mRNA_H-paniculata_contig3304.8870.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3304.8870.1
Unique NamemRNA_H-paniculata_contig3304.8870.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: A0A094D6B7_9PEZI (HET domain-containing protein n=2 Tax=unclassified Pseudogymnoascus TaxID=2637121 RepID=A0A094D6B7_9PEZI)

HSP 1 Score: 82.0 bits (201), Expect = 4.760e-12
Identity = 63/196 (32.14%), Postives = 92/196 (46.94%), Query Frame = 1 
Query:  337 LHRAIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAV----------LCAKGLG--------------------RIAVVRALCKSGPDLEATFEGLRPLHIAAGHGDDTLLRVLLEEGANKDAVTTD----GFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQV 822
            LH A ++G  + V+ LL QGA  A+D  +  G T LH A+          L  +G                        +++R L +  P+L++   GL  L +A   GD+T++RVLLE GA+  A TT     G S LH A        + LL+  G D N+    PE +T LH AA  G+ + V EL++ GA +
Sbjct:   47 LHDAASKGQTDTVAQLLNQGA--AVDQPNHEGATALHLAIKECHPPTTHLLLTRGANIEPPYGPTSSKPIHLAAFSLNPSLMRILLQHKPNLQSRTNGLTALFLAISAGDETVVRVLLEAGADARARTTSEEGTGESVLHMAVGSFKNALLPLLIRYGADVNVAGTNPEGQTALHIAAQYGNVEAVEELVKAGADI 240
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BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: A0A7X3XUE7_9BACT (Uncharacterized protein n=3 Tax=Gemmatimonadetes bacterium TaxID=2026742 RepID=A0A7X3XUE7_9BACT)

HSP 1 Score: 79.7 bits (195), Expect = 1.620e-11
Identity = 62/163 (38.04%), Postives = 82/163 (50.31%), Query Frame = 1 
Query:  346 AIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDLEATFE--GLRPLHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQVDV 828
            A  RGD E V  LL QGA +     DG  +T LH A         IA+ +AL  +G    AT    G  PLH+A+  G   + R++LE+GA+ D +T+ G +A+H AA   A   +  L   G D + +    E RTPL  AAVRG    V  LL  GA V +
Sbjct:   51 AAERGDLEAVRALLRQGADVNTAQSDG--MTALHWAA----SNNDIAIAKALLYAGATYRATTRIGGYTPLHLASRGGHAEVARLILEDGADPDILTSTGVTAMHFAADADAAEVIEALAAHGGDVDARDSFAE-RTPLMFAAVRGADAAVRTLLNAGADVSL 206
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BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: UPI001F5DC8A4 (26S proteasome non-ATPase regulatory subunit 10-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DC8A4)

HSP 1 Score: 76.6 bits (187), Expect = 4.640e-11
Identity = 63/165 (38.18%), Postives = 88/165 (53.33%), Query Frame = 1 
Query:  346 AIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDLEATFEGLRPLHIAAGHGDDTLLRVLLEEGAN-KDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQVDVTDS 837
            A+ARG+ E+V   L+QGA     + DG   TPLH A    KG   + +V  L   G +  +   G   LH+AA HG D +++VLL+  A+ K A++    +AL  A    +L CV LLLE G D +    G    TPL  AA+ G  DI+  L+  GA  +VTD+
Sbjct:   27 AVARGNMELVRYFLDQGADKEKLNDDGY--TPLHLAT--GKG---VEMVDLLLSKGANPNSLNHGGTALHLAAIHGQDDIMKVLLDHHADHKLALSGTDHTALVLATVACSLKCVKLLLEAGADVD----GIGKDTPLIIAAIDGSTDILKCLVLAGADANVTDT 180
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BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: UPI0018AE4E3C (protein VAPYRIN-like n=1 Tax=Dioscorea cayennensis subsp. rotundata TaxID=55577 RepID=UPI0018AE4E3C)

HSP 1 Score: 76.6 bits (187), Expect = 1.180e-10
Identity = 68/210 (32.38%), Postives = 93/210 (44.29%), Query Frame = 1 
Query:  199 LYFAGEVKMTGIPDDQLLLQIMDHHRVEDSEEGESLEWR-----HRFCSALLHRAIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDLEATFEGLRPLHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCG 813
            ++F G   +T +  D  +        V +  E    EWR           LLH +I R   ++V  LLE    L   +R   G TP+  A    + L    +V  L       E      R LH A   G   ++R+LL +GA  +AVT+DG +ALH AA +    C  LLL  G   +++ GG E  TPLH AA  GD  +V  LL  G
Sbjct:  133 VFFVGSAVLTRLVSDGAM------ETVREVLEKSEPEWRAVDSVDAHGETLLHLSIVRSRPDLVQMLLEFEPNLEKANR--AGRTPIEEAAAAGESL----IVELLLARRASTE------RSLHHAVAAGHTEVMRLLLLKGAEVNAVTSDGRTALHLAACERRWDCARLLLASGARTDVR-GGEEGNTPLHVAAACGDEKMVRVLLGKG 323
[Close]
BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: UPI001F5E268B (ankyrin repeat domain-containing protein 65-like n=1 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5E268B)

HSP 1 Score: 75.5 bits (184), Expect = 1.430e-10
Identity = 61/165 (36.97%), Postives = 85/165 (51.52%), Query Frame = 1 
Query:  346 AIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDLEATFEGLRPLHIAAGHGDDTLLRVLLEEGAN-KDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQVDVTDS 837
            AI R + ++V   L+QGA   +   +  G  PLH AV      G   +V  L   G  ++A   G   LHIAA HG D +++VLL+  A+ K A+   G++AL  A A  +L CV LLLE G D +    G    +PL  AA  G  DI+  L+  GA  ++ DS
Sbjct:  153 AIGRQNVDLVRYFLDQGAD--VHKVNDSGTPPLHLAV---GEEGSCEIVELLLSKGAYVDALNLGGTALHIAARHGRDDIMKVLLDHHADHKIALGGAGYTALFIATAMCSLKCVKLLLEAGADVD----GACKESPLMIAATAGSTDILKCLVLAGADANIPDS 308
[Close]
BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: W9WL24_9EURO (Uncharacterized protein n=1 Tax=Cladophialophora psammophila CBS 110553 TaxID=1182543 RepID=W9WL24_9EURO)

HSP 1 Score: 74.3 bits (181), Expect = 7.860e-10
Identity = 64/180 (35.56%), Postives = 83/180 (46.11%), Query Frame = 1 
Query:  337 LHRAIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIA-----VVRALCKSGPDLEATFE--GLRPLHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKGALPCVAL------LLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQVDVTDS 837
            LH    R   E V  LLE+GA    D+ D  G T LH A+     + R +      +R LC +GP      +   L PLHIA+GH     + +LLE+GA  DAV  DG +ALH AA                LL +     ++    +  TPLH AA  G    V  LLR GA+VD  D+
Sbjct:  374 LHIVSGRSWAEAVKHLLERGAEA--DAVDNDGRTALHLALNSTNKVSRYSRKDTRTIRYLCLNGPAQVNMKDKRSLTPLHIASGHSWAEAVELLLEQGAEVDAVDVDGRTALHLAANSHVNRHEHFDTRTIDLLSLDNRTQVRMRDKQGLTPLHLAASLGRTRAVELLLRRGAEVDAVDN 551
[Close]
BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: A0A6H5K1F4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1F4_9PHAE)

HSP 1 Score: 72.4 bits (176), Expect = 2.560e-9
Identity = 105/407 (25.80%), Postives = 151/407 (37.10%), Query Frame = 1 
Query:  337 LHRAIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDLEATFEG-----LRPLHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKS-GGPESRTPLHAAAVRGDPDIVGELLRCGAQVDVTDSDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPADVLK----GYLMEDGRGHGNPTL---------------VNMISWMLARAPADRAWRRKSGIVMMRGQFTRQWAAGKGGDDERVTE--TG---------DALSSVMGKA-----GRECGQRRQCWGNIGGDAEAVAGGHWSLWLRSAVEISEEGIFRTIVSFV 1434
            LH A A G+  VVSTLL   A   +D+ D  G++PL   ++ ++G G  + V AL ++G D+     G     +  + +A   G   ++  ++E G N  A  T G +ALH A  +GA   V +LL+ G D N K+       TPL    +    + V  LL+ G  V+ T+                                                                      TP+D+LK     Y   D  G G+ T                +     +LARAPADR WRR+  +VM+R +  R   A   G     TE  TG         D  +S +GK      G   G      G  G      A G   L + + V +  E +FRTIV F+
Sbjct:  176 LHLAAASGNNRVVSTLLGN-AMTDVDALDSRGVSPL---MVASEG-GHCSTVEALLRAGADMNLRHAGGAHLGMTAMDVAVSKGHVGVIEAIVENGGNVRATDTYGLTALHHA--RGA-QAVDVLLDAGADVNAKACPALHGFTPLSVCVMDNSCEAVVALLKRGGNVNDTNC------------------------------GGLSALHLTCGSLSRGMDRMVDLLLRWGASETAVNKNGLTPSDILKVTTAEYHARDAGGDGSATRCVGGSATRHDSLTKEIQRARVLLARAPADRTWRRRCWLVMLRARAERGRGAPSSGSGSDRTEAATGRNLPRHEEADGDNSKVGKTDAGAVGEGSGPTDGERGRDGRATRGAAAGEGGL-VPALVGLESEEVFRTIVCFL 543
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BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: A0A0B4ETV9_METAF (HET domain-containing protein (Fragment) n=1 Tax=Metarhizium anisopliae (strain ARSEF 549) TaxID=1276135 RepID=A0A0B4ETV9_METAF)

HSP 1 Score: 72.0 bits (175), Expect = 5.580e-9
Identity = 61/180 (33.89%), Postives = 84/180 (46.67%), Query Frame = 1 
Query:  289 EEGESLEWRHRFCSALLHRAIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRA-VLCAKGLGRIAVVRALCKSGPDLEATFEGLRPLHIAAGHGDDTLLRVLLEEGANKDAVTT-DGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQV 822
            ++G S+    R  S  L  AI  G   VV  LL++GA   +D   G    PL +  V  A       ++  +    P LE    G+ PL  A   GD+ ++R+LL+ GAN  A T  DG S LH A        + LL+  G D N  S  P   T LH AA  G+ D + EL++ GA +
Sbjct:   72 DQGASINALDREGSTALQLAIRNGHERVVKLLLDRGAD--VDRPCG----PLSKKPVYLASYSMNPTMMEIVLSHNPYLEFEGTGMTPLLAAVTAGDEDVVRLLLQAGANVGARTVKDGHSVLHLAVTYFKQSMLPLLVRSGADVNASSTDPPGLTALHVAAQVGNDDALRELIKAGANL 245
[Close]
BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: A0A3Q9ADS3_9HYPH (C-type cytochrome n=9 Tax=unclassified Mesorhizobium TaxID=325217 RepID=A0A3Q9ADS3_9HYPH)

HSP 1 Score: 67.8 bits (164), Expect = 2.080e-8
Identity = 57/164 (34.76%), Postives = 80/164 (48.78%), Query Frame = 1 
Query:  328 SALLHRAIARGDGEVVSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDLEAT-FEGLRP-LHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCG 813
            +A +H A  +GD   ++  L+ GA   +D  DG   TPL+ AV      G  A  + L + G D+ A    GL P L  A       L+ +LL+ GAN ++    G +ALH A   G L CV  L+E G D N K+   + +T LH A  +G  D+   LL  G
Sbjct:   21 AAAIHDAAKKGDVAAITAALDAGA--GVDESDG-SATPLYLAVRA----GHFAAAKLLIERGADVNAAPTPGLGPALMPALAKRRVDLINLLLDGGANPNS-DRGGQAALHVAVTLGCLDCVKALVEAGADVNAKT--KDGKTALHLAKRKGQRDVADYLLSHG 174
[Close]
BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Match: D7FXA8_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXA8_ECTSI)

HSP 1 Score: 68.2 bits (165), Expect = 4.840e-8
Identity = 98/397 (24.69%), Postives = 152/397 (38.29%), Query Frame = 1 
Query:  337 LHRAIARGDGEVVSTLLEQGARLAIDSRDGVGL-TPLHRAVLCAKGL----------------GRIAVVRALCKSGPDLEAT-FEGLRPLHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKGALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQVDVTDSDLTTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSTPADVLKGYL--MEDGRGHGN---PTLVNMISWMLARAPADRAWRRKSGIVMMRGQFTRQWAAGKGGDDERVTETGDALSSVMG--KAGRECGQRRQCWGNIGGDAEAVAGGHWSLW--LRSAVEI----SEEGIFRTIVSFV 1434
            L  A+  G  ++V  LL  GA   +  R   G  TPLH A    +GL                G +A V+ L  +G D +    +    L  AA +    +++ LLE G + + V  D ++ LH AA   +  C+ +LL+ G D ++K    + RT LH AA  G+ + +  LLR GA V  T  D +T                                                                  P D+ K      +  R  G+   P L   I  +LARAPADR WRR+  ++M+R +  ++     GG   +  + G+    ++G  K G     RR       G +    GG  ++   LR  V +      +G+FRTI+ ++
Sbjct:  141 LFAAVKAGCDDLVGNLLMAGANPNVIVRHSFGHGTPLHAAA--KQGLANTASVLLSSPSTDKNGHVATVKVLLAAGADTDIRDLDSHSALVFAAQYERIDVMKALLEHGVDVN-VGEDHWNPLHWAAQFNSTGCITVLLDAGADIDVKCSFLDGRTSLHFAAETGNNEALLALLRRGANVHQTTDDGSTALHLVSEMEGHAPDDTVDILLRRGASEQAVDRNG------------------------------KAPVDLFKRVQRRFQSARPMGDSEWPELERAIE-LLARAPADRTWRRRCWLIMLRERTNKERTI-HGGRRRKGKKVGNGEGLLLGDGKRGGSNNVRRS------GRSRGRGGGRAAVEVDLRGLVSVLVCLESDGVFRTILGYI 496
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3304.8870.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A094D6B7_9PEZI4.760e-1232.14HET domain-containing protein n=2 Tax=unclassified... [more]
A0A7X3XUE7_9BACT1.620e-1138.04Uncharacterized protein n=3 Tax=Gemmatimonadetes b... [more]
UPI001F5DC8A44.640e-1138.1826S proteasome non-ATPase regulatory subunit 10-li... [more]
UPI0018AE4E3C1.180e-1032.38protein VAPYRIN-like n=1 Tax=Dioscorea cayennensis... [more]
UPI001F5E268B1.430e-1036.97ankyrin repeat domain-containing protein 65-like n... [more]
W9WL24_9EURO7.860e-1035.56Uncharacterized protein n=1 Tax=Cladophialophora p... [more]
A0A6H5K1F4_9PHAE2.560e-925.80Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A0B4ETV9_METAF5.580e-933.89HET domain-containing protein (Fragment) n=1 Tax=M... [more]
A0A3Q9ADS3_9HYPH2.080e-834.76C-type cytochrome n=9 Tax=unclassified Mesorhizobi... [more]
D7FXA8_ECTSI4.840e-824.69Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3304contigH-paniculata_contig3304:7609..13346 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score95.5
Seed ortholog evalue6e-17
Seed eggNOG ortholog29760.VIT_14s0081g00150.t01
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ankyrin repeat
EggNOG OGs37HF2@33090,3G8J9@35493,COG0457@1,COG0666@1,KOG0504@2759,KOG0548@2759
Ec32 ortholog descriptionAnkyrin repeat-containing domain
Ec32 orthologEc-17_001940.1
COG Functional cat.O
Best tax levelStreptophyta
Best eggNOG OGNA|NA|NA
Exons4
Model size2991
Cds size1215
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3304.8870.1prot_H-paniculata_contig3304.8870.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3304 9482..13124 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930022.2749214-UTR-H-paniculata_contig3304:7608..91601622930022.2749214-UTR-H-paniculata_contig3304:7608..9160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3304 7609..9160 -
1691481113.9838223-UTR-H-paniculata_contig3304:7608..91601691481113.9838223-UTR-H-paniculata_contig3304:7608..9160Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3304 7609..9160 -
1622930022.295221-UTR-H-paniculata_contig3304:9479..94811622930022.295221-UTR-H-paniculata_contig3304:9479..9481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3304 9480..9481 -
1691481114.0003135-UTR-H-paniculata_contig3304:9479..94811691481114.0003135-UTR-H-paniculata_contig3304:9479..9481Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3304 9480..9481 -
1622930022.3610144-UTR-H-paniculata_contig3304:13124..133461622930022.3610144-UTR-H-paniculata_contig3304:13124..13346Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3304 13125..13346 -
1691481114.0310318-UTR-H-paniculata_contig3304:13124..133461691481114.0310318-UTR-H-paniculata_contig3304:13124..13346Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3304 13125..13346 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930022.3125863-CDS-H-paniculata_contig3304:9481..103731622930022.3125863-CDS-H-paniculata_contig3304:9481..10373Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3304 9482..10373 -
1691481114.00802-CDS-H-paniculata_contig3304:9481..103731691481114.00802-CDS-H-paniculata_contig3304:9481..10373Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3304 9482..10373 -
1622930022.3304203-CDS-H-paniculata_contig3304:11911..120551622930022.3304203-CDS-H-paniculata_contig3304:11911..12055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3304 11912..12055 -
1691481114.0155973-CDS-H-paniculata_contig3304:11911..120551691481114.0155973-CDS-H-paniculata_contig3304:11911..12055Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3304 11912..12055 -
1622930022.3462665-CDS-H-paniculata_contig3304:12945..131241622930022.3462665-CDS-H-paniculata_contig3304:12945..13124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3304 12946..13124 -
1691481114.02332-CDS-H-paniculata_contig3304:12945..131241691481114.02332-CDS-H-paniculata_contig3304:12945..13124Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3304 12946..13124 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3304.8870.1

>prot_H-paniculata_contig3304.8870.1 ID=prot_H-paniculata_contig3304.8870.1|Name=mRNA_H-paniculata_contig3304.8870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=405bp
MTGIPDDQLLLQIMDHHRVEDSEEGESLEWRHRFCSALLHRAIARGDGEV
VSTLLEQGARLAIDSRDGVGLTPLHRAVLCAKGLGRIAVVRALCKSGPDL
EATFEGLRPLHIAAGHGDDTLLRVLLEEGANKDAVTTDGFSALHCAAAKG
ALPCVALLLEIGVDANLKSGGPESRTPLHAAAVRGDPDIVGELLRCGAQV
DVTDSDLTTALHIAAANGNLEVARCVIEAGANVNVTNVEGDTPLHLACMM
LNHRVAKLLLSREADETAVNKYNSTPADVLKGYLMEDGRGHGNPTLVNMI
SWMLARAPADRAWRRKSGIVMMRGQFTRQWAAGKGGDDERVTETGDALSS
VMGKAGRECGQRRQCWGNIGGDAEAVAGGHWSLWLRSAVEISEEGIFRTI
VSFV*
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mRNA from alignment at H-paniculata_contig3304:7609..13346-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3304.8870.1 ID=mRNA_H-paniculata_contig3304.8870.1|Name=mRNA_H-paniculata_contig3304.8870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5738bp|location=Sequence derived from alignment at H-paniculata_contig3304:7609..13346- (Halopteris paniculata Hal_grac_a_UBK monoicous)
GTGCCCTTTTCTCTCCAACTTCCTTTCCAAGCTGACATAAGGAAGCAGCT
GACCGAGATGTTCGGTATCACTGCCACAATGATGAATATGGCAAAATTAT
TACTTATGTTCCGCTACGCCGGTTCGGACGATCGTTCTATATTGCGTTGC
TTAGGCAGCTGAGAGGGGCTACAGCGCACAAAGCACTTGTGGCACTGGCT
CTATTTTGCTGGCGAAGTGAAAATGACCGGCATTCCGGACGATCAACTCC
TGCTGCAAATCATGGACCATCATCGGGTCGAAGATAGTGAAGAAGGTGAA
AGCTTGGAGTGGCGACATCGCTTTTGCAGCGCTCTGCTGCATCGGGCGAT
AGCGAGGGGGGACGGCGAGGTTGTGTCGACATTGTTGGAGCAAGGTGCCA
GGTACGCATAGTTGGGATGAGGTTCTCCCGCGTTGGTATAGGGAGAGGCA
GGCGTAGGCTGGCGACTTCAACTCTTAAATTTAATTCATTTCAAATCTCG
TTTAGACAAATATAGTCAGTACCTACATGGAGAATCACCTCGGCTGGTTG
AAACTACACATGGAGAGTTGGAACACGTGTCTGCCCCTCGTTCACTCGTT
TGGCCTACACAACAAGTACATTATATTAAGGCTGCACAGTGAGTTGTGTC
TTGGACGCCAGCAAAAAGCTCGGGCAGATAGAGTATTCAACCTGTACATA
TAGTACCATCCGGAAAACAAATAGGATGTGCATGTGTGACTGGTCGCCGG
GTATACGACCATCTGGTGACTATCTGTAGAGTGACCCTCCAAGACTTGTA
AACGAATAAATATGTGTCTACCCGAGACAAATAATGATGGTTCGAGATAG
TTGCGAATACTCCATTCGTATTTGTCCGAGAGGTGAAGCTTTGTTCATTT
GTCTGTTCCGTGCCAAGTTTTCACTGGCCGGTCAAATACGAATAATTGGC
GTATTCGCCATGAAAACAAAAAAAAGTATTCGATTGAGTTTCAGAATGAG
CGGACACATAGAATGAAGTACCCACCCCTGTTCATTCCATTTACGACTAT
TATTGGCAGTCATGGATGGTCCGGGGCACGTATAATACACAAGTTCATTC
TGAAACCCAGGCGAATAATTTTTCAATTTTGTAGCGAATACGCCAATTAT
TCGTACGTATCCGGGAGGTGCAAGCATTGTTCGTCACTTGTCTTTGTTCC
GTTCCACGTACGTGCGTCTGGAGTTTCCAATTCTTGAAAAATCGAATATG
ATGGTGTTGCCATTTCGGCCCACCCCTACCGGCACGCGCAGGTTGGCGAT
CGACAGTCGCGATGGTGTTGGCTTGACCCCTCTACACCGAGCCGTGTTGT
GTGCGAAAGGCCTAGGGCGAATAGCCGTGGTACGGGCGCTATGTAAATCG
GGACCAGACCTGGAAGCAACCTTCGAGGGACTGAGGTTTGTACCCGTTTG
TTGGTCTATGGTTCGCAGTTGCATCGGCATTGTGACCTCAGCGCGCGTGA
GTGATCAGTATACATACGTCCTATTTACATATTTACATACCTGGTATGTT
CGATTCCTTTGTTGTACGCTGACACGGCTTCCCCCTTTGACTCGCAGTCG
CACGCCTGTCGCAGAAACACGTTCTTTGTTATTATTACCTCTCGGTCCGC
CCTCTCTGGTAGTCACCTCTACTATAGTCCGACTAATGAACTCACTAGAG
AGAAACCTTGGCTTGGTTGGCAAATGATGGAAGTCAGCTAGGTGGGGCTC
TCCCTCTTCTACTCTCAGACATCTAGATCAACTCAATTATGCAAATATCC
AACGCCCCAATCCTGCTAGAGAGAAAACGAATCGTTCCCCAGAACCCTGG
AACCGTTCCCTCTGGTATGGAACGGTTCATACGAAATTCCTCTATTCTGC
CGCATTTATCTTACCTAGTCTCATAGTGCGATACCTCTCTTATTCTACTG
TTAATGATCTGTTCAGCATCAAACGCGAATATGGTCATATTTGCACGTTT
CGAGGAAACTAGTATCGTGGCTACCCTCGGCCAGCTCTTCAGAAAACTAC
TACTAGTAGACTGTAGGTTGGGAATCTCGGTATTATGTTGCGTTTTTAGG
AGAGGCGGTTGCCTCGCAGAAAGCGATGTTACTGTCAGTGTTGGCTGACG
CAAGTGCTTCGTTCTCTTCGCCACTCCTGCCTGATTGTCACGTGCCAGTT
AACCAAATGACAGACGAAACACAAAAACTCACATACTGCATAAATCAAAG
ACATGTTTTTTGTTCGTGTTATTTTGTGGACTTTAGTTTTTGTTTCAGGG
TTAACGGGGAGGAAAACATTGTAAACTTCAAATTCAATTGCAGAGAAATT
GGAGGCATAATGCATTCTTGCCTTTTGTATCCACATGGTTCGACTTCGAG
ACTTCTGGAATTCAATGAAACCAATTAGACGATTAGCCAAAAGGACGTTT
TGTCTCTACAGGTGATAGGATATTTTATGTCCTGACCGTGGCCGCCGTTT
CGTCGCTTACTCTAGCGACTGCGTTGGACAAGGTGACGGTTCTGGCACAC
GTCAGTGACAGTCATAAGAGTGTGCTCCCGATGCTTTTCCCGACCCTTCT
TTGTGCAGGGTTTGCACCCGTTTGGTGGTTGTTTCCAATACAAGTGTTTT
GTGTTGCTCGGTCGATGTACGCCTACCTCATCCTCTAGCTCCGACCCTGA
GTCCAACCCGGCCCACGAAGTCGAGAAACCATAGTGTTGCGGACACTGTA
CGCTGTTTGGTCCGATTCAAGCTCCGGTCGTTAATACTACCACGAGCAAC
TACAATATGCCACCGGGTTTTGTGCTTGCAGAGCTCTATAATCGTGCTCT
TAAGCTGCGAACATTCATTACTTGGTAGATGTTCCGGACAAGCGATGAAA
TCATACTGCAGTAATCCTTGATGGAACGATCAATTCCACCGTATTTTCCC
GCTCTCCCCACTTTACCACACAGACCTTTACACATAGCTGCTGGTCACGG
AGACGACACCCTGTTACGGGTGCTGCTCGAAGAAGGCGCAAATAAGGATG
CCGTTACAACCGATGGATTTTCCGCTCTCCATTGTGCTGCGGCCAAAGGT
GCATTGCCCTGTGTCGCTCTCCTACTTGAGATCGGCGTAGACGCTAATTT
GAAAAGCGGTGGACCGGAGAGTCGCACTCCTCTGCACGCCGCTGCGGTGC
GTGGAGACCCGGATATAGTTGGAGAGCTCCTACGATGCGGTGCCCAGGTG
GATGTTACCGATTCGGACTTAACCACGGCCCTCCACATCGCTGCTGCGAA
TGGCAATCTTGAGGTGGCGCGGTGCGTGATAGAAGCCGGCGCAAATGTAA
ACGTGACGAATGTGGAAGGGGACACCCCTCTGCACCTAGCCTGCATGATG
CTCAACCATCGTGTGGCAAAGCTTCTGCTTTCACGGGAGGCCGATGAAAC
GGCCGTGAACAAGTACAACAGCACCCCTGCCGACGTGTTGAAGGGTTACC
TAATGGAGGATGGACGGGGGCACGGCAACCCTACTCTGGTGAATATGATT
TCTTGGATGTTGGCGAGGGCTCCCGCCGATAGGGCTTGGCGTCGTAAGAG
CGGGATTGTGATGATGCGGGGTCAGTTCACTAGGCAATGGGCAGCGGGCA
AAGGTGGGGACGACGAGCGGGTGACGGAAACGGGTGACGCATTGTCATCG
GTGATGGGCAAGGCGGGTAGAGAATGTGGCCAACGTCGGCAATGTTGGGG
TAACATCGGAGGCGATGCTGAGGCCGTCGCTGGAGGGCATTGGTCGTTGT
GGCTTCGTAGCGCGGTGGAGATATCAGAAGAAGGAATATTCCGCACTATC
GTGAGCTTCGTTTGAAGGTGAAAACGAGCTCTATAGTATATAAGGGTGAT
TACAGTCATTCGACGCTGCCACAGCATATATGTCACGCCGTGCGATGCGA
GGACTACAGCAGTAGCTGTCGGCAGGCTTGTGTTGTTTTGCGTTTCTAAA
GCCTTTCTTCGCGTTGGCCGTATCATCCATGCCTGGCCTTTTTGATGAGT
GTTTCGACCGATCCATCGGTGATTGCCCATAACGAACGACTTCTGGTATA
TTATAATGATGCCGACATGCTTTCTCCGTTCACCGTCATCGTGCGCGTTC
CTTCGCTATTGCTGCTGCCGCCACCGCTGGTGACAGGCAAGAGAGGCAGC
TTACATGGTCAATGATTGAATTCGCGGTGGAGAACTACGATGATGCTTCA
ACGGTAATACTTTCGTTCGGTCTTTCAGTAGTAATATTTTGTCCTTTTGT
TACCTATACCCATTTCATGCGGGCAAGGATTTATTTTGTTTGCACGTTTC
CCCTCCAAGAGTTTGGGGTTAGGGTGCTAATCGGCCAGTCGGTATTGCGG
GGTGTATCGACATGAGCTTGACCCCTGAAAACGGGTGATTTATATACTAC
GTGGAATCTCGCTCGTCACAGCGCCAGCGGCCACGTAAAACATTTTTGAA
ATGTCCCAGTTTTGGAACGTTGTGCTTGAAGTCCAAGTGCTCTCGTTTGG
TTTGCTACAAATATTGTATGGCATACTATAGGAAGATTGTGACCGTGTGG
GTTGCGTATTTGCCGTGTTTCAAGCTCCTCTTTGGTAGGCAGCCGCCCAA
AAAATTATGCCGCTATGACGGTGATGAGCTATCTGCAAGACACCGTCCAT
GTACCTGTCTACGATACCAATGGCTTACTACTGGACTGCAATATAATTGT
AGTTGTGTCCGCCGTTTTGTGCTGAAACCTGGCAAAGAGACACCCTTGGT
AATCAATATTTTGATCGAATTTTGGAATTTCTGAAAAAATTAATGTGAAT
ATGTTGTTCAAATAGTTATATTTGTACTGTGCTGTACTGTACTTTCCCTC
CCAGGGTACTGTAGTCCTTGGTAATGCTCGTCGGCGATTTCTAATATACC
CGTTTCTGCTTGGCTACGCACTGCGTGTGAACATGCTTCACACCCCTCAT
GTGCCGGGAAAGTGGCGTAGTTTCGGCTTTGTGCGATAAAGGAACAAAGT
TGAGTTGTAGATACTGTTTCCTCTGCATCCTTCGTGATCCCGAATTGATG
TATGTAATAACCCTTGGGTTCATTGTACGTGGGTAGCTGTGCGGGCGCCG
GTGTGGGAATTCAGCGTTTGAGTTTGTCCCGACAATATTAATCGGCAAGG
GAAAGCTAATGTGGGATGGAGTAGGGTGATGTGCATGGTATTGATGTACG
TATTGAGCGCTTTATTTTCTGTTAAGAGAGGTGGTTGAGGGTACAGTAGC
CGAAAGTTGTACTCCGGACCGGAGCAACATCTCGCCCTTCTATAAATCTT
TTCACATGGGAGAAGCTGCACAGCATCAGCATTGCGGAAGGATTCTATAT
GTTACTAATTCAGCGTATTCCGCGCTGAGAATCTGATATAACGTGAATTA
CAGAAAGATAGTGTGGCTTATATTGTTGATGTTGTTTGGTACCTCGGACG
ATGGACAAAGGGTCTGATATCGGCGCTAAATTTTGTGCAGACCTTCGTGC
TTACTACAGGTTTTAACGGTTCGCCAAGTACGATTTTTCGGCAAGGGTCT
AGAGGAGTGCTAAGTATGACAACAAAAACTTGCCGAAGATCAAGTTTCTA
AAAAAACGCGCGAGTGGAAACATGAAAATTCGCTCAAAGTCTGGTAACCA
CAGAATGTGACACGAAAAATTGCCGAAGGGTGAACAAG
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Coding sequence (CDS) from alignment at H-paniculata_contig3304:7609..13346-

>mRNA_H-paniculata_contig3304.8870.1 ID=mRNA_H-paniculata_contig3304.8870.1|Name=mRNA_H-paniculata_contig3304.8870.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2430bp|location=Sequence derived from alignment at H-paniculata_contig3304:7609..13346- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGACCGGCATTCCGGACGATCAACTCCTGCTGCAAATCATGGACCATCA
TCGGGTCGAAGATAGTGAAGAAGGTGAAAGCTTGGAGTGGCGACATCGCT
TTTGCAGCGCTCTGCTGCATCGGGCGATAGCGAGGGGGGACGGCGAGGTT
GTGTCGACATTGTTGGAGCAAGGTGCCAGATGACCGGCATTCCGGACGAT
CAACTCCTGCTGCAAATCATGGACCATCATCGGGTCGAAGATAGTGAAGA
AGGTGAAAGCTTGGAGTGGCGACATCGCTTTTGCAGCGCTCTGCTGCATC
GGGCGATAGCGAGGGGGGACGGCGAGGTTGTGTCGACATTGTTGGAGCAA
GGTGCCAGGTTGGCGATCGACAGTCGCGATGGTGTTGGCTTGACCCCTCT
ACACCGAGCCGTGTTGTGTGCGAAAGGCCTAGGGCGAATAGCCGTGGTAC
GGGCGCTATGTAAATCGGGACCAGACCTGGAAGCAACCTTCGAGGGACTG
AGGTTGGCGATCGACAGTCGCGATGGTGTTGGCTTGACCCCTCTACACCG
AGCCGTGTTGTGTGCGAAAGGCCTAGGGCGAATAGCCGTGGTACGGGCGC
TATGTAAATCGGGACCAGACCTGGAAGCAACCTTCGAGGGACTGAGACCT
TTACACATAGCTGCTGGTCACGGAGACGACACCCTGTTACGGGTGCTGCT
CGAAGAAGGCGCAAATAAGGATGCCGTTACAACCGATGGATTTTCCGCTC
TCCATTGTGCTGCGGCCAAAGGTGCATTGCCCTGTGTCGCTCTCCTACTT
GAGATCGGCGTAGACGCTAATTTGAAAAGCGGTGGACCGGAGAGTCGCAC
TCCTCTGCACGCCGCTGCGGTGCGTGGAGACCCGGATATAGTTGGAGAGC
TCCTACGATGCGGTGCCCAGGTGGATGTTACCGATTCGGACTTAACCACG
GCCCTCCACATCGCTGCTGCGAATGGCAATCTTGAGGTGGCGCGGTGCGT
GATAGAAGCCGGCGCAAATGTAAACGTGACGAATGTGGAAGGGGACACCC
CTCTGCACCTAGCCTGCATGATGCTCAACCATCGTGTGGCAAAGCTTCTG
CTTTCACGGGAGGCCGATGAAACGGCCGTGAACAAGTACAACAGCACCCC
TGCCGACGTGTTGAAGGGTTACCTAATGGAGGATGGACGGGGGCACGGCA
ACCCTACTCTGGTGAATATGATTTCTTGGATGTTGGCGAGGGCTCCCGCC
GATAGGGCTTGGCGTCGTAAGAGCGGGATTGTGATGATGCGGGGTCAGTT
CACTAGGCAATGGGCAGCGGGCAAAGGTGGGGACGACGAGCGGGTGACGG
AAACGGGTGACGCATTGTCATCGGTGATGGGCAAGGCGGGTAGAGAATGT
GGCCAACGTCGGCAATGTTGGGGTAACATCGGAGGCGATGCTGAGGCCGT
CGCTGGAGGGCATTGGTCGTTGTGGCTTCGTAGCGCGGTGGAGATATCAG
AAGAAGGAATATTCCGCACTATCGTGAGCTTCGTTTGAACCTTTACACAT
AGCTGCTGGTCACGGAGACGACACCCTGTTACGGGTGCTGCTCGAAGAAG
GCGCAAATAAGGATGCCGTTACAACCGATGGATTTTCCGCTCTCCATTGT
GCTGCGGCCAAAGGTGCATTGCCCTGTGTCGCTCTCCTACTTGAGATCGG
CGTAGACGCTAATTTGAAAAGCGGTGGACCGGAGAGTCGCACTCCTCTGC
ACGCCGCTGCGGTGCGTGGAGACCCGGATATAGTTGGAGAGCTCCTACGA
TGCGGTGCCCAGGTGGATGTTACCGATTCGGACTTAACCACGGCCCTCCA
CATCGCTGCTGCGAATGGCAATCTTGAGGTGGCGCGGTGCGTGATAGAAG
CCGGCGCAAATGTAAACGTGACGAATGTGGAAGGGGACACCCCTCTGCAC
CTAGCCTGCATGATGCTCAACCATCGTGTGGCAAAGCTTCTGCTTTCACG
GGAGGCCGATGAAACGGCCGTGAACAAGTACAACAGCACCCCTGCCGACG
TGTTGAAGGGTTACCTAATGGAGGATGGACGGGGGCACGGCAACCCTACT
CTGGTGAATATGATTTCTTGGATGTTGGCGAGGGCTCCCGCCGATAGGGC
TTGGCGTCGTAAGAGCGGGATTGTGATGATGCGGGGTCAGTTCACTAGGC
AATGGGCAGCGGGCAAAGGTGGGGACGACGAGCGGGTGACGGAAACGGGT
GACGCATTGTCATCGGTGATGGGCAAGGCGGGTAGAGAATGTGGCCAACG
TCGGCAATGTTGGGGTAACATCGGAGGCGATGCTGAGGCCGTCGCTGGAG
GGCATTGGTCGTTGTGGCTTCGTAGCGCGGTGGAGATATCAGAAGAAGGA
ATATTCCGCACTATCGTGAGCTTCGTTTGA
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