGTCATCGCTGGGTGTCGTGAGAAAGTAGATGAGTTCA
AGCACAATATAAGTCGGCGTGAAAGGCTGAAAGACTTGGGCTCCCTCTCG
TGCGTGTTGGGAATAGAAGTACGACGCGACCGCCCCAATGGTACCATATC
AATATCCCAAGGTGGCTACATCCGCGAGATACCGAAAAGATACGGTTTTG
ACGAGTGTCGAGGCATTACTCCAGCGTTCCACTACCCACCCACGCTTGTA
CTCCTCTCGCGACGAAGCGGGAGAGACAGACATTCTCGTGGCCGGCTATG
TTGACGACTTGGTCATCGCTGGGTGTCGTGAGAAAGTAGATGAGTTCAAG
CACAATATAAGTCGGCGTGAAAGGCTGAAAGACTTGGGCTCCCTCTCGTG
CGTGTTGGGAATAGAAGTACGACGCGACCGCCCCAATGGTACCATATCAA
TATCCCAAGGTGGCTACATCCGCGAGATACCGAAAAGATACGGTTTTGAC
GAGTGTCGAGGCAGAAGTGGCAATTCATCTGAATACAGAGGCATGGTAGG
ATCACTCGTGTACGCCTCGACAGGAACTAGACCTGACATAGCTTACGCGA
TACACCAAGCAGCACGCCGTATGGAGGACCCATGTCGGGAAGACTTCAGT
ACATGCACGCCATTTTTCGTTATCTCAGTACTGTGCCTGACCTCGGCATT
ACGTTCAGCGGTAAGAGTAACGGTCACGGTCTGGAAGGATTCGTTGATGC
CGATTGGGCGGAAAATGTCGAGGACCGAAAGTCCACAACAATATACATAT
TCAAGCTGAAGAAGTGGCAATTCATCTGAATACAGAGGCATGGTAGGATC
ACTCGTGTACGCCTCGACAGGAACTAGACCTGACATAGCTTACGCGATAC
ACCAAGCAGCACGCCGTATGGAGGACCCATGTCGGGAAGACTTCAGTACA
TGCACGCCATTTTTCGTTATCTCAGTACTGTGCCTGACCTCGGCATTACG
TTCAGCGGTAAGAGTAACGGTCACGGTCTGGAAGGATTCGTTGATGCCGA
TTGGGCGGAAAATGTCGAGGACCGAAAGTCCACAACAATATACATATTCA
AGCTGA
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