mRNA_H-paniculata_contig3301.8859.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3301.8859.1
Unique NamemRNA_H-paniculata_contig3301.8859.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A6H5JYN6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JYN6_9PHAE)

HSP 1 Score: 531 bits (1368), Expect = 6.020e-188
Identity = 261/279 (93.55%), Postives = 272/279 (97.49%), Query Frame = 1
Query:   16 TMSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            TMSHRKFEAPRNGSLGFLPKKRTKKH GHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPP+VVVGVVGYVETP+GLRTLTTVWAGHLSDECKRRFYKHWY SKKKAFTRYAKKFA+APQEIDAEL RIK+Y QVVRVIAHTQ+ LV+LRQK A+ICE+QVNGGD+ AKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGV+TRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTE+
Sbjct:   30 TMSHRKFEAPRNGSLGFLPKKRTKKHRGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPIVVVGVVGYVETPKGLRTLTTVWAGHLSDECKRRFYKHWYTSKKKAFTRYAKKFADAPQEIDAELGRIKQYAQVVRVIAHTQIGLVKLRQKKAHICEIQVNGGDVAAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEL 308          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A835YUS8_9STRA (Ribosomal protein L3 superfamily protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YUS8_9STRA)

HSP 1 Score: 474 bits (1221), Expect = 5.000e-166
Identity = 233/278 (83.81%), Postives = 256/278 (92.09%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            MSHRKFEAPR GSLGFLPKKRTKKH G IRSFP+DDA+K   LTAFMAYKAGMTH+ REV+RPGSK+HKKE VEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWA HLSDE +RRFYK+WYKSKKKAFTRYAKK AE+P E++ ELERIKKYCQVVRVIAHTQV LV+LR K A++ E+QVNGG +  KV FARGLFE++VPVD+VFAKDECID+LGA+KGHGTEGV+TRWGVTRL RKTHRGLRKVACIG+WHPARVSFSVARAGQHGYHHRTE+
Sbjct:    1 MSHRKFEAPRRGSLGFLPKKRTKKHFGKIRSFPRDDASKPCQLTAFMAYKAGMTHVVREVERPGSKLHKKETVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAEHLSDEIRRRFYKNWYKSKKKAFTRYAKKCAESPAEVEKELERIKKYCQVVRVIAHTQVGLVKLRVKKAHVMEIQVNGGSVADKVAFARGLFEKQVPVDSVFAKDECIDILGATKGHGTEGVVTRWGVTRLARKTHRGLRKVACIGSWHPARVSFSVARAGQHGYHHRTEI 278          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A7S2V865_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2V865_9STRA)

HSP 1 Score: 461 bits (1187), Expect = 6.910e-161
Identity = 219/278 (78.78%), Postives = 254/278 (91.37%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            MSHRKFEAPR+GSLGFLPKKRTK HHG IR+FPKDDA+K PHLTAFMAYKAGMTHI REV+RPGSK+HKKEVVEAVTI+E PPM+VVG+VGYVETPRGLR+LTTVWA HLS+ECKRRFYK+WYKSK+KAFT+YAKK+ ++P ++D EL+R+KKYCQV+RVIAHTQ+  V+LRQK A+I E+QVNGG +  KVDF + LFE++V VD+VFA+DE ID +GASKGHGTEGV+TRWGVTRLPRKTHRGLRKVACIG WHPARV ++VAR GQHGYHHRTEV
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKHHHGRIRTFPKDDASKPPHLTAFMAYKAGMTHIVREVERPGSKLHKKEVVEAVTIMEAPPMMVVGLVGYVETPRGLRSLTTVWAEHLSEECKRRFYKNWYKSKRKAFTKYAKKYTDSPADLDFELKRMKKYCQVIRVIAHTQIRKVKLRQKKAHIMEIQVNGGSVEDKVDFGKNLFEKEVSVDSVFAQDEVIDTIGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGPWHPARVPYTVARTGQHGYHHRTEV 278          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: H6WB96_VAULI (Ribosomal protein L3 superfamily protein n=1 Tax=Vaucheria litorea TaxID=109269 RepID=H6WB96_VAULI)

HSP 1 Score: 452 bits (1163), Expect = 3.800e-157
Identity = 219/278 (78.78%), Postives = 249/278 (89.57%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            MSHRKFEAPR GSLGFLPKKRTKKH G IRSFP DD +KE HLTAFMAYKAGMTHI REV+RPGSK+HKKE VE VTILE PPMVVVGVVGY ETP GL+T+ +VWAGHLSDEC+RR YK+W+ SKKKAFT YAKKFAE P+EI+ +L++IKK+CQVVRVIAHTQV LV+LR K A+I E+QVNGG +  KVDFA+GLFE+ VP+ +VF+KDECIDVLGA+KGHGT+GV+ RWGVTRL RKTHRGLRKVACIG+WHPARV+FSVARAGQHGYHHRTE+
Sbjct:    1 MSHRKFEAPRKGSLGFLPKKRTKKHFGKIRSFPHDDPSKECHLTAFMAYKAGMTHIVREVERPGSKLHKKETVEPVTILECPPMVVVGVVGYKETPNGLKTVVSVWAGHLSDECRRRMYKNWHSSKKKAFTAYAKKFAEKPEEIERDLKKIKKHCQVVRVIAHTQVGLVKLRVKKAHIMEIQVNGGTVEEKVDFAKGLFERHVPISSVFSKDECIDVLGATKGHGTKGVVARWGVTRLARKTHRGLRKVACIGSWHPARVAFSVARAGQHGYHHRTEI 278          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A7S3Y2B0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y2B0_HETAK)

HSP 1 Score: 447 bits (1151), Expect = 1.850e-155
Identity = 222/279 (79.57%), Postives = 247/279 (88.53%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQ-EIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            MSHRKFEAPR+GSLGFLPKKRTKKH G IRSFP+DDA+K  HLTAFMAYKAGMTHI RE+D+PGSK +KKEVVEAVT+LE PPMV VGVVGYVETP GLRTLTTVWA HL +  KRRFYK+WYKSKKKAFT+YAKK+ E    +I AEL RIKKYCQVVRVIAHTQ   + LR K A+I E+QVNGG +  KVDFA+ LFE+++ VD+VFAKDECIDVLGASKGHGTEGV+TRWGVTRLPRKTHRGLRKVACIGAWHP+RVSFSVAR+GQHGYHHRTE+
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKKHRGKIRSFPRDDASKPTHLTAFMAYKAGMTHIVREMDKPGSKYNKKEVVEAVTVLEAPPMVAVGVVGYVETPSGLRTLTTVWANHLDEAVKRRFYKNWYKSKKKAFTKYAKKYYEGGSGDIAAELARIKKYCQVVRVIAHTQPKKLNLRLKKAHIMEIQVNGGSVSDKVDFAQNLFEKQIEVDSVFAKDECIDVLGASKGHGTEGVVTRWGVTRLPRKTHRGLRKVACIGAWHPSRVSFSVARSGQHGYHHRTEM 279          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: H3G9A1_PHYRM (Uncharacterized protein n=29 Tax=Oomycota TaxID=4762 RepID=H3G9A1_PHYRM)

HSP 1 Score: 448 bits (1152), Expect = 2.050e-155
Identity = 217/278 (78.06%), Postives = 247/278 (88.85%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            M HRKFEAPR+G LGFLPKKRTK H G +R FP+DDA+K PHLTAFM +KAGMTHI REVDRPGSKVHKKE+VE V+I+ETPPMVVVGVVGY+ETPRGLRTLTTV+A HLS+E KRRFYK+WYKSK+KAFT+YAKK+  AP +I+ EL RIKKYCQVVRV+AHTQV  V+LRQK A++ EVQVNGG +  KVDFA+ LFE++VPV AVFAKDE IDV+G +KGHG EGVITRWGVTRLPRKTHRGLRKVACIGAWHP+RV F+V RAGQHGYHHRTE+
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGFKAGMTHIVREVDRPGSKVHKKEIVEPVSIVETPPMVVVGVVGYLETPRGLRTLTTVFAEHLSEEIKRRFYKNWYKSKRKAFTKYAKKYQTAPADIENELNRIKKYCQVVRVLAHTQVRKVKLRQKKAHLLEVQVNGGSVADKVDFAKSLFEKQVPVTAVFAKDEMIDVIGVTKGHGIEGVITRWGVTRLPRKTHRGLRKVACIGAWHPSRVRFTVPRAGQHGYHHRTEI 278          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A8K1FED4_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FED4_PYTOL)

HSP 1 Score: 447 bits (1151), Expect = 2.060e-155
Identity = 217/278 (78.06%), Postives = 246/278 (88.49%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            M HRKFEAPR+G LGFLPKKRTK H G +R FP+DDA+K PHLTAFM YKAGMTHI REVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGY+ETPRGLRTLTTV+A HL++E KRRFYK+WY+SK+KAFT+Y+KK+   P EI+ EL RIKKYCQVVRV+ HTQ+  V LRQK A++ EVQVNGG +  KVDFA+ LFE++VPV AVFA+DE IDV+G +KGHG EGVITRWGV+RLPRKTHRGLRKVACIGAWHP+RV FSVARAGQHGYHHRTE+
Sbjct:    1 MGHRKFEAPRHGHLGFLPKKRTKHHRGRVRKFPRDDASKAPHLTAFMGYKAGMTHIVREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYLETPRGLRTLTTVFAEHLNEEVKRRFYKNWYRSKRKAFTKYSKKYQTNPAEIENELNRIKKYCQVVRVLTHTQIRKVNLRQKKAHLIEVQVNGGSVAEKVDFAKSLFEKQVPVSAVFAQDEMIDVIGVTKGHGFEGVITRWGVSRLPRKTHRGLRKVACIGAWHPSRVRFSVARAGQHGYHHRTEI 278          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A7S2SCP9_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SCP9_9STRA)

HSP 1 Score: 446 bits (1147), Expect = 1.100e-154
Identity = 217/283 (76.68%), Postives = 248/283 (87.63%), Query Frame = 1
Query:    4 VSQVTMSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            V  +TMSHRKFEAPR+GSLGFLPKKRTK H G +RSFPKDDA K  HLTAFMAYKAGMTH+ RE +RPGSKVH KEVV+AVTILETPPMVVVGVVGYV T  GLRTLTT WAGHLSDE +RRFYK+WYKSK+KAF++Y K+F E+P E +A+L+R+K  CQV+RVIAHTQ+  + LRQK A+I E+QVNGG I  KVDFA GLFE++V V+ VFAKDE IDVLGA+KGHGTEGVI RWG+TRLPRKTHRGLRKVACIGAWHP+RV+FSVAR+GQHGYHHRTE+
Sbjct:    5 VHSLTMSHRKFEAPRHGSLGFLPKKRTKHHRGRVRSFPKDDATKPCHLTAFMAYKAGMTHVVREPERPGSKVHHKEVVDAVTILETPPMVVVGVVGYVATATGLRTLTTAWAGHLSDEVRRRFYKNWYKSKQKAFSKYTKQFKESPAETEAQLQRMKDQCQVIRVIAHTQIAKIGLRQKKAHIMEIQVNGGSIADKVDFAHGLFEKQVTVEDVFAKDENIDVLGATKGHGTEGVIARWGITRLPRKTHRGLRKVACIGAWHPSRVAFSVARSGQHGYHHRTEM 287          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A7S2FZZ7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2FZZ7_9STRA)

HSP 1 Score: 437 bits (1123), Expect = 1.020e-151
Identity = 211/278 (75.90%), Postives = 245/278 (88.13%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            MSHRKFEAPR+GSLGFLPKKRTK H G +RSFPKDDA++ PHLTAFM YKAGMTH+ REV+RPGSK H KE+V+AVTI+ETPPMVVVG+VGYV T +GLRTL TVW  HL+ E KRRFYK+WY SK+KAFT+Y KK+ +APQ+I+AE+ER+K  CQV+RVIAHTQ+  + LRQK A++ EVQ+NGG    KVDF R LFE++V VD+VFAKDE IDVLGA+KGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVAR+GQ+GYHHRTE+
Sbjct:    1 MSHRKFEAPRHGSLGFLPKKRTKHHRGRVRSFPKDDASEAPHLTAFMGYKAGMTHVVREVERPGSKTHHKEIVDAVTIIETPPMVVVGLVGYVRTAQGLRTLNTVWTQHLNKEVKRRFYKNWYASKQKAFTKYTKKYIDAPQDIEAEIERMKSDCQVIRVIAHTQIGKIGLRQKKAHMMEVQINGGSSADKVDFGRNLFEKEVSVDSVFAKDENIDVLGATKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARSGQNGYHHRTEM 278          
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Match: A0A7S4AYI8_CHRCT (Hypothetical protein n=1 Tax=Chrysotila carterae TaxID=13221 RepID=A0A7S4AYI8_CHRCT)

HSP 1 Score: 434 bits (1116), Expect = 4.300e-150
Identity = 202/278 (72.66%), Postives = 246/278 (88.49%), Query Frame = 1
Query:   19 MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYKAGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLRTLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELERIKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFEQKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVACIGAWHPARVSFSVARAGQHGYHHRTEV 852
            MSHRKFE PR+GSLGFLPKKR  +H G ++SFPKDD +K PHLTAF+AYKAGMTHI R+VD+PGSK HKKEVVEAV++LETPPM VVG+VGYV+T  G+R LTTVWA HL+DE KRRFYK+WYK KKKAFT+Y KK+A+  ++IDAE+E+IKKYCQVVRV++HTQ+  ++L QK A++ E+Q+NGGD+ AKVDFA  LFE++VPVD VFA++E +DV+G +KGHG EGV++RWGVTRLPRKTHRGLRKVACIGAWHPA+V +SVARAGQHGYHHRTE+
Sbjct:    1 MSHRKFERPRHGSLGFLPKKRASRHRGKVKSFPKDDPSKPPHLTAFLAYKAGMTHITRDVDKPGSKAHKKEVVEAVSVLETPPMRVVGIVGYVQTSNGIRALTTVWAEHLNDELKRRFYKNWYKCKKKAFTKYVKKYADGQKDIDAEVEKIKKYCQVVRVLSHTQIRKLKLGQKKAHLMEIQINGGDVAAKVDFALNLFEKEVPVDGVFAQNEMLDVIGVTKGHGYEGVVSRWGVTRLPRKTHRGLRKVACIGAWHPAKVQYSVARAGQHGYHHRTEM 278          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3301.8859.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JYN6_9PHAE6.020e-18893.55Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2... [more]
A0A835YUS8_9STRA5.000e-16683.81Ribosomal protein L3 superfamily protein n=1 Tax=T... [more]
A0A7S2V865_9STRA6.910e-16178.78Hypothetical protein n=1 Tax=Fibrocapsa japonica T... [more]
H6WB96_VAULI3.800e-15778.78Ribosomal protein L3 superfamily protein n=1 Tax=V... [more]
A0A7S3Y2B0_HETAK1.850e-15579.57Hypothetical protein n=1 Tax=Heterosigma akashiwo ... [more]
H3G9A1_PHYRM2.050e-15578.06Uncharacterized protein n=29 Tax=Oomycota TaxID=47... [more]
A0A8K1FED4_PYTOL2.060e-15578.06Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A7S2SCP9_9STRA1.100e-15476.68Hypothetical protein n=1 Tax=Rhizochromulina marin... [more]
A0A7S2FZZ7_9STRA1.020e-15175.90Hypothetical protein (Fragment) n=1 Tax=Florenciel... [more]
A0A7S4AYI8_CHRCT4.300e-15072.66Hypothetical protein n=1 Tax=Chrysotila carterae T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3301contigH-paniculata_contig3301:1280..3998 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score529.3
Seed ortholog evalue1.1e-147
Seed eggNOG ortholog2880.D7FHR5
Preferred nameRPL3
KEGG koko:K02925
KEGG Pathwayko03010,map03010
KEGG ModuleM00177
Hectar predicted targeting categoryother localisation
EggNOG free text desc.ribosomal large subunit assembly
EggNOG OGsCOG0087@1,KOG0746@2759
COG Functional cat.J
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEbr01610,ko00000,ko00001,ko00002,ko03011
Exons5
Model size858
Cds size840
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3301.8859.1prot_H-paniculata_contig3301.8859.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3301 1280..3980 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930020.8781857-CDS-H-paniculata_contig3301:1279..14861622930020.8781857-CDS-H-paniculata_contig3301:1279..1486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 1280..1486 -
1691481113.3700175-CDS-H-paniculata_contig3301:1279..14861691481113.3700175-CDS-H-paniculata_contig3301:1279..1486Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 1280..1486 -
1622930020.8930516-CDS-H-paniculata_contig3301:2174..23071622930020.8930516-CDS-H-paniculata_contig3301:2174..2307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 2175..2307 -
1691481113.3800883-CDS-H-paniculata_contig3301:2174..23071691481113.3800883-CDS-H-paniculata_contig3301:2174..2307Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 2175..2307 -
1622930020.9073145-CDS-H-paniculata_contig3301:2465..26151622930020.9073145-CDS-H-paniculata_contig3301:2465..2615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 2466..2615 -
1691481113.3923583-CDS-H-paniculata_contig3301:2465..26151691481113.3923583-CDS-H-paniculata_contig3301:2465..2615Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 2466..2615 -
1622930020.9220426-CDS-H-paniculata_contig3301:3266..34661622930020.9220426-CDS-H-paniculata_contig3301:3266..3466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 3267..3466 -
1691481113.4036062-CDS-H-paniculata_contig3301:3266..34661691481113.4036062-CDS-H-paniculata_contig3301:3266..3466Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 3267..3466 -
1622930020.9455864-CDS-H-paniculata_contig3301:3830..39801622930020.9455864-CDS-H-paniculata_contig3301:3830..3980Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 3831..3980 -
1691481113.4117513-CDS-H-paniculata_contig3301:3830..39801691481113.4117513-CDS-H-paniculata_contig3301:3830..3980Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3301 3831..3980 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930020.9650095-UTR-H-paniculata_contig3301:3980..39981622930020.9650095-UTR-H-paniculata_contig3301:3980..3998Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3301 3981..3998 -
1691481113.4275913-UTR-H-paniculata_contig3301:3980..39981691481113.4275913-UTR-H-paniculata_contig3301:3980..3998Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3301 3981..3998 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3301.8859.1

>prot_H-paniculata_contig3301.8859.1 ID=prot_H-paniculata_contig3301.8859.1|Name=mRNA_H-paniculata_contig3301.8859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=280bp
MSHRKFEAPRNGSLGFLPKKRTKKHHGHIRSFPKDDAAKEPHLTAFMAYK
AGMTHIAREVDRPGSKVHKKEVVEAVTILETPPMVVVGVVGYVETPRGLR
TLTTVWAGHLSDECKRRFYKHWYKSKKKAFTRYAKKFAEAPQEIDAELER
IKKYCQVVRVIAHTQVILVRLRQKAANICEVQVNGGDIGAKVDFARGLFE
QKVPVDAVFAKDECIDVLGASKGHGTEGVITRWGVTRLPRKTHRGLRKVA
CIGAWHPARVSFSVARAGQHGYHHRTEVR*
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mRNA from alignment at H-paniculata_contig3301:1280..3998-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3301.8859.1 ID=mRNA_H-paniculata_contig3301.8859.1|Name=mRNA_H-paniculata_contig3301.8859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2719bp|location=Sequence derived from alignment at H-paniculata_contig3301:1280..3998- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ACCGTCTCACAGGTCACCATGTCTCACCGTAAATTCGAGGCACCTCGTAA CGGATCCCTTGGGTTCCTGCCCAAGAAGCGTACGAAGAAGCACCACGGGC ACATCCGTTCTTTCCCCAAGGACGATGCCGCCAAGGAGCCCCACCTGACG GCCTTCATGGCCTACAAGGTAAATTTCATCTAAGCGCTAACAACGAGGTT GTTTTCTGCACCCGGTAATATACCATTTTTAAACGTGTGCCCAGAGGTCC TCGCGTGACTCCGGATCAATACAGAGCAGTCGAGGAGTGCTGTCACCTAA GCCCCGTTTACTGTGGAAAAGTCTGTCATGTGTTTCAACTCGACTGTAGA TCACCGCTCGAGTACGACCCAAGAATGCTGGGAATCATGTAATATTACAG TTTTCCTCATAATGCGAGACATGTGCGTACTGGGACCAAGAATTCTCCTC GTGAGACATCGAAGTCTGTAACTAAAGCGTGAAAAATATTTGAGAGTTCA TTCGGGAAGCCCTTACCCGAACCTGCGTCCAGGCTGGCATGACCCACATC GCCCGCGAAGTGGACCGCCCTGGATCCAAGGTTCACAAAAAAGAAGTGGT GGAGGCGGTGACCATCCTCGAAACGCCTCCGATGGTGGTTGTGGGTGTCG TGGGCTACGTCGAGACCCCCAGGGGTCTTCGCACCCTCACTACCGTCTGG GCCGGGCACTTGTCTGATGAGTGCAAGAGGAGGTGAGCACAGATGAGACT AATCGCCACGAACGGCGTGGTAGTGTATCTTAGCGCAACACGTTGCAACA TCATGGCACTCTCTGGTTTGAAGCATTTTACAGAATATTGATGTAATTGA TATGGCTGTCACGTTCATGAGCAATCCACAAACTGAGATGGTGATACTGT GGACGTGAAGCCCTTGTGTCATGTTTGCCGGGTAGTACTACGGAATTTGG TGCTGGACAAAATTAGTGGAAAATGAAGTAAAATTGGGCAGATTTTGAAA AATCATGAAAAAGCCCCGAACAAGCACTTGAACGCTTCAGGCTTGTGGTT TATTTACACTGGAACGTACAGGCAGTTCACGGAGCGGTGCTTCTTGACTA GTGGGAGTTTCGCTTTTCGTTCTGTGGGCGCTCCCGGGTGCTCACTTTTT TGCTGCCTACATGAAATGTTAACACCAGCCCTTCACACTCACCAGGCCGG AGTTGTTCTTTGATGTGCTTGGCCTACACTGCTGGACATTATTGTTTTAT TTTGTGTAGAGTATTTATCCACGGTGGCGAGTTAGTTTCATGATCCAATG TAATGGATTCATGGTTTGATCGGGTAGTGTCGTGTAAGCACCTGCTGTGA AGATTCCCAACTCGTTTCATTTACTTACTGCAGGTTCTACAAGCACTGGT ACAAGTCGAAGAAGAAGGCCTTCACCAGGTATGCGAAGAAGTTCGCGGAG GCTCCCCAGGAGATCGATGCTGAACTAGAGCGTATCAAGAAGTACTGCCA GGTCGTGCGCGTCATCGCCCACACTCAGGTGATGTGCCAAGTGAATGACC GGAAAGGGCGCGCGAAAACCTCGCAGTGAAATGATCGTGACATGTATCAA ATCGATTTCATCTGATGCGATAGCTGGCTCTAGGATGCAAAAAAGGTAAG GCTTAAAGTATTGCGCTCCTTCACTCTCGTCACCAGGTGAGCCTTGTAAG GCTAAGGCAGAAGGCCGCCAACATATGCGAAGTTCAGGTCAACGGTGGCG ACATCGGTGCCAAGGTGGATTTCGCACGCGGTCTTTTCGAGCAGAAGGTA CCAGTGGACGCCGTCTTCGCAAAGGTGAGTGTGCTTCGCGAAGTATGGCC TGGTAGTCTGAGAGTGAAGAAACATATCACGTCTTGTTTCGGGTATATTA CCATAAGCAACGTCACAGATACATCATCCGTTTGCCAATGTATGTACAAA ATGATATGTGAGGCGAAGTTTTGAACGATGGTTGTTCAAATGCGAAATAT TCACATCAACTTCATGGCGCCACTAATATTTTCAAATAAAACCACCAGTT CTCGTGTAGTCAAGTGATTTTTTGTTGATTCGAGTCAGTTGGCGGTCAAT TTTGAGGAATTTCCCTTCTACACCCGGTTCGCAATGTCTTGTGACTGTAG ACACGCATTCTCGTAAGACGTTGGTTCTTTCACCTAACAGCTTCATCCCT TTTTCCTTTCAACACCCTAAACTCTTCCCAAAGAATATATTAACATTTTG AAATACAGCCCGCTATGGGTATCGGTGGTTCTTTATCCTTGACCTCACTA TGTGAGGCACTACGGGTAAAGGGTTCTAGGTTTGTCGACGATGAATGTAG GTAGACCGTCATTCATGGTTCGACAAGTAACCAGAAGCTAAGAAATTCCT GGAGGATCATGTCGCCTTACTTATCAGTATGTGGTGAAGTCCCAAGTAAT GGAAATGAATTTTCCTAACTTTCCTGCACGTTCTCTATTATATGGGTAAA TCCTCATGTTAGGACGAGTGTATTGATGTGCTCGGCGCCTCGAAGGGTCA CGGGACGGAGGGTGTGATCACTCGGTGGGGTGTGACGCGTCTTCCTCGTA AGACTCACCGTGGTCTTCGCAAGGTGGCGTGCATCGGTGCGTGGCACCCT GCCCGCGTGAGCTTCTCGGTCGCCCGCGCTGGTCAACACGGGTACCACCA CCGTACGGAGGTGAGATGA
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Coding sequence (CDS) from alignment at H-paniculata_contig3301:1280..3998-

>mRNA_H-paniculata_contig3301.8859.1 ID=mRNA_H-paniculata_contig3301.8859.1|Name=mRNA_H-paniculata_contig3301.8859.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1680bp|location=Sequence derived from alignment at H-paniculata_contig3301:1280..3998- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCTCACCGTAAATTCGAGGCACCTCGTAACGGATCCCTTGGGTTCCT
GCCCAAGAAGCGTACGAAGAAGCACCACGGGCACATCCGTTCTTTCCCCA
AGGACGATGCCGCCAAGGAGCCCCACCTGACGGCCTTCATGGCCTACAAG
ATGTCTCACCGTAAATTCGAGGCACCTCGTAACGGATCCCTTGGGTTCCT
GCCCAAGAAGCGTACGAAGAAGCACCACGGGCACATCCGTTCTTTCCCCA
AGGACGATGCCGCCAAGGAGCCCCACCTGACGGCCTTCATGGCCTACAAG
GCTGGCATGACCCACATCGCCCGCGAAGTGGACCGCCCTGGATCCAAGGT
TCACAAAAAAGAAGTGGTGGAGGCGGTGACCATCCTCGAAACGCCTCCGA
TGGTGGTTGTGGGTGTCGTGGGCTACGTCGAGACCCCCAGGGGTCTTCGC
ACCCTCACTACCGTCTGGGCCGGGCACTTGTCTGATGAGTGCAAGAGGAG
GCTGGCATGACCCACATCGCCCGCGAAGTGGACCGCCCTGGATCCAAGGT
TCACAAAAAAGAAGTGGTGGAGGCGGTGACCATCCTCGAAACGCCTCCGA
TGGTGGTTGTGGGTGTCGTGGGCTACGTCGAGACCCCCAGGGGTCTTCGC
ACCCTCACTACCGTCTGGGCCGGGCACTTGTCTGATGAGTGCAAGAGGAG
GTTCTACAAGCACTGGTACAAGTCGAAGAAGAAGGCCTTCACCAGGTATG
CGAAGAAGTTCGCGGAGGCTCCCCAGGAGATCGATGCTGAACTAGAGCGT
ATCAAGAAGTACTGCCAGGTCGTGCGCGTCATCGCCCACACTCAGGTGAT
GTTCTACAAGCACTGGTACAAGTCGAAGAAGAAGGCCTTCACCAGGTATG
CGAAGAAGTTCGCGGAGGCTCCCCAGGAGATCGATGCTGAACTAGAGCGT
ATCAAGAAGTACTGCCAGGTCGTGCGCGTCATCGCCCACACTCAGGTGAT
CCTTGTAAGGCTAAGGCAGAAGGCCGCCAACATATGCGAAGTTCAGGTCA
ACGGTGGCGACATCGGTGCCAAGGTGGATTTCGCACGCGGTCTTTTCGAG
CAGAAGGTACCAGTGGACGCCGTCTTCGCAAAGCCTTGTAAGGCTAAGGC
AGAAGGCCGCCAACATATGCGAAGTTCAGGTCAACGGTGGCGACATCGGT
GCCAAGGTGGATTTCGCACGCGGTCTTTTCGAGCAGAAGGTACCAGTGGA
CGCCGTCTTCGCAAAGGACGAGTGTATTGATGTGCTCGGCGCCTCGAAGG
GTCACGGGACGGAGGGTGTGATCACTCGGTGGGGTGTGACGCGTCTTCCT
CGTAAGACTCACCGTGGTCTTCGCAAGGTGGCGTGCATCGGTGCGTGGCA
CCCTGCCCGCGTGAGCTTCTCGGTCGCCCGCGCTGGTCAACACGGGTACC
ACCACCGTACGGAGGTGAGATGAGACGAGTGTATTGATGTGCTCGGCGCC
TCGAAGGGTCACGGGACGGAGGGTGTGATCACTCGGTGGGGTGTGACGCG
TCTTCCTCGTAAGACTCACCGTGGTCTTCGCAAGGTGGCGTGCATCGGTG
CGTGGCACCCTGCCCGCGTGAGCTTCTCGGTCGCCCGCGCTGGTCAACAC
GGGTACCACCACCGTACGGAGGTGAGATGA
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