mRNA_H-paniculata_contig3288.8818.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: D8LCC5_ECTSI (Deubiquitinating enzyme A n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LCC5_ECTSI) HSP 1 Score: 288 bits (736), Expect = 2.750e-86 Identity = 170/267 (63.67%), Postives = 188/267 (70.41%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPII----VAREAARPS--------TLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSNLNSLEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SEAHFFEP+VEGD A F+ YL +KR NAVWGDD EV+ALCEIYDRPAEIWAYD QLGAKTLRTFHEAAGS G MRLSYYGGGHYDSV+P+ + +AA P+ V PAPEPG LEE ALERS+ RAA G G WD EMK R+ + + A MDHALA SRNVFEAQ DDLDSALV SVD ME+SNL+SLEAA+RDSEL VLQEEMLRTAQAQSEEEQLR+ALEAS
Sbjct: 378 ESEAHFFEPYVEGDMAAFLRYLEVKRQNAVWGDDPEVQALCEIYDRPAEIWAYDPQLGAKTLRTFHEAAGSAGGRHGSPRPP---MRLSYYGGGHYDSVAPLDSQPPLVGDAAGPAGXXXXXXXXXXXXXXXXXXXXXXXDAVSPAPEPGQLEEAALERSKIRAAEVGSGRWDLEEMK-MRKDDENSPAGRAAMDHALAWSRNVFEAQFDDLDSALVASVDHMEQSNLSSLEAASRDSELVVLQEEMLRTAQAQSEEEQLRNALEAS 640
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: A0A8K1FMD0_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1FMD0_PYTOL) HSP 1 Score: 141 bits (355), Expect = 2.230e-33 Identity = 94/260 (36.15%), Postives = 143/260 (55.00%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAG-DGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSNLNS----LEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD +DF+ YL KR + VWGDD E++A+CE+YDRPAE++AYD G + LRTFHE + + LSYYGGGHYDS+ G + VA +++ P G E+ +E SRR G G + + RE +++ A ++H L +SRN F+A LD +L +++ + E + ++S L+ A ++SE+A +Q E+L A+ +SEEE +R A+ AS
Sbjct: 263 ESEKEYFEPYVVGDMSDFLRYLEHKRRDGVWGDDPEIQAMCELYDRPAEVFAYDPVNGCRKLRTFHENRSLSRSRPS--------ICLSYYGGGHYDSL----------------------VGPNHVANIIQETP--GEWEQRHIEYSRRINTREGATGVLQRVQAASDRE-----STEVAQLEHILMVSRNEFDAMHSSLDESLKLTLAESEATAVHSEQRALDVATQESEMAAIQAELLEKARQESEEELMRKAIVAS 485
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: W2LIN5_PHYPR (Deubiquitinating enzyme A n=12 Tax=Phytophthora TaxID=4783 RepID=W2LIN5_PHYPR) HSP 1 Score: 137 bits (346), Expect = 3.790e-32 Identity = 95/262 (36.26%), Postives = 136/262 (51.91%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSN-------LNSLEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD A FM YLR KR + VWGDD E++ALCE+YDRPAE++AYD Q G + LR FHE + +RLSYYGGGHYDS+ G A ++ PG E+ + S R + E + Q + + T E L + L SRN F+A D L+ L +S+ + +++ +E A R+SE+A +Q E+L A+A+SEEEQ++ A++AS
Sbjct: 259 ESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQQGFRKLRCFHENSALAR--------TRPPIRLSYYGGGHYDSL----------------------VGPDHQANLIRE--RPGQWEQRHIGYSHRINSRETRNDVSGVEQEVQAQSDRERTEVEQL-EQVLVQSRNEFDAMDKSLEETLKLSLVEYGEASPAQAHREREEIEEATRESEMAAIQAELLAKAKAESEEEQMKSAIQAS 487
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: G4Z036_PHYSP (Deubiquitinating enzyme A n=6 Tax=Phytophthora TaxID=4783 RepID=G4Z036_PHYSP) HSP 1 Score: 136 bits (343), Expect = 8.670e-32 Identity = 95/263 (36.12%), Postives = 135/263 (51.33%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDD--------MEKSNLNSLEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD A FM YLR KR + VWGDD E++ALCE+YDRPAE++AYD G + LR FHE + + +RLSYYGGGHYDS+ G A ++ P G E+ +E S R + E + Q + + T E L + L SRN F+A D L+ L +S+ + + N +E A R+SE+A +Q E+L A+A+SEEE ++ A++AS
Sbjct: 242 ESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPVQGFRKLRCFHENSALSRSRPP--------IRLSYYGGGHYDSL----------------------VGADHAANLIRETP--GQWEQRHIEYSHRINSRETHDDVAGVEQQVQAQSDRERTEVEQL-EQILMQSRNEFDAMDASLEETLKLSLAEHGGEASPALANRERNDIEEATRESEMAAIQAELLAKAKAESEEEHMKTAIQAS 471
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: K3WER0_GLOUD (Deubiquitinating enzyme A n=1 Tax=Globisporangium ultimum (strain ATCC 200006 / CBS 805.95 / DAOM BR144) TaxID=431595 RepID=K3WER0_GLOUD) HSP 1 Score: 136 bits (343), Expect = 1.440e-31 Identity = 93/264 (35.23%), Postives = 138/264 (52.27%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSNLNS---------LEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD F+ YL KR VWGDD E++A+CE+YDRPAE++AYD G + LRTFHE++G + + LSYYGGGHYDS+ + + R +P PG E LE SRR D S + Q E + T++ A ++ L LSRN F+ + +LD L +S+++ E SN + ++ A R+SE+ +Q +++ A+ SEEE ++ A+EAS
Sbjct: 294 ESEKEYFEPYVVGDMEAFLRYLNYKRRQGVWGDDPELQAMCELYDRPAEVYAYDPVHGFRKLRTFHESSGLSRNRPP--------ICLSYYGGGHYDSLVGMNHSENCIR---------------------DP---PGEWERRHLEYSRRINTREQDDSTSEVARQVQAESD-RETTEMAQLEQTLLLSRNEFDGMNSNLDETLKLSLEEYENSNAATASVGTSDAQIQEAKRESEMTAIQADLIAKAKQASEEELMKKAIEAS 524
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: A0A5D6YD11_9STRA (Deubiquitinating enzyme A n=1 Tax=Pythium brassicum TaxID=1485010 RepID=A0A5D6YD11_9STRA) HSP 1 Score: 136 bits (342), Expect = 3.750e-31 Identity = 94/275 (34.18%), Postives = 134/275 (48.73%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSN--------------------LNSLEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD A F+ YL KR VWGDD E++A+CE+YDRPAE++AYD G + LRTFHE++G + +RLSYYGGGHYDS+ G A + AP G E +E SRR D + DA + T++ A ++ L LSR F+ D LD L +S+++ E+S L A R+SE+A +Q +++ + SEEE ++ A+EAS
Sbjct: 516 ESEKEYFEPYVVGDMAAFVRYLNYKRRAGVWGDDPELQAMCELYDRPAEVYAYDPAHGFRKLRTFHESSGVSRSRPP--------IRLSYYGGGHYDSL----------------------VGLDHAANCIRDAP--GEWERRHIEYSRRINTRDRDDAADADVALEVAAESDRETTEMAQLEQMLLLSRTEFDGMDSSLDDTLKLSLEEYERSGGAEAAASGGAGAGDVAVEREQQELRDATRESEMAAIQADLIAKVKQASEEEMVKKAIEAS 758
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: A0A8J5J3G2_9STRA (OTU domain-containing protein n=1 Tax=Phytophthora aleatoria TaxID=2496075 RepID=A0A8J5J3G2_9STRA) HSP 1 Score: 135 bits (340), Expect = 6.310e-31 Identity = 96/263 (36.50%), Postives = 135/263 (51.33%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDD--------MEKSNLNSLEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD A FM YL KR + VWGDD E++ALCE+YDRPAE++AYD Q G + LR FHE + + +RLSYYGGGHYDS+ VG QS + +PG E+ + S R + E + Q + + T E L + L SRN F+A D L+ L +S+ + +E A R+SE+A +Q E+L A+A+SEEEQ++ A++AS
Sbjct: 473 ESEKEYFEPYVVGDMAAFMRYLSYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQQGFRKLRCFHENSALSR--------TRPPIRLSYYGGGHYDSL-------------------VGTDHQSNLI-----REDPGQWEQRHIGYSHRINSRETRSDVSGVEQEVQTQSDRERTEVEQL-EQVLMQSRNEFDAMDRSLEDTLKLSLAEHGGEASPAQAHREREEMEEATRESEMAAIQAELLAKAKAESEEEQMKSAIQAS 702
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: A0A0P1AKP3_PLAHL (Deubiquitinating enzyme A n=1 Tax=Plasmopara halstedii TaxID=4781 RepID=A0A0P1AKP3_PLAHL) HSP 1 Score: 135 bits (340), Expect = 6.370e-31 Identity = 99/265 (37.36%), Postives = 140/265 (52.83%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRRAALAGDGSWDAPEMKNQR---EGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSN-------LNSLEAAARDSELAVLQEEMLRTAQAQSEEEQLRHALEAS 771
+SE +FEP+V GD A FM YLR KR + VWGDD E++ALCE+YDRPAE++AYD Q G + LR FHE +G +RLSYYGGGHYDS+ VG Q + + PG E+ + S R + + S D P + Q+ + + T E L + L SRN F+A D L+ L +S+ + E+ + +E A R+SE+A +Q E+L A+ +SEEEQ+ A++AS
Sbjct: 475 ESEKEYFEPYVVGDMAAFMRYLRYKRRDGVWGDDPELQALCELYDRPAEVFAYDPQNGFRKLRCFHENSGLARSRPP--------IRLSYYGGGHYDSL-------------------VGPDHQVNLVNEI-----PGQWEQRHIGYSYR--INSRENSNDTPGGEGQKVQIQSEHERTEVEQL-EQVLVQSRNEFDAMDKSLEETLNLSLAEHEEKSKAQVXXXXXEVEEATRESEIAAIQAELLAKAKEESEEEQMNSAIQAS 704
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: A0A835YK15_9STRA (Deubiquitinating enzyme A n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YK15_9STRA) HSP 1 Score: 134 bits (336), Expect = 1.740e-30 Identity = 113/260 (43.46%), Postives = 140/260 (53.85%), Query Frame = 1
Query: 7 QSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLE---------VEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXX-----------MRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSR-RRAALAGDGSWDAPEMKNQREGGGKNTSDEALMDHALALSRNVFEAQDDDLDSALVVSVDDMEKSNLNSLEAAARDSELAVLQEEMLRTA 723
++E +FEP+VEG F Y+ KR NAVWGDD E V+ALCEIYD AEIWAYDA+ GA+ LRTFHEA G + G XXXXXXXX MRLSYYGGGHYDS+ P+ A AG G +L AGV+ PG LE ALERSR RRA G + A+++ AL SR+ F+AQ L+ AL S+ +++ + AA SEL +QEEML +A
Sbjct: 302 EAERAYFEPYVEGGVEGFAAYVEWKRQNAVWGDDPEXXXXXXXXXVQALCEIYDCAAEIWAYDARNGARMLRTFHEATGDSIGNGGXXXXXXXXXXXXXXSAVRVMRLSYYGGGHYDSLVPM----------EWACAG-GYYEGALYAGVM-----PGVLEAMALERSRARRAQXXXXXXXXXXXXXXXXXGAADRVGETAIVELALQQSRDEFDAQPGALEQALAASLSLTDETA--DVAAATSASELLAMQEEMLASA 543
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Match: A0A4D9CTV9_9STRA (Deubiquitinating enzyme A n=2 Tax=Monodopsidaceae TaxID=425072 RepID=A0A4D9CTV9_9STRA) HSP 1 Score: 132 bits (331), Expect = 9.960e-30 Identity = 77/169 (45.56%), Postives = 97/169 (57.40%), Query Frame = 1
Query: 13 EAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAEIWAYDAQLGAKTLRTFHEAAGSTAGXXXXXXXXXXXMRLSYYGGGHYDSVSPIIVAREAARPSTLAVAGVGRAGQSLVAGVVEPAPEPGWLEEEALERSRRR-AALAGDGSWDAPEMKNQRE 516
E +FEP+V G ++F+ YL +KR + VWGDD EV+ALCE+YDRPAEIWA+DA GAK LRTFHEA+G T MRLSYYGGGHYDS+ + GR G G V PG +E ALE +R+R AA G G++ E K + +
Sbjct: 436 ERQYFEPYVVGGMSEFLRYLELKRRDGVWGDDPEVQALCEMYDRPAEIWAFDAAEGAKKLRTFHEASGFTG--RSMALGGSAPMRLSYYGGGHYDSLVRV----------------GGRDGGEAGGGEV-----PGMVENRALEMARQRQAASTGRGAFGIEESKQRSD 581 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3288.8818.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3288.8818.1 >prot_H-paniculata_contig3288.8818.1 ID=prot_H-paniculata_contig3288.8818.1|Name=mRNA_H-paniculata_contig3288.8818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=401bp HAQSEAHFFEPFVEGDRADFMNYLRIKRHNAVWGDDLEVEALCEIYDRPAback to top mRNA from alignment at H-paniculata_contig3288:546..8780+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3288.8818.1 ID=mRNA_H-paniculata_contig3288.8818.1|Name=mRNA_H-paniculata_contig3288.8818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8235bp|location=Sequence derived from alignment at H-paniculata_contig3288:546..8780+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3288:546..8780+ >mRNA_H-paniculata_contig3288.8818.1 ID=mRNA_H-paniculata_contig3288.8818.1|Name=mRNA_H-paniculata_contig3288.8818.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2406bp|location=Sequence derived from alignment at H-paniculata_contig3288:546..8780+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |