mRNA_H-paniculata_contig33037.8866.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: UPI001C093D0F (LOW QUALITY PROTEIN: secreted RxLR effector protein 161-like n=1 Tax=Alosa sapidissima TaxID=34773 RepID=UPI001C093D0F) HSP 1 Score: 179 bits (454), Expect = 6.120e-53 Identity = 92/210 (43.81%), Postives = 136/210 (64.76%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLRSL 630
GSL+Y ST TRPDIA+AV A P ++ ++ KRI RYL+ LG+ + K+ G+ D DWA D++DRKS +GY+FK++G A+SW S+KQS V ++ EAEY+A A +E V++R+LL + G+T +EDN+SAI +++ R KHI ++ H IR+ V G + LK KTD +AD+LTKGL++V+F +LR +
Sbjct: 32 GSLLYLSTRTRPDIAFAVSNVASFCSDPTKQHWTAVKRILRYLNGTQPLGLLYS-KNTEKECIGYSDADWAGDLDDRKSVSGYMFKMSGAAVSWKSKKQSXVLLSTAEAEYMALASAAQEAVWMRQLLSDLKNCPAGATVIYEDNQSAICMARNPQFHGRAKHIDIKHHFIRDQVASGAVDLKDCKTDDMIADMLTKGLTQVKFIKLREM 240
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: H3GB69_PHYRM (Reverse transcriptase Ty1/copia-type domain-containing protein n=1 Tax=Phytophthora ramorum TaxID=164328 RepID=H3GB69_PHYRM) HSP 1 Score: 179 bits (454), Expect = 3.850e-52 Identity = 94/201 (46.77%), Postives = 129/201 (64.18%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSR 603
G+L+Y +T TRPDIA AV + A+ E + + KRI +YL T DLG+ F G + G L G+ D +WA D++ R+STTGYVF LNG AISW S++Q V +STEAEY+A A +E V+LR+LL + C G+TT F+DN+ I L+K RTKHI +++H +RE V V+ L+Y TD +AD TK L+R
Sbjct: 99 GALMYLATCTRPDIAQAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDLGLVFNGGTKGE-LIGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNATQEAVWLRQLLLDVGCECVGATTFFQDNQGCIALAKNPAYHSRTKHIDLKYHFLREKVEDKVIVLEYKPTDEMIADGFTKALAR 298
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A1Y1N3K4_PHOPY (Uncharacterized protein n=2 Tax=Photinus pyralis TaxID=7054 RepID=A0A1Y1N3K4_PHOPY) HSP 1 Score: 176 bits (447), Expect = 8.290e-52 Identity = 99/211 (46.92%), Postives = 133/211 (63.03%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGI--TFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLRS 627
GSL++A+ RPDIA+AV+ +R ++ KRI RYL DLGI TF + + GF D D+A DV+ RKSTTGYVF + GAI+WCSR+Q ++TEAEYVAA EA KE ++LR LL IS + + DN+SAI L K RTKHI VR+H I+E + G + ++YV+++ QLADILTK L V+F +LR+
Sbjct: 42 GSLMFAAITARPDIAFAVNVVSRFQNNQGAPHWNAVKRIMRYLKHTKDLGIRYTFSDEP----VHGFSDSDYASDVDTRKSTTGYVFNMANGAITWCSRRQQTTSVSTTEAEYVAAAEATKEAIWLRHLLSEISGKSIENVQLYVDNQSAIKLVKNPIFHKRTKHIDVRYHFIKEKFQNGDIKIEYVRSEDQLADILTKPLVSVKFNKLRT 248
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A2P4XPH2_9STRA (RxLR effector candidate protein (Fragment) n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4XPH2_9STRA) HSP 1 Score: 176 bits (445), Expect = 1.130e-51 Identity = 90/201 (44.78%), Postives = 129/201 (64.18%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSR 603
G+L+Y +T TRP+IAYAV + A+ E + + KRI +YL T D+G+ F G G L G+ D +WA D++ R+STTGYVF LNG AISW S++Q V +STEAEY+A A +E V+LR+LL + + +G+TT ++DN+ I L+K RTKHI +++H +RE V + L+Y TD +AD TK L+R
Sbjct: 27 GALMYLATSTRPNIAYAVGEVAKFCERYNKSHWVAAKRILKYLKTTQDVGLVFNGGIKGE-LVGYADANWAGDLDTRRSTTGYVFFLNGSAISWKSKRQPTVATSSTEAEYMALYNAIQEAVWLRQLLKDLGYENKGATTIYQDNQGCIALAKNPAYHTRTKHIDIKFHFLREKVESKTVELEYKPTDEMIADGFTKALAR 226
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A1M2V968_TRAPU (Copia protein n=1 Tax=Trametes pubescens TaxID=154538 RepID=A0A1M2V968_TRAPU) HSP 1 Score: 176 bits (446), Expect = 1.610e-51 Identity = 92/216 (42.59%), Postives = 129/216 (59.72%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHG--------LEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLR 624
G+L+YA+ GTRPDI+YAV ++ P ++ KR+FRYL D G+T+G K H LEG+ D DW + DRKS +GY F + G I+W S+KQ++V +STEAEY+A A + +++R LL ++F +T DN+SAI LSK S R+KHI +R H IRE + +AL YV TD +AD+ TK L+R +F LR
Sbjct: 29 GTLMYAALGTRPDISYAVQALSQFSSRPGPAHWTAVKRVFRYLKGTLDYGMTYGRKGETHARAYYRNLRLEGYSDADWGANPVDRKSISGYAFLIGSGVIAWSSKKQAVVALSSTEAEYMAISYAARHAIWMRTLLAELTFAQEQATKLNADNQSAIALSKDSVHHARSKHIDIRHHFIRECIESDTIALAYVPTDDNVADLFTKALARERFHMLR 244
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A182G509_AEDAL (Uncharacterized protein n=2 Tax=Aedes albopictus TaxID=7160 RepID=A0A182G509_AEDAL) HSP 1 Score: 174 bits (442), Expect = 3.510e-51 Identity = 87/208 (41.83%), Postives = 131/208 (62.98%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLR 624
GSL++ +GTRPDI +A+ AR E P +E + KR+ RYLS D+G+ F + + L +VD DWA D+ DRKSTTG+ K+ G + WCSRKQ++V +S EAEYVA +A KE ++L +++ ++ + T EDN I++S+ + R+KH VR+H +RE VR+ +L LK + ++ Q+AD LTK L +V F + R
Sbjct: 18 GSLMFLMSGTRPDICFALTYLARFQENPTQEHWQCLKRVLRYLSGTIDVGLQFSKRDDEPALSCYVDADWANDLVDRKSTTGFFIKVYGNVVQWCSRKQAIVALSSCEAEYVAVCDAAKEVLWLLKVMNDLNLQVQLPVTMLEDNSGCISVSENPETR-RSKHYDVRYHFLREKVREKILKLKRIPSESQVADTLTKALGKVLFVQHR 224
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A7D9KES8_PARCT (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9KES8_PARCT) HSP 1 Score: 184 bits (467), Expect = 6.920e-51 Identity = 95/211 (45.02%), Postives = 131/211 (62.09%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLRSLL 633
G L+Y ST TRPDIAYAV AR P E + KRI RYL+ D+G+ + G G+ D DWA D++DRKST+GYVF+++ AISW S+KQS V ++ EAEY+A A +E V+L++LL + G EDN++AI ++K + R KHI +++H IRE V + L+Y T+ +ADI TKGLS VQF +LR +L
Sbjct: 281 GHLLYLSTKTRPDIAYAVSDVARFSADPTEEHWIAVKRIMRYLNGTRDMGLLYDGSKTTTSCVGYSDADWAGDLDDRKSTSGYVFQISNAAISWRSKKQSCVALSTAEAEYMALASATQEAVWLQQLLSDLKSKPTGPMLILEDNQAAICMAKNAQYHGRAKHIDIKYHFIREHVASAAVKLEYCSTEEMIADIFTKGLSVVQFTKLRKML 491
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A7D9D5L2_PARCT (Uncharacterized protein n=1 Tax=Paramuricea clavata TaxID=317549 RepID=A0A7D9D5L2_PARCT) HSP 1 Score: 175 bits (444), Expect = 1.090e-50 Identity = 92/211 (43.60%), Postives = 126/211 (59.72%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLRSLL 633
G L Y +T TRPD+A AV ++ M P +E + KR+ RY+ + G+ F GKS L G+ D DWA D++ R+ST+GYVF++NG +SWCS++Q V ++TEAEYVA A +E V+LR LL I + EDN+ AI LSK RTKHI V +H +RE V + + Y TD LAD++TK L R FQ+ R +L
Sbjct: 91 GCLTYVTTATRPDLASAVGILSKFMSKPSKEHWHGAKRVLRYIKDTVNYGLVFEGKSTKCSLIGYSDADWANDLDTRRSTSGYVFQINGSTVSWCSKRQPCVTRSTTEAEYVALSHATQEIVWLRRLLNDIGEKQDQPSIMNEDNQGAIELSKNPRFHNRTKHIDVAYHFVREKVGDKSINVNYCSTDKMLADVMTKSLPRQTFQKFRDML 301
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A498M2F0_LABRO (Retrovirus-related Pol poly from transposon TNT 1-94 n=1 Tax=Labeo rohita TaxID=84645 RepID=A0A498M2F0_LABRO) HSP 1 Score: 184 bits (467), Expect = 1.170e-50 Identity = 94/210 (44.76%), Postives = 135/210 (64.29%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGLEGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLRSL 630
GSL+Y ST TRPDIAYAV+ AR P ++ ++ KRI RYL +LG+ + K GF D DWA D DRKS +GY+F+++G A+SW S+KQ+ V ++ EAEY+A A +E V++R+L+ + G T FEDN+SAI ++K S R KHI +++H IRE + GV+ L+Y TD +AD+ TKGLS+ +F +LR +
Sbjct: 535 GSLLYLSTRTRPDIAYAVNNVARFCAKPTKQHWTAVKRIMRYLKGTLNLGLLYN-KDKPKECIGFSDADWAGDQNDRKSMSGYMFQISGAAVSWRSKKQTCVALSTAEAEYMALASAAQEAVWMRQLMTDLKVNQAGPTVMFEDNQSAICMAKNSQFHGRAKHIDIKYHFIREKIAGGVIDLQYCNTDDMVADMFTKGLSQEKFVKLREM 743
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Match: A0A7M6DPI8_9CNID (Uncharacterized protein n=1 Tax=Clytia hemisphaerica TaxID=252671 RepID=A0A7M6DPI8_9CNID) HSP 1 Score: 186 bits (471), Expect = 1.350e-50 Identity = 95/209 (45.45%), Postives = 132/209 (63.16%), Query Frame = 1
Query: 1 GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGITFGGKSNGHGL-EGFVDVDWAEDVEDRKSTTGYVFKLNGGAISWCSRKQSLVPWASTEAEYVAAVEAGKETVYLRELLGSISFGCRGSTTSFEDNKSAINLSKGSGAQCRTKHIGVRWHGIREWVRKGVLALKYVKTDGQLADILTKGLSRVQFQRLR 624
G L YAS GTRPDI+ AV ++ M P ++ + KR+ RYL D G+ + G +G L GF D DWA D++ RKST+GYVFK+ +SW S++QS+V + TEAEYVA +A +E ++LR L + F T FEDN+ AI L+K RTKHI +++H +R+ V K V+ L+Y TD +AD+LTKGL R QF++LR
Sbjct: 1079 GCLTYASIGTRPDISAAVGVLSQHMSKPGKQHWIGVKRVLRYLKGTLDYGLIYEGSESGDILLHGFADADWAGDIDTRKSTSGYVFKVGNSTVSWKSKRQSIVALSKTEAEYVALSQATQEVIWLRTLFKGMDFEQTDPTKMFEDNQGAIELAKNQPNHSRTKHIDIKFHHVRDAVAKKVIDLEYCPTDEMIADLLTKGLPRPQFEKLR 1287 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33037.8866.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33037.8866.1 >prot_H-paniculata_contig33037.8866.1 ID=prot_H-paniculata_contig33037.8866.1|Name=mRNA_H-paniculata_contig33037.8866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=213bp GSLVYASTGTRPDIAYAVHQAARRMEGPCREDFSICKRIFRYLSTVSDLGback to top mRNA from alignment at H-paniculata_contig33037:2..640+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33037.8866.1 ID=mRNA_H-paniculata_contig33037.8866.1|Name=mRNA_H-paniculata_contig33037.8866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=639bp|location=Sequence derived from alignment at H-paniculata_contig33037:2..640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33037:2..640+ >mRNA_H-paniculata_contig33037.8866.1 ID=mRNA_H-paniculata_contig33037.8866.1|Name=mRNA_H-paniculata_contig33037.8866.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig33037:2..640+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |