mRNA_H-paniculata_contig3309.8878.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A7R9UB56_9STRA (Hypothetical protein n=2 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9UB56_9STRA) HSP 1 Score: 321 bits (822), Expect = 7.600e-101 Identity = 172/309 (55.66%), Postives = 223/309 (72.17%), Query Frame = 2
Query: 206 LTAYERRVIRVVDNVGPAVVSITSSRAPGGIGPPAGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAG-GGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVVLG 1129
L A+E+ +I + ++VGP+VVSI + A G G GSGF + DGYL++NDHV A AA L+ DGR AS+VG+DP+TD+A+LRLN +P+GDS +LRVGQV +AIGNPLGF S+VSTGVVS LGRSLRSQ+GRLIDN+IQTDV LNPGNSGGPLV+S G VIGVNTAII GAQ +SFSVP+++ E+VASQI+ +G V+RGY G+ G +P + R L + + +EV+ VE GPAA G+ PGDW++AFNG A+P +D LY M+ PP E TI+R+G++ N+KV LG
Sbjct: 51 LQAFEQGMIYLAESVGPSVVSILNLDAAG---RTQGQGSGFILSSDGYLMSNDHVVASAA--ALQVMFMDGRTARASVVGTDPATDVAILRLNNDITSLKTLPLGDSDQLRVGQVAVAIGNPLGFQSSVSTGVVSALGRSLRSQAGRLIDNIIQTDVALNPGNSGGPLVDSSGRVIGVNTAIIQGAQAISFSVPINTAEFVASQIMTYGTVKRGYVGIYGVTKPSPTNLVRTLGHKASTFVEVVQVEPSGPAAAAGILPGDWIIAFNGQALPSLDALYSYMTKMPPNTEATFTIIRNGSTVQNVKVKLG 354
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A0T6A756_9BACT (PDZ domain-containing protein n=1 Tax=candidate division NC10 bacterium CSP1-5 TaxID=1640516 RepID=A0A0T6A756_9BACT) HSP 1 Score: 308 bits (790), Expect = 2.650e-96 Identity = 164/304 (53.95%), Postives = 216/304 (71.05%), Query Frame = 2
Query: 188 EDEDDMLTAYERRVIRVVDNVGPAVVSI-TSSRAPGGIGPPAGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDG 1096
E ++D+L AY R V+ V + VGPAVV I RA G GAGSG DG+++TN+HV + ++ LTDGR F A IVG DP+TD+AV+R A G P +GDSS LRVGQ+ IAIGNPLGF STVSTGV+S LGR+LRSQSGRLI+NVIQTDVPLNPGNSGGPLV+S+G VIG+NTA+I AQ +SF+VP+ + WV +++ +G+VRR Y G+ G ARP+SR++QR + + + +EV+ VE GPA GLR GD +VA NG V +DD++RL++ P ++ +TI+RDG
Sbjct: 31 EQDEDLLDAYSRAVVGVAEKVGPAVVGIGVRKRAQGPRVRQEGAGSGVIIAPDGFILTNNHV--VEGAQDVEVSLTDGRMFPAQIVGGDPATDLAVVRAGATG-LPTAELGDSSSLRVGQLVIAIGNPLGFQSTVSTGVISALGRALRSQSGRLIENVIQTDVPLNPGNSGGPLVDSRGRVIGINTAMIFMAQGISFAVPVSTARWVVGELVTNGKVRRAYLGIGGQARPISRRVQRSVESSAATAVEVVSVEAHGPAHRAGLREGDLIVAVNGKGVASVDDIHRLLTGWSPGSQFTLTILRDG 331
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A7S4VAP3_9DINO (Hypothetical protein n=1 Tax=Alexandrium monilatum TaxID=311494 RepID=A0A7S4VAP3_9DINO) HSP 1 Score: 306 bits (784), Expect = 5.430e-95 Identity = 176/356 (49.44%), Postives = 232/356 (65.17%), Query Frame = 2
Query: 131 RVVPRATAGRRS-LSTKRPHEDEDDMLTAYERRVIRVVDNVGPAVVSITSSRAPGGIGPPAGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNA-GGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVVLGDEAAEGGGDKSGPGFLPLPPP 1192
R V RA R++ +S +R ED L AY + V R V+NVGPAVV+I AG GSGF F+ DGY++TNDHV + GL LTD A IVG DP TD+ VLR+ A G P VP+GDS +RVGQ+ +AIGNPLG+AS+VS GVVS LGRSLRSQSGRL+DNVIQTD +NPGNSGGPLV S G+ IG+NTAII G Q ++F+VP +++ +V +QIL++G V+RGYFG+ G ARP+ R +Q +L + +V++V ++ GPA G+ PGD L A +G + MDDLYR++S PP + V ++RD S L L V + ++ GG + LPPP
Sbjct: 14 RAVARAACRRQAPISHRRFASAEDSALDAYSQIVTRTVENVGPAVVAIRHRDG-------AGQGSGFIFSSDGYIVTNDHV--LGESRGLTVTLTDETTLPADIVGRDPPTDVGVLRIPAVGRSLPSVPLGDSGGIRVGQLVVAIGNPLGYASSVSAGVVSALGRSLRSQSGRLVDNVIQTDTAINPGNSGGPLVTSNGQAIGMNTAIIQGTQGLAFAVPSNTISFVVAQILKYGHVKRGYFGIYGGARPVQRALQVRLGLQLPTVVQVAGLDPEGPARRAGILPGDLLCAADGQPIGSMDDLYRVLSMRPPTEPLRVRVIRDLRS-LELTVQVEEDTKPRGGGGTALAPRRLPPP 359
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A521S5S9_9BACT (PDZ domain-containing protein n=1 Tax=Nitrospirae bacterium TaxID=2026887 RepID=A0A521S5S9_9BACT) HSP 1 Score: 305 bits (782), Expect = 6.890e-95 Identity = 171/316 (54.11%), Postives = 216/316 (68.35%), Query Frame = 2
Query: 182 PHEDED-DMLTAYERRVIRVVDNVGPAVVSITSSRAPGGIGPPA-GAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVV 1123
P E D ++L AY R VI VVD VGPAVVS+ A G GP GAGSG FT DGY++TN HV A+ L+ +TDGR+F AS++G DPSTD+AV+R++A G P G+S LRVGQ+ IAIGNPLGF STVSTGVVS +GRSLR GRLI+ +IQTDVPLNPGNSGGPLV+S+G VIG+NTAII AQ +SFSVP+ + +WV Q+L HGRVRRG + G RPL R++ R LH++ +EV+ VE GGP GLR GD +++ N V +DDL+R ++ P + I+R G L L+VV
Sbjct: 41 PVETSDLELLDAYSRAVINVVDLVGPAVVSVMIGGAGRGRGPEVTGAGSGVIFTPDGYILTNSHVVHKAS--RLEVMMTDGRQFQASLIGEDPSTDLAVIRIDAFG-LPYASFGNSRSLRVGQLVIAIGNPLGFQSTVSTGVVSAVGRSLRGVGGRLIEEIIQTDVPLNPGNSGGPLVDSRGRVIGINTAIIRMAQGISFSVPIDTAKWVIPQLLTHGRVRRGILSIGGQQRPLDRRLTRALHLNQSQAVEVISVEPGGPGGRAGLREGDIILSINARIVTSVDDLHRFLAEWPIGDPATLNILR-GIERLKLEVV 352
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A7C1JW05_9CHLR (Trypsin-like serine protease n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A7C1JW05_9CHLR) HSP 1 Score: 304 bits (779), Expect = 1.440e-94 Identity = 170/312 (54.49%), Postives = 218/312 (69.87%), Query Frame = 2
Query: 200 DMLTAYERRVIRVVDNVGPAVVSITSSRA--PGGIGPP--AGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVV 1123
++L AY R VI VV+ VGPAVVSI ++ G P GAGSG DGY++TN HV + A ++ LTDGR F A++VG DP+TD+AV+R+ A G P +GDS LRVGQ+ IAIGNPLGF STVSTGV+S LGR+LRSQ+GRLI+N+IQTDVPLNPGNSGGPLV+S+G VIG+NTAII AQ +SF++P+++ +WV Q+LQHGRVRRGY G+AG RPL R++ R + + +EV+ VE G PA GLRPGD +VA N V +DDL+R ++ P +T+VR G L L VV
Sbjct: 38 ELLDAYSRAVISVVEAVGPAVVSIAVNKTLRDGWRWMPEMTGAGSGVIIAPDGYILTNSHV--VHAARRIEVTLTDGRSFPATLVGEDPATDLAVIRV-AASGLPYATLGDSDALRVGQLVIAIGNPLGFQSTVSTGVISALGRALRSQTGRLIENIIQTDVPLNPGNSGGPLVDSRGRVIGINTAIIIMAQGISFAIPINTAKWVLPQLLQHGRVRRGYLGIAGQGRPLDRRLARFHSLANEYAVEVVSVEPGAPAGQAGLRPGDLIVAINERMVTSVDDLHRFLAEWPIGQPATLTVVR-GREKLALPVV 345
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A1G3R7V9_9SPIR (PDZ domain-containing protein n=1 Tax=Spirochaetes bacterium RBG_16_67_19 TaxID=1802196 RepID=A0A1G3R7V9_9SPIR) HSP 1 Score: 300 bits (769), Expect = 2.730e-93 Identity = 164/305 (53.77%), Postives = 216/305 (70.82%), Query Frame = 2
Query: 182 PHEDEDDMLTAYERRVIRVVDNVGPAVVSITSSRAPGGIGPPAGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDG 1096
P + ++L AY R V+ V + VGPAVV+I +A G G G+GSG T DG+L+TN+HV A L+A +TDGR F A ++G+DP+TD+AV+R++ G P +GDS LRVGQ+ IAIGNPLGF STVS GV+S LGRSLRSQSGRLIDNVIQTDV LNPGNSGGPLV+S+G VIG+NTA+I AQ +SF+VP+++V WV S+++ HG+VRR Y G+ +RP++R++Q L + S SV+EV VE GGPAA GL+ GD + A V +DDL+RL+S P V V ++R G
Sbjct: 23 PTAADTELLDAYSRAVMGVAEKVGPAVVAIRVRKASGRNGAE-GSGSGVILTPDGFLLTNNHVVEEGA--ELEAVMTDGRAFVAQLIGADPATDLAVIRISDGS-LPTAELGDSDALRVGQLVIAIGNPLGFQSTVSAGVISALGRSLRSQSGRLIDNVIQTDVALNPGNSGGPLVDSRGRVIGINTAMIYMAQGISFAVPINTVRWVVSELVMHGKVRRAYLGIGAQSRPVNRRLQHSLGLASPSVVEVAAVEPGGPAAGAGLQRGDLIYALGDALVATVDDLHRLLSKWPAGTAVEVRLLRAG 323
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A846P8R2_9BACT (Trypsin-like serine protease n=1 Tax=Candidatus Latescibacteria bacterium TaxID=2053570 RepID=A0A846P8R2_9BACT) HSP 1 Score: 298 bits (764), Expect = 1.960e-92 Identity = 165/316 (52.22%), Postives = 222/316 (70.25%), Query Frame = 2
Query: 194 EDDMLTAYERRVIRVVDNVGPAVVSI------TSSRAPGGIGPPAGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVV 1123
EDD+L AY R V+ VV++VGPAVVSI SSR+ GAGSG DGY++TN HV A G L LTDG ++ +VG+DP+TD+AV+R+ A G P +GDS+ LRVGQ+ IAIGNPLGF STVSTGV+S LGR+LRS+SGRLI+NVIQTDV LNPGNSGGPLV+S+G V+G+NTA+I AQ +SF+VP + WV +++ G+VRR Y G+ G ARP+SR+MQR L + S +V+EV+ V GGPA + G++ GD +VA +G V +DD++RL++ V +T++R G + L+ +VV
Sbjct: 33 EDDLLDAYSRAVVGVVESVGPAVVSIGIRLSGQSSRSR-----QDGAGSGVVIAPDGYVLTNSHVVENA--GALSVSLTDGSKYTGRVVGTDPATDLAVVRVQASG-LPAAELGDSTLLRVGQLVIAIGNPLGFQSTVSTGVISALGRTLRSRSGRLIENVIQTDVALNPGNSGGPLVDSRGRVVGINTAMINMAQGISFAVPASTARWVVGELIIKGKVRRAYLGIVGQARPISRRMQRGLDLSSTTVVEVVSVAKGGPAQVAGIKEGDLIVALDGERVSSVDDVHRLLTPWTSEKPVTLTVLRLG-NQLDFRVV 339
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A2H5YPU8_9BACT (Serine protease HtrA n=2 Tax=Bacteria TaxID=2 RepID=A0A2H5YPU8_9BACT) HSP 1 Score: 297 bits (761), Expect = 7.050e-92 Identity = 169/329 (51.37%), Postives = 221/329 (67.17%), Query Frame = 2
Query: 188 EDEDDMLTAYERRVIRVVDNVGPAVVSITSSRAPGGIGPPAG--------AGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVVLGDEAAEGG 1150
E+ + +L AY + VI VV+ V PAVVSITS+R G + P G AGSGF T DGY++TN HV + L+ L DGR A +VG DP+TD+AV+R+ G G PV +GDS +LRVGQ+ IAIGNP GF ++V+TGV+S LGRSLRSQ+GRLI+NVIQTD LNPGNSGGPLV+S+ VIGVNTAIIAGAQ MSF++P ++ WVA +++ GRVRR + G+ RP+ ++ R+ + G I V+ V GGPA G+RPGD LV+ +G+ + G+DDL+R +S A V V +VR+G L L V LG E GG
Sbjct: 28 EEAELLLDAYSQAVIAVVEQVAPAVVSITSTRR-GMVRTPRGPAQYDLPGAGSGFLITPDGYILTNSHV--VHGARRLEVTLADGRTLPAELVGEDPATDLAVVRVQ-GSGLPVAELGDSDRLRVGQLVIAIGNPYGFQASVTTGVLSALGRSLRSQTGRLIENVIQTDAALNPGNSGGPLVDSRARVIGVNTAIIAGAQGMSFAIPSNTARWVAGLLIKEGRVRRAFLGITAELRPVPGRIAREQGLTRGVGISVLQVTPGGPADRAGIRPGDLLVSIDGLPLEGIDDLHRFLSRAAIGATVTVGVVREGR-LLTLPVTLGAEPESGG 351
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A4U1HDG8_9BURK (PDZ domain-containing protein n=1 Tax=Trinickia sp. 7GSK02 TaxID=2571161 RepID=A0A4U1HDG8_9BURK) HSP 1 Score: 295 bits (755), Expect = 4.390e-91 Identity = 166/324 (51.23%), Postives = 215/324 (66.36%), Query Frame = 2
Query: 182 PHEDEDDMLTAYERRVIRVVDNVGPAVVSIT-SSRAPGGIGPPA----GAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVVLGDEA 1138
P + +D +L AY R VI + V PAV + RAPGG P + G GSGF FT DGY++TN HV AA G+ L DG ++AAS+VG DP+TD+AVLR+ + P V +G+S +LRVGQ+ IA+GNPLG TV+TGVVS LGRSLRS SGR+I +VIQTD LNPGNSGGPLVNS G+VIGVNTAII GAQ +SF+ + + +WV Q+ HGRVRR Y G+AG P+ R++QR + + + ++VM + +G PAAL GLR GD LVA + VAV G+D L R + V + +VR G L +KVV + A
Sbjct: 23 PIDSDDALLDAYSRTVIGALARVQPAVAYVAVERRAPGGGSPQSAPRGGTGSGFLFTPDGYMLTNSHVIHGAARIGVT--LADGSQYAASVVGDDPNTDLAVLRVGSAEALPHVELGESGRLRVGQIAIAVGNPLGLTQTVTTGVVSALGRSLRSYSGRMIYDVIQTDAALNPGNSGGPLVNSAGQVIGVNTAIIPGAQALSFATAIDTAKWVVMQLFAHGRVRRAYIGIAGTTTPIPRKVQRFFELPAPTGVQVMEIVSGSPAALAGLRAGDTLVAIDSVAVDGIDGLQRALDVSRIGKTVELAVVR-GTQKLVMKVVPSEHA 343
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Match: A0A0W8FJ48_9ZZZZ (Serine protease n=1 Tax=hydrocarbon metagenome TaxID=938273 RepID=A0A0W8FJ48_9ZZZZ) HSP 1 Score: 293 bits (750), Expect = 1.940e-90 Identity = 159/322 (49.38%), Postives = 216/322 (67.08%), Query Frame = 2
Query: 161 RSLSTKRPHEDEDDMLTAYERRVIRVVDNVGPAVVSIT-SSRAPGGIGPPAGAGSGFFFTDDGYLITNDHVAAIAAIGGLKAKLTDGREFAASIVGSDPSTDIAVLRLNAGGGFPVVPIGDSSKLRVGQVGIAIGNPLGFASTVSTGVVSGLGRSLRSQSGRLIDNVIQTDVPLNPGNSGGPLVNSQGEVIGVNTAIIAGAQNMSFSVPMHSVEWVASQILQHGRVRRGYFGMAGAARPLSRQMQRKLHVDSGSVIEVMHVETGGPAALGGLRPGDWLVAFNGVAVPGMDDLYRLMSTHPPAAEVLVTIVRDGASALNLKVV 1123
RS+ + E + ++L AY R VIRVV++VGPAVVS+ R PG GAGSG + DGY++TNDHV + + +L DG ++ +VGSDP+TD+A+L+ +AG P +GDSS L VGQ+ IAIGNP GF+STVSTGV+S LGR+LRS+ GRLI+N+IQ PLNPGNSGGPLV+S+G VIG+NTAII AQ + FS+P +V WV Q++ HGRVRRGY G+ G ARP+ R M + + S +EV+ V+ PA G+R GD +V NG V +DD++R ++ P A + +TI+R G + LKV+
Sbjct: 12 RSVPSADTKESDAELLDAYSRAVIRVVESVGPAVVSVAVGKRVPGQRSEQMGAGSGVIVSPDGYILTNDHV--VMGANSMVVRLADGTPLSSRVVGSDPATDLALLKTDAGN-LPHAVLGDSSSLAVGQLAIAIGNPFGFSSTVSTGVLSALGRALRSRDGRLIENIIQHTAPLNPGNSGGPLVDSRGRVIGINTAIIVMAQGIGFSIPADTVAWVLPQLMAHGRVRRGYLGITGQARPIDRSMALFHRLSAESAVEVVSVDRSSPAGRAGVRVGDLIVGINGTDVKHVDDIHRFLAAWPIAETLELTIIR-GRQRVVLKVM 329 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3309.8878.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3309.8878.1 >prot_H-paniculata_contig3309.8878.1 ID=prot_H-paniculata_contig3309.8878.1|Name=mRNA_H-paniculata_contig3309.8878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=391bp MRRVASMMIRNHIIQLTVMISRKSRSAFFLSQCRRVVPRATAGRRSLSTKback to top mRNA from alignment at H-paniculata_contig3309:4059..15077+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3309.8878.1 ID=mRNA_H-paniculata_contig3309.8878.1|Name=mRNA_H-paniculata_contig3309.8878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=11019bp|location=Sequence derived from alignment at H-paniculata_contig3309:4059..15077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3309:4059..15077+ >mRNA_H-paniculata_contig3309.8878.1 ID=mRNA_H-paniculata_contig3309.8878.1|Name=mRNA_H-paniculata_contig3309.8878.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2346bp|location=Sequence derived from alignment at H-paniculata_contig3309:4059..15077+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |