mRNA_H-paniculata_contig3294.8831.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3294.8831.1
Unique NamemRNA_H-paniculata_contig3294.8831.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5JAU4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JAU4_9PHAE)

HSP 1 Score: 257 bits (656), Expect = 3.150e-80
Identity = 131/246 (53.25%), Postives = 162/246 (65.85%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQP-------------LHGVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            LQ+L RGNCF DI  MS +   T    FH+F + F+ E++ EHIFLPTG   +KVM +YDRLGF+G  GSTDVTHI W  CP + A+SYTGKEG+ T+AYQ TVDH  RVLAVT GF G+TNDKSIIRYD A       +R DP  S+              L G ++ +     +W   + PSK  +   +  +SK  ESVRKDVECFFG++KGR RILKL I Y ++EDI+NVFF CCI+HNML
Sbjct:  163 LQILARGNCFADIYHMSFISMQTAAATFHRFTRYFAREMYAEHIFLPTGDYQKKVMTQYDRLGFSGATGSTDVTHIPWGMCPYNQARSYTGKEGYPTVAYQVTVDHTKRVLAVTPGFTGSTNDKSIIRYDTAVT----KIREDPIYSEKEFTVYEADGTPYQLKGCYLLVDNGYHKWVTLIPPSKYPIDQNDLAFSKRLESVRKDVECFFGIVKGRFRILKLSIPYHKQEDIDNVFFTCCILHNML 404          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5KY50_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KY50_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.120e-77
Identity = 127/246 (51.63%), Postives = 163/246 (66.26%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQPLH-------------GVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            LQ+L RGN F DI  MS +   TV   FH+FCK F+AEL+ E+++LPTG+DL KVM +YDR+GF G VGSTDVTHI W  CP + A+ YTGKEG  T+A+Q TVDH GRVLAVT+GF GATNDK+IIRYD A       +R DP  ++  +             G ++ +     +W   + PSK  +   +  +SK  ES RKDVEC+FG+LKGR RI KL I + ++E I+NVFF CCI+HNML
Sbjct:   88 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVT----RIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNML 329          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5JPH7_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPH7_9PHAE)

HSP 1 Score: 248 bits (633), Expect = 1.290e-76
Identity = 127/246 (51.63%), Postives = 163/246 (66.26%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQPLH-------------GVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            LQ+L RGN F DI  MS +   TV   FH+FCK F+AEL+ E+++LPTG+DL KVM +YDR+GF G VGSTDVTHI W  CP + A+ YTGKEG  T+A+Q TVDH GRVLAVT+GF GATNDK+IIRYD A       +R DP  ++  +             G ++ +     +W   + PSK  +   +  +SK  ES RKDVEC+FG+LKGR RI KL I + ++E I+NVFF CCI+HNML
Sbjct:  179 LQILSRGNVFADIYHMSFISFQTVASTFHRFCKYFAAELYDEYVYLPTGEDLRKVMEQYDRIGFPGAVGSTDVTHIYWGMCPYNQARIYTGKEGKPTVAFQVTVDHSGRVLAVTRGFTGATNDKTIIRYDKAVT----RIRTDPVYTEQKYKLYAQDGQQFEEKGCYLLVDNGYHKWRTLIPPSKCPIDRGDLIFSKRLESARKDVECYFGILKGRFRINKLAIGFHKQEYIDNVFFTCCILHNML 420          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5KSI7_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSI7_9PHAE)

HSP 1 Score: 240 bits (612), Expect = 5.640e-75
Identity = 122/237 (51.48%), Postives = 154/237 (64.98%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANI---------HHCPLRADPSLSQPLHGVFICIQWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            L+VLG+GNCFDD+ Q+S M ES  Q  FHKFC+  +AE+F EHI+LPTG  L++VM  + +LG TG  GSTDVTHI  + CP +  +S+TGKEGF TIAY+ TVDH GR LAVT GF G TNDK+ IRYD   N              LR      +   G F+ +    +          E+T +S+  ESVRKDVECFFG+LKGR RILKL + Y ++E I+N+FF CCI+HNML
Sbjct:  137 LKVLGKGNCFDDVEQLSKMSESIAQALFHKFCRHSAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGRNMCPFTLGRSFTGKEGFPTIAYEVTVDHAGRALAVTNGFAGGTNDKTTIRYDSGVNKIRTESQYTEREYKLRKVNGTERTRRGCFLIVDNGYYE-------SNEDTAFSRHLESVRKDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNML 366          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5K796_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K796_9PHAE)

