mRNA_H-paniculata_contig330.8853.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: D8LK46_ECTSI (Pleckstrin homology (PH) domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LK46_ECTSI) HSP 1 Score: 533 bits (1373), Expect = 2.170e-158 Identity = 321/663 (48.42%), Postives = 394/663 (59.43%), Query Frame = 3
Query: 6033 LQKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVKTMDGHVPKHVKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAPLDLSVTSGSLAGSTIDRSYSKPLSATPATSSAAAMPFGTPSESGRRLSKLSNLANRKRRTSLESSLGNKMHPPMIRGWARTKSETQQTWRRRYVALFRSADGSVAKDAIYFFGDPAMCDKMVGQSLHASHSCLPLGDVYGVR---QETSDMDHAIALQTNGKSENSKEHVIVPEEQSDFSSWLGFINEYCSNQAQHMVMADNTPFSSIGGETTFLSNATIEEHEQDVPA-VGREANSSEAAL--IGL 8003
++KI + GVNKFNVNPKDG+ +L++ +TD+ +GIC FL GLSKRRLGEYFGRDNP +Q+VL LFLK L+F N +LDEALRAMV++FR+PGEAQQ+D IME F+ RYHEENP VFSCS TA++LAF LMMLNTDMYNRN+K S++ + +FV N+RGID+G D +E LE MY+R++ S EIRM EGDM+ESEVITFVAPKKSGWL KK GYV KW R+WFVL DAVLYYFLAPQHQDEAPRCIIPLE +NI P+G+TDL+I L+ T G V KSVKM NG M++ HRSF RA+T + RD WV ALR EVP ++LS S+ LSATPATS P GTPSESGRR K S +RR +++ +KM PP+IRGWART+S+ Q+ RRY+ALFR + IYFFGD AMCDKM+ Q L SH L L DV V+ +E AIALQT G ++ KE VIVPEEQ +F +W I E C A + + AD TP +S+G T F S T++ + V + V NS+ A IGL
Sbjct: 411 VRKIMERGVNKFNVNPKDGIAYLIDNGLVTDSAQGICSFLCSAEGLSKRRLGEYFGRDNPKAQEVLRLFLKELKFKNASLDEALRAMVMRFRLPGEAQQMDR------------------------IMESFAVRYHEENPYVFSCSDTAWVLAFGLMMLNTDMYNRNIKESDKMTEAEFVKNHRGIDQGKDPAKELLEGMYRRIKAS------------------------------------------------------------------EIRMAEGDMYESEVITFVAPKKSGWLKKKSTGYVGKWKRHWFVLNDAVLYYFLAPQHQDEAPRCIIPLEGINISPIGATDLSIGLR---TNQGFV----KSVKMADNGTMQQGTHRSFTLRADTNSERDIWVDALRAEVPAFHMELSA--------------SRSLSATPATSXXX-XPIGTPSESGRRSGKFSASGRTRRRATIDLEASSKMQPPVIRGWARTQSDQHQSGGRRYIALFRDIGPDQQDNVIYFFGDAAMCDKMIEQHLRTSHGSLNLSDVTRVQLQQEEGGGGGRAIALQT-GAGKHVKEVVIVPEEQREFLAWTRNIKECCPGSA-YSIAADCTPSASVGA-TAFPSVNTVDSNGDGVASSVSVSVNSAIAIADHIGL 958
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A835YWD7_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YWD7_9STRA) HSP 1 Score: 369 bits (947), Expect = 1.100e-100 Identity = 257/685 (37.52%), Postives = 320/685 (46.72%), Query Frame = 3
Query: 5871 DIRIGPDGVVLSPSSLRELGMA-----DGFS--NPGHSQHDRSSLTARFEDEINECVGAMRLQKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENP-GVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVKTMDGHVPKH----VKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAPLDLSVTSGSLAGSTIDRSYSKPLSATPATSSAAAMPFGTPSESGRRLSKLSNLANRKRRTSLE-----SSLGNKMH--------------PPMIRGWARTKSETQQTWRRRYVALFRSADGS----------------------------------------------VAKDAIYFFGDPAMCDKMVGQSLHASHSCLPLGDV 7694
D + D + +SLR M+ D S +P + RS+L+ E EI + + M K+ V KFN NPKDG+ +L+EQ I +TP+ +C+FL GLSKR++GEYFGR++ Q+V LFL L F LTLDEALR MV++FRMPGEAQQID IME F++R+ +NP +FSC TAYILAFSLMMLNTDMYNRNL+ E+ QF +NNRGID+G DLP+E L+ MY R EIRM EGDMFESEVITFVAPK SGWL KK G W R+WFVL D VLYYF APQ DEAPRCIIPLE + + PVG TDLTI+ VKSVKMM +G+ME+ +H+ F+ RAE Q RD W+ LR E S S A ++ S TPA G S G + + +RRTS E S G H PP +RGWART++E T RRY A+F+ + + + D +YFFG MCD+MV Q LH SH + L DV
Sbjct: 643 DAALPADAAACTRASLRARSMSPRRTQDPVSPNSPAGATRHRSALSELIESEIIKRLSTMHDAKVRTTAVTKFNANPKDGIRYLVEQSVIRETPQDVCEFLVHETGLSKRKMGEYFGRNSAFHQQVFELFLGHLDFKGLTLDEALRRMVVRFRMPGEAQQIDR------------------------IMEHFAKRWFSDNPDSMFSCVDTAYILAFSLMMLNTDMYNRNLREGEKMTVEQFCNNNRGIDQGKDLPKELLDGMY-------------------------------------------------ARSRQYXXXXXXXXXXXXXXXXNEIRMDEGDMFESEVITFVAPKISGWLRKKSNGVFAGWKRHWFVLVDGVLYYFFAPQ--DEAPRCIIPLERITVQPVGKTDLTITAXXXXXXXXXXXXXXXGLVKSVKMMDDGRMEQGSHKEFVLRAEKQDERDRWLLGLRSEA----------SASAAEPLLEAST------TPAR--------GGSSHKGNK--------HMRRRTSFEKQRSSSHKGQGAHAAADVKKQVNVRVPPPCLRGWARTQNEGGPTSSRRYCAIFKGVESAGGPFSPLSDSTSHSTSPTVTSDIPEGDADAGPTRGLIHEATGSSSCLRLDVLYFFGSSEMCDRMVDQQLHTSHGRINLADV 1220
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A7S2SP39_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SP39_9STRA) HSP 1 Score: 254 bits (650), Expect = 2.590e-67 Identity = 192/653 (29.40%), Postives = 280/653 (42.88%), Query Frame = 3
Query: 5901 LSPSSLRELGMADGFSNPGHSQHDRSS-----LTARFEDEINECVGAMRLQKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFL-SIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGV-FSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVKTMDGHVPKHVKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAPLDLSVTSGSLAGSTIDRSYSKPLSATPATSSAAAMPFGTPSESGRRLSKLSNLANRKRRTSLESSLGNKMHPPMIRGWARTKSETQQTWRRRYVALFRSADGSVAKDAIYFFGDPAMCDKMVGQSLHASHSCLPLGDVYGVRQETSDMDHAIALQTNGKSENSKEHVIVPEEQSDFSSWLGFINEY 7838
L P + L G G + R S + + + I K KFN+ P DG+NFL+E+ + TP+ + +L +GLSKRRLGEY G +Q+VL+ FL F+ TLD+ALR ++ FR+PGEAQQID I+E+FS RY E NP FS + T YILAFSL+MLNTD++N N+ +++ F+ NN+GID G D+P+E L YQR+ + D EIRM EGD +E +V+TF+AP K+GWL+K+ G + +W R+WFVL++ VLYYF AP E PR I+P+++V VG L + D + K K + NG+ME N + F RA R+EW ALR E+ Q P+ R++ + A P + G RL+ + + ++ PP+ +GW + + + W++RYVAL + A+Y+F D+M+ L L V V T D A +Q + N PE F+ W + +Y
Sbjct: 78 LGPEEIAVLESGGGNDAEGGEEETRPSTALPKMNSAIQSGIRRRGSVTMAATAFKQAATKFNIKPSDGINFLVEKRLVEGTPKSVARYLHKRADGLSKRRLGEYLGNVKDFNQEVLTHFLAEYSFAETTLDDALRVLLRDFRLPGEAQQIDR------------------------ILEKFSRRYFETNPQCGFSNADTVYILAFSLIMLNTDLHNPNIPEAKKMKLDGFLRNNKGIDDGKDVPEETLCIYYQRI-----------------------------------------------KDD-------------------EIRMNEGDQWEGDVVTFMAPNKTGWLSKQNHGGMTRWKRHWFVLSEHVLYYFEAPG--SERPRFILPMDDVR---VGRGKDARVLNILGASDARI----KCTKCLDNGKMELQNFKEFTIRAANPKEREEWYEALRDELEQDPVKKMQRLAEAKRKDEQRAFQNRV----------AQPAHNDGKDGHRLNDIHLV---------------ELPPPVAQGWMQKRGDKNTNWKKRYVALIDPPEELHLGVALYYFEAKQQMDRMLEIGEQTQKGQLFLEHVQKVSVTTDKSDKAAIIQLVCEGRN---WTFRPEGAEGFTYWSSILEQY 603
