mRNA_H-paniculata_contig33034.8865.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A6H5JL55_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JL55_9PHAE) HSP 1 Score: 144 bits (362), Expect = 3.420e-37 Identity = 65/102 (63.73%), Postives = 85/102 (83.33%), Query Frame = 1
Query: 1 DQEVKDLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRK-EPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRL 303
D+EVK+LIQ +K M G+S+DDPPD++W+ +EKT+++TG+K PMG+CLIGIQ+YP +A+ Q G GR EPN+SPFLPPP+GRL F WNP SM+ QLLGPRL
Sbjct: 2039 DEEVKELIQKLKVMAGISNDDPPDSQWISLEKTDRKTGKKVTPMGKCLIGIQIYPLDKAEAQPAGLGRAEPNDSPFLPPPNGRLQFGWNPISMISQLLGPRL 2140
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: D8LF87_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF87_ECTSI) HSP 1 Score: 129 bits (323), Expect = 6.140e-32 Identity = 60/126 (47.62%), Postives = 91/126 (72.22%), Query Frame = 1
Query: 7 EVKDLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLL 384
+ K + +K+MTGL DDP ++ W+ ME+TN TG+KE MG+CL+G+Q++P ++A++Q G GR +PN+ PFLPPP+GRL F+ NPF M +L GP++C +AC+ C V+ I +L+ F +NLL
Sbjct: 2095 DAKAFVNTIKNMTGLWDDDPDESYWLNMERTNYETGQKEQMGKCLMGVQIWPIEKAELQPVGNGRNDPNSQPFLPPPAGRLRFSLNPFVMGSELFGPKICAKIACVCCCVISILLLVYFSGFFNLL 2220
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A067CD61_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067CD61_SAPPC) HSP 1 Score: 120 bits (302), Expect = 4.100e-29 Identity = 58/125 (46.40%), Postives = 87/125 (69.60%), Query Frame = 1
Query: 16 DLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIV 390
D I+ +K+ TGL DP D+ W+KME+ N+ TG+KE MG I ++L P +A++Q G GR +PNNSPFLPPP+GRL F+ NPF + +LLGP++C + C +C +L++ ++ P+ NL+IV
Sbjct: 1633 DAIRSIKEATGLWDTDPTDSTWIKMERLNRETGQKEAMGALCISMELVPIDKAKVQTVGFGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPKICHRVMCCLCCILIMVLMYFLGPIINLIIV 1757
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A418BA36_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A418BA36_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.430e-29 Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 4 QEVKDLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIV 390
Q D I+ +K+ TGL DP D+ W+KME+ N+ T KEPMG I ++L P +A++Q G GR +PNN PFLPPP+GRL F+ NPF + +LLGP++C C +C+V+V+A + P NL+IV
Sbjct: 973 QRDNDAIRSIKEATGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPIDKAKIQTVGFGRSDPNNGPFLPPPAGRLKFSMNPFYVFNELLGPKICRKFMCCLCIVIVMAAMYFLGPFMNLIIV 1101
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A024UTA9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UTA9_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.630e-29 Identity = 60/129 (46.51%), Postives = 85/129 (65.89%), Query Frame = 1
Query: 4 QEVKDLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIV 390
Q D I+ +K+ TGL DP D+ W+KME+ N+ T KEPMG I ++L P +A++Q G GR +PNN PFLPPP+GRL F+ NPF + +LLGP++C C +C+V+V+A + P NL+IV
Sbjct: 1647 QRDNDAIRSIKEATGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPIDKAKIQTVGFGRSDPNNGPFLPPPAGRLKFSMNPFYVFNELLGPKICRKFMCCLCIVIVMAAMYFLGPFMNLIIV 1775
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A1V9ZTL2_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZTL2_9STRA) HSP 1 Score: 120 bits (300), Expect = 7.800e-29 Identity = 57/125 (45.60%), Postives = 88/125 (70.40%), Query Frame = 1
Query: 16 DLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIV 390
D I+ +K+ TGL +DP D+ W+KME+ N+ TG+KE MG I ++L P ++A++ G GR +PNNSPFLPPP+GRL F+ NPF + +LLGP++C + C +C +L++ ++ P+ NL+IV
Sbjct: 3427 DAIRSIKEATGLWDNDPTDSTWIKMERLNRETGQKEAMGAVCISMELVPVEKAKVMTVGFGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPKICHRVMCCLCXLLIMVLMYFLGPIINLIIV 3551
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A067CD42_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067CD42_SAPPC) HSP 1 Score: 119 bits (299), Expect = 9.880e-29 Identity = 61/126 (48.41%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 16 DLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIVI 393
D I+ +K+ TGL DP D+ W+KME+ N+ TG K+PMG I ++L P ++A+ A G GR +PNNSPFLPPP+GRL F+ NPF + +LLGP++C + C+VC V + ++ P+ NLLIVI
Sbjct: 714 DAIRSIKEATGLFDTDPTDSSWIKMERMNRETGVKDPMGAVCISMELVPIEKAKTIAVGYGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPKICRRVMCVVCFVAIGVIMYFAGPIINLLIVI 839
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A6A5AKT2_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AKT2_9STRA) HSP 1 Score: 118 bits (296), Expect = 1.620e-28 Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 22 IQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIV 390
I+ +K+ TGL DP D+ W+KME+ N+ T KEPMG I ++L P ++A++QA G GR +PNN+PFLPPP+GRL F+ NPF + +LLGP +C + C +C+V ++A + P NLLIV
Sbjct: 436 IRSIKESTGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPVEKAKIQAVGFGRSDPNNTPFLPPPAGRLKFSMNPFYVFNELLGPAICRKVMCCLCLVAIMAAMYFLGPFMNLLIV 558
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: A0A1V9ZRT1_9STRA (Uncharacterized protein n=1 Tax=Achlya hypogyna TaxID=1202772 RepID=A0A1V9ZRT1_9STRA) HSP 1 Score: 119 bits (297), Expect = 1.940e-28 Identity = 61/126 (48.41%), Postives = 87/126 (69.05%), Query Frame = 1
Query: 16 DLIQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIVI 393
D I+ +K+ TGL DP D+ W+KME+ N+ TG KEPMG I ++L P ++A++ G GR +PNNSPFLPPP+GRL F+ NPF + +LLGPR+C + C++C V + ++ P+ NLLIVI
Sbjct: 1665 DAIRSIKEATGLWDTDPTDSTWIKMERFNRDTGVKEPMGAVCISMELVPVEKARVMTVGFGRSDPNNSPFLPPPAGRLKFSMNPFYVFNELLGPRICRRVMCVLCFVALGVIMYFAGPIINLLIVI 1790
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Match: W4GKQ4_9STRA (Uncharacterized protein n=9 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GKQ4_9STRA) HSP 1 Score: 118 bits (296), Expect = 2.640e-28 Identity = 59/123 (47.97%), Postives = 85/123 (69.11%), Query Frame = 1
Query: 22 IQYMKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMQAGGTGRLEPNNSPFLPPPSGRLSFTWNPFSMLYQLLGPRLCTILACLVCVVLVIAMLILFQPVWNLLIV 390
I+ +K+ TGL DP D+ W+KME+ N+ T KEPMG I ++L P ++A++QA G GR +PNN+PFLPPP+GRL F+ NPF + +LLGP +C + C +C+V ++A + P NLLIV
Sbjct: 1670 IRSIKESTGLWDTDPTDSTWIKMERLNRETNVKEPMGAVCISMELVPVEKAKIQAVGFGRSDPNNTPFLPPPAGRLKFSMNPFYVFNELLGPAICRKVMCCLCLVAIMAAMYFLGPFMNLLIV 1792 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig33034.8865.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig33034.8865.1 >prot_H-paniculata_contig33034.8865.1 ID=prot_H-paniculata_contig33034.8865.1|Name=mRNA_H-paniculata_contig33034.8865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=125bp MKDMTGLSSDDPPDTKWVKMEKTNKRTGRKEPMGQCLIGIQLYPAKRAQMback to top mRNA from alignment at H-paniculata_contig33034:806..2028+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig33034.8865.1 ID=mRNA_H-paniculata_contig33034.8865.1|Name=mRNA_H-paniculata_contig33034.8865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1223bp|location=Sequence derived from alignment at H-paniculata_contig33034:806..2028+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig33034:806..2028+ >mRNA_H-paniculata_contig33034.8865.1 ID=mRNA_H-paniculata_contig33034.8865.1|Name=mRNA_H-paniculata_contig33034.8865.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=750bp|location=Sequence derived from alignment at H-paniculata_contig33034:806..2028+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |