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Homology
BLAST of mRNA_H-paniculata_contig3301.8860.1 vs. uniprot
Match: A0A6H5K3N5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K3N5_9PHAE) HSP 1 Score: 221 bits (562), Expect = 2.040e-56 Identity = 111/183 (60.66%), Postives = 134/183 (73.22%), Query Frame = 2
Query: 38 DPEVLTIFFAAAYNGDLAVVKSIVKDKRVPVDAVDPVQGSTALLWACYGGSLEVAEWLVKDAGAKVGHKNKDDRNALFFASEHCHKPVAAFLVGK-GVDVNSADASSGHAPLHRACIAGQVRDQAGAEEMITWLLTSARADPQVADRNGRKPGEADLAVEAPTLKPSRRADEIRKMLQEARRG 583
D VL F AAY+G+LA VKS +K+ + D DP +GSTALLWA GGSLEV EWLVK AGA GH+NKDDR A FFA EHCH PVA FLVG+ GV+VN+ D SGH LHRACIAGQ R++A A E+I+WLL+SA+AD + D GR PG ADL+ EAP+LKP+ +A I K L++AR G
Sbjct: 7 DDSVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQAGANAGHRNKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADAKATDLGGRMPGNADLSAEAPSLKPTAQAPAIAKSLEDARSG 189
BLAST of mRNA_H-paniculata_contig3301.8860.1 vs. uniprot
Match: D7FHR2_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR2_ECTSI) HSP 1 Score: 139 bits (349), Expect = 4.870e-30 Identity = 69/114 (60.53%), Postives = 86/114 (75.44%), Query Frame = 2
Query: 245 NKDDRNALFFASEHCHKPVAAFLVGK-GVDVNSADASSGHAPLHRACIAGQVRDQAGAEEMITWLLTSARADPQVADRNGRKPGEADLAVEAPTLKPSRRADEIRKMLQEARRG 583
+KDDR A FFA EHCH PVA FLVG+ GV+VN+ D SGH LHRACIAGQ R++A A E+I+WLL+SA+AD + D GR PG ADL+ EAP+LKP+ +A I K L++AR G
Sbjct: 25 HKDDRTAFFFACEHCHTPVANFLVGQAGVEVNAKDKPSGHTALHRACIAGQTREKAQATELISWLLSSAKADTKATDLGGRMPGNADLSAEAPSLKPTAQAPAITKSLEDARSG 138
BLAST of mRNA_H-paniculata_contig3301.8860.1 vs. uniprot
Match: D7FHR4_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FHR4_ECTSI) HSP 1 Score: 87.4 bits (215), Expect = 6.060e-17 Identity = 42/71 (59.15%), Postives = 49/71 (69.01%), Query Frame = 2
Query: 38 DPEVLTIFFAAAYNGDLAVVKSIVKDKRVPVDAVDPVQGSTALLWACYGGSLEVAEWLVKDAGAKVGHKNK 250
D VL F AAY+G+LA VKS +K+ + D DP +GSTALLWA GGSLEV EWLVK GA GH+NK
Sbjct: 7 DESVLAGLFLAAYSGNLADVKSTLKNNALSADVADPNKGSTALLWASTGGSLEVVEWLVKQGGANAGHRNK 77
BLAST of mRNA_H-paniculata_contig3301.8860.1 vs. uniprot
Match: A0A835YJP1_9STRA (Ankyrin repeat-containing domain protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJP1_9STRA) HSP 1 Score: 94.7 bits (234), Expect = 1.350e-16 Identity = 55/143 (38.46%), Postives = 70/143 (48.95%), Query Frame = 2
Query: 65 AAAYNGDLAVVKSIVKDKRVPVDAVDPVQGSTALLWACYGGSLEVAEWLVKDAGAKVGHKNKDDRNALFFASEHCHKPVAAFLVGKGVD-VNSADASSGHAPLHRACIAGQVRDQAGAEEMITWLLTSARADPQVADRNGRKP 490
AAAY G L VK +V + D D +GSTAL WAC GG LEVA+WLV++AGA +N+D R VNS D G PLHR C AG VR ++++L+ RA+ V D G+ P
Sbjct: 10 AAAYKGRLEDVKRLVSKEGCDCDKPDSFKGSTALHWACRGGKLEVAQWLVEEAGADPAARNQDGRXXXXXXXXXXXXXXXXXXXXXXXXXVNSKDDIDGQTPLHRLCSAGLVRGLPAVTGVLSYLIKDGRANVYVTDNGGKTP 152
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 7 |
| Model size | 4114 |
| Cds size | 2250 |
| Stop | 1 |
| Start | 1 |
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3301.8860.1 >prot_H-paniculata_contig3301.8860.1 ID=prot_H-paniculata_contig3301.8860.1|Name=mRNA_H-paniculata_contig3301.8860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=750bp
MDPEVLTIFFAAAYNGDLAVVKSIVKDKRVPVDAVDPVQGSTALLWACYG
GSLEVAEWLVKDAGAKVGHKNKDDRNALFFASEHCHKPVAAFLVGKGVDV
NSADASSGHAPLHRACIAGQVRDQAGAEEMITWLLTSARADPQVADRNGR
KPGEADLAVEAPTLKPSRRADEIRKMLQEARRGKTSKAAAEVLATPKPVV
VAAPRAAVLTPAPAPTPVPVPAPAPAPAPAPNLVAMRASALASSTAAEPA
VTAPAPTAAAAPAVGGGSSGIAARAAAFRASSVPSKPPAPAAAAPASSGR
PVATVSSRVAERAAALAASTGATVTASAAAVAAPPFDAEPDTAPVSSTPA
VPATSSAAPPDSTGSGQPSWAKPRAGGILPRSGGSLPVTANEAPVGSPAR
KTAAAAAAVVSTPMVKPIAYSRPSTKRPTIAATSTPAVAAVLAAPAPAPA
PAPAPAPAPAPAPTAVPSARPVTSEPIVASTPLTRYQRSASGSVSSGPTA
PRALATPPAKGAAHAVIAASSAPKASALAAAFESKARSRQSQPPPRRGDS
GLSGAARAARAPALSSSTSGSTGRSGPSSQNGRPARSSDVPSNCQPAPSV
GPRLTTTISESSSSGSSGNGRSASASSVPRVTPQELLGTGSVMKKKQVYQ
AAAQKTSTSTRNGSPRGAPGTMLSKGKKKESSFMDKFVQMFSISPQSSRE
SSPARSPPRKSPARGLSKSPHRTNGATQHTEEQGRLGFFNSNVSFKEKE* back to topmRNA from alignment at H-paniculata_contig3301:5033..17440+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3301.8860.1 ID=mRNA_H-paniculata_contig3301.8860.1|Name=mRNA_H-paniculata_contig3301.8860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12408bp|location=Sequence derived from alignment at H-paniculata_contig3301:5033..17440+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GAACAGGCGAGGTGGATAAAGCGGTTTGCGCGTAATGGATCCCGAGGTGC
TGACCATTTTTTTTGCGGCAGCCTACAACGGGGACCTGGCTGTGGTAAAG
TCTATCGTGAAGGACAAGCGAGTTCCTGTTGACGCGGTAGACCCTGTTCA
GGTGTGTCTCTGGTTGTTAATGTAAACGAAACAGTAGTTCGGTGTGTGGG
GCTAGCTGCGCTTGTTTTCGATTCACGATACTGTACCATACCGTTGATTC
TGAACGACTTCCGCGTGGCATATGTCACGAAAGTACCTGTGCATTCTCGA
GCGCTCCATGGTACAAACTGTTGTGAGAGATGCGGTAGTTTGTAGCTTCA
CATTATGGTGGAGCTGCGCATATGTGGTTGTTCTGTGGCCTGTCTGGCAC
CTCGTGTAACGCACAACGCATCAACGACAATGGAAAAAATGATAGGAATG
ATGTAGAAGAAACATTGGCGGTGCAAAAAGTCCAACAGTACACTTGGTAT
GGCGGGAGGCGGCGGATCTCTCGTCATCTCATTTTCCGACAAATAACGCA
TCGGCGTGTTGTGGGCGGGAAATGGAGATGTGTTTCCAGAAGAGCGGTGC
AATTGCTTCCCACCCTCCAGCTTACAAAGTCCATGCAGCATTAGCATGTT
GGTTTTCTTCATGATCTCATGAACTGTCGAGTTACACAAAAAGCCTTGAA
GTTTGCTTTTCAGGGCCTAAAACACTCAATATAAGACATCGTGTGTGTAC
CGTACAGACAGTAAGTTCTGTACTGTATTCACTGTTGTATGTAGCCCTCT
TAAATGTTCCTTATTTTTCATTTGTATTGACAGTCGGGACAGAAAGGAAG
GGCCCTGAAAAGATAGGTGGGGCGTGTAGACGTTTGATGTATGAATAGTC
AGTCACCTGTGTGATACATCTTTTTGCCACGCCCTAATTTTGCCCCGACC
GGACCGATTATAGCTGTTCTATCTCTCACACAAGCCTTTGGGGCTCTTCT
CTTCCCCTGGTGTCTCCTTGTCCTCAATAGCAATCACACTTTTTATCAGG
TTGTACTGTACTGTTGTAGACAAGCCGAGCCCATGAGCGATGGATGATCC
ATAATCCGAGATTCAGATCACGCCCTAGCAACACAGGCACTCATCATCGA
GTCCCTCGGATAATACTATTCACTAGGGACGGAACATGAAATCAGATAAC
CCCCCCTCAACAAGGTATGGAGCTGAATGAACCCTACTCGTTCTGTTTTG
ATTTTACTTAGTAATTCGTGTCTTCTCGACGATGTGTTCATTTCCCCAGG
GCTCCACGGCACTACTCTGGGCGTGCTACGGCGGCAGCTTGGAAGTCGCG
GAGTGGCTTGTAAAGGACGCGGGTGCTAAAGTTGGACACAAGAACAAGGT
TTGTACGGACGATTCAGTTTCGTATAATACGTGGCGGGTGCACGATGGTA
CGGTACAGTACCGAACCATAATGTGCGAGCAGTTGTATAATGGATGGGAG
GGAAAAGCCCTCCCCACCTAAAATGATGTCAAAGCGAGTACATGCATACA
GCAGCGCCGAGTTGTCTTGTACACGCACAATTTACGATACCGTATTCAGG
TTTGCGAGCACTAGCCCCACTTCACTCAGGCAGCTGCCACACGAGTGGAA
CGCGGGGTTGTCGCTGCATGGTAGTCACGTGTGACATTCTGTTCTACCTT
GCCTCTAGAAAAGCACGTAACCTCCAGGTGGGCGGGTAACTTTTGAAGCT
TTTCACATGATCCCAACCTATATAACGCAGTGTATTTTTTGGCGAGGTCA
TGTTATGAACCTGTTCGCGGATGGCCACGTGAGAATTGGCCGATCAGGGT
TGAAAGAGCCAACATCGTGCCGAACATCTCCAACTATCGCACTTGACCAA
GTGGTGAACTTTACGGAAAGCCTGAATCAGCGCCATCATGGCCATTTTGC
TTTTTCGAGCAACGAGGGCACACGTTGTGGGCACAAGAGGGCGTGACGTC
ACCTGTCATCGCAGCTTGTTGAAATTGTACACCTCAACCATGGCATTCGA
TATATATTGTCAACTATGGGAAGTGAAAGGTCCGGTCTGTCTTATCCAGG
TGCTTCTGAAAAGATTTTGGCCCGTTTTTTTAGGTCGATCATTGTTTTTG
TTATTGACCATCTCCCGCATCATGGAGATACAACGAAACCAATGTGATTT
TTTAGTTCCGAAACATAATTGGGAAAAAACAACAAAAATCAAACTACCCC
GACAGGACGAGGATACCCGGTGTCATTCTGATATTGGCGGGTGTCAACCA
TTTGAGTATCATGCATACCTGACTCTGTATCAGTATGTCTTGAAGGACGG
AAAAAGCGATACTCAAAATTCGTTTTTTAATCGTTTTTCGAAAAAGACCG
ATTGTTGTGTCCTATTTAATAACGAGACAGAGGAACGTGGAACTGCATGA
CCGGTTTTGAATCTGTGAGGAAATCTTTTTGTTTGGCCGTCGCTGCCAAC
AGAGCGCACAAACACAACATGTACCATAGAGAATCCCCAAAAAGATGCAC
GGAGAGCTCCAGTACACGCGCACTAGTTTCAAACCCGGCTGTTCCTCGGC
TAAACACGCTCCGCTTTGTTCGAGGTAAATCGGTTCAGTTTTGCATGATA
TGCAACAATCCGTGTCAATTTTGAGAGAACAAAATGTCCCTTGTTGGATA
CTACTTACTCCGTCCGTCTGGCTTGCTACGAGCGCCTGAAAACATGAGTT
CTCGTTCAGTCTTACGGATTCAACCCAAGCTACACCTTGTTGTACTGAGG
ACAGTGAAGCTGTCACGAACTCGGCGGTAGTCCTTTTACCAACTTTATGT
GGCTCACAACCTGATCGCTATCCACGTTACTCTTGGGCTCTGAAATCGTT
TTCTAGACAACCTATCTATATATATATATATATATATATTTAATCCAAAT
GACTTTCTCCGAAACTTCTTCAATCATTTTATCGCTCAACTAATCACGGG
CGATAATTCAAGAATGGGGGGGGGGGGGGCGTTGTTCAAGAAGACATACC
CCATCAGTACACAAATGTTTTGAGTACTGTGCACACAGTACAACAAAATA
GACATCACGGTATGATGAAAACGCTTCGCTTTGGTGGTCAATCGCCACTG
TCAAGAATTAATTGCCACCTACGATCGGACTGAAGTGTGCGGCATGAATG
TTGTCACTGAGTGACAGCGGGAATACCAACCGGCAGTCCCTACCTCGTCC
CATACATATGTATGGGTGATGACCTCGGTTCGACCAATAATAGGGATAGT
TGGTGCAGTCTACTTCGCATCGGGTAGCCCGCCATGATCCCGATTACGTC
GGTAGTATCAAAATGGAAATAAGAGGCTGCTCTAATGGTACATCGATTTT
TGTCAAAAATTCAATCCAGTTGGTTTGGACCGTGTGTTCACGGACTACAT
AAAATCTAATTCCGTTTTTTTTTTTTTTAGCTCAAGTACGATGAAAATCA
TCTCGTTGGCCATCGCCCCAAACAACCTCAGCGTTGAACTTTTTCAAGTC
CCCGAGCTTTTTTTTCCCCATGCTGAGGAATTTTGATCTGTTGGAAGACA
AAAGAAAGAGTCAAGTCAAACGTTGAGCCGAGAAATGGACGTTCTCATAA
GTGATTGGTACTTTATTGCCCTTCTGTGACACTAAGTGTAAGTGGCGTAG
CTCTTGATCACATAACCATCATGTACTTGATTTTCTCTGAATATATTGGT
AACTGGGTGAAAAATCACATACGTTTCGAGGGTTTCAGTAGCCATATGTT
TGTGTTCCATATGTCACGCGGATTGTTGTAGTTGCCCCAGTACTTAACCA
ATTTCCCGTGAACCAATGTCTGGCGAATGCATTTGACCACGAGCTATTGT
CTGAGCTGCAGTGCCCGTGTACTGGGGGTCTTTCGTAGGGTATTGACTTG
GCGTACGCGTTTTATAAAAAGCAATTTTTCAGGCCCCAGAGACTGCACAA
GGGGACGACAAGAACCCAGATAATGAATGCGTGTCTCCCGCATGCGGTAT
GCCACCAATGCTAAACACTATTTTTGTTTTTATTTCCCAAAAATGGACTA
GTGTGGGAGTAAAAACTTTGCTGCTGGGGTTTTCCCTTTATCTCTGGAAA
AAAGAATCATTCCATAATTAAGATATGTTTGGCTACCCCGGAAATAGTGT
GGATTGATGGAGGACTTGGTCGCGGATTGGTACAAAAATATTCGGCATGA
CGAAACAGCTGGAATTGTATTGAGTATTTCTGAATTGGAATATTGCGGTA
AGATTTCGGTGACGATATTGAGTATTTTAGAAATATCTCTTGCGCGTTGT
TAACACCTGAATTTTTCATTTTAGGCACTGCGAGCAGCGCGTTATGAATC
GTAACGCCTGAAACTGCACCGAAGGAACGCGCATTATTGGTTCATTATAC
CGCATACCGCGGTATAACTCTTGACGCTCGATACCGCATCAAAGATACCG
ACTATTTTAATCGTGCAATGGTTGTGTTATAGTGACGTGTGAAGGTATTT
TGAAACAGTCAGAAAAGTGATTCAGATGACCATGTGAAAATGCTTCCAAA
AACACGCTTTTTCTTAAAGATGAGATAAAAAAATCTCAATAGATATCCTC
CATCGCATTGGCGTTTGTTTGTTTTTCCATAAAAGCTCACCGAGACCGCG
GCGATCCGCGCACAACTCTATTTTATCCCTCCTGCGATTGGTTTTCTCCG
TCCGTCCTTGTTATAGGATGATCGTAACGCGTTGTTTTTCGCGAGTGAGC
ACTGCCACAAGCCTGTGGCTGCCTTTCTGGTTGGGAAGGGCGTAGACGTG
AACTCTGCCGATGCTTCCTCGGGACACGCACCACTGCATCGCGCGTGCAT
CGCAGGGCAGGTTAGGGACCAGGTGCGGCAAGAGTTGGTGGGGCTGCTTC
CCTCCCCCCCCCCAAAATGTTCCGATTTACTTATTTTCCTTGATACGTAC
GATAGCTTCACAGTATCGCCTTTCCTTTGGCCATGTGGTATGATTTCTGC
ATGGAATTTATGTATCAGTGGAGGCCTGTAGGGTGTCTGGTATGTATACG
ATTTTTGCGCCTGAGGCATCTTGCAATAGCCGATGAGGTTACTTTGAAGG
GAGCCCCAGTACAGGGGGAAAACTGATTTTGTCCTGAAAGCACCCATCAT
CGCAATACGATCTGGTTTAAAGATGGTGTCGGTGGGTAGTCGTTGGTGTC
CAAGGTCACAGGCGCCTGCTCGAAAGGCATGCCGTGAATACTTCATGGAT
GCAGTATTAAGGTCTAACTTTTTGCATCGTGGTCATTCATGTCGGTGCCA
GACCTGGTGTACAAAAAGAGCTGACGTTAAGATATATAACGATGGACGTG
TTTTATCCCAGTCGAGGAGCGCGCAGGTGTAATAAGTTATTTATCCCAGT
CGCACAAGAACTGACAGACGACTTGTTGATCGTGATGACGATGGTACTGT
GTTATTGTACCAGACGGAAGTGGCGCTTCAGGCGCGGCACAGTCAAGGAA
CTCTGTCCGGCAATCCTGTTTGTTGTAGAGTTTACGAAGGGACTAAGTGG
TTTCCTGCAAGTTTGATGGAGCAGCTCTTGAAGCCATAATGAGTAGCCGT
TACGTGGGTATCCAAACGCGTGGGATAGATGGGTTAGTGAGAGGGAAGGG
AGTCTGCTTTCTGACACAATATTTTGTAGTTCGTATTAGTATGCAACCAC
CTTCACGCGGGTGGCTTATGTAATATAAATTCTCATAAACTGCCCCATCT
CGTCATGTCGAGAAAAACCCTGGGATACGGAATGGAAATGACGTGATCGC
ACACCAACCGGTGGTCAGGGTTTACTTATCCTAGCCCTTCAGCGCAGGCA
AATAATAAAGTTACTGTGGATATCAGAGGCCTGTTTACCTTATGGGGTGG
TTTACACTTTGTGGTTCCCCGACGCATGCAAACCCAGCGTCGGAAAGCAG
GATAACTTCAAATCTAACCTACCTATCAGGCAGAGCGTGCTTTGGGAAAG
CTCAAATTGGCGCCCGGCCCCGATTCGAGCAAACAATATGTGCTGCCCAT
GGTTCAGGACGGCCCAGTCTGGTGACGTCATAATGACTCCTGCCTGAGTT
AATATGCGGAGTTGTAGAGTCAATCATTTTTTTCACCGAATAGTTGAATA
CTACCGGGTCATCGAATAACGATACCTCGATCCTCCCGACGTCATCTCTT
CGTTTACGAACGCCAGGCCGGAGCTGAAGAGATGATCACTTGGCTGCTCA
CCTCTGCCAGAGCAGACCCTCAGGTCGCGGACCGCAACGGCCGCAAGCCT
GGAGAGGCCGACCTGGCCGTGGAGGCGCCCACTCTCAAGCCTTCGCGGCG
CGCAGACGAGATCCGCAAGATGCTCCAGGAAGCACGGAGAGGGAAGACTT
CAAAAGCTGCAGCCGAAGTGCTAGCCACGCCTAAGCCGGTGGTGGTTGCT
GCTCCGCGAGCAGCGGTGCTGACTCCCGCCCCAGCTCCAACTCCAGTGCC
AGTTCCGGCTCCAGCTCCAGCTCCAGCTCCAGCTCCCAATCTAGTGGCAA
TGCGAGCATCCGCACTCGCGTCCTCGACTGCCGCTGAGCCTGCCGTGACT
GCTCCTGCGCCAACCGCTGCAGCTGCTCCAGCTGTCGGCGGCGGTTCCAG
TGGAATCGCGGCCCGAGCAGCCGCATTCAGAGCATCATCTGTCCCATCTA
AGCCTCCCGCCCCTGCCGCCGCCGCCCCTGCTTCATCTGGGCGGCCTGTT
GCAACTGTGTCTAGTCGCGTGGCGGAGCGAGCGGCCGCTCTAGCGGCGTC
CACGGGGGCTACGGTGACAGCTTCCGCGGCGGCGGTGGCGGCCCCGCCCT
TTGACGCCGAACCCGACACAGCCCCCGTTTCGTCCACCCCCGCTGTGCCG
GCGACCAGTAGCGCGGCCCCTCCTGACTCGACGGGATCCGGACAACCCTC
TTGGGCGAAGCCTCGCGCCGGAGGCATCTTACCTCGCTCCGGCGGCAGTC
TCCCGGTGACAGCCAATGAGGCGCCGGTGGGATCGCCAGCCCGGAAGACG
GCGGCGGCAGCTGCCGCGGTGGTGTCTACGCCGATGGTGAAACCTATCGC
CTACAGCAGGCCTTCAACCAAGCGACCCACAATTGCCGCTACTAGTACAC
CGGCTGTTGCTGCTGTTTTGGCCGCTCCTGCTCCTGCTCCTGCTCCTGCT
CCTGCTCCCGCTCCCGCTCCCGCTCCCGCCCCGACAGCCGTACCCTCAGC
CAGGCCGGTGACTTCCGAGCCTATCGTGGCATCCACTCCTTTGACGCGTT
ACCAGCGCTCCGCGTCGGGATCTGTCAGCAGTGGCCCCACCGCCCCGCGC
GCCTTGGCCACTCCCCCCGCCAAGGGGGCCGCTCACGCCGTGATCGCCGC
CTCAAGCGCCCCGAAGGCCTCGGCTCTCGCGGCTGCTTTCGAAAGTAAGG
CCCGCAGCCGCCAGTCTCAGCCCCCGCCGCGGCGAGGGGACTCCGGGCTG
TCTGGGGCGGCGCGGGCGGCACGGGCGCCCGCACTGTCCAGTTCTACTTC
GGGGAGTACGGGTAGGAGCGGTCCTAGTTCCCAAAACGGGCGCCCTGCTA
GATCCAGCGATGTCCCGTCAAACTGTCAGCCCGCCCCGTCGGTGGGGCCG
CGCCTGACGACCACCATCTCCGAGAGCAGTAGCAGCGGGAGTTCCGGCAA
TGGGCGTTCGGCTAGTGCTAGTAGTGTGCCACGTGTGACGCCGCAGGAGC
TGTTGGGCACGGGCAGCGTGATGAAGAAGAAGCAGGCGAGTGTGTTGTGT
TATGTCGTGTGATGGGTGAATAGTTGGGGTGGTTTGGTTTGGTCGATTTC
GGTCAGTTTCAGGCTCGCATAAAATGCTTCAGACCGTCAGATTGGTTTCT
TGCTCGAATAAATAGTTTGTTTTCTTGTGAGAAGAGGAACCACAAATCCG
CTTACTGAACGCTGTTTCTATGGCCGGTGTCAGTAGTACCTTCGCAGTAT
CGAGGAGCATGGCTGCGGAACACACCCGTGTCTTATGCATGGTACAAACA
AGAACAACCTGCGGCGCAAGATTGACAAAGTTCCGTTGAGGTTCTTAGCA
TGTCTTGTGTCACCGTCGTCCGTACCGTGGAGAGGCGCTCTGTGATTACA
TTCGTTCAGGCTGTGTTATCGATGTCAGAGATTTGACGATGAATATGTAG
TCCTGTTCCGACGGGGTCAGACATTTTACCGTCACGAATTCTCGGTGGTT
CCTATGCGTCTCCCTCAGGTGACATAATTTCACCATCCCGGAAATCTGCG
AAAACAGTATTCGCTTGCGTTTCAGATTATGTGGGCACATAAAATGAAGT
ATTGAAGTACTTTTTTCTCGTTTTACTCTTTTTCGGAGCAACTGAAATTC
GATGCCAACCTCACCTCGACGCGAACCTTTTTTCTGTGTCGAAGTGCTCG
AAGTATTTGAATTCGTCATTCTCCAGGTTGAGCGATTTCTTGTTCCCTCT
CCTTATGATAGTCGTGTCTTTCCATGATATATTCTTTATTCCTCGTCCTC
TTGGGTCATATTCCAATTGTTATGTGTGTTATGACGGGCTGGAATTTTCC
CAGGTGTACCAGGCCGCTGCCCAAAAGACGAGCACCTCGACACGGAATGG
AAGTCCTAGGGGCGCTCCCGGTACTATGTTGTCTAAAGGGAAGAAGAAGG
TGTGAATTAAATATCGCTCCCCCCTCCCCCCCTAAAAAATAAACTCAGAA
ACGTAGGGAAGAGCAATTGGCCACTGAAATTTTCTCTGATATGAACAACG
CTGTCCGTCCTCCCGAAGACGCGTGGTCGATGGTCTAGCATGTATGGCAT
GCAAAACAAGGGTACGCCCCCTCCACCCCTAGCTTTGAATGTTGGCTGGT
GCTGTCTGCGACATTGTGATTTTAAGGGTATTTCTTGTCACACACTCACA
CAAGACAGACACGATGCTCCGTGGGTATATTTTCGATCACTAGCTCACGG
GCGTAGAACGAACACGTCAGCCATCTTCTCGATTGCGCACATGGAGGTTT
TCGTGGTAGCGTGCTTCTGAGCGACCGCTAGTTGACCGCGGTAGATAGAT
CGCCATTCGCCGACCGACCGAACGACCGAATCATTTTCACCTCCGCGCGC
AGGAATCGAGCTTCATGGACAAGTTCGTGCAGATGTTCTCTATTTCGCCG
CAGTCGTCTCGAGAGTCGTCGCCGGCCAGGTACGCAGATCAGAGGTTTCG
CCGCAAAGACATGATGACAACTTCCACCCAAGAGGTCCTTGTTGAGTCTT
TTTTGTGGGTCCCCGAGAGAGACGTTGTGCTCTTTTGCCAGGCCTCAGGC
ACAATAGAGAGCGGGAGAGCAGCTGGGGTTAGGTTGGGCCGATCATTGGT
GTTGTATGCACGCGGGTTGGGTCTGTCGTGATTTGCAAGTGCTGATTTTT
TTTTTTTTCTTCGTGAGCACGTAAGGTGCTAAGATACCCATCGGTGAAGG
AAGTCGGGGTTGGAGGTGGTCTGGATTGGTGTAAGTCATTTGTCACCGTA
TGATCAACGTCCTGAATGGTTACGTTTTTCGTTCATGATTTTATATGTTG
AGCTCTAAGTCGAATATTGGCTTGGAGTAGTTCATTCCTACATGTTTTTT
TACTAAGGGAGTCAAAAGGTGATTAGGATGCAAGGATATCGAGTGTTCAA
CTGACATGCATTCGGACAGACCCACAGGGAGTCGTCTTGTGACAATATGC
TCGTCGGTCATAACGTCATGTTCCGGCCGCCGCGTGGATGTTGACCAAAA
CTGCTCACCTCACACGTACATCGGTTTTTTGTTATTGCACCTGGGTGCGA
AAATTTCTACACGCTCTCATTGCGAGAATAGAAACCTCACGCGGGCGAAA
GATATTTTCCTCGACACACCGTTCATTTGTCCGTAACGCCGTAGTTGTCG
AGATGATCGCGCTCGATGAAGCACCCGGGTGGATGCGTGTGGTATCAGAG
GAGAAATTTTCGGTATCAGCTATACACAAAATGCTCTTGATCGAGGAATC
AGGTTCTCTCAAGTATGCTCGCGACAGGGCAGGGTTGGCTGTCGAGGGTA
ACGACCGCCAACTCGTGCATTGTTTGAAAGTGCAATACAGTCGTTCTTTT
CGTCTGGCAATAGGCATGGGCGCCTAGTAAAATAGGCATGGGTGAATCTA
ATCCTATCTGGTGATCCTTTGGGGTTCTCATCGCGGTTGTACTTGACTGA
AAATATGGGAGACAATCCCATTAAGCCAGAAGGACCTCCGATGATACGGT
GAAACTCAAAGGGTGGCCACCCCCCCCCCCCAAACTTGCGTTTCTCTTTT
TTTCGTTTATCTTTATCATCGTTGTCTTGCTTTCGGCATCAGATCACCCC
CTCGCAAGTCACCCGCGCGTGGTTTGTCTAAAAGCCCGCACCGCACGAAC
GGAGCCACTCAGCACACGGAAGAGCAAGGAAGGTTGGGCTTCTTCAATTC
CAACGTGTCGTTCAAAGAGAAGGAGTGAGGGTCGTTCCGAAGAACGCTCT
CCAGAAAAGTCTGTGGACTGCTGAGAAGCGGGGAGCTGAAGCTTAAGGAA
AGGATACGCGGTGGGCGCGTGGATAGATGGATATGCAGGGGGAGGGGTGT
TCTCTGGCATATGTGGTGCTCGCCTCCCCCCACCCCTGCTTAACCACCCC
CCTTGTCTTTCCTGGCGTGATTTTTGTACACAAGTAAACCTCGGCTTGTT
TATTCGCCCAGGTGTGCGGCAGACTCTGGACGTGAACCGTACGTAGTGGT
CGTGGATAGCTGACCTTTTCACGTGGGGTAAATGACGAACATTAAAGGGA
GTTGAAAAGGTGAGAGAAATGGATGTGCGGCTGCCTGCGATATCGGGCGG
GGGCCTTCATCTACGGGAGCACCTGACTACTAAACTGTTAGGGCGGGGAA
AAGAGGAGGAGGCACACTAGCAACTTGCACTTGCGGCCATCGACCGAAGG
GCCCGATTCCTGTGGGGAGTGAGTGGTTTTGTTGGGGGGCTCGCTGTAGA
GGAGATGTTACTCTACTGTTCACACACGATGTCTCTAAGATTCGTCGACC
GTTCGAATTGTGTCGTGGGATAAACGGATGCTGAGTGCGGGGTGACCAGA
GGCCAGAAAAGACGAGGTCGAACATTTTGCACTTATTGAATGTATTATCT
GATTTGCCAAAAAAAACGTAGATGACAAGTAAGTGACGTCATTCGCGGTC
GCGGTTGTGTGGTGTTGTCTTTTCTTTTTCTTTTTTCTTTTTTCTCTGAA
CTTTTTTGAGCGCCCGTTATTGCCCGCGGGTGTCGAGGATCCGAGTGTTT
TTTTGTTAAGTCTTGATGCGTTTGTAATGCTTTAACGAGTTTTATGTCTG
TCAGCCGGCTTCGTCGTTAACTTAGGAGAAGCGAGTTTTTATCAAAGGTT
AAGCGTGGGAACCGTGTAGCTAGCTGGACTGCTGGCGAACTTGGTGCTGT
GGGTCACATATAGTCCCGCGGCGGTACTAATTTGCAGGTTGGGGCTTGTG
TGCATAATGACGTTCATGAATGTGTGTTGGGGGGACGGGGGAGCGGGGGG
GAGGATTACAGAGATGTGTAGGGGTCCCCACCTTGTAGACCTGTGCGTGT
TCCATTCAAGCATTCATGTGTGTGTTGCCACACTGCTATGATGATGCACG
CATTGATCGTTTCGTTGGTTGTGTGTGTTTTTCAACCGACTTGGAAAATA
TTGTGTTTGTTTGGGCAGCTAGCTTGTTGGGTACTTGCTTCATTTACCTC
CCCACGCTGCCCTCTGATTTTGTTTTTTTCATACTACCTGTGGATTTTTT
TTTTGTAATATCAGCTCTTTTTTTTTTAAGCTATCTTGATCGCTGTTCTC
AGTCACTCCTCCATGTATGTTGTACCTGTCATTTGCTGTGCTTATTTTTT
TTTCAACGTTGCGGGTCAGTGTTTCTATCGAACCCTCCGGTCGAAAGCGT
GGAGTGTAATGCCTCGCTTTTTTTCCCTCGTTATCGCGTGGCAGGGGCAG
CAATCTCACTCGCTCGTCAACGTTGAAAAGCATATCTCATGTGCTTAATA
AAAGAGGGGGTAGGGGGGAGTTTTGACGGATGTTGTAGAGGTGACAGTAC
ACATCCAATCTTGAGCGTCTCGTGTCTGTCAAACAGCGATTGACCGCATG
ACGACTGACACGCATGAAGGCCTACTAGGTTGACGGGGAACTCTCATCAG
TCGCACGGTAATTTGTCCCTGGTCCAATACCAACGATATTTGTAGTCTTG
GTATTTTTTCAGGTCTTCTAATGTATTCCAGTGTTGAAAGTGACCCCTTG
CCCCCGCG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3301:5033..17440+ >mRNA_H-paniculata_contig3301.8860.1 ID=mRNA_H-paniculata_contig3301.8860.1|Name=mRNA_H-paniculata_contig3301.8860.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4500bp|location=Sequence derived from alignment at H-paniculata_contig3301:5033..17440+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGATCCCGAGGTGCTGACCATTTTTTTTGCGGCAGCCTACAACGGGGA
CCTGGCTGTGGTAAAGTCTATCGTGAAGGACAAGCGAGTTCCTGTTGACG
CGGTAGACCCTGTTCAGATGGATCCCGAGGTGCTGACCATTTTTTTTGCG
GCAGCCTACAACGGGGACCTGGCTGTGGTAAAGTCTATCGTGAAGGACAA
GCGAGTTCCTGTTGACGCGGTAGACCCTGTTCAGGGCTCCACGGCACTAC
TCTGGGCGTGCTACGGCGGCAGCTTGGAAGTCGCGGAGTGGCTTGTAAAG
GACGCGGGTGCTAAAGTTGGACACAAGAACAAGGGCTCCACGGCACTACT
CTGGGCGTGCTACGGCGGCAGCTTGGAAGTCGCGGAGTGGCTTGTAAAGG
ACGCGGGTGCTAAAGTTGGACACAAGAACAAGGATGATCGTAACGCGTTG
TTTTTCGCGAGTGAGCACTGCCACAAGCCTGTGGCTGCCTTTCTGGTTGG
GAAGGGCGTAGACGTGAACTCTGCCGATGCTTCCTCGGGACACGCACCAC
TGCATCGCGCGTGCATCGCAGGGCAGGTTAGGGACCAGGATGATCGTAAC
GCGTTGTTTTTCGCGAGTGAGCACTGCCACAAGCCTGTGGCTGCCTTTCT
GGTTGGGAAGGGCGTAGACGTGAACTCTGCCGATGCTTCCTCGGGACACG
CACCACTGCATCGCGCGTGCATCGCAGGGCAGGTTAGGGACCAGGCCGGA
GCTGAAGAGATGATCACTTGGCTGCTCACCTCTGCCAGAGCAGACCCTCA
GGTCGCGGACCGCAACGGCCGCAAGCCTGGAGAGGCCGACCTGGCCGTGG
AGGCGCCCACTCTCAAGCCTTCGCGGCGCGCAGACGAGATCCGCAAGATG
CTCCAGGAAGCACGGAGAGGGAAGACTTCAAAAGCTGCAGCCGAAGTGCT
AGCCACGCCTAAGCCGGTGGTGGTTGCTGCTCCGCGAGCAGCGGTGCTGA
CTCCCGCCCCAGCTCCAACTCCAGTGCCAGTTCCGGCTCCAGCTCCAGCT
CCAGCTCCAGCTCCCAATCTAGTGGCAATGCGAGCATCCGCACTCGCGTC
CTCGACTGCCGCTGAGCCTGCCGTGACTGCTCCTGCGCCAACCGCTGCAG
CTGCTCCAGCTGTCGGCGGCGGTTCCAGTGGAATCGCGGCCCGAGCAGCC
GCATTCAGAGCATCATCTGTCCCATCTAAGCCTCCCGCCCCTGCCGCCGC
CGCCCCTGCTTCATCTGGGCGGCCTGTTGCAACTGTGTCTAGTCGCGTGG
CGGAGCGAGCGGCCGCTCTAGCGGCGTCCACGGGGGCTACGGTGACAGCT
TCCGCGGCGGCGGTGGCGGCCCCGCCCTTTGACGCCGAACCCGACACAGC
CCCCGTTTCGTCCACCCCCGCTGTGCCGGCGACCAGTAGCGCGGCCCCTC
CTGACTCGACGGGATCCGGACAACCCTCTTGGGCGAAGCCTCGCGCCGGA
GGCATCTTACCTCGCTCCGGCGGCAGTCTCCCGGTGACAGCCAATGAGGC
GCCGGTGGGATCGCCAGCCCGGAAGACGGCGGCGGCAGCTGCCGCGGTGG
TGTCTACGCCGATGGTGAAACCTATCGCCTACAGCAGGCCTTCAACCAAG
CGACCCACAATTGCCGCTACTAGTACACCGGCTGTTGCTGCTGTTTTGGC
CGCTCCTGCTCCTGCTCCTGCTCCTGCTCCTGCTCCCGCTCCCGCTCCCG
CTCCCGCCCCGACAGCCGTACCCTCAGCCAGGCCGGTGACTTCCGAGCCT
ATCGTGGCATCCACTCCTTTGACGCGTTACCAGCGCTCCGCGTCGGGATC
TGTCAGCAGTGGCCCCACCGCCCCGCGCGCCTTGGCCACTCCCCCCGCCA
AGGGGGCCGCTCACGCCGTGATCGCCGCCTCAAGCGCCCCGAAGGCCTCG
GCTCTCGCGGCTGCTTTCGAAAGTAAGGCCCGCAGCCGCCAGTCTCAGCC
CCCGCCGCGGCGAGGGGACTCCGGGCTGTCTGGGGCGGCGCGGGCGGCAC
GGGCGCCCGCACTGTCCAGTTCTACTTCGGGGAGTACGGGTAGGAGCGGT
CCTAGTTCCCAAAACGGGCGCCCTGCTAGATCCAGCGATGTCCCGTCAAA
CTGTCAGCCCGCCCCGTCGGTGGGGCCGCGCCTGACGACCACCATCTCCG
AGAGCAGTAGCAGCGGGAGTTCCGGCAATGGGCGTTCGGCTAGTGCTAGT
AGTGTGCCACGTGTGACGCCGCAGGAGCTGTTGGGCACGGGCAGCGTGAT
GAAGAAGAAGCAGGCCGGAGCTGAAGAGATGATCACTTGGCTGCTCACCT
CTGCCAGAGCAGACCCTCAGGTCGCGGACCGCAACGGCCGCAAGCCTGGA
GAGGCCGACCTGGCCGTGGAGGCGCCCACTCTCAAGCCTTCGCGGCGCGC
AGACGAGATCCGCAAGATGCTCCAGGAAGCACGGAGAGGGAAGACTTCAA
AAGCTGCAGCCGAAGTGCTAGCCACGCCTAAGCCGGTGGTGGTTGCTGCT
CCGCGAGCAGCGGTGCTGACTCCCGCCCCAGCTCCAACTCCAGTGCCAGT
TCCGGCTCCAGCTCCAGCTCCAGCTCCAGCTCCCAATCTAGTGGCAATGC
GAGCATCCGCACTCGCGTCCTCGACTGCCGCTGAGCCTGCCGTGACTGCT
CCTGCGCCAACCGCTGCAGCTGCTCCAGCTGTCGGCGGCGGTTCCAGTGG
AATCGCGGCCCGAGCAGCCGCATTCAGAGCATCATCTGTCCCATCTAAGC
CTCCCGCCCCTGCCGCCGCCGCCCCTGCTTCATCTGGGCGGCCTGTTGCA
ACTGTGTCTAGTCGCGTGGCGGAGCGAGCGGCCGCTCTAGCGGCGTCCAC
GGGGGCTACGGTGACAGCTTCCGCGGCGGCGGTGGCGGCCCCGCCCTTTG
ACGCCGAACCCGACACAGCCCCCGTTTCGTCCACCCCCGCTGTGCCGGCG
ACCAGTAGCGCGGCCCCTCCTGACTCGACGGGATCCGGACAACCCTCTTG
GGCGAAGCCTCGCGCCGGAGGCATCTTACCTCGCTCCGGCGGCAGTCTCC
CGGTGACAGCCAATGAGGCGCCGGTGGGATCGCCAGCCCGGAAGACGGCG
GCGGCAGCTGCCGCGGTGGTGTCTACGCCGATGGTGAAACCTATCGCCTA
CAGCAGGCCTTCAACCAAGCGACCCACAATTGCCGCTACTAGTACACCGG
CTGTTGCTGCTGTTTTGGCCGCTCCTGCTCCTGCTCCTGCTCCTGCTCCT
GCTCCCGCTCCCGCTCCCGCTCCCGCCCCGACAGCCGTACCCTCAGCCAG
GCCGGTGACTTCCGAGCCTATCGTGGCATCCACTCCTTTGACGCGTTACC
AGCGCTCCGCGTCGGGATCTGTCAGCAGTGGCCCCACCGCCCCGCGCGCC
TTGGCCACTCCCCCCGCCAAGGGGGCCGCTCACGCCGTGATCGCCGCCTC
AAGCGCCCCGAAGGCCTCGGCTCTCGCGGCTGCTTTCGAAAGTAAGGCCC
GCAGCCGCCAGTCTCAGCCCCCGCCGCGGCGAGGGGACTCCGGGCTGTCT
GGGGCGGCGCGGGCGGCACGGGCGCCCGCACTGTCCAGTTCTACTTCGGG
GAGTACGGGTAGGAGCGGTCCTAGTTCCCAAAACGGGCGCCCTGCTAGAT
CCAGCGATGTCCCGTCAAACTGTCAGCCCGCCCCGTCGGTGGGGCCGCGC
CTGACGACCACCATCTCCGAGAGCAGTAGCAGCGGGAGTTCCGGCAATGG
GCGTTCGGCTAGTGCTAGTAGTGTGCCACGTGTGACGCCGCAGGAGCTGT
TGGGCACGGGCAGCGTGATGAAGAAGAAGCAGGTGTACCAGGCCGCTGCC
CAAAAGACGAGCACCTCGACACGGAATGGAAGTCCTAGGGGCGCTCCCGG
TACTATGTTGTCTAAAGGGAAGAAGAAGGTGTACCAGGCCGCTGCCCAAA
AGACGAGCACCTCGACACGGAATGGAAGTCCTAGGGGCGCTCCCGGTACT
ATGTTGTCTAAAGGGAAGAAGAAGGAATCGAGCTTCATGGACAAGTTCGT
GCAGATGTTCTCTATTTCGCCGCAGTCGTCTCGAGAGTCGTCGCCGGCCA
GGAATCGAGCTTCATGGACAAGTTCGTGCAGATGTTCTCTATTTCGCCGC
AGTCGTCTCGAGAGTCGTCGCCGGCCAGATCACCCCCTCGCAAGTCACCC
GCGCGTGGTTTGTCTAAAAGCCCGCACCGCACGAACGGAGCCACTCAGCA
CACGGAAGAGCAAGGAAGGTTGGGCTTCTTCAATTCCAACGTGTCGTTCA
AAGAGAAGGAGTGAATCACCCCCTCGCAAGTCACCCGCGCGTGGTTTGTC
TAAAAGCCCGCACCGCACGAACGGAGCCACTCAGCACACGGAAGAGCAAG
GAAGGTTGGGCTTCTTCAATTCCAACGTGTCGTTCAAAGAGAAGGAGTGA back to top
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