HSP 1 Score: 235 bits (600), Expect = 3.520e-73
Identity = 121/241 (50.21%), Postives = 154/241 (63.90%), Query Frame = 1
Query:    4 QVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANI---------HHCPLRADPSLSQPLHGVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            QVLG+GNCFDD+ Q+S M +S  Q  FHKFC+ F+AE+F EHI+LPTG  L++VM  + +LG+TG  GSTDVTHI W+ CP +  +S+TGKEGF TIAY  TVDH GR LAVT GF GATNDK+IIRYD   N              LR      +   G F+ +     +W   + PSK     E+T +S+  ESVRKDV CF        RILKL + Y ++E ++N+FF CCI+HNML
Sbjct:   42 QVLGKGNCFDDVEQLSKMSKSMAQPTFHKFCRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGWTGACGSTDVTHIGWNMCPFTLGRSFTGKEGFPTIAYDVTVDHDGRDLAVTNGFTGATNDKTIIRYDSGVNKIRTASQYTEREYKLRKANGTKRMRRGCFLIVDNGYHEWVTLIAPSKYPQRNEDTAFSRDLESVRKDVGCF--------RILKLRMPYHKREYVDNIFFTCCILHNML 274          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5KNX4_9PHAE (DDE Tnp4 domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KNX4_9PHAE)

HSP 1 Score: 234 bits (598), Expect = 4.870e-72
Identity = 128/272 (47.06%), Postives = 162/272 (59.56%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQD--LEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAA-----NIHHCPLRA--------------------------------DPSLSQPLHGVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            L +LGRGNCF  I QMS M   TVQG FHKFC+ F+ E++ E I LPT +   L+ VM +YDRLGFTG VGS DVTHI W  CP + A+SYTGKEGF TIAYQ TVDH GR +AVT+GF G+TNDK+I+ +D A      + H+                                     +   +  L G ++ +     +W + + PSK  L   +  +SK  ESVRKDVECFFG+LKGR RILKL + Y+ +E I+NVFF C I+HNML
Sbjct:   90 LTILGRGNCFASIYQMSWMSAKTVQGMFHKFCRHFAREMYDEQIHLPTEESGKLDHVMKQYDRLGFTGAVGSMDVTHIAWSRCPYNQARSYTGKEGFPTIAYQVTVDHAGRAIAVTEGFTGSTNDKTIVCWDTAVEKIWTDKHYTXXXXXXXXXXXXXXXXXXXXXXXXXXXXEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWQILIEPSKYPLSENDLLFSKRLESVRKDVECFFGILKGRFRILKLAMEYQSQERIDNVFFTCYILHNML 361          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5JHI0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHI0_9PHAE)

HSP 1 Score: 233 bits (594), Expect = 5.260e-72
Identity = 119/248 (47.98%), Postives = 158/248 (63.71%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQ--DLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQP-------------LHGVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            L +LGRGNCF  I Q+S M   TVQ  FHKFCK F+ E++ EHI+LP+ Q  +L+ VM +YDRLGF+G +GS DVTHI W  CP + A+SYTGKEG  T+ YQ TV+H GR +AVT+GF  +TNDK+ + +D         +R D   ++              L G ++ +     +W + M P+K  L   +  +SK  ESVRKDVECFFG+LKG  RI K+ + Y E+E I+NVFF CCI+HNML
Sbjct:  103 LTILGRGNCFASIYQVSWMSAKTVQTMFHKFCKHFAREMYDEHIYLPSEQNGELDHVMKQYDRLGFSGAMGSMDVTHIGWSKCPYNLARSYTGKEGVPTVGYQVTVNHAGRAIAVTEGFTDSTNDKTTVCWDAVVE----KIRTDNQYTEKTFDVYNEDGTTTTLKGCYLLVDNGYHKWKILMEPTKYPLSENDILFSKRLESVRKDVECFFGILKGCFRIQKVAMAYHEQERIDNVFFTCCILHNML 346          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5JBE2_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBE2_9PHAE)

HSP 1 Score: 227 bits (579), Expect = 5.280e-69
Identity = 119/248 (47.98%), Postives = 161/248 (64.92%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQ--DLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQP-------------LHGVFICI-----QWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            L +LGRGN F  I  +S M   TVQ  FH+FC+ F+ E++ EHIFLP+ +  +L++VM +Y++LGF G +GSTDVTHI W  CP +  +SYTGKEG  T+ YQ TV+H GRVLAVT+GF G+TNDK+II  D A +     +R D   ++              L G ++ +     +W M + PSK  L   +  +SK  ESVRKDVECFFG+LK R RILKL + Y+++E ++ VFF CCI+HNML
Sbjct:  132 LTILGRGNVFGSIYNLSWMSTPTVQKVFHQFCEHFATEMYDEHIFLPSEENGELDRVMGQYEKLGFPGAMGSTDVTHIGWSRCPYNQGRSYTGKEGKPTVGYQVTVNHAGRVLAVTEGFTGSTNDKTIICCDEAVD----RIRTDKQYAEKPFTVHKKDGTTETLKGCYLIVDNGYHKWRMLIEPSKYPLSEADLLFSKRLESVRKDVECFFGILKMRFRILKLAMTYQKQERLDYVFFTCCILHNML 375          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5K872_9PHAE (DDE Tnp4 domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K872_9PHAE)

HSP 1 Score: 212 bits (540), Expect = 1.360e-63
Identity = 111/231 (48.05%), Postives = 144/231 (62.34%), Query Frame = 1
Query:    1 LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQPLHGVFICIQWAMFMLPSKRALCGEETR---WSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            L VLG+GNCFDD+ Q+S M  S  Q  FHKFC+ F+AE+F EHIF PT   L++ M  + +LG TG   STDVTHI  + CP +  +S+TGKEGF TIAY+ TVDH  R LAVT GF GA NDK++I YD   N     +R +   ++  + +             ++A   E TR   +S       +DVECFFG+LKGR RILKL + Y ++E I+N+FF CCI HNML
Sbjct:  102 LTVLGKGNCFDDVEQLSKMSISMAQATFHKFCRHFAAEMFDEHIFSPTETYLDEFMGIFHQLGCTGACRSTDVTHIDCNMCPFTLGRSFTGKEGFPTIAYEVTVDHASRALAVTNGFTGAMNDKTVIWYDSGVN----DIRTESQYTERQYKL-------------RKANGTERTRRGCFSIVDNGYHEDVECFFGILKGRFRILKLRMPYHKREYIDNIFFTCCIRHNML 315          
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Match: A0A6H5JIW4_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIW4_9PHAE)

HSP 1 Score: 206 bits (523), Expect = 6.280e-63
Identity = 106/227 (46.70%), Postives = 137/227 (60.35%), Query Frame = 1
Query:    4 QVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQDLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAYQATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQPLHGVFICIQWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVRILKLPILYREKEDIENVFFACCIVHNML 684
            +VLG+G CFDD+ Q+S M +S  Q  FHKF + F+AE+F EHI+LPTG  L++VM  + +LG TG  GSTDVTHI W+ CP +  + +TGKEGF TIAY+ TVDH GR LAV  GF GATNDK+ IRYD   N     +R +  L Q                  +R             + V +      G+LKGR RILKL + Y ++E I+N+FF CCI+HNML
Sbjct:    3 RVLGKGTCFDDVEQLSKMSKSMAQATFHKFRRHFAAEMFDEHIYLPTGTYLDEVMGIFHQLGCTGACGSTDVTHIGWNMCPFTLGRPFTGKEGFPTIAYEVTVDHAGRTLAVANGFTGATNDKTTIRYDSGVN----NIRTEYKLRQ-----------------GERHRANAPRMVIDGGQRVPRGCGVLLGILKGRFRILKLRMPYHKREYIDNIFFTCCILHNML 208          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3294.8831.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JAU4_9PHAE3.150e-8053.25Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KY50_9PHAE1.120e-7751.63Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JPH7_9PHAE1.290e-7651.63Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KSI7_9PHAE5.640e-7551.48DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5K796_9PHAE3.520e-7350.21Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KNX4_9PHAE4.870e-7247.06DDE Tnp4 domain-containing protein n=1 Tax=Ectocar... [more]
A0A6H5JHI0_9PHAE5.260e-7247.98Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JBE2_9PHAE5.280e-6947.98Uncharacterized protein n=2 Tax=Ectocarpus sp. CCA... [more]
A0A6H5K872_9PHAE1.360e-6348.05DDE Tnp4 domain-containing protein (Fragment) n=1 ... [more]
A0A6H5JIW4_9PHAE6.280e-6346.70Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3294contigH-paniculata_contig3294:15381..16518 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score200.3
Seed ortholog evalue9.8e-49
Seed eggNOG ortholog2880.D7FSK2
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Plant transposon protein
EggNOG OGs2E2RF@1,2S9YA@2759
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons2
Model size684
Cds size684
Stop0
Start0
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930016.0491874-CDS-H-paniculata_contig3294:15380..156681622930016.0491874-CDS-H-paniculata_contig3294:15380..15668Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3294 15381..15668 -
1691481111.0481613-CDS-H-paniculata_contig3294:15380..156681691481111.0481613-CDS-H-paniculata_contig3294:15380..15668Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3294 15381..15668 -
1622930016.0688965-CDS-H-paniculata_contig3294:16122..165181622930016.0688965-CDS-H-paniculata_contig3294:16122..16518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3294 16123..16518 -
1691481111.0615525-CDS-H-paniculata_contig3294:16122..165181691481111.0615525-CDS-H-paniculata_contig3294:16122..16518Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3294 16123..16518 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3294.8831.1prot_H-paniculata_contig3294.8831.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3294 15381..16518 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3294.8831.1

>prot_H-paniculata_contig3294.8831.1 ID=prot_H-paniculata_contig3294.8831.1|Name=mRNA_H-paniculata_contig3294.8831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=228bp
LQVLGRGNCFDDISQMSLMGESTVQGAFHKFCKKFSAELFHEHIFLPTGQ
DLEKVMHEYDRLGFTGVVGSTDVTHIKWDCCPCSFAQSYTGKEGFATIAY
QATVDHIGRVLAVTKGFPGATNDKSIIRYDLAANIHHCPLRADPSLSQPL
HGVFICIQWAMFMLPSKRALCGEETRWSKTSESVRKDVECFFGVLKGRVR
ILKLPILYREKEDIENVFFACCIVHNML
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mRNA from alignment at H-paniculata_contig3294:15381..16518-

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3294.8831.1 ID=mRNA_H-paniculata_contig3294.8831.1|Name=mRNA_H-paniculata_contig3294.8831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1138bp|location=Sequence derived from alignment at H-paniculata_contig3294:15381..16518- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCAGGTGCTGGGCAGGGGAAACTGCTTTGATGACATTTCTCAGATGTC CCTCATGGGCGAGTCGACAGTGCAAGGAGCATTCCACAAGTTCTGCAAGA AATTTTCGGCAGAGCTATTCCATGAGCATATATTCCTGCCGACGGGGCAG GATCTCGAGAAGGTCATGCATGAGTATGACCGCTTGGGGTTCACCGGGGT CGTCGGCTCCACCGATGTTACCCACATCAAATGGGACTGCTGCCCGTGCT CGTTTGCACAGTCTTACACGGGCAAGGAGGGATTCGCGACCATTGCATAC CAAGCGACGGTCGATCATATCGGCCGCGTCCTTGCCGTCACGAAAGGTTT TCCTGGGGCTACCAACGACAAGTCGATAATCCGTTACGACCTAGCGGTGC AGATGGTTCGTGAGGATTCCATTTATAGTGACCGAAGTTCAGGCTCTATA ACGAGGACGGCACATGGACGCACAAGGATGTCTATCTGCTGGTGGACAAT GGGTATCATGAAGTGAGTGTGATACAAGTAACGTCACATTTTAACCCGAA ATGTATGTGGGGGCTGTATGACACGAGCGATATGACCGCGTCAGGAGCAC AATGTTTCCACATTGCCGTCAATAAAGGCCGAGATTTAATGTAGCCCAAA CGCGTACATACAGCACAGGTGAGAAACACGGTACGTATCGCTGTCATCAG TAGGTCGCGAATTAATTTTTCGACGCCGTCTTAAAACACATACCCGTAGA AAAGGAGGAACTTCAACATAACATTACATAAAACGTTTCCTATAACATGG TAGCATCGCTGTTTACCCGTCGAAGGGGTCGATGGCGACCCGCATGAGAG GCCAACATACATCATTGCCCGCTCCGTGCAGACCCATCACTATCTCAACC ACTCCACGGCGTGTTCATATGCATACAGTGGGCTATGTTCATGCTCCCGT CGAAGCGTGCTTTGTGTGGCGAGGAGACGCGATGGAGCAAGACATCGGAG AGTGTACGAAAGGATGTGGAGTGCTTCTTCGGTGTCCTGAAGGGCCGCGT TAGAATCCTCAAACTCCCCATCCTCTACCGCGAAAAAGAGGACATCGAAA ATGTCTTCTTCGCATGCTGCATCGTCCACAACATGCTG
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Coding sequence (CDS) from alignment at H-paniculata_contig3294:15381..16518-

>mRNA_H-paniculata_contig3294.8831.1 ID=mRNA_H-paniculata_contig3294.8831.1|Name=mRNA_H-paniculata_contig3294.8831.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1368bp|location=Sequence derived from alignment at H-paniculata_contig3294:15381..16518- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CTTCAGGTGCTGGGCAGGGGAAACTGCTTTGATGACATTTCTCAGATGTC
CCTCATGGGCGAGTCGACAGTGCAAGGAGCATTCCACAAGTTCTGCAAGA
AATTTTCGGCAGAGCTATTCCATGAGCATATATTCCTGCCGACGGGGCAG
GATCTCGAGAAGGTCATGCATGAGTATGACCGCTTGGGGTTCACCGGGGT
CGTCGGCTCCACCGATGTTACCCACATCAAATGGGACTGCTGCCCGTGCT
CGTTTGCACAGTCTTACACGGGCAAGGAGGGATTCGCGACCATTGCATAC
CAAGCGACGGTCGATCATATCGGCCGCGTCCTTGCCGTCACGAAAGGTTT
TCCTGGGGCTACCAACGACAAGTCGATAATCCGTTACGACCTAGCGCTTC
AGGTGCTGGGCAGGGGAAACTGCTTTGATGACATTTCTCAGATGTCCCTC
ATGGGCGAGTCGACAGTGCAAGGAGCATTCCACAAGTTCTGCAAGAAATT
TTCGGCAGAGCTATTCCATGAGCATATATTCCTGCCGACGGGGCAGGATC
TCGAGAAGGTCATGCATGAGTATGACCGCTTGGGGTTCACCGGGGTCGTC
GGCTCCACCGATGTTACCCACATCAAATGGGACTGCTGCCCGTGCTCGTT
TGCACAGTCTTACACGGGCAAGGAGGGATTCGCGACCATTGCATACCAAG
CGACGGTCGATCATATCGGCCGCGTCCTTGCCGTCACGAAAGGTTTTCCT
GGGGCTACCAACGACAAGTCGATAATCCGTTACGACCTAGCGGCCAACAT
ACATCATTGCCCGCTCCGTGCAGACCCATCACTATCTCAACCACTCCACG
GCGTGTTCATATGCATACAGTGGGCTATGTTCATGCTCCCGTCGAAGCGT
GCTTTGTGTGGCGAGGAGACGCGATGGAGCAAGACATCGGAGAGTGTACG
AAAGGATGTGGAGTGCTTCTTCGGTGTCCTGAAGGGCCGCGTTAGAATCC
TCAAACTCCCCATCCTCTACCGCGAAAAAGAGGACATCGAAAATGTCTTC
TTCGCATGCTGCATCGTCCACAACATGCTGGCCAACATACATCATTGCCC
GCTCCGTGCAGACCCATCACTATCTCAACCACTCCACGGCGTGTTCATAT
GCATACAGTGGGCTATGTTCATGCTCCCGTCGAAGCGTGCTTTGTGTGGC
GAGGAGACGCGATGGAGCAAGACATCGGAGAGTGTACGAAAGGATGTGGA
GTGCTTCTTCGGTGTCCTGAAGGGCCGCGTTAGAATCCTCAAACTCCCCA
TCCTCTACCGCGAAAAAGAGGACATCGAAAATGTCTTCTTCGCATGCTGC
ATCGTCCACAACATGCTG
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