mRNA_H-paniculata_contig3302.8861.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: D7FWN8_ECTSI (Haloacid dehalogenase-like hydrolase family protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWN8_ECTSI) HSP 1 Score: 437 bits (1125), Expect = 5.520e-146 Identity = 230/306 (75.16%), Postives = 259/306 (84.64%), Query Frame = 2
Query: 122 LALAVKIALYVKGSSAFVIPTWVS-KFASTSSPTASVGRSANLLEAATASGVEAEKQLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDDGSASKSVTLATLAGIVEERASVAAS 1036
LALA +A+ + F P +S +++ ++SP +V E+++ +G + E LPQALIFDCDGVLADTERDGHRPAFN+AFKIKNL+C W VELYGKLLSVGGGKERMTAHWD VGWPDCA T +ERS+LVKELHLLKTALFNQA+VDGEIPLR GVIRLVDEAI+ VPLAVCSTSNDKAVTNLVKTLMG ERLER+QIFAGDIV KKKPNPDIY+LA +TMGLDP+RVVVIEDSHIGLT+AKAAGMNCLVTKSSYT DEDFSAADQVT ELG+DG AS SVTLATL I+ ERAS A+S
Sbjct: 4 LALAGVLAIICGKADGFASPIKMSHRWSGSTSPLEAV-------ESSSTAGGQTE-DLPQALIFDCDGVLADTERDGHRPAFNSAFKIKNLDCEWSVELYGKLLSVGGGKERMTAHWDEVGWPDCAKTADERSVLVKELHLLKTALFNQAVVDGEIPLRTGVIRLVDEAIYRKVPLAVCSTSNDKAVTNLVKTLMGKERLERMQIFAGDIVEKKKPNPDIYDLAKDTMGLDPARVVVIEDSHIGLTAAKAAGMNCLVTKSSYTGDEDFSAADQVTEELGEDGEASTSVTLATLGAILRERASAASS 301
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: A0A835Z3K7_9STRA (HAD-like domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835Z3K7_9STRA) HSP 1 Score: 328 bits (841), Expect = 7.410e-104 Identity = 170/251 (67.73%), Postives = 192/251 (76.49%), Query Frame = 2
Query: 272 VEAEKQLPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDDGSASKSVTLATLAGIVEERAS 1024
V + +LPQALIFDCDGVLADTERDGHRPAFN AFK K ++CVWDV+LYGKLL VGGGKERMTAHWD VGWP ++ LV+ELHLLKT LFN+AIV G+IPLR GV+RLVDEAI VPLAVCSTSN++AV+NLV TLMG ER ER +IFAGD+V KKP PDIYNLAAE + L P RV+V+EDS IGL +AK AGM CLVTKSSYT E+FS AD+V L DDG V L L IV S
Sbjct: 23 VPSATRLPQALIFDCDGVLADTERDGHRPAFNEAFKAKGIDCVWDVDLYGKLLEVGGGKERMTAHWDKVGWPLGITEKADKQALVQELHLLKTDLFNEAIVAGKIPLRPGVLRLVDEAIEQEVPLAVCSTSNERAVSNLVLTLMGRERYERFRIFAGDVVRAKKPQPDIYNLAAEALRLSPERVIVVEDSGIGLRAAKGAGMPCLVTKSSYTGGENFSLADEVVESL-DDGD----VDLQVLGNIVMTSLS 268
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: A0A7S2FPW0_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2FPW0_9STRA) HSP 1 Score: 316 bits (809), Expect = 6.330e-99 Identity = 157/221 (71.04%), Postives = 177/221 (80.09%), Query Frame = 2
Query: 299 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDD 961
A++FDCDGVLADTERDGHR AFN AFK NL+ W VELYG+LLSVGGGKERMTAHW+ VGWP + E R LVK LHL KT LFN+ I +G IPLR GV+R+VDEAI VPL VCSTSNDKAVTNLV TLMG ER +IQIFAGD+V KKKP+PD+Y LA ETMGLD +VIEDSHIGL +AK AGMNCLVTKSSYT +EDFS AD++ ELGD+
Sbjct: 53 AILFDCDGVLADTERDGHRVAFNTAFKENNLDTEWSVELYGELLSVGGGKERMTAHWNKVGWPAEYESDESRRELVKSLHLRKTDLFNEMICEGIIPLRPGVLRVVDEAISAGVPLGVCSTSNDKAVTNLVLTLMGPERRSKIQIFAGDVVEKKKPSPDVYLLAKETMGLDAGSTMVIEDSHIGLQAAKGAGMNCLVTKSSYTANEDFSVADKIVEELGDE 273
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: W7UBX2_9STRA (Protein cbby n=1 Tax=Nannochloropsis gaditana TaxID=72520 RepID=W7UBX2_9STRA) HSP 1 Score: 308 bits (788), Expect = 9.100e-96 Identity = 152/221 (68.78%), Postives = 172/221 (77.83%), Query Frame = 2
Query: 299 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDD 961
AL+FDCDGVLADTERDGHRP FN AFK K ++C WDV LYG LL VGGGKERMTAHW+ VGWP + +R LV+ELH+LKT LF I +G++PLR GV+R+VD AI VPL VCSTSNDKAV L++ LMG ER+ QIFAGD+V KKKP PDIY LA E MGLD R VVIEDSHIGLT+AKAAGM CLVTKSSYT +EDF AAD+V ELG D
Sbjct: 53 ALLFDCDGVLADTERDGHRPCFNLAFKEKGIDCTWDVVLYGNLLEVGGGKERMTAHWNKVGWPSGYDSDAKRQDLVRELHMLKTNLFMNYIEEGKLPLRPGVLRVVDAAIAAGVPLGVCSTSNDKAVRTLIRVLMGEERMSHFQIFAGDVVPKKKPWPDIYLLAKEQMGLDARRTVVIEDSHIGLTAAKAAGMKCLVTKSSYTANEDFRAADRVVEELGKD 273
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: A0A7S2V8N0_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V8N0_9STRA) HSP 1 Score: 304 bits (778), Expect = 2.660e-94 Identity = 157/248 (63.31%), Postives = 187/248 (75.40%), Query Frame = 2
Query: 290 LPQALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAAT--PEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDDGSASKSVTLATLAGIVEERASV 1027
+P+A++FDCDGVLADTERDGHRPAFNA F+ + L+ W ELYG+LL VGGGKERMTAHW+ VGWP + E ++ LVKELHL KT FN+ I G IPLR+GV+RLVDEAI NNV LAVCSTSN+KAV NLV TLMG ER + Q F GD+V KKKP PD+Y +A ++MGLD S+ ++IEDS IGL +AKA+GM CLVTKSSYTE+EDFS AD V S L DDG+ VTL L I+E V
Sbjct: 47 VPEAILFDCDGVLADTERDGHRPAFNAVFEERRLDTDWTPELYGRLLEVGGGKERMTAHWNEVGWPSSVSLHDDESKATLVKELHLAKTDEFNKMIKSGAIPLREGVLRLVDEAISNNVSLAVCSTSNEKAVKNLVLTLMGEERYSKFQFFCGDMVKKKKPAPDVYLMAKDSMGLDASKTIIIEDSGIGLQAAKASGMKCLVTKSSYTENEDFSKADCVVSSL-DDGN----VTLEKLGNILEAATVV 289
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: A0A0G4EGM7_VITBC (Uncharacterized protein n=1 Tax=Vitrella brassicaformis (strain CCMP3155) TaxID=1169540 RepID=A0A0G4EGM7_VITBC) HSP 1 Score: 305 bits (780), Expect = 2.710e-94 Identity = 152/224 (67.86%), Postives = 178/224 (79.46%), Query Frame = 2
Query: 293 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAV--GWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGD 958
P ++FDCDGVLADTERD HRPAFN AF+ K + VW V+LYG LL VGGGKERMTA+W+ GWPD TPEE++ LVKELHL KTA+FN I G++PLR GV R+VDEAI PLAVCSTS+DKAVTNLV L+G +R R +IFAGDIVAKKKP+PDIY LAA+ M LDPS+ +VIEDS IGL +AKAAGM C+VTKSSYT++EDFS AD V +ELGD
Sbjct: 68 PFPILFDCDGVLADTERDAHRPAFNQAFREKGFDDVWGVDLYGHLLEVGGGKERMTAYWNEKEGGWPDGYRTPEEQAALVKELHLRKTAIFNDLINQGQVPLRPGVARIVDEAIAAGCPLAVCSTSSDKAVTNLVNVLLGPQRAPRFRIFAGDIVAKKKPSPDIYLLAAQQMNLDPSKCLVIEDSGIGLKAAKAAGMRCVVTKSSYTQNEDFSGADMVIAELGD 291
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: A0A7S1ZBJ4_TRICV (Hypothetical protein n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZBJ4_TRICV) HSP 1 Score: 297 bits (760), Expect = 1.000e-91 Identity = 150/241 (62.24%), Postives = 177/241 (73.44%), Query Frame = 2
Query: 293 PQALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEE-RSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDDGSASKSVTLATLAGIVE 1012
P+A++FDCDGVLADTERDGHRPAFN AF ++ W VE YG LL VGGGKERMTAHW+ VGWP EE R VKELHL KT +F I +G IPLR GV+RLVDEAI N V LA CSTSNDKAV NL+ TLMG +R + Q+FAGD+V KKP PD+YN+A E MGLD S+ V++ED+ IGL +AKAAG+ CLVTKS+Y E EDF+ AD + ELGDD VTLATL ++E
Sbjct: 45 PEAILFDCDGVLADTERDGHRPAFNRAFAENQIDEEWGVERYGVLLEVGGGKERMTAHWNEVGWPSAMPDDEEGRQAKVKELHLQKTGIFMDMINEGAIPLRPGVLRLVDEAIENGVRLACCSTSNDKAVKNLIATLMGPDRAAKFQVFAGDMVKAKKPAPDVYNMAVEEMGLDKSKCVIVEDTDIGLGAAKAAGIKCLVTKSAYAEKEDFTGADLIVDELGDDPETG--VTLATLGSLLE 283
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: F0XWZ9_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XWZ9_AURAN) HSP 1 Score: 292 bits (748), Expect = 4.410e-90 Identity = 142/218 (65.14%), Postives = 171/218 (78.44%), Query Frame = 2
Query: 299 ALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSEL 952
AL+FDCDGVLADTE DGHR AFNAAFK K W V+ YG+LL GGGKERMTAHWDA GWP A ++R LVKELHL KTA+FN+ I G IPLR GV+RL+DEA+ + VP+ VCSTS+++AV NLV+ LMG ER + +QIFAGD+VA KKP PD+Y LAA TMGL+P+R VVIEDS IGL +AKAAGM C++TKSSY + EDF+ AD+V +L
Sbjct: 42 ALLFDCDGVLADTEPDGHRVAFNAAFKEKGFADDWSVDKYGQLLETGGGKERMTAHWDAAGWPAGYAGGDDRRALVKELHLRKTAIFNELIEAGSIPLRAGVLRLIDEALADGVPVGVCSTSSEQAVRNLVRVLMGRERYDALQIFAGDVVANKKPAPDVYLLAATTMGLEPARCVVIEDSSIGLAAAKAAGMKCIITKSSYADREDFTIADEVVDDL 259
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: A0A7R9WSC9_9STRA (Hypothetical protein n=1 Tax=Craspedostauros australis TaxID=1486917 RepID=A0A7R9WSC9_9STRA) HSP 1 Score: 293 bits (750), Expect = 9.860e-90 Identity = 145/239 (60.67%), Postives = 181/239 (75.73%), Query Frame = 2
Query: 296 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEERSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDDGSASKSVTLATLAGIVE 1012
+A+++D DGVLADTERD HRPAFN AF+ NLN WDVE YGKLL VGGGKERMTAHW+ VGWP ++R VKELHL KT +F I G +PLR GV+R++D+AI ++ LAVCSTSN+KAV NLV+TLMG +R + QIFAGD+V KKKP PD+YNLA +TMGLD S+ V++EDSHIGL +A AAG+ C+VTKSSYT EDF+ A+++ ELGDD A+ VTL L ++
Sbjct: 83 EAILWDMDGVLADTERDAHRPAFNIAFEENNLNTDWDVERYGKLLEVGGGKERMTAHWNEVGWPQGFPEGDDRPAKVKELHLRKTDIFMDMIKTGGVPLRPGVLRIIDDAIAADLRLAVCSTSNEKAVRNLVQTLMGPDRAAKFQIFAGDMVQKKKPAPDVYNLAVDTMGLDKSKCVIVEDSHIGLGAAMAAGIACIVTKSSYTAGEDFTGANKIVEELGDD--AATGVTLENLESLLN 319
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Match: B5YPA5_THAPS (Possibly a phosphatase from the CbbY protein family n=1 Tax=Thalassiosira pseudonana TaxID=35128 RepID=B5YPA5_THAPS) HSP 1 Score: 291 bits (744), Expect = 1.720e-89 Identity = 150/240 (62.50%), Postives = 185/240 (77.08%), Query Frame = 2
Query: 296 QALIFDCDGVLADTERDGHRPAFNAAFKIKNLNCVWDVELYGKLLSVGGGKERMTAHWDAVGWPDCAATPEE-RSLLVKELHLLKTALFNQAIVDGEIPLRKGVIRLVDEAIFNNVPLAVCSTSNDKAVTNLVKTLMGTERLERIQIFAGDIVAKKKPNPDIYNLAAETMGLDPSRVVVIEDSHIGLTSAKAAGMNCLVTKSSYTEDEDFSAADQVTSELGDDGSASKSVTLATLAGIVE 1012
+A++FDCDGVLADTERDGHR AFN AF++ +++ W + YGKLL VGGGKERMTAHW+ VGWPD A PE+ R+ V LHL KT +F I +G IPLR GV+RLVDEAI N V LAVCSTSN+KAV+NLV TLMG ER + QIFAGD+V KKKP PD+Y +A +TMGLD S V+IEDSHIG+ +A A+G++CLVTKSSYT EDF+ A ++ ELGDD A+ VTL TLA +++
Sbjct: 39 EAILFDCDGVLADTERDGHRLAFNRAFQLNSIDESWSEQRYGKLLEVGGGKERMTAHWNEVGWPD--AIPEDGRAEKVLGLHLQKTDIFMDLIDEGAIPLRPGVLRLVDEAIENGVRLAVCSTSNEKAVSNLVSTLMGAERASKFQIFAGDMVKKKKPAPDVYLMAVDTMGLDKSGCVIIEDSHIGVGAAVASGISCLVTKSSYTAGEDFTGAKKIVEELGDD--AATGVTLDTLASLLD 274 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3302.8861.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3302.8861.1 >prot_H-paniculata_contig3302.8861.1 ID=prot_H-paniculata_contig3302.8861.1|Name=mRNA_H-paniculata_contig3302.8861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=313bp MRLSHVCLALAVKIALYVKGSSAFVIPTWVSKFASTSSPTASVGRSANLLback to top mRNA from alignment at H-paniculata_contig3302:7680..16387+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3302.8861.1 ID=mRNA_H-paniculata_contig3302.8861.1|Name=mRNA_H-paniculata_contig3302.8861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8708bp|location=Sequence derived from alignment at H-paniculata_contig3302:7680..16387+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3302:7680..16387+ >mRNA_H-paniculata_contig3302.8861.1 ID=mRNA_H-paniculata_contig3302.8861.1|Name=mRNA_H-paniculata_contig3302.8861.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1878bp|location=Sequence derived from alignment at H-paniculata_contig3302:7680..16387+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |