mRNA_H-paniculata_contig3290.8824.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3290.8824.1
Unique NamemRNA_H-paniculata_contig3290.8824.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: D7G8W6_ECTSI (N-alpha-acetyltransferase 40 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8W6_ECTSI)

HSP 1 Score: 323 bits (828), Expect = 3.050e-103
Identity = 182/314 (57.96%), Postives = 209/314 (66.56%), Query Frame = 1
Query:   85 SPAVRAAEARIKTANSVQDLSLRLEAFLTIDLPGPETSTGKRKHTLYIERPDAGMLGMGTPSDSAARSSAPVRLKIRAPDTLDNGETQVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGD-----------DEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTK-MRYHVDKDSPSKWNQPDEVYEILSKPTRQGLSR 990
            SPAV AA +RI+ AN+  DLS  LEAFL+IDLP                   A + G   P+   A    PVRL+IR+P TL +G+TQVMYDLLK NMHDMY+ AGW WNK EK+REM HRD+RFLIA C   D SG              +E   +++  +  GG        E+  +  S          AGER  +AGYC FRFAWD DEN+DGEGVGG EDVLYVYELQVAPWATRRGLGRRMMQ +ELLANR GMTKVMLTVFK+N QAMSFYTK M+Y VDKDSPS W+QPDEVYEILSKPTRQG +R
Sbjct:   23 SPAVAAAASRIEAANATLDLSAGLEAFLSIDLPAA-----------------AAVSGAAAPTPVPAE---PVRLEIRSPKTLLDGDTQVMYDLLKSNMHDMYMAAGWGWNKAEKWREMEHRDSRFLIARCGTEDDSGPEAAAVGVARLRVAEEGVSESSAVNGAGGA----TDSEEAARARSRGGEERKPGGAGER--IAGYCDFRFAWDQDENEDGEGVGGMEDVLYVYELQVAPWATRRGLGRRMMQAIELLANRHGMTKVMLTVFKENRQAMSFYTKKMKYGVDKDSPSNWDQPDEVYEILSKPTRQGAAR 310          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: A0A835YQQ1_9STRA (N-alpha-acetyltransferase 40 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YQQ1_9STRA)

HSP 1 Score: 108 bits (270), Expect = 3.130e-23
Identity = 71/211 (33.65%), Postives = 99/211 (46.92%), Query Frame = 1
Query:  340 ETQ-VMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTKMRYHVDKDSPSKWNQPDEVYEILSKP 969
            ETQ +++ LLK NM DMY+ AGWAW+  EK  E+    +R L+                                              + A  D    E G+L G+CH+RF   +D       +     VLYVYELQ+A  A R+GLG+R+M + E +   + M+ V+LTVFK N  A+  Y    Y +D   PSKW++  E Y I+SKP
Sbjct:   59 ETQELVFSLLKSNMEDMYISAGWAWDDAEKRNELFSPTSRLLLC--------------------------------------------TSTAQGD----ESGKLLGFCHYRFELYSD-------LKPSRPVLYVYELQLAEGARRKGLGKRLMSIAEAIGAEKRMSVVVLTVFKTNVAAIKLYEGAGYTLDPSDPSKWDRT-ECYAIMSKP 213          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: A0A7S1ZW93_TRICV (N-alpha-acetyltransferase 40 n=1 Tax=Trieres chinensis TaxID=1514140 RepID=A0A7S1ZW93_TRICV)

HSP 1 Score: 104 bits (259), Expect = 6.890e-22
Identity = 80/230 (34.78%), Postives = 119/230 (51.74%), Query Frame = 1
Query:  280 ARSSAPVRLKIRAPDTLDNGETQVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTK-MRYHVDKDSPSKWNQPDEVYEILSK 966
            AR    VR++  A  +L    ++   DL + NM +MY ++ W  +  +K  E  H  ARFL+   + VD                      G +  + E            + +++ G+   LA + HFRF  D D++        K +VLY+YELQV+P   RRGLG+++M ++E +A ++GM KV+LTVFK N  AM+FY   M Y VD+ SPSK+ + D  YEILSK
Sbjct:   22 AREQFTVRIRCVAGKSLAPVASKSCLDLFETNMAEMYQRSSWGLDLRKKADEFRHERARFLL--LEKVD---------------------AGNMEKSVE-----------LMGESSEGKNELLA-FGHFRFEPDDDDHP-------KLEVLYLYELQVSPLYHRRGLGQKLMSIMEDVAKKRGMKKVVLTVFKANVAAMTFYKDGMVYGVDETSPSKFGE-DADYEILSK 208          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: A0A7M7HMI9_STRPU (N-alpha-acetyltransferase 40 n=1 Tax=Strongylocentrotus purpuratus TaxID=7668 RepID=A0A7M7HMI9_STRPU)

HSP 1 Score: 105 bits (261), Expect = 7.280e-22
Identity = 74/230 (32.17%), Postives = 107/230 (46.52%), Query Frame = 1
Query:  328 LDNGETQVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTK-MRYHVDKDSPSKW---NQPDEVYEILSKPTRQGLSRAASQT 1005
            L+   T  +++L+K NM  +Y  + W W   EK  E+ H  A F+IA                 +TA                                     G+L G+CHFRF  D D  D          V+Y YE+Q+ P   R+GLG+ +MQ+LELLA R  M KVM+TVFK+N  A +F+TK ++Y +D+ SPS +   N  D  YEI+SK  +   +  A+ +
Sbjct:   65 LEKDVTDWIFNLVKTNMQSLYESSDWGWKGREKKEELMHEQACFVIA-----------------RTAD------------------------------------GQLVGFCHFRF--DVDFGDA---------VIYCYEIQLTPDVRRKGLGKFLMQILELLAFRTEMKKVMVTVFKNNLVATNFFTKVLKYEIDETSPSMYDPMNDEDYCYEIMSKDIKTKKTAPAANS 230          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: UPI0009E2282E (N-alpha-acetyltransferase 40-like n=1 Tax=Orbicella faveolata TaxID=48498 RepID=UPI0009E2282E)

HSP 1 Score: 102 bits (255), Expect = 7.820e-22
Identity = 71/208 (34.13%), Postives = 98/208 (47.12%), Query Frame = 1
Query:  355 YDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTK-MRYHVDKDSPSKW---NQPDEVYEILSK 966
            +DL K NM  +Y K+ W WN  +K  EM    A +L+A                                                  DN+    G+   + HFRF  D +E D+         VLY YE+QV P A  RGLG+  MQ+LE++A+R  M K+MLTV KDNE+A++F+TK M++  D+ SP+ W   N  D  Y+ILSK
Sbjct:   10 FDLTKHNMQLLYEKSSWGWNDKKKKDEMTEDKAWYLMA-------------------------------------------------KDNS----GKGVAFSHFRF--DLEEGDE---------VLYCYEIQVEPGARARGLGKFFMQILEMMAHRAEMKKIMLTVLKDNERAINFFTKIMKFQTDETSPAIWDPMNPEDYCYDILSK 153          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: A0A7S3VA27_9STRA (N-alpha-acetyltransferase 40 n=1 Tax=Chaetoceros debilis TaxID=122233 RepID=A0A7S3VA27_9STRA)

HSP 1 Score: 105 bits (263), Expect = 8.270e-22
Identity = 69/207 (33.33%), Postives = 102/207 (49.28%), Query Frame = 1
Query:  346 QVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTKMRYHVDKDSPSKWNQPDEVYEILSK 966
            Q   DL + NM  MY K+ W  N  EK +E+ H  ARFL+    ++D   DGDD D  +   + +R G+G+                      A                               ++VLY+YE+Q++P   R G+G+R MQ+LE++A +  M  VMLTVFK N+ AM+FY K++Y +D+ SPS++    + YEILSK
Sbjct:   91 QPCLDLFRQNMGHMYNKSSWGLNMEEKKKELLHESARFLL----VID---DGDDIDSERLQSSGSRTGIGS----------------------ANDXXXXXXXXXXXXXXXXXXXXXXXXXXQPTQEVLYLYEIQISPVVQRSGMGKRFMQILEIMAMQMKMRSVMLTVFKINQDAMTFYQKLKYDIDESSPSRFGDEAD-YEILSK 267          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: B7FVF1_PHATC (N-alpha-acetyltransferase 40 (Fragment) n=1 Tax=Phaeodactylum tricornutum (strain CCAP 1055/1) TaxID=556484 RepID=B7FVF1_PHATC)

HSP 1 Score: 102 bits (253), Expect = 2.160e-21
Identity = 73/205 (35.61%), Postives = 108/205 (52.68%), Query Frame = 1
Query:  358 DLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYT-KMRYHVDKDSPSKWNQPDEVYEILSKP 969
            +L + NM  MY+ + W  +  +K  E  HR ARF++ +  +   + D  D             G+   P+T         A+T             LA + HFRF +  D+NDD   +     VLY+YE+QVA    R+GLG+++M ++E +     M+K++LTVFK N QAM FYT K+ Y VD+ SPSK+ +  + YEILSKP
Sbjct:   22 NLFRANMGQMYLDSSWGLDMTKKAAEFQHRKARFVLIH-QINSNAEDNHDI------------GISDRPVT---------AST-------------LAAFVHFRFEY--DDNDDPSTI-----VLYIYEIQVAEAYRRKGLGQKLMALMEQIGCAVQMSKILLTVFKKNTQAMQFYTEKLCYGVDESSPSKFGKFAD-YEILSKP 183          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: A0A3S1B7X0_ELYCH (N-alpha-acetyltransferase 40 (Fragment) n=1 Tax=Elysia chlorotica TaxID=188477 RepID=A0A3S1B7X0_ELYCH)

HSP 1 Score: 101 bits (252), Expect = 4.320e-21
Identity = 74/244 (30.33%), Postives = 109/244 (44.67%), Query Frame = 1
Query:  283 RSSAPVRLKIRAPDTLDNGETQVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTK-MRYHVDKDSPSK--WNQPDEVYEILSKPTRQGLSRAASQT 1005
            R+   +  + +   +LD    Q  +DL+K NM  +Y  + W W   EK+ EM    A +LIA            D+D                                          G+   + HFRF  + D            +VLY YE+Q+ P   ++GLG+ MMQ+LEL+AN+  M  VMLTVFK N  A  F+ K ++Y VD+ SP +  +++ D  YEILSK T+ G    A++T
Sbjct:    8 RNGLTIDFETKRVGSLDEKTVQWAFDLVKTNMKSLYETSEWGWKDREKFEEMTEFKAWYLIAR-----------DQD------------------------------------------GKPVAFSHFRFDVEIDM-----------EVLYCYEIQLTPEVRKKGLGKFMMQILELMANKYEMKSVMLTVFKHNNVAHEFFKKKLKYCVDEISPEQGIYDEEDVSYEILSKLTKAGREWVANET 187          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: UPI001F03888D (N-alpha-acetyltransferase 40-like isoform X1 n=2 Tax=Xenia sp. Carnegie-2017 TaxID=2897299 RepID=UPI001F03888D)

HSP 1 Score: 103 bits (257), Expect = 5.770e-21
Identity = 71/215 (33.02%), Postives = 98/215 (45.58%), Query Frame = 1
Query:  355 YDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTKM-RYHVDKDSPSKW---NQPDEVYEILSKPTRQGLS 987
            + L K NM  +Y K+ W WN  +K+ EM+  +A +LIA                                                     A E G+  G  HFRF  D D            +VLY YE+Q+      RGLG+ +MQ+L+LLA+R  M KVM+TVFKDNE+AM F+TK+ ++  D+ SP  +   N  D  YEILS+P  +  S
Sbjct:  132 FQLTKTNMQVLYEKSSWGWNDKKKHEEMSEDNAWYLIA-----------------------------------------------------ADENGKSVGLSHFRFDLDNDV-----------EVLYCYEIQLDKSVRNRGLGKFLMQILQLLAHRYKMKKVMVTVFKDNEKAMDFFTKLLKFENDETSPRYYDPLNPEDYCYEILSRPVSKSSS 282          
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Match: A0A427YIW8_9TREE (N-alpha-acetyltransferase 40 n=1 Tax=Saitozyma podzolica TaxID=1890683 RepID=A0A427YIW8_9TREE)

HSP 1 Score: 103 bits (256), Expect = 6.060e-21
Identity = 78/258 (30.23%), Postives = 114/258 (44.19%), Query Frame = 1
Query:  265 PSDSAARSSAPVRLKIRAPDTLDNGETQVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRDARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSAATAAVPDNAAGERGR------------LAGYCHFRFAWDADENDDGEGVGGKED--VLYVYELQVAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTKMRYHVDKDSPSKWNQPDEVYEILSKPTRQGLSRAA 996
            P  SA     P R+ +     L      V+Y+L   N+  +      A   G K  EM    AR+L+A                 Q++  D  G V T+  +DE       A  A  P + A  +G+            L GYC FRF        D E   G  D  V+Y YELQ+AP A R GLG+ ++  +E++  R+GM K MLT  K+N+ A+SFY K  Y  D+  P++  + +E  ++ S P  +  S+ A
Sbjct:   22 PRRSALHDGRPYRISLVTSSQLSAASEDVLYELFDANISPLSAGTSMAHTPGPKRIEMFDPQARYLLATS-------------LPQSSSLDYGGDV-TVTESDELALAMPGAMPAPAPRSGALGKGKRRAPPVEVTREELLGYCGFRF--------DTEQTAGTRDAEVVYCYELQIAPQARRMGLGKVLIDEMEVIGRRRGMDKAMLTCLKNNDPALSFYAKQGYTPDEIDPTRMEEEEEWEDVGSNPEEEDGSQRA 257          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3290.8824.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7G8W6_ECTSI3.050e-10357.96N-alpha-acetyltransferase 40 n=2 Tax=Ectocarpus Ta... [more]
A0A835YQQ1_9STRA3.130e-2333.65N-alpha-acetyltransferase 40 n=1 Tax=Tribonema min... [more]
A0A7S1ZW93_TRICV6.890e-2234.78N-alpha-acetyltransferase 40 n=1 Tax=Trieres chine... [more]
A0A7M7HMI9_STRPU7.280e-2232.17N-alpha-acetyltransferase 40 n=1 Tax=Strongylocent... [more]
UPI0009E2282E7.820e-2234.13N-alpha-acetyltransferase 40-like n=1 Tax=Orbicell... [more]
A0A7S3VA27_9STRA8.270e-2233.33N-alpha-acetyltransferase 40 n=1 Tax=Chaetoceros d... [more]
B7FVF1_PHATC2.160e-2135.61N-alpha-acetyltransferase 40 (Fragment) n=1 Tax=Ph... [more]
A0A3S1B7X0_ELYCH4.320e-2130.33N-alpha-acetyltransferase 40 (Fragment) n=1 Tax=El... [more]
UPI001F03888D5.770e-2133.02N-alpha-acetyltransferase 40-like isoform X1 n=2 T... [more]
A0A427YIW8_9TREE6.060e-2130.23N-alpha-acetyltransferase 40 n=1 Tax=Saitozyma pod... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3290contigH-paniculata_contig3290:14985..18490 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.6
Seed ortholog evalue3.5e-87
Seed eggNOG ortholog2880.D7G8W6
Preferred nameNAT4
KEGG koko:K20405,ko:K20794
KEGG Pathwayko04150,map04150
Hectar predicted targeting categoryother localisation
GOsGO:0003674,GO:0003824,GO:0004402,GO:0004596,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006325,GO:0006355,GO:0006464,GO:0006473,GO:0006474,GO:0006475,GO:0006807,GO:0006996,GO:0008080,GO:0008150,GO:0008152,GO:0009889,GO:0009987,GO:0010467,GO:0010468,GO:0010485,GO:0010556,GO:0016043,GO:0016407,GO:0016410,GO:0016569,GO:0016570,GO:0016573,GO:0016740,GO:0016746,GO:0016747,GO:0017196,GO:0018193,GO:0018205,GO:0018206,GO:0018393,GO:0018394,GO:0019219,GO:0019222,GO:0019538,GO:0031323,GO:0031326,GO:0031365,GO:0031935,GO:0033043,GO:0033044,GO:0034212,GO:0036211,GO:0043170,GO:0043226,GO:0043227,GO:0043229,GO:0043231,GO:0043412,GO:0043543,GO:0043967,GO:0043968,GO:0043998,GO:0044237,GO:0044238,GO:0044260,GO:0044267,GO:0044424,GO:0044464,GO:0050789,GO:0050794,GO:0051128,GO:0051171,GO:0051252,GO:0051276,GO:0051604,GO:0060255,GO:0060968,GO:0061187,GO:0061733,GO:0065007,GO:0071704,GO:0071840,GO:0080090,GO:1901564,GO:1902275,GO:1903506,GO:1990189,GO:2000112,GO:2001141
EggNOG free text desc.H2A histone acetyltransferase activity
EggNOG OGsKOG2488@1,KOG2488@2759
Ec32 ortholog descriptionAcetyltransferase (GNAT) domain protein
Ec32 orthologEc-15_004510.1
EC2.3.1.257
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000,ko03036
Exons4
Model size1709
Cds size1014
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3290.8824.1prot_H-paniculata_contig3290.8824.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3290 14985..17795 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930015.1927598-CDS-H-paniculata_contig3290:14984..152451622930015.1927598-CDS-H-paniculata_contig3290:14984..15245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 14985..15245 +
1691481110.7308073-CDS-H-paniculata_contig3290:14984..152451691481110.7308073-CDS-H-paniculata_contig3290:14984..15245Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 14985..15245 +
1622930015.2064233-CDS-H-paniculata_contig3290:15838..163841622930015.2064233-CDS-H-paniculata_contig3290:15838..16384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 15839..16384 +
1691481110.7410214-CDS-H-paniculata_contig3290:15838..163841691481110.7410214-CDS-H-paniculata_contig3290:15838..16384Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 15839..16384 +
1622930015.219808-CDS-H-paniculata_contig3290:16883..169661622930015.219808-CDS-H-paniculata_contig3290:16883..16966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 16884..16966 +
1691481110.7511165-CDS-H-paniculata_contig3290:16883..169661691481110.7511165-CDS-H-paniculata_contig3290:16883..16966Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 16884..16966 +
1622930015.2344415-CDS-H-paniculata_contig3290:17671..177951622930015.2344415-CDS-H-paniculata_contig3290:17671..17795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 17672..17795 +
1691481110.7590237-CDS-H-paniculata_contig3290:17671..177951691481110.7590237-CDS-H-paniculata_contig3290:17671..17795Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3290 17672..17795 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622930015.252296-UTR-H-paniculata_contig3290:17795..184901622930015.252296-UTR-H-paniculata_contig3290:17795..18490Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3290 17796..18490 +
1691481110.767158-UTR-H-paniculata_contig3290:17795..184901691481110.767158-UTR-H-paniculata_contig3290:17795..18490Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3290 17796..18490 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3290.8824.1

>prot_H-paniculata_contig3290.8824.1 ID=prot_H-paniculata_contig3290.8824.1|Name=mRNA_H-paniculata_contig3290.8824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=338bp
MPNPKRSKSKGKKFPWATRVAVGDPHSSSPAVRAAEARIKTANSVQDLSL
RLEAFLTIDLPGPETSTGKRKHTLYIERPDAGMLGMGTPSDSAARSSAPV
RLKIRAPDTLDNGETQVMYDLLKGNMHDMYVKAGWAWNKGEKYREMAHRD
ARFLIAYCDLVDGSGDGDDEDQGQTAVTDTRGGVGTLPMTDEQKCKEDSA
ATAAVPDNAAGERGRLAGYCHFRFAWDADENDDGEGVGGKEDVLYVYELQ
VAPWATRRGLGRRMMQVLELLANRQGMTKVMLTVFKDNEQAMSFYTKMRY
HVDKDSPSKWNQPDEVYEILSKPTRQGLSRAASQTAK*
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mRNA from alignment at H-paniculata_contig3290:14985..18490+

Legend: polypeptideCDSUTR
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3290.8824.1 ID=mRNA_H-paniculata_contig3290.8824.1|Name=mRNA_H-paniculata_contig3290.8824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3506bp|location=Sequence derived from alignment at H-paniculata_contig3290:14985..18490+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGAACCCCAAAAGAAGTAAGTCGAAGGGGAAAAAGTTTCCCTGGGC CACCCGGGTCGCCGTCGGTGATCCCCATTCCAGTTCGCCTGCAGTTCGAG CAGCGGAAGCGCGTATCAAGACCGCGAATTCCGTCCAAGATCTATCTTTG AGACTTGAGGCATTCCTCACCATCGACCTGCCGGGACCAGAAACCTCCAC AGGCAAGAGAAAACACACACTATATATAGAACGTCCCGACGCTGGTATGC TGGGGATGGGGGTGACGGGCGTACAGCAACAGCTGTATTTGCTCTAGTAC AGAGCAAAGCAGATCGTTCATCCCGCGTAATTTTACGGTGTGGTGCCCGG GATGGTTGGGTCAGCCCCCCTTGTCTCCACGTCCCTTTCCCCCTCTGCTA CGCACGAAAGTGGTGAGCACTTCCGCTTCCCTCCCCTATTGATTTCCTCG TCTGCGGTGTATTGAGAGGGTGGGAGAGAAACCCTCGAGGGTGTGTAGCG TGTATCTGTCTGTACCGGGCAATACATACGTCCAGACAAAATCATTTATT TTTTGCGAAATTCGTCAGTAGCCCCAACAGAGTGTCATGCGTTGGAAATG AATATGCTGCGAATCAGCTACTGGTCTGTGCATGGTAAGGCAGTATTGAA CCGTTGCGATATCTCTTCGACACCCAAAGGGCAATGCTTAAACCCGTATT TCTTGGTGTGTTGTGTGTACGCGTACGTGCGTACATGTGACTTTCACCCC ACCCCCATCTGCTGGCCATACACACTGCCATTTCTTTGATACTCACTTCC ACAGGGTCAAGCAGTGTTGGATTGACCAGTCGTCTCACGCTCGGCGCCGA CAAGACGCCGAGCGATTCTGCCGCGCGATCGTCGGCACCCGTCCGCTTGA AAATACGAGCGCCGGACACTCTGGACAACGGAGAAACGCAGGTCATGTAC GACCTCCTCAAAGGCAACATGCACGACATGTACGTGAAGGCGGGGTGGGC TTGGAACAAGGGCGAAAAGTATCGGGAAATGGCGCACCGCGACGCCCGAT TTTTGATTGCATATTGCGATCTTGTTGATGGTAGCGGCGATGGTGACGAC GAGGACCAGGGTCAAACCGCCGTGACGGACACTCGAGGAGGTGTGGGCAC GTTACCAATGACAGACGAGCAAAAGTGCAAGGAGGATTCCGCGGCTACAG CGGCGGTGCCCGATAATGCAGCGGGAGAAAGGGGGCGATTGGCGGGATAT TGCCACTTTCGCTTTGCGTGGGATGCCGATGAGAACGACGACGGGGAAGG GGTAGGGGGAAAGGAAGACGTGCTGTATGTGTACGAGCTACAGGTGGCTC CCTGGGCGACGCGGAGGGGCCTCGGCCGGCGGATGATGCAAGTGCTTGAG GTGGGAGCACGTTGAAATATGGGCTGCAGGGGGGAGGAATGTTCTCATGC GTTGTATGCGTTAGCTGGCAGGCCGTTGGCTGCTCATTCTCTTGAGGACG GAGCGTTGTCCCTTGCAAACGATGATCGGCGCGCACGCGAGGGTGGCGCG GGGAGAGGGGAGATAACAACGCTTCATTGGGTCAAATGTTGGGACGCGTG GAGACATCTTGTAACGAAAAAGGCAGCAGCTACATTTCGCGCAAGTCTAT GATTTAAAAACAAAAAATGATGGGGGGGAGAAAGCTTAGCGACGGTTTAG AAACAGGTTTGAAATTACGAAGTAACAGAGTGTGTGTTGTTGACGGGACG AGCAGTCTTCCTACCGACATTTTACTCGATTTGTTTGCTTTGTGCCTCAG CTTACACATCAAATATGTCCTCAACTGTAAGTATGCAGTTGATTCTTTAA GTTTGGCGTGCTCGTGCTCATCCGCGCTTTTCGCCGTTGGAAATCACAGC TTCTGGCGAATCGGCAGGGGATGACTAAGGTGATGCTTACGGTGTTCAAG GACAACGAGCAGGCGATGTCATTCTACACCAAGTGAGCTCTCGATAGACT GATCATACTTTTGTAGTCGCCGTACACAACCCTCGGTTTCACCGTAAGAG GGCTTGTCTTTACTCTTCGAACAGGGGTAAGAAATTAGGTGAGAAAGGAC AAGCTACAAGCAGATAATAATTATTTGTTGTGTCTGGTTGGCGCAGCGTC AAGATGAGAAATTTCGAGCAAATTATTTTTCTATGCTCGTAATTTCTCAC TTCAAACATTTTTCCTCGTTCCTGGTTTGGGGGGTTCAGACACGACCTGA GAGCACCAGGGAGTCGTTCGTATATAGTATCGTCAACGTTTGTGTTGTTT CTATGTTGTATATGTGCACGGTATGACGATAATGGTCGTTCAGCTCGTTC CTCTCTCCCCCCCCCCCCCCCCCTCTTTTGGCCATGTTTCCTGCTGCCCA TTGAATCAAGATGGTCACAGACACGCCCAATTTAGCTGGCGGCCGTGCTG CGTTCCGATTGTTTTCTTGGTAATCACCAGTAAATCTTGGTGGTGCCCCT CTTGCGTAGTCTATCGCGCTTCGCTTCCGTTTTCCCTTTCCTATTCGTTC CGTTCCGTTCCGTTTCGGTTTCGGTTTGTTTTATCCCTCTTCGTTTCGGT TTGTTTCCTTCCTTCCTGTTCCGTTCGTCTTCTTTCGACTCCTTCCGTTT CACTTCGTTTCGCTCACAAACTCACCCACCCACGCAGGATGCGGTATCAT GTCGACAAAGACTCACCGTCGAAGTGGAATCAACCAGACGAAGTGTACGA GATTCTCAGCAAGCCCACTCGGCAAGGGTTGTCGAGGGCCGCATCTCAAA CGGCAAAGTAGTAAGGAATGGCGACTTGACGGCGTGCCTACTAGTGTCCT GTCGGAGGGCGAGTTTGCTCATAGCTCGGTCGCGGACATGAGCTTTTTAT TTTACCCCCCGATTTATTGCTATTTTCGTTTTTTAATCGAGTGAAACCAA AGTATCGACATTCAGTAAACGTCTGATATGAAAGCGATCAGATTTTGCCA GTTCGCTGAGAAGTATTATTTTTCGCATCGGAGTTTGGGGTGTTTCACCT GCGGGTTGTTTTTGTGTATCGGCTCGTTTCGATGTGTGTCTTGTTTGAAA AAAAGACTAACGCTTTCGGCTTTCTTCATTGATAGCAATCGGGGTAAACT CTGCTCGTCTCTTACTAATTCATTATAAGGAATCAAGCTATGGTGGTATT TTATTTTATTCAAGTTTTCAGTAGATTTGGGTACTAGTACCAGCCAGTGC GTTGAGCCTACGGGATTCGGACACAACGGTGTGATGCCTGCCTGCAGCCC TAATGCGCGGAATGCGTTTCTTGCTTCGTTTGTTTTGCGATACATTGAAC GATTAGACCGCCGCTGAATCAAATCCCGTTTTGGTCGTAGGAGACTTGAA TGAGGTGGGAGCTCCACGGACCTACGCCCGAACGGGTAGGGTAGCTCGTG TACTGAGCATGACTGGAAGTCTAGTCAGAGGTCTTTTAGTAGGTGAAACT CCTACA
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Coding sequence (CDS) from alignment at H-paniculata_contig3290:14985..18490+

>mRNA_H-paniculata_contig3290.8824.1 ID=mRNA_H-paniculata_contig3290.8824.1|Name=mRNA_H-paniculata_contig3290.8824.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2028bp|location=Sequence derived from alignment at H-paniculata_contig3290:14985..18490+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGCCGAACCCCAAAAGAAGTAAGTCGAAGGGGAAAAAGTTTCCCTGGGC
CACCCGGGTCGCCGTCGGTGATCCCCATTCCAGTTCGCCTGCAGTTCGAG
CAGCGGAAGCGCGTATCAAGACCGCGAATTCCGTCCAAGATCTATCTTTG
AGACTTGAGGCATTCCTCACCATCGACCTGCCGGGACCAGAAACCTCCAC
AGGCAAGAGAAAACACACACTATATATAGAACGTCCCGACGCTGGTATGC
TGGGGATGGGGATGCCGAACCCCAAAAGAAGTAAGTCGAAGGGGAAAAAG
TTTCCCTGGGCCACCCGGGTCGCCGTCGGTGATCCCCATTCCAGTTCGCC
TGCAGTTCGAGCAGCGGAAGCGCGTATCAAGACCGCGAATTCCGTCCAAG
ATCTATCTTTGAGACTTGAGGCATTCCTCACCATCGACCTGCCGGGACCA
GAAACCTCCACAGGCAAGAGAAAACACACACTATATATAGAACGTCCCGA
CGCTGGTATGCTGGGGATGGGGACGCCGAGCGATTCTGCCGCGCGATCGT
CGGCACCCGTCCGCTTGAAAATACGAGCGCCGGACACTCTGGACAACGGA
GAAACGCAGGTCATGTACGACCTCCTCAAAGGCAACATGCACGACATGTA
CGTGAAGGCGGGGTGGGCTTGGAACAAGGGCGAAAAGTATCGGGAAATGG
CGCACCGCGACGCCCGATTTTTGATTGCATATTGCGATCTTGTTGATGGT
AGCGGCGATGGTGACGACGAGGACCAGGGTCAAACCGCCGTGACGGACAC
TCGAGGAGGTGTGGGCACGTTACCAATGACAGACGAGCAAAAGTGCAAGG
AGGATTCCGCGGCTACAGCGGCGGTGCCCGATAATGCAGCGGGAGAAAGG
GGGCGATTGGCGGGATATTGCCACTTTCGCTTTGCGTGGGATGCCGATGA
GAACGACGACGGGGAAGGGGTAGGGGGAAAGGAAGACGTGCTGTATGTGT
ACGAGCTACAGGTGGCTCCCTGGGCGACGCGGAGGGGCCTCGGCCGGCGG
ATGATGCAAGTGCTTGAGACGCCGAGCGATTCTGCCGCGCGATCGTCGGC
ACCCGTCCGCTTGAAAATACGAGCGCCGGACACTCTGGACAACGGAGAAA
CGCAGGTCATGTACGACCTCCTCAAAGGCAACATGCACGACATGTACGTG
AAGGCGGGGTGGGCTTGGAACAAGGGCGAAAAGTATCGGGAAATGGCGCA
CCGCGACGCCCGATTTTTGATTGCATATTGCGATCTTGTTGATGGTAGCG
GCGATGGTGACGACGAGGACCAGGGTCAAACCGCCGTGACGGACACTCGA
GGAGGTGTGGGCACGTTACCAATGACAGACGAGCAAAAGTGCAAGGAGGA
TTCCGCGGCTACAGCGGCGGTGCCCGATAATGCAGCGGGAGAAAGGGGGC
GATTGGCGGGATATTGCCACTTTCGCTTTGCGTGGGATGCCGATGAGAAC
GACGACGGGGAAGGGGTAGGGGGAAAGGAAGACGTGCTGTATGTGTACGA
GCTACAGGTGGCTCCCTGGGCGACGCGGAGGGGCCTCGGCCGGCGGATGA
TGCAAGTGCTTGAGCTTCTGGCGAATCGGCAGGGGATGACTAAGGTGATG
CTTACGGTGTTCAAGGACAACGAGCAGGCGATGTCATTCTACACCAACTT
CTGGCGAATCGGCAGGGGATGACTAAGGTGATGCTTACGGTGTTCAAGGA
CAACGAGCAGGCGATGTCATTCTACACCAAGATGCGGTATCATGTCGACA
AAGACTCACCGTCGAAGTGGAATCAACCAGACGAAGTGTACGAGATTCTC
AGCAAGCCCACTCGGCAAGGGTTGTCGAGGGCCGCATCTCAAACGGCAAA
GTAGGATGCGGTATCATGTCGACAAAGACTCACCGTCGAAGTGGAATCAA
CCAGACGAAGTGTACGAGATTCTCAGCAAGCCCACTCGGCAAGGGTTGTC
GAGGGCCGCATCTCAAACGGCAAAGTAG
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