mRNA_H-paniculata_contig3303.8864.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3303.8864.1
Unique NamemRNA_H-paniculata_contig3303.8864.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: D8LPQ2_ECTSI (ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LPQ2_ECTSI)

HSP 1 Score: 327 bits (837), Expect = 1.140e-109
Identity = 158/163 (96.93%), Postives = 160/163 (98.16%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRARPRVDA 778
            TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAI  ADISVQFDMHKITKVAFRLQPCSGLTCDG+ EGI+WIVDEAKKRARPRVDA
Sbjct:   32 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAISTADISVQFDMHKITKVAFRLQPCSGLTCDGVAEGIHWIVDEAKKRARPRVDA 194          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A7S2BA16_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2BA16_9STRA)

HSP 1 Score: 226 bits (577), Expect = 1.570e-69
Identity = 98/158 (62.03%), Postives = 131/158 (82.91%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            TLLEQMKG+F K QGIPP +IPPT+GLN+GKMDVG C++ FWDLGGQVR+RS+WEKYYA+AHG++FV+DSADVGR EEA++AFD V+E  EL G+P+++LANKQDLP A+ + DI++ F++H +     RLQP S LTC+GI +G+ W+V+E++   R
Sbjct:   91 TLLEQMKGLFNKQQGIPPERIPPTIGLNIGKMDVGTCRVIFWDLGGQVRMRSIWEKYYAEAHGMVFVIDSADVGRMEEAKLAFDAVREHEELRGIPVLLLANKQDLPGAMAIEDIAMHFEIHNLPPRLVRLQPASCLTCEGIEDGVRWVVEESRTADR 248          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A835YY21_9STRA (ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YY21_9STRA)

HSP 1 Score: 216 bits (550), Expect = 3.000e-66
Identity = 98/158 (62.03%), Postives = 127/158 (80.38%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            TLLEQMKGIFKKV GIPP+KIPPT+GLNV KMD+GG  +TFWD+GGQVR+R+LWE+YYADAH LI VMDSAD  RFEEA++AF  V+EQ ELH +PL++LANKQD+  A    DI+ QFD HK+  V FR+   S L+ +G+ EGI+W++ +A+++ +
Sbjct:   32 TLLEQMKGIFKKVPGIPPAKIPPTIGLNVAKMDIGGVSVTFWDVGGQVRLRALWERYYADAHALICVMDSADAARFEEAQLAFHAVREQAELHALPLLLLANKQDVAGACSGGDIAAQFDAHKVMGVPFRVHAVSALSGEGVNEGISWLIAKAREKTQ 189          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: W7TPL1_9STRA (1-family small gtpase n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7TPL1_9STRA)

HSP 1 Score: 202 bits (514), Expect = 8.150e-61
Identity = 91/159 (57.23%), Postives = 124/159 (77.99%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKV-AFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            TLLEQ KGIF+KVQGIPP KI PTVGLNVGKMD+ GC +  WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ +  +L  VP+++ ANKQDLP A+   D++  F++ ++ +    ++  CS LTC+G+  G+ W+V EAK  AR
Sbjct:   32 TLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFEIDRVLRHRVIQVHSCSALTCEGLESGVRWLVQEAKGLAR 190          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A4D9CTS6_9STRA (Uncharacterized protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CTS6_9STRA)

HSP 1 Score: 204 bits (519), Expect = 4.120e-55
Identity = 92/159 (57.86%), Postives = 124/159 (77.99%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKV-AFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            TLLEQ KGIF+KVQGIPP KI PTVGLNVGKMD+ GC +  WDLGGQVR+RS+W+KYYADAHG++FV+D+ADVGRFEEA++AF ++ +  +L  VP+++ ANKQDLP A+   D++  F + ++ +    ++ PCS LTC+G+  G+ W+V EAK  AR
Sbjct: 1038 TLLEQSKGIFRKVQGIPPEKITPTVGLNVGKMDIEGCFVILWDLGGQVRMRSIWDKYYADAHGVVFVLDAADVGRFEEAKLAFASILDHEDLGDVPVLLFANKQDLPGALSEEDVAESFKIDRVLRHRVIQVHPCSALTCEGLESGVRWLVQEAKGLAR 1196          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A8J6CF14_DIALT (Uncharacterized protein n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6CF14_DIALT)

HSP 1 Score: 168 bits (425), Expect = 2.020e-47
Identity = 77/160 (48.12%), Postives = 114/160 (71.25%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVA--FRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            T LEQMKG+F+K++ + P KIPPTVGLN+G+M+VG  KL FWDLGGQ  +R +WEKY+A+ HGL++V+D+AD  RF+E+R  F+ + +  +L GVP+++LANKQDL  A  + +I  +F    +   +  +R++P S +T  GI +GI W+VD  K  +R
Sbjct:   32 TALEQMKGLFQKIEPLAPEKIPPTVGLNIGRMEVGRVKLIFWDLGGQSGLRGIWEKYFAEVHGLVYVIDAADDQRFDESRRIFEALVKHPDLAGVPVLILANKQDLHSAATIDEIDERFGFGSLCAPSQQYRIEPVSAITGSGIADGITWMVDMLKLSSR 191          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A7S2WHH1_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2WHH1_9STRA)

HSP 1 Score: 166 bits (420), Expect = 2.600e-46
Identity = 87/180 (48.33%), Postives = 115/180 (63.89%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQG-IPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQF-----DMHKITKVAF---------------------RLQPCSGLTCDGITEGINWIVDEA 748
            TLLEQMKGIF+K    IP  KIPPTVGLN+G+MD+  C++ FWDLGGQ+ +RS+W+KYY++AHGLIFV+DSAD+ RFEEA+ A +++    EL GVPL++ ANKQDL  +    +I+  F      + KI   A                      +LQP S LTC GI +GI W+V+ A
Sbjct:   32 TLLEQMKGIFQKAANQIPLDKIPPTVGLNIGRMDIDNCRVIFWDLGGQIALRSIWDKYYSEAHGLIFVLDSADIDRFEEAKAAMESIASHPELAGVPLLVCANKQDLATSRGYDEINEYFRVVSESLGKIGSNADSEQNSMNASEHILSLGKRRERKLQPVSALTCSGIEDGIRWLVNAA 211          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A484KDI7_9ASTE (Uncharacterized protein n=5 Tax=Convolvulaceae TaxID=4118 RepID=A0A484KDI7_9ASTE)

HSP 1 Score: 160 bits (405), Expect = 2.240e-44
Identity = 72/158 (45.57%), Postives = 107/158 (67.72%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            TLLE++K  F  ++G+PP +I PTVGLN+G+++V   KL FWDLGGQ  +RS+WEKYY +AH ++FV+D+A   RFE+A+ A + V    +LHG PL++LANKQDL EA    ++    D+ K+ +  +++Q  S     GI E +NW+VD  ++  R
Sbjct:   32 TLLEKLKSQFLNIEGLPPDRIVPTVGLNIGRVEVSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVLFVVDAACPSRFEDAKSALEKVLRHEDLHGAPLLILANKQDLAEAASAEELDRYLDLKKLGERVYKIQAVSAYEGIGIKESVNWLVDAMERSKR 189          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A251VRT7_HELAN (Putative GTP-binding protein 1 n=6 Tax=Asteraceae TaxID=4210 RepID=A0A251VRT7_HELAN)

HSP 1 Score: 157 bits (397), Expect = 3.800e-43
Identity = 70/158 (44.30%), Postives = 108/158 (68.35%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRAR 763
            TLLE++K  +  V+G+PP +I PTVGLN+G+++    KL FWDLGGQ  +RS+WEKYY +AH +IFV+D++   RFE+++ A + V    +LHG PL++LANKQDL +A+   +++   D+ K+ + A+  +  SG    GI E +NW+VD  ++  R
Sbjct:   32 TLLEKLKAQYSSVEGLPPDRIVPTVGLNIGRIETSNSKLVFWDLGGQPGLRSIWEKYYEEAHAVIFVVDASCPSRFEDSKSALEKVLRHEDLHGAPLLVLANKQDLGDAVSAEELARYLDLKKLDERAYTFEGVSGYDGTGIKEIVNWLVDVMERSKR 189          
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Match: A0A199VFM9_ANACO (ADP-ribosylation factor-related protein 1 n=2 Tax=Ananas comosus TaxID=4615 RepID=A0A199VFM9_ANACO)

HSP 1 Score: 155 bits (393), Expect = 1.410e-42
Identity = 68/161 (42.24%), Postives = 108/161 (67.08%), Query Frame = 2
Query:  290 TLLEQMKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWEKYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQDLPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKKRARPRV 772
            TLLE++K I+ K++G+PP +I PTVGLN+G+++    KL FWDLGGQV +R++WEKYY +AH +I+V+D++    FE+A+ A + V    +L G PL++LANKQDLP +I   D++   D+ ++ +  +  Q  S     GI  GI+W+V+  ++  R  +
Sbjct:   32 TLLEKLKSIYSKMEGLPPDRIVPTVGLNIGRIEAANAKLVFWDLGGQVGLRTIWEKYYEEAHAIIYVIDASSPSSFEDAKSALEKVLRHEDLRGAPLLILANKQDLPGSISAEDVARYLDLKELDERLYMFQAVSSYDGTGIKFGIDWLVEVMERSKRTEI 192          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3303.8864.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D8LPQ2_ECTSI1.140e-10996.93ARFRP1, ARF-like Ras superfamily GTPase n=2 Tax=Ec... [more]
A0A7S2BA16_9STRA1.570e-6962.03Hypothetical protein n=1 Tax=Florenciella parvula ... [more]
A0A835YY21_9STRA3.000e-6662.03ARFRP1, ARF-like ras superfamily GTPase n=1 Tax=Tr... [more]
W7TPL1_9STRA8.150e-6157.231-family small gtpase n=1 Tax=Nannochloropsis gadi... [more]
A0A4D9CTS6_9STRA4.120e-5557.86Uncharacterized protein n=1 Tax=Nannochloropsis sa... [more]
A0A8J6CF14_DIALT2.020e-4748.13Uncharacterized protein n=1 Tax=Diacronema lutheri... [more]
A0A7S2WHH1_9STRA2.600e-4648.33Hypothetical protein n=1 Tax=labyrinthulid quahog ... [more]
A0A484KDI7_9ASTE2.240e-4445.57Uncharacterized protein n=5 Tax=Convolvulaceae Tax... [more]
A0A251VRT7_HELAN3.800e-4344.30Putative GTP-binding protein 1 n=6 Tax=Asteraceae ... [more]
A0A199VFM9_ANACO1.410e-4242.24ADP-ribosylation factor-related protein 1 n=2 Tax=... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3303contigH-paniculata_contig3303:14632..17291 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score321.6
Seed ortholog evalue2e-85
Seed eggNOG ortholog2880.D8LPQ2
Preferred nameARFRP1
KEGG koko:K07952
Hectar predicted targeting categoryother localisation
GOsGO:0000139,GO:0003674,GO:0003824,GO:0003924,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005794,GO:0005802,GO:0005829,GO:0006810,GO:0006886,GO:0006892,GO:0006893,GO:0006950,GO:0007154,GO:0007165,GO:0007275,GO:0007369,GO:0008104,GO:0008150,GO:0009653,GO:0009790,GO:0009987,GO:0012505,GO:0015031,GO:0015833,GO:0016020,GO:0016192,GO:0016197,GO:0016462,GO:0016482,GO:0016787,GO:0016817,GO:0016818,GO:0017111,GO:0023052,GO:0031090,GO:0031984,GO:0032501,GO:0032502,GO:0032588,GO:0033036,GO:0033365,GO:0033554,GO:0034067,GO:0034613,GO:0034976,GO:0042147,GO:0042175,GO:0042886,GO:0043001,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0044422,GO:0044424,GO:0044431,GO:0044444,GO:0044446,GO:0044464,GO:0045184,GO:0046907,GO:0048193,GO:0048598,GO:0048856,GO:0050789,GO:0050794,GO:0050896,GO:0051179,GO:0051234,GO:0051641,GO:0051649,GO:0051716,GO:0061951,GO:0065007,GO:0070727,GO:0071702,GO:0071705,GO:0072657,GO:0072659,GO:0090150,GO:0098588,GO:0098791,GO:0098876,GO:1990778
EggNOG free text desc.Golgi to plasma membrane protein transport
EggNOG OGsKOG0076@1,KOG0076@2759
Ec32 ortholog descriptionARFRP1, ARF-like Ras superfamily GTPase
Ec32 orthologEc-18_002040.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko04031,ko04131
Exons5
Model size1039
Cds size477
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930021.600222-UTR-H-paniculata_contig3303:14631..148891622930021.600222-UTR-H-paniculata_contig3303:14631..14889Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3303 14632..14889 -
1691481113.718098-UTR-H-paniculata_contig3303:14631..148891691481113.718098-UTR-H-paniculata_contig3303:14631..14889Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3303 14632..14889 -
1622930021.7266839-UTR-H-paniculata_contig3303:16987..172911622930021.7266839-UTR-H-paniculata_contig3303:16987..17291Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3303 16988..17291 -
1691481113.7780547-UTR-H-paniculata_contig3303:16987..172911691481113.7780547-UTR-H-paniculata_contig3303:16987..17291Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3303 16988..17291 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930021.6213663-CDS-H-paniculata_contig3303:14889..149651622930021.6213663-CDS-H-paniculata_contig3303:14889..14965Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 14890..14965 -
1691481113.731862-CDS-H-paniculata_contig3303:14889..149651691481113.731862-CDS-H-paniculata_contig3303:14889..14965Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 14890..14965 -
1622930021.6348834-CDS-H-paniculata_contig3303:15378..155441622930021.6348834-CDS-H-paniculata_contig3303:15378..15544Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 15379..15544 -
1691481113.7397337-CDS-H-paniculata_contig3303:15378..155441691481113.7397337-CDS-H-paniculata_contig3303:15378..15544Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 15379..15544 -
1622930021.6480901-CDS-H-paniculata_contig3303:15762..158711622930021.6480901-CDS-H-paniculata_contig3303:15762..15871Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 15763..15871 -
1691481113.751228-CDS-H-paniculata_contig3303:15762..158711691481113.751228-CDS-H-paniculata_contig3303:15762..15871Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 15763..15871 -
1622930021.6658897-CDS-H-paniculata_contig3303:16644..167001622930021.6658897-CDS-H-paniculata_contig3303:16644..16700Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 16645..16700 -
1691481113.760109-CDS-H-paniculata_contig3303:16644..167001691481113.760109-CDS-H-paniculata_contig3303:16644..16700Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 16645..16700 -
1622930021.6821084-CDS-H-paniculata_contig3303:16917..169871622930021.6821084-CDS-H-paniculata_contig3303:16917..16987Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 16918..16987 -
1691481113.7690082-CDS-H-paniculata_contig3303:16917..169871691481113.7690082-CDS-H-paniculata_contig3303:16917..16987Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3303 16918..16987 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3303.8864.1prot_H-paniculata_contig3303.8864.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3303 14890..16987 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3303.8864.1

>prot_H-paniculata_contig3303.8864.1 ID=prot_H-paniculata_contig3303.8864.1|Name=mRNA_H-paniculata_contig3303.8864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=159bp
MKGIFKKVQGIPPSKIPPTVGLNVGKMDVGGCKLTFWDLGGQVRVRSLWE
KYYADAHGLIFVMDSADVGRFEEARMAFDTVKEQGELHGVPLMMLANKQD
LPEAIPVADISVQFDMHKITKVAFRLQPCSGLTCDGITEGINWIVDEAKK
RARPRVDA*
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mRNA from alignment at H-paniculata_contig3303:14632..17291-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3303.8864.1 ID=mRNA_H-paniculata_contig3303.8864.1|Name=mRNA_H-paniculata_contig3303.8864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2660bp|location=Sequence derived from alignment at H-paniculata_contig3303:14632..17291- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTGTTTCTCATGTCAGCCCCGCGCACGGTCAGCGGTAGTGTTTCTTAACC ACGTTCTTCTGGACATTTGTGAGAAAATTCGTATTTCTTGATTGTTGGCG GGAAATGGGACGTTTTCTTACAGGGAAATTCTTGAGTAAAAAAAGCATAA GCCCAGTGTCCTTCCTGAGCAAGAACTTCTTTTGCGGGGGAACGAAGGCA AGACTCTTCAGATATGGAAGTCTGCAGCAACCAAGGCATTTGATTGCGAT TTTCCGTAAAACGTGATTCATGAATAATGTAACTGGCAGACGCTTCTGGA GCAGATGAAAGGTATTTTCAAGAAGGTCCAGGGGATACCTCCATCGAAGA TACCACCGACCGTGGGATTGAACGGTAGGTTTTTATATTGCGAACCACGT ACCCAAGTTGCCTGCAGGCCCGTCAACTAAAGCTGCCTACTCGAGATGAT GCGTCATGTCCAGCGTGCCCTTCCGGTTTTTGTGTTGCCCTGTGTCGGTC GCTGGAAGTGGACAATCATTCTGTTGTGCGATGAACCAACCGCATGTAAC TGGGATACGGTGATTGATCCTCTCTGCCTTGCTCGTGGCAGTTGGGAAGA TGGACGTGGGGGGCTGCAAGCTAACTTTCTGGGATTTAGGTGGGCAGGTG AGGTCTTCACCGCTATAGCCTGCGATAGCGGTTGCTCTCTTCCCCGCTCT GATGTCGCTGTTGGCGATGGAAGTTGTGAGGGACAGCGAATTCATAACGA GATGACGATGATGGAAGCTCGTGTCAAGACGGCTAATCGTTAACTGTATA TTGCAACGTTGAACAATCGTCAGCAAAATATCCTGCACGGCTGTTGGTGC TAAGAGAGATTGAAATATGATACTCGCGCCACCGAATGCAACAGTTGTAC CGGTCATGTTCGGAGTCTTCCTACGGTAGAGGGGGAGGGGTAGTTGAGCC ACTTTGAGAAGCATTTATTTTCATTTTTTTTACATTTATTCCCCCTCCTT GGACATGAATCCCATTTTAACTCGTAGACTGTGCACCTTAGGGATGCGCA AACCTATACAATTGACATGATTTTGATTCGCGTTATTTTTGCCCCGATTT CGCGAAGCGCCCTTCGTTAAAGAACTGATCATCCTTCCTACCGTAATAAC TCCATGTATTAGCGCTTTCATGCACAGGCTGTTTGATGGTGGTGTTGTAA CATCTCCCTAGATAGCACCCACTCCCTCCACGAGTGCATTGCCCGCTGGA TCTGCGTCATTTTCATTAAAGCTGGTGTCGTGGGCGCGTTGTCTTTTACA CGAATGTCTGTATGTTATTCGGGGCCCAGAGGAATAATGTTTACGGGTTA TTTGATCAACCGCATGCAGCATCGCTAGGGTCACAAAATTCCATTCGCTG CATGATGTGCTTTGTTCCAGGTACGAGTCAGGTCGCTGTGGGAGAAATAC TACGCTGACGCTCATGGGCTAATTTTTGTCATGGATTCAGCGGACGTGGG AAGATTTGAGGAGGCCAGGATGGCTTTCGGTGAGTAAACGCTGAGTGTTA TCTTCGCAAGTTTTTGAAAGTTGCGCAATATCTCTCCTACTCGTGTCAAC CGGCAGAGAGTAAAGGTTGGGCAATATGTTTAGTTCGTGTTCTTGCTTGA ATGCTTTGCTGTGGAGAGCGACTCGCCCTCACCATCTATCGTCTTGGTAA GGTCATCTTTCGGTTGCTCCTTTGCGTGCATTCGCTGCAACACGCAGACA CGGTTAAGGAGCAAGGGGAACTCCATGGGGTGCCGTTGATGATGCTTGCC AATAAGCAGGACTTGCCAGAGGCAATCCCAGTCGCAGACATATCGGTACA GTTCGATATGCACAAGATCACAAAAGTGGCGTTTCGATTACAACCCTGCA GCGGCCTAACGTGGTAAGCGATTAGGTTGTTGGATTTACACTTTAACCGC GCGCTGTAATTCACAATTTACTCAGCATTCCCGTGACTTTTCTGGTACGC GATGAACCGCCGAAGACGACGCCGATTTTTTATTGTGGCTGGATTCAGTA ATGTATGCCAGGACACCGTAGTTACTGTGATCAACCTTGTTCCTGGAGGC CAAATGCATCTGGGTTTCAGTTTTGGTTGATCTGGGTGGCGAGCATAGTT TACGTGATGGCGTCTAAAACTTGCGCTACGATCAACACGATTCTGCAAGA CTTTCGTCATTTATTGACTTTAAATTACGTTTGCAATAATGGGTATTTTC ACTTGATCCGTTCAAACAAGTGACTCACTGACGACCTGTCCTCCCTTCCT GTGCTCTTACATTCTCGCGCTTGCAGTGACGGCATAACGGAGGGAATTAA TTGGATAGTGGACGAGGCAAAAAAGCGTGCGCGACCGCGGGTGGATGCAT AGCACTACGCCAGTCTCCCATTAGTTTGTCCGTGTACTCACGAAAGTTTG ATATGGTCGGAGCCGTGTTGCTACATTGACGCCATGGAGGGTATACGTAA ACTATTCCTTCTGTAATCGTAGTTTTTGCTATGATATATATGGACCAGGT GGTCGGGTGGTCGCAATGTGATTGGTGCGACGTAACACGCCACAATTATT GCCTCCAAATAGTTTTTCTCCATTTGCAATAATCTACTTCATGGAGGAAA TTGCACACTG
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Coding sequence (CDS) from alignment at H-paniculata_contig3303:14632..17291-

>mRNA_H-paniculata_contig3303.8864.1 ID=mRNA_H-paniculata_contig3303.8864.1|Name=mRNA_H-paniculata_contig3303.8864.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=954bp|location=Sequence derived from alignment at H-paniculata_contig3303:14632..17291- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAAAGGTATTTTCAAGAAGGTCCAGGGGATACCTCCATCGAAGATACC
ACCGACCGTGGGATTGAACGATGAAAGGTATTTTCAAGAAGGTCCAGGGG
ATACCTCCATCGAAGATACCACCGACCGTGGGATTGAACGTTGGGAAGAT
GGACGTGGGGGGCTGCAAGCTAACTTTCTGGGATTTAGGTGGGCAGTTGG
GAAGATGGACGTGGGGGGCTGCAAGCTAACTTTCTGGGATTTAGGTGGGC
AGGTACGAGTCAGGTCGCTGTGGGAGAAATACTACGCTGACGCTCATGGG
CTAATTTTTGTCATGGATTCAGCGGACGTGGGAAGATTTGAGGAGGCCAG
GATGGCTTTCGGTACGAGTCAGGTCGCTGTGGGAGAAATACTACGCTGAC
GCTCATGGGCTAATTTTTGTCATGGATTCAGCGGACGTGGGAAGATTTGA
GGAGGCCAGGATGGCTTTCGACACGGTTAAGGAGCAAGGGGAACTCCATG
GGGTGCCGTTGATGATGCTTGCCAATAAGCAGGACTTGCCAGAGGCAATC
CCAGTCGCAGACATATCGGTACAGTTCGATATGCACAAGATCACAAAAGT
GGCGTTTCGATTACAACCCTGCAGCGGCCTAACGTGACACGGTTAAGGAG
CAAGGGGAACTCCATGGGGTGCCGTTGATGATGCTTGCCAATAAGCAGGA
CTTGCCAGAGGCAATCCCAGTCGCAGACATATCGGTACAGTTCGATATGC
ACAAGATCACAAAAGTGGCGTTTCGATTACAACCCTGCAGCGGCCTAACG
TGTGACGGCATAACGGAGGGAATTAATTGGATAGTGGACGAGGCAAAAAA
GCGTGCGCGACCGCGGGTGGATGCATAGTGACGGCATAACGGAGGGAATT
AATTGGATAGTGGACGAGGCAAAAAAGCGTGCGCGACCGCGGGTGGATGC
ATAG
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