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A7S2SQ40_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SQ40_9STRA) HSP 1 Score: 214 bits (544), Expect = 2.040e-56 Identity = 146/442 (33.03%), Postives = 205/442 (46.38%), Query Frame = 3
Query: 5901 LSPSSLRELGMADGFSNPGHSQHDRSS-----LTARFEDEINECVGAMRLQKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFL-SIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGV-FSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVKTMDGHVPKHVKSVKMMGNGQMEKNNHRSF 7205
L P + L G G + R S + + + I K KFN+ P DG+NFL+E+ + TP+ + +L +GLSKRRLGEY G +Q+VL+ FL F+ TLD+ALR ++ FR+PGEAQQID I+E+FS RY E NP FS + T YILAFSL+MLNTD++N N+ +++ F+ NN+GID G D+P+E L YQR+ + D EIRM EGD +E +V+TF+AP K+GWL+K+ G + +W R+WFVL++ VLYYF AP E PR I+P+++V VG L + D + K K + NG+ME N + F
Sbjct: 78 LGPEEIAVLESGGGNDAEGGEEETRPSTALPKMNSAIQSGIRRRGSVTMAATAFKQAATKFNIKPSDGINFLVEKRLVEGTPKSVARYLHKRADGLSKRRLGEYLGNVKDFNQEVLTHFLAEYSFAETTLDDALRVLLRDFRLPGEAQQIDR------------------------ILEKFSRRYFETNPQCGFSNADTVYILAFSLIMLNTDLHNPNIPEAKKMKLDGFLRNNKGIDDGKDVPEETLCIYYQRI-----------------------------------------------KDD-------------------EIRMNEGDQWEGDVVTFMAPNKTGWLSKQNHGGMTRWKRHWFVLSEHVLYYFEAPG--SERPRFILPMDDVR---VGRGKDARVLNILGASDARI----KCTKCLDNGKMELQNFKEF 420
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A8D1AW76_PIG (Uncharacterized protein n=5 Tax=Suina TaxID=35497 RepID=A0A8D1AW76_PIG) HSP 1 Score: 185 bits (469), Expect = 2.280e-46 Identity = 134/428 (31.31%), Postives = 203/428 (47.43%), Query Frame = 3
Query: 6036 QKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEA------------MYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVK-TMDGHVPKHVKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAP 7280
+K +G KFN++P G+ +L+E ++ + I FL GL+K +G Y G +P++ +VL F+ +F+NL L +ALR + FR+PGEAQ+ID +ME F+ RY NPGVF + T Y+L+FS++MLNT ++N N++ +R P +FVS NRGI+ G DLP+EQL + QR R+ WL VV++ T T ++ F + P I +G+ TF P + GWL K G G VK W R WF+L D+ LYYF D+ PR IIPLEN+++ V L+ + G +K+ K G+G++ + H S+ A + RD+W+ A+R + + P
Sbjct: 62 EKELSIGRKKFNMDPVKGIQYLIEHKLLSPDVQDIAQFLYKGEGLNKTAIGTYLGERDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDR------------------------MMETFAARYCLCNPGVFQSTDTCYVLSFSIIMLNTSLHNPNVR--DRPPFERFVSMNRGINDGSDLPEEQLRPPPQQPGQKVGRKIPQRRTEENRKKAGRTKGWL---------------PVVFLITSTQP----------------QNLFDSIKNEPFSIPEDDGNDLTH---TFFNPDREGWLLKLG-GRVKTWKRRWFILTDSCLYYFEFTT--DKEPRGIIPLENLSVQKVDDPKKPFCLELYNPSCRGQ---KIKACKTDGDGKVVEGKHESYRISAASAEERDQWIQAIRASITRVP 423
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: W7TR99_9STRA (Cytohesin 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TR99_9STRA) HSP 1 Score: 181 bits (459), Expect = 2.190e-43 Identity = 132/420 (31.43%), Postives = 198/420 (47.14%), Query Frame = 3
Query: 6036 QKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSI-VNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHE--ENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVK--KWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVN-IDPVGSTDLTISLKSVKTMDGHVPKHVKSVKMMGNGQMEK----NNHRSFIFRAETQANRDEWVHALRVE 7265
+++ + G+ KFN G++FL+E + P + +L+ LSK+RLGEY G ++ +Q+VL L+ F +++DEA+R + RMPGEAQ +D I+ F++R+ E N ++ T YIL+FS+M+LNTD++NRNL E+ F+ NNRGI+ G DLP E L +Y ++ E+RM+EGDM+ESE +TFVAP+ SGWL K+ +G + +++R+WFVL + L+YF +P D PRCII LE V I ST++ + G + +KSVK+ G+ +K H FIFR +Q RDEWV A + E
Sbjct: 116 KRLIEQGIAKFNEKAAAGIDFLIENGVLQRAPADVAVWLNQQALELSKKRLGEYLGGNDSFAQEVLHQLLQDYDFQGMSIDEAMRVFINDIRMPGEAQMLDR------------------------ILNAFAKRFFETTRNENQYATEDTVYILSFSIMLLNTDLHNRNLPRKEKMRLEDFIRNNRGINAGRDLPPELLSTLYYSIKRK------------------------------------------------------------------ELRMKEGDMWESESLTFVAPRMSGWLEKQLQGQLGFCRFHRFWFVLTNGCLFYFSSPV--DRNPRCIIILEAVMAIKGASSTEIILYSNG-----GGI---IKSVKI---GKRDKATTRGQHTHFIFRTGSQKERDEWVEAFQTE 432
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A674N0Y8_TAKRU (Uncharacterized protein n=14 Tax=Clupeocephala TaxID=186625 RepID=A0A674N0Y8_TAKRU) HSP 1 Score: 173 bits (439), Expect = 1.160e-42 Identity = 139/475 (29.26%), Postives = 208/475 (43.79%), Query Frame = 3
Query: 5895 VVLSPSSLRELGMADGFSNPGHSQHDRSSLTARFEDEINECVG-------AMRLQKIEK--MGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVKTMDGHVPKH----VKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAP 7280
V LSP EL D G + L D I E G + LQK MG KFN++PK G+ FL+E + + TPE I FL GL+K +G+Y G + + KVL F+ +F++L L +ALR + FR+PGEAQ+ID +ME F++RY NPGVF + T Y+L+F+++MLNT ++N N++ ++ +F+S NRGI+ G DLP+E L +Y+ ++ + P D H P E + + S + T V SG G VK W R WF+L D LYYF D+ PR IIPLEN++I V + + ++P + +K+ K +G++ + NH + A T +DEW+H+++ V P
Sbjct: 8 VDLSPEERSEL--EDIRRRKGVLLQEIQRLREELRDAILEVEGLEASTEGSKTLQKSRHVAMGRKKFNMDPKKGIVFLVENELLRHTPEDIAQFLYKGEGLNKTAIGDYLGERDDFNIKVLQAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDR------------------------MMEAFAQRYCHCNPGVFQSTDTCYVLSFAIIMLNTSLHNPNVR--DKPAVDRFISMNRGINEGGDLPEELLRNLYESIK-NEPFKIPEDDG--------------------------------------------NDLTHTFFNPDREGWLLKLGKTMSPLSTLVRSAVSG-------GRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLSIREVEDP------RKPNCFELYIPNNRGQLIKACKTEADGRVVEGNHMVYRISAPTPEEKDEWIHSIKSAVSVDP 394
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A671MMN9_9TELE (Cytohesin-3 n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A671MMN9_9TELE) HSP 1 Score: 171 bits (432), Expect = 7.640e-42 Identity = 126/434 (29.03%), Postives = 198/434 (45.62%), Query Frame = 3
Query: 6000 DEINECVGAMRLQKIEKMGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMF---ESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVKTMDGHVPKH----VKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAP 7280
D+I + K MG KFN++PK G+ FL+E D + TPE I FL GL+K +G+Y G + + KVL F++ +F++L L +ALR + FR+PGEAQ+ID +ME F+ RY + NPGVF + T Y+L+F+++MLNT ++N N++ ++ +F+S NRGI+ G DLP+E L +Y+ ++ S P D H P REG + +++ +TF +G G VK W R WF+L D LYYF D+ PR IIPLEN++I V + + + P H +K+ K +G++ + NH + A T ++EW+ +++ + + P
Sbjct: 47 DDIEVRTKTTQRNKQIAMGRKKFNMDPKKGIQFLLENDLLQQTPEDIAQFLYKGEGLNKTVIGDYLGERDEFNIKVLQAFVELHEFADLNLVQALRQFLWSFRLPGEAQKIDR------------------------MMEAFASRYCQCNPGVFQSTDTCYVLSFAIIMLNTSLHNPNVR--DKPAVERFISMNRGINDGGDLPEELLRNLYESIK-SEPFKIPEDDG--------------------------------------------NDLTHTFFNPD-----REGWLLKLGQNQTLTFCLICFAG-------GRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLSIREVEEP------RKPNCFELYNPNHKGQVIKACKTEADGRVVEGNHVVYRISAPTPEEKEEWIKSIKASISRDP 389
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: UPI000703EB3F (cytohesin-4 n=1 Tax=Myotis brandtii TaxID=109478 RepID=UPI000703EB3F) HSP 1 Score: 171 bits (434), Expect = 9.470e-42 Identity = 144/489 (29.45%), Postives = 212/489 (43.35%), Query Frame = 3
Query: 5886 PDGVVLSPSSLRELGMADGFSNPGHSQHDRSSLTARFED-----EINECVGAMRLQKIEK---MGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEV---------------ITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNIDPVGSTDLTISLKSVK-TMDGHVPKHVKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAP 7280
PD V LS EL D L ED + E R+ + EK +G KFN++P G+ +L+E +T + I FL GL+K +G Y G +P++ +VL F+ +F+NL L +ALR + FR+PGEAQ+ID +ME F+ RY NPGVF + T Y+L+FS++MLNT ++N N++ ++ P +FVS NRGI+ G DLP++QL RV+ G AS V G S S+ L R P +E FES +T + P G VK W R WF+L D+ LYYF D+ PR IIPLEN+++ V L+ + G +K+ K G+G++ + H+S+ A + RD+W+ A+R + + P
Sbjct: 6 PDPVELSSGETEELQRIKWHRK--QLLDDIQKLKDEIEDVFAQIDCFEMTEESRMAQKEKELCIGRKKFNMDPVKGIQYLIEHKLLTSNAQDIARFLYKGEGLNKTAIGTYLGERDPINLQVLQAFVDCHEFANLNLVQALRQFLWSFRLPGEAQKIDR------------------------MMETFATRYCLCNPGVFQSTDTCYVLSFSIIMLNTSLHNPNVR--DKPPFERFVSMNRGINAGSDLPEDQL-----RVRGRGLASPVNDGQPERAAPS-----------------------SFSSSDGQKALHRERKSLSGTPAPQSEPTQNRSFAFESRASKPRGGXXXXXXXXXLTLLWP--------LAGGRVKTWKRRWFILTDSCLYYFEFTT--DKEPRGIIPLENLSVQKVEDPKKPFCLELYNPSCRGQ---KIKACKTDGDGKVVEGKHQSYRISASSAEERDQWIEAIRASITRVP 425
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Match: A0A8B9RDA8_ASTMX (Cytohesin-2 n=2 Tax=Clupeocephala TaxID=186625 RepID=A0A8B9RDA8_ASTMX) HSP 1 Score: 169 bits (429), Expect = 2.500e-41 Identity = 137/486 (28.19%), Postives = 214/486 (44.03%), Query Frame = 3
Query: 5841 LSPKGMQQAHDIRIGPDGVVLSPSSLRELGMADGFSNPGHSQHDRSSLTARFEDEINECVGAMRLQKIEK--MGVNKFNVNPKDGLNFLMEQDFITDTPEGICDFLSIVNGLSKRRLGEYFGRDNPVSQKVLSLFLKRLQFSNLTLDEALRAMVLKFRMPGEAQQIDSTRFHILVVCCLSSTRYLYRRMEFSIMERFSERYHEENPGVFSCSQTAYILAFSLMMLNTDMYNRNLKASERSPQTQFVSNNRGIDRGLDLPQEQLEAMYQRVQVSGPASCVRSGSWLGVCQSVHMAVGVYIHSVVYMSTFTNVWLSWCCRGDYCELQLMRDFFHVMLRPPAEIRMREGDMFESEVITFVAPKKSGWLNKKGKGYVKKWNRYWFVLADAVLYYFLAPQHQDEAPRCIIPLENVNI----DPVGSTDLTISLKSVKTMDGHVPKHVKSVKMMGNGQMEKNNHRSFIFRAETQANRDEWVHALRVEVPQAP 7280
LSP+ + +IR ++L LRE + E + G+ LQK MG KFN++PK G+ FL+E + + TPE I FL GL+K +G+Y G + + +VL F+ +F++L L +ALR + FR+PGEAQ+ID +ME F++RY NPGVF + T Y+L+F+++MLNT ++N N++ ++ +F+S NRGI+ G DLP+E L +Y ++ + P D H P REG + + VI +++ G G VK W R WF+L D LYYF D+ PR IIPLEN++I DP + + + + G + +K+ K +G++ + NH + A T +DEW+H+++ V P
Sbjct: 20 LSPEERSELEEIRRRKGALLLEIQRLRE---------------ELREAIIEVEGLESSTEGSKTLQKSRHVAMGRKKFNMDPKKGIVFLVENELLRHTPEDIAQFLYKGEGLNKTAIGDYLGERDEFNIRVLQAFVDLHEFTDLNLVQALRQFLWSFRLPGEAQKIDR------------------------MMEAFAQRYCHCNPGVFQSTDTCYVLSFAIIMLNTSLHNPNVR--DKPTVERFISMNRGINEGGDLPEELLRNLYDSIK-NEPFKIPEDDG--------------------------------------------NDLTHTFFNPD-----REGWLLKLVVI---------YISLSG-GRVKTWKRRWFILTDNCLYYF--EYTTDKEPRGIIPLENLSIREVEDPRKPNCFELYIPNNR---GQL---IKACKTEADGRVVEGNHMVYRISAPTPEEKDEWIHSIKSAVSVDP 396 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig330.8853.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig330.8853.1 >prot_H-paniculata_contig330.8853.1 ID=prot_H-paniculata_contig330.8853.1|Name=mRNA_H-paniculata_contig330.8853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=950bp MVQQRLPESPDPRCTSRYPVQTPTALVGSRTWMDCISSKQGDEGDGEEAVback to top mRNA from alignment at H-paniculata_contig330:23535..35984+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig330.8853.1 ID=mRNA_H-paniculata_contig330.8853.1|Name=mRNA_H-paniculata_contig330.8853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12450bp|location=Sequence derived from alignment at H-paniculata_contig330:23535..35984+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig330:23535..35984+ >mRNA_H-paniculata_contig330.8853.1 ID=mRNA_H-paniculata_contig330.8853.1|Name=mRNA_H-paniculata_contig330.8853.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=5700bp|location=Sequence derived from alignment at H-paniculata_contig330:23535..35984+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |