mRNA_H-paniculata_contig331.8884.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A6H5JAK3_9PHAE (Aldo_ket_red domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JAK3_9PHAE) HSP 1 Score: 541 bits (1393), Expect = 2.460e-187 Identity = 260/313 (83.07%), Postives = 280/313 (89.46%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAPPLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQST 939
G+GTWAWGNK+VWGY + MD ELQEAFNLCV EGINWFDTADSYGTGKIVGQAERLLGKF REYPGS +R DL++ATKFAPYPYR+GSQSIVKAC ETLER+ ADSL VGQLHWAPPLGWQEEAYW GL+QL+ GRI EVGLSNYGPKGV RAH FLAGL TPLASNQVQFSLISRYPLDNGLLETA SLGVT+IAYSPLGLGLLTGKYN GNIPSGPRGIIFRRVLPT PLL+T+ EI + R KTMSQVALNWC+CKGTVPIVGVKTLAQARENLGALGW LS EE+ LD AA +++ Q+VQNIFQST
Sbjct: 84 GLGTWAWGNKVVWGYEDAMDAELQEAFNLCVTEGINWFDTADSYGTGKIVGQAERLLGKFVREYPGSDKIRGDLQIATKFAPYPYRVGSQSIVKACDETLERVGADSLGVGQLHWAPPLGWQEEAYWTGLAQLKADGRIGEVGLSNYGPKGVARAHRFLAGLDTPLASNQVQFSLISRYPLDNGLLETAKSLGVTSIAYSPLGLGLLTGKYNAGNIPSGPRGIIFRRVLPTMSPLLSTMGEISSARGKTMSQVALNWCVCKGTVPIVGVKTLAQARENLGALGWSLSPEEVEGLDAAAKRIKKQSVQNIFQST 396
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A835ZGI2_9STRA (NADP-dependent oxidoreductase domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZGI2_9STRA) HSP 1 Score: 388 bits (997), Expect = 8.680e-129 Identity = 197/307 (64.17%), Postives = 226/307 (73.62%), Query Frame = 1
Query: 55 MDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAPPLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGN-------------IPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
MD ELQ AFN C++ GINWFDTADSYGTGK+ GQ+E+LLGKF REYPG AS R+D+RVATKFAPYP+RIG S+ +ACQETL+RLE L V QLHW P LGWQE AY L+ LR GR+RE+GLSNYGP+G+ R H LA G PLASNQVQFSLISR PL++GL++ A LGVT IAYSPLGLGLLTGKY MG GPRG +FR +LP PLL TL + RRKT SQVA+NW +CKG VPIVGVK+ AQARE GALGWRLS E+ ELD AA + QA QNIFQ+
Sbjct: 1 MDAELQAAFNTCIDAGINWFDTADSYGTGKLAGQSEKLLGKFIREYPG-ASKRDDIRVATKFAPYPFRIGEGSMRQACQETLDRLERPVLDVAQLHWPPSLGWQEAAYLRALAGLRAEGRVREIGLSNYGPRGLRRVHAALAAAGAPLASNQVQFSLISRLPLESGLVDAARELGVTPIAYSPLGLGLLTGKYGMGGKAGXXXXXXXXXXXXXGPRGFLFRSLLPQLAPLLGTLAAVADARRKTCSQVAVNWTMCKGAVPIVGVKSAAQAREAAGALGWRLSAAEVEELDAAARRCRVQAQQNIFQT 306
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A5P1F3J0_ASPOF (Aldo_ket_red domain-containing protein n=1 Tax=Asparagus officinalis TaxID=4686 RepID=A0A5P1F3J0_ASPOF) HSP 1 Score: 379 bits (973), Expect = 4.700e-124 Identity = 186/317 (58.68%), Postives = 228/317 (71.92%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHW-----APPLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
G GTWAWGNKL+WGY+EEMD ELQE FNL V +GIN FDTADSYGTGK+ GQ+ERLLGKF REY G VR+D+ +ATKFA YP+R+ S VKAC+ +LER+E + + +GQLHW AP QE A W+GL + G +R VG+SNYGPK +++ + +L G PL S QVQFSL+S L SLGV IAYSPLGLG+LTGKY N+P GPRG++FR++LP PLL+TL+ I R KTMSQVA+NWCICKGT+PI GVKT+ QA ENLG+LGWRL +EI EL AA + +QNIFQ+
Sbjct: 68 GFGTWAWGNKLLWGYQEEMDGELQETFNLAVRKGINLFDTADSYGTGKLTGQSERLLGKFIREYQGPKKVRDDVVIATKFAAYPWRLTSGQFVKACKSSLERMELEQIGIGQLHWSTANYAPA---QESALWDGLVAMYEKGLVRAVGVSNYGPKQLIKIYDYLKSRGVPLCSVQVQFSLLSIGEEQKELKSVCDSLGVQIIAYSPLGLGMLTGKYTSSNLPRGPRGLLFRQILPGLDPLLSTLKGIAVRRGKTMSQVAINWCICKGTIPIPGVKTVEQAEENLGSLGWRLRSDEIDELQYAATNSSTKMIQNIFQT 381
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A0G4GSM4_VITBC (Aldo_ket_red domain-containing protein n=2 Tax=Vitrella brassicaformis TaxID=1169539 RepID=A0A0G4GSM4_VITBC) HSP 1 Score: 380 bits (977), Expect = 1.580e-123 Identity = 186/315 (59.05%), Postives = 232/315 (73.65%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAPPLGWQEEAYWEGLSQLRTAGRIREVGLSNYGP---KGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
G+GTWAWGNK +W Y D ELQ AFN CV G+NWFD+ADSYGTG++ G++E LLGKF + Y G R+D+RVATKFAPYP+R+G SIV+AC+ETLERL+ L V QLHW+PPLGWQE+AY +GL+ G R +G+SNYGP +GVVR L G LASNQVQ SL+SR PL++GLL+T GV I YSPL LGLL+GKY+ N+P G RG++FR++LP GPL+ TLRE+ R KT+ QVALNWC+ KG VP+VGVKT QA ENLGALGWRLSE E+ LD ++ V+ + +QNIFQ+
Sbjct: 151 GIGTWAWGNKFLWDYDPARDAELQAAFNYCVEHGLNWFDSADSYGTGELAGRSEILLGKFIQSYKGGP--RDDIRVATKFAPYPWRVGRGSIVQACRETLERLQRPCLDVAQLHWSPPLGWQEDAYIDGLADCVDRGMARAIGVSNYGPVKLQGVVRQ---LKARGLTLASNQVQLSLLSRVPLESGLLDTCRENGVVLIGYSPLCLGLLSGKYDADNMPKGARGVLFRQLLPKVGPLIQTLREVANERSKTVGQVALNWCLAKGAVPLVGVKTAKQAEENLGALGWRLSEAEVRALDDVSSAVKAKTLQNIFQT 460
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: UPI001C4DA99D (pyridoxal reductase, chloroplastic-like n=2 Tax=Zingiber officinale TaxID=94328 RepID=UPI001C4DA99D) HSP 1 Score: 367 bits (942), Expect = 2.030e-119 Identity = 178/316 (56.33%), Postives = 231/316 (73.10%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAP----PLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
G GTWAWGN+L+WGYRE+MD LQE FNL + GI FDTADSYGTG++ GQ+ERLLGKF E+ G S+R ++ +ATKFA YP+R+ + VKAC+ +LERL+ D + +GQLHW+ PL QE+A W+GL + G +R VG+SNYGPK +++ H +L G PL+S QVQFSL+S L + SLG+ IAYSPLGLG+LTGKY N+P GPR ++FR+VLP PLL +L+ I R+KTMSQVA+NWCICKGTVPI GVK++ QA+ENLGALGWRLS +E++EL+ AA + +QNIFQ+
Sbjct: 67 GFGTWAWGNQLLWGYREDMDTALQEVFNLALRNGITLFDTADSYGTGRLNGQSERLLGKFIGEFQGP-SIRNNIVIATKFAAYPWRLTAAQFVKACKSSLERLQLDQIGIGQLHWSTANYAPL--QEKALWDGLVAMYEEGLVRAVGVSNYGPKQLIKIHDYLESRGVPLSSAQVQFSLLSMSEAQMELKQVCDSLGICLIAYSPLGLGMLTGKYTAANLPPGPRALLFRQVLPGLVPLLNSLKNISERRQKTMSQVAINWCICKGTVPIPGVKSVGQAKENLGALGWRLSSDEVLELESAAMSSSKKMIQNIFQT 379
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: UPI001929890B (pyridoxal reductase, chloroplastic n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI001929890B) HSP 1 Score: 367 bits (941), Expect = 3.060e-119 Identity = 177/316 (56.01%), Postives = 233/316 (73.73%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAP----PLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
G GTWAWGN+L+WGYREEMD LQE FNL + GIN FDTADSYGTG++ GQ+ERLLGKF R+ P V++ + +ATKFA YP+R+ + VKAC+ +L+RL+ + + +GQLHW+ PL QE+A W+GL + G +R VG+SNYGPK +++ + +L G PL S QVQFSL+S P L ++SLG+ I+YSPLGLG+LTGKY+ N+P GPRG++FR++LP PLL +LREI R KTMSQ+A+NWCICKGT+PI GVKT+ QA ENLG+LGWRLS +EI EL+ AA + + +QNIFQ+
Sbjct: 70 GFGTWAWGNQLLWGYREEMDSVLQETFNLAIRNGINLFDTADSYGTGRLNGQSERLLGKFIRQGPNK--VQDKIVIATKFAAYPWRLTAGQFVKACESSLDRLQLEQIGIGQLHWSTANYAPL--QEKALWDGLVAMYEKGLVRAVGVSNYGPKQLIKIYDYLNSRGVPLCSAQVQFSLLSMGPEQMELKAISNSLGIGLISYSPLGLGMLTGKYSTSNLPRGPRGLLFRQILPGLNPLLNSLREIAQRRGKTMSQIAINWCICKGTIPIPGVKTVEQAEENLGSLGWRLSSDEIFELETAAEESPRKMIQNIFQT 381
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A1Q3DB13_CEPFO (Aldo_ket_red domain-containing protein n=1 Tax=Cephalotus follicularis TaxID=3775 RepID=A0A1Q3DB13_CEPFO) HSP 1 Score: 366 bits (939), Expect = 3.710e-119 Identity = 171/317 (53.94%), Postives = 232/317 (73.19%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHW-----APPLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
G GTWAWGN+L+WGY++ MD ELQ+ FNL V+ GIN FDTADSYGTG+ GQ+E+LLGKF RE+ G +R+D+ +ATKFA YP+R+ VKAC+ +L+RL+ + + +GQLHW APP QE A W+GL + G ++ VG+SNYGPK +V+ H +L G PL S QVQFSL+S ++ + +LG+ I+YSPLGLG+LTGKY ++PSGPR ++F+++LP PLL ++REI RRKTM+QVA+NWCICKGT+PI GVKT+ QA ENLGALGWRLS +E++ L+ +A + + +QNIFQ+
Sbjct: 53 GFGTWAWGNQLLWGYQQSMDSELQQTFNLAVDNGINLFDTADSYGTGRFNGQSEKLLGKFIREFEGKKRIRDDIVIATKFAAYPWRLTPGQFVKACKASLDRLQIEQIGIGQLHWSTANYAPP---QERALWDGLVAMYEKGFVQAVGVSNYGPKQLVKIHDYLKARGVPLCSAQVQFSLLSLGENQLEIMNISETLGIRLISYSPLGLGMLTGKYTPSSLPSGPRALLFKQILPGLDPLLGSIREIAQKRRKTMAQVAINWCICKGTIPIPGVKTVKQAEENLGALGWRLSSDEVLRLEYSARESPQRMIQNIFQT 366
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A7I8KPR4_SPIIN (Hypothetical protein n=1 Tax=Spirodela intermedia TaxID=51605 RepID=A0A7I8KPR4_SPIIN) HSP 1 Score: 366 bits (940), Expect = 6.660e-119 Identity = 179/316 (56.65%), Postives = 229/316 (72.47%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAP----PLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQS 936
G GTWAWGN+L+WGY+EEMD ELQE FNL V G+N FDTADSYGTG++ GQ+ERLLGKF RE+PGS + R+ + +ATKFA YP+R+ S VKAC+ +LERLE + + +GQLHW+ PL QE A W+GL + G +R VG+SNYG +V+ + +L G PL S QVQFSL+S L SLG+ I+YSPLGLG+L+GKY +P GPR ++FR++LP PLL++LR + RRKT+SQVA+NWCICKGTVPI GVKT+ QA ENLGALGWRL+ +EI+EL+ AA Q +QNIFQ+
Sbjct: 81 GFGTWAWGNQLLWGYQEEMDRELQEIFNLAVRNGVNLFDTADSYGTGRLNGQSERLLGKFIREFPGSKAERDSIVIATKFAAYPWRLTSGQFVKACKSSLERLEIEQIGIGQLHWSTANYAPL--QELALWDGLVAMYEKGLVRAVGVSNYGANQLVKIYGYLKSRGVPLCSAQVQFSLLSMGKDQLELKAVCDSLGIRLISYSPLGLGMLSGKYTASKLPPGPRALLFRQILPGLDPLLSSLRRVADRRRKTVSQVAINWCICKGTVPIPGVKTVRQAEENLGALGWRLTPDEILELESAADDSPRQMIQNIFQT 394
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A2K1L6V3_PHYPA (Aldo_ket_red domain-containing protein n=2 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1L6V3_PHYPA) HSP 1 Score: 364 bits (935), Expect = 1.480e-118 Identity = 175/315 (55.56%), Postives = 232/315 (73.65%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAPP--LGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQST 939
G+GTWAWGN+L+WGY EEMD ELQE FNL V++G+N FDTADSYGTGK+ G++E LLGKF REYPG + +++ +ATKFA +P+R+ IV AC+ +L+RLE + LA+GQLHW+ +QE+A W+GL + G ++ VG+SNYGPK + R H +L G PL+S QVQFSL+S+ L LG+ IAYSPLGLG+LTGKY+ N+PSGPRG++F+++LP GPLL T+ +I R KT+SQVA+NWCICKG +PI GVK+L QA ENLGALGWRL EE+ L++AA + +QNIFQ++
Sbjct: 55 GLGTWAWGNQLLWGYEEEMDAELQEVFNLAVSKGVNLFDTADSYGTGKLNGRSELLLGKFIREYPGKDA--KNVNIATKFAAFPWRLTPSQIVSACKGSLKRLEMEQLALGQLHWSAANYAPFQEQALWDGLVAIYEQGLVKAVGVSNYGPKQLRRVHKYLDRKGVPLSSVQVQFSLLSKGADQMELKTVCDELGIQLIAYSPLGLGMLTGKYSPTNVPSGPRGLLFKQILPGLGPLLDTMNQIAKKRNKTVSQVAINWCICKGAIPIPGVKSLKQAEENLGALGWRLKPEEVASLELAADQAPRGMIQNIFQTS 367
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Match: A0A068UBI9_COFCA (Aldo_ket_red domain-containing protein n=3 Tax=Coffea TaxID=13442 RepID=A0A068UBI9_COFCA) HSP 1 Score: 363 bits (931), Expect = 7.990e-118 Identity = 170/317 (53.63%), Postives = 233/317 (73.50%), Query Frame = 1
Query: 1 GVGTWAWGNKLVWGYREEMDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSASVREDLRVATKFAPYPYRIGSQSIVKACQETLERLEADSLAVGQLHWAP----PLGWQEEAYWEGLSQLRTAGRIREVGLSNYGPKGVVRAHTFLAGLGTPLASNQVQFSLISRYPLDNGLLETASSLGVTNIAYSPLGLGLLTGKYNMGNIPSGPRGIIFRRVLPTAGPLLATLREIGTTRRKTMSQVALNWCICKGTVPIVGVKTLAQARENLGALGWRLSEEEIVELDVAAAKVENQAVQNIFQST 939
G GTWAWGN+L+WGY+E MD +LQ+ FNL + GIN+FDTADSYGTGK+ GQ+ERLLGKF RE+ G + ++D+ +ATKFA YP+R+ V AC+ +L R++ + + +GQLHW+ PL QE A W+GL + G +R VG+SNYGPK +++ H +L G PL S QVQFSL+S + + SLG+ I+YSPLGLG+LTGKY+ N+P GPRG++FR++LP PLL++L+EI RRKTMSQVA+NWCICKGT+PI GVK++ QA ENLGALGW+LS +E+ +L+ A + ++ +QNIFQ++
Sbjct: 62 GFGTWAWGNQLLWGYQESMDSQLQDTFNLALENGINFFDTADSYGTGKLNGQSERLLGKFIREFQGRKAFQDDVVIATKFAAYPWRLTPGQFVNACKSSLHRMQIEQIGIGQLHWSTANYAPL--QERALWDGLVAMHEKGLVRAVGVSNYGPKQLLKIHDYLKARGVPLCSAQVQFSLLSMGRDQMEIKKLCDSLGIRLISYSPLGLGMLTGKYSPSNLPQGPRGLLFRQILPGLEPLLSSLKEIAEKRRKTMSQVAINWCICKGTIPIPGVKSVKQAEENLGALGWQLSADELSQLEYGALESPSKMIQNIFQTS 376 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig331.8884.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig331.8884.1 >prot_H-paniculata_contig331.8884.1 ID=prot_H-paniculata_contig331.8884.1|Name=mRNA_H-paniculata_contig331.8884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=296bp MDEELQEAFNLCVNEGINWFDTADSYGTGKIVGQAERLLGKFAREYPGSAback to top mRNA from alignment at H-paniculata_contig331:30733..40932- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig331.8884.1 ID=mRNA_H-paniculata_contig331.8884.1|Name=mRNA_H-paniculata_contig331.8884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10200bp|location=Sequence derived from alignment at H-paniculata_contig331:30733..40932- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig331:30733..40932- >mRNA_H-paniculata_contig331.8884.1 ID=mRNA_H-paniculata_contig331.8884.1|Name=mRNA_H-paniculata_contig331.8884.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1776bp|location=Sequence derived from alignment at H-paniculata_contig331:30733..40932- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |