mRNA_H-paniculata_contig3303.8864.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI) HSP 1 Score: 327 bits (837), Expect = 1.140e-109 Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRARPRVDA 778
TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAI ADISVQFDMHKITKVAFRLQPCSGLTCDG+ EGI+WIVDEAKKRARPRVDA
Sbjct: 32 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRVDA 194
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA) HSP 1 Score: 226 bits (577), Expect = 1.570e-69 Identity = 98/158 (62.03%), Postives = 131/158 (82.91%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
TLLEQMKG+F K QGIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA+AHG++FV+DSADVGR EEA++AFD V+E EL G+P+++LANKQDLP A+ + DI++ F++H + RLQP S LTC+GI +G+ W+V+E++ R
Sbjct: 91 TLLEQMKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA) HSP 1 Score: 216 bits (550), Expect = 3.000e-66 Identity = 98/158 (62.03%), Postives = 127/158 (80.38%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
TLLEQMKGIFKKV GIPP+KIPPT+GLNV KMD+GG +TFWD+GGQVR+R+LWE+YYADAH LI VMDSAD RFEEA++AF V+EQ ELH +PL++LANKQD+ A DI+ QFD HK+ V FR+ S L+ +G+ EGI+W++ +A+++ +
Sbjct: 32 TLLEQMKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKAREKTQ 189
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA) HSP 1 Score: 202 bits (514), Expect = 8.150e-61 Identity = 91/159 (57.23%), Postives = 124/159 (77.99%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKV-AFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
TLLEQ KGIF+KVQGIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ + +L VP+++ ANKQDLP A+ D++ F++ ++ + ++ CS LTC+G+ G+ W+V EAK AR
Sbjct: 32 TLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA) HSP 1 Score: 204 bits (519), Expect = 4.120e-55 Identity = 92/159 (57.86%), Postives = 124/159 (77.99%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKV-AFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
TLLEQ KGIF+KVQGIPP KI PTVGLNVGKMD+ GC + WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ + +L VP+++ ANKQDLP A+ D++ F + ++ + ++ PCS LTC+G+ G+ W+V EAK AR
Sbjct: 1038 TLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT) HSP 1 Score: 168 bits (425), Expect = 2.020e-47 Identity = 77/160 (48.12%), Postives = 114/160 (71.25%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVA--FRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
T LEQMKG+F+K++ + P KIPPTVGLN+G+M+VG KL FWDLGGQ +R +WEKY+A+ HGL++V+D+AD RF+E+R F+ + + +L GVP+++LANKQDL A + +I +F + + +R++P S +T GI +GI W+VD K +R
Sbjct: 32 TALEQMKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA) HSP 1 Score: 166 bits (420), Expect = 2.600e-46 Identity = 87/180 (48.33%), Postives = 115/180 (63.89%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQF-----DMHKITKVAF---------------------RLQPCSGLTCDGITEGINWIVDEA 748
TLLEQMKGIF+K IP KIPPTVGLN+G+MD+ C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD+ RFEEA+ A +++ EL GVPL++ ANKQDL + +I+ F + KI A +LQP S LTC GI +GI W+V+ A
Sbjct: 32 TLLEQMKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE) HSP 1 Score: 160 bits (405), Expect = 2.240e-44 Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
TLLE++K F ++G+PP +I PTVGLN+G+++V KL FWDLGGQ +RS+WEKYY +AH ++FV+D+A RFE+A+ A + V +LHG PL++LANKQDL EA ++ D+ K+ + +++Q S GI E +NW+VD ++ R
Sbjct: 32 TLLEKLKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKR 189
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A251VRT7_HELAN (Putative GTP-binding protein 1 n=6 Tax=Asteraceae TaxID=4210 RepID=A0A251VRT7_HELAN) HSP 1 Score: 157 bits (397), Expect = 3.800e-43 Identity = 70/158 (44.30%), Postives = 108/158 (68.35%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
TLLE++K + V+G+PP +I PTVGLN+G+++ KL FWDLGGQ +RS+WEKYY +AH +IFV+D++ RFE+++ A + V +LHG PL++LANKQDL +A+ +++ D+ K+ + A+ + SG GI E +NW+VD ++ R
Sbjct: 32 TLLEKLKAQYSSVEGLPPDRIVPTVGLNIGRIETSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVIFVVDASCPSRFEDSKSALEKVLRHEDLHGAPLLVLANKQDLGDAVSAEELARYLDLKKLDERAYTFEGVSGYDGTGIKEIVNWLVDVMERSKR 189
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A199VFM9_ANACO (ADP-ribosylation factor-related protein 1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199VFM9_ANACO) HSP 1 Score: 155 bits (393), Expect = 1.410e-42 Identity = 68/161 (42.24%), Postives = 108/161 (67.08%), Query Frame = 2
Query: 290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRARPRV 772
TLLE++K I+ K++G+PP +I PTVGLN+G+++ KL FWDLGGQV +R++WEKYY +AH +I+V+D++ FE+A+ A + V +L G PL++LANKQDLP +I D++ D+ ++ + + Q S GI GI+W+V+ ++ R +
Sbjct: 32 TLLEKLKSIYSKMEGLPPDRIVPTVGLNIGRIEAANAKLVFWDLGGQVGLRTIWEKYYEEAHAIIYVIDASSPSSFEDAKSALEKVLRHEDLRGAPLLILANKQDLPGSISAEDVARYLDLKELDERLYMFQAVSSYDGTGIKFGIDWLVEVMERSKRTEI 192 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3303.8864.1 >prot_H-paniculata_contig3303.8864.1 ID=prot_H-paniculata_contig3303.8864.1|Name=mRNA_H-paniculata_contig3303.8864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp MKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEback to top mRNA from alignment at H-paniculata_contig3303:14632..17291- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3303.8864.1 ID=mRNA_H-paniculata_contig3303.8864.1|Name=mRNA_H-paniculata_contig3303.8864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2660bp|location=Sequence derived from alignment at H-paniculata_contig3303:14632..17291- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3303:14632..17291- >mRNA_H-paniculata_contig3303.8864.1 ID=mRNA_H-paniculata_contig3303.8864.1|Name=mRNA_H-paniculata_contig3303.8864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig3303:14632..17291- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |