mRNA_H-paniculata_contig328.8797.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A8J9WQU6_9CHLO (Uncharacterized protein n=1 Tax=Coccomyxa sp. Obi TaxID=2315456 RepID=A0A8J9WQU6_9CHLO) HSP 1 Score: 91.3 bits (225), Expect = 1.190e-18 Identity = 59/151 (39.07%), Postives = 85/151 (56.29%), Query Frame = 1
Query: 178 MPKSFIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMD-YLVLPVANHFMKG-VKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDK-PTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARS-EDGTFVSIEGL 618
M + +YH++ + W H ++ Y P Y ++GF+H + D +L VAN+F V +++CLRIDP+ + SEV+YE P APVGD P + +EG E +FPH+YG I+ AV AE V R + GTFVSIEG+
Sbjct: 1 MMATSLYHLVPKDNWLEHKQSRKP-YFPPTYDQDGFIHLTEDPNFLLGVANNFYSSKVPWEWICLRIDPKSLTSEVRYE------------PAAPVGDTAPPTGWKEGAA---EAPVFPHLYGTIDFNAVTAEHAVTRHPQTGTFVSIEGV 135
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A7S2TE52_9EUKA (Hypothetical protein n=1 Tax=Lotharella oceanica TaxID=641309 RepID=A0A7S2TE52_9EUKA) HSP 1 Score: 87.4 bits (215), Expect = 2.460e-17 Identity = 55/146 (37.67%), Postives = 78/146 (53.42%), Query Frame = 1
Query: 184 KSFIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMDY-LVLPVANHFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTFVSIEGL 618
+ IYHMLE+ W A Y P Y ++GF H + + ++ +AN F K K ++VC+ ID +K+EVK+E+ APVG+K +G+ E + VLFPHIYGPI VV + R + G F+SIEGL
Sbjct: 5 QEIIYHMLEKKEW---AACEGKEYYPKTYKQDGFTHATGEAKFLIKIANMFYKESKEEWVCIAIDTNKLKAEVKWEAP------------APVGNK------KGDESEPK-VLFPHIYGPILHAEVVKVYPIVRCDKGEFLSIEGL 128
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A3D1EN72_9GAMM (DUF952 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TaxID=1913989 RepID=A0A3D1EN72_9GAMM) HSP 1 Score: 87.4 bits (215), Expect = 6.860e-17 Identity = 59/147 (40.14%), Postives = 82/147 (55.78%), Query Frame = 1
Query: 190 FIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMD-YLVLPVANHFMKGVKGKFVCLRIDPELVKS---EVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTFVSIEGL 618
+I+H+++ W A+A ++ Y P Y +GF H + + +L VANHF K VKG++ CLR+ E ++ E ++E APVGDK + EG + E LFPHI G I AV+ E V RSEDGTF+SIEGL
Sbjct: 38 YIFHLIQAEYWDA-AKADNSVYFPPTYDADGFTHGTANPEKLLVVANHFYKDVKGEWYCLRMTLESLQGTGVETRFEG------------TAPVGDK--QPDFEGSQDE----LFPHILGGIAPRAVLVEHPVIRSEDGTFLSIEGL 165
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A1Z8R0K2_9GAMM (DUF952 domain-containing protein n=1 Tax=Gammaproteobacteria bacterium TMED30 TaxID=1986759 RepID=A0A1Z8R0K2_9GAMM) HSP 1 Score: 81.6 bits (200), Expect = 8.000e-15 Identity = 48/147 (32.65%), Postives = 74/147 (50.34%), Query Frame = 1
Query: 190 FIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMD-YLVLPVANHFMKGVKGKFVCLRIDPELVKS---EVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTFVSIEGL 618
+++H+++ W Y P Y ++GF H + + +L VANHF +GV G ++CLR+ + +++ E +E APVGDKP E E L+PHI G I AV++ V R+ DG F+SIEG+
Sbjct: 36 YVFHLIQADLWEAAKTTPDRIYYPPTYQQDGFTHGTANPEKLLTVANHFYQGVVGDWLCLRMSVDSLRATGVETIFEG------------TAPVGDKPADFEGSNEE------LYPHILGGISPDAVISTHKVIRTNDGEFISIEGV 164
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A7V7ZNC4_9CHLR (DUF952 domain-containing protein n=1 Tax=Chloroflexia bacterium SDU3-3 TaxID=2651839 RepID=A0A7V7ZNC4_9CHLR) HSP 1 Score: 75.1 bits (183), Expect = 5.230e-13 Identity = 47/140 (33.57%), Postives = 64/140 (45.71%), Query Frame = 1
Query: 193 IYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSM-DYLVLPVANHFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTFVSI 609
I+HM RWR + YLPA Y +GF+HC+ + L+L VAN F + G FV L I+ +L+ + V++E A+ FPHIYGPI AVVAE + R G F+ I
Sbjct: 4 IFHMAPAERWRTWPQGQD--YLPAEYAADGFIHCTRGEELMLQVANSFYRAQPGDFVLLVIEADLLAAPVRWERSADHLAAE----------------------------FPHIYGPINRAAVVAERLMLRDTSGDFIGI 113
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A7X8UM47_9BACT (DUF952 domain-containing protein n=1 Tax=Planctomycetes bacterium TaxID=2026780 RepID=A0A7X8UM47_9BACT) HSP 1 Score: 73.2 bits (178), Expect = 3.300e-12 Identity = 48/137 (35.04%), Postives = 61/137 (44.53%), Query Frame = 1
Query: 190 FIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMDYLVLPVANHFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTF 600
I H+ + W ++GS Y P + GFVHCS V+ VAN +G G V L IDP +K+ VKYE+ +E LFPHIYGP+ +GAVV L A DGTF
Sbjct: 1 MILHIASKAEWHKAIDSGS--YQPPSLKSAGFVHCSTAQQVIAVANSNFRGKAG-LVLLCIDPSRLKASVKYEN-----------------------------LEGGTSLFPHIYGPVNTGAVVEILDFAVQSDGTF 105
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A838GDT8_9CHLR (DUF952 domain-containing protein n=1 Tax=Chloroflexia bacterium TaxID=2448782 RepID=A0A838GDT8_9CHLR) HSP 1 Score: 72.0 bits (175), Expect = 7.920e-12 Identity = 45/141 (31.91%), Postives = 68/141 (48.23%), Query Frame = 1
Query: 196 YHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCS--MDYLVLPVANHFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTFVSIE 612
YH++ W A + Y P AY ++GF+HC+ +D LV VAN F + +F L +D + S+++Y+ E LFPHIYGP+ + AV+ E V+RS+DGTF+SI+
Sbjct: 17 YHLVPAPVWE--AAKSAEWYTPEAYADDGFIHCTNGIDQLV-EVANMFYRPDGREFRVLVLDVARITSDLRYDD--------------------------------EAQLFPHIYGPLNTSAVIGEFAVSRSDDGTFLSID 122
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: R1F9Q8_EMIHU (Uncharacterized protein n=2 Tax=Emiliania huxleyi TaxID=2903 RepID=R1F9Q8_EMIHU) HSP 1 Score: 72.4 bits (176), Expect = 8.760e-12 Identity = 51/155 (32.90%), Postives = 72/155 (46.45%), Query Frame = 1
Query: 187 SFIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMDY-LVLPVAN-------HFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPI-ESGAVVAELTVARS-EDGTFVSIEGLC 621
S IYH++++ W A A Y P Y EGF+H + + L+L V N K ++G F+CL ID ++ S VK E+ P P P+ FPHI+GPI V ++ V R +DGTF+SIEG+C
Sbjct: 10 SVIYHVVQKSLWDA-ALASGVNYFPPRYDIEGFIHATHEANLLLGVLNWRHPKHGFIYKHIEGTFLCLAIDTAVLTSPVKMEAA------------VPTESNPN------------PIAFPHIFGPILPLSCVTRQMEVVRDPQDGTFLSIEGIC 139
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: A0A3N5SDF5_9CHLR (DUF952 domain-containing protein n=1 Tax=Chloroflexi bacterium TaxID=2026724 RepID=A0A3N5SDF5_9CHLR) HSP 1 Score: 71.6 bits (174), Expect = 9.830e-12 Identity = 46/135 (34.07%), Postives = 61/135 (45.19%), Query Frame = 1
Query: 190 FIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMDYLVLPVANHFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDG 594
IYH+ WR + G Y + EGF+HCS D VLPVA + G + V L+IDP + E+K+E P G P EGE LFPH+YGPI+ A+V + + DG
Sbjct: 1 MIYHITSRRAWREAQQRGD--YRAESLETEGFIHCSTDVQVLPVAEKYYPGQRNLLV-LKIDPARLSPELKWEP--------------PSGGAPPPGVAEGE-------LFPHVYGPIDLDAIVKIFDLETNADG 111
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Match: UPI0006E2608A (DUF952 domain-containing protein n=1 Tax=Streptacidiphilus griseoplanus TaxID=66896 RepID=UPI0006E2608A) HSP 1 Score: 71.6 bits (174), Expect = 1.010e-11 Identity = 49/141 (34.75%), Postives = 64/141 (45.39%), Query Frame = 1
Query: 190 FIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMDY-LVLPVANHFMKGVKGKFVCLRIDPELVKSEVKYESGRSKSWAKYGKPIAPVGDKPTSTEEEGERIEKEPVLFPHIYGPIESGAVVAELTVARSEDGTFVSI 609
I H+ W EA Y A+ EGF+HCS D L VAN F + V G + L ID +++ S V++E AP G P ++ VLFPHIYG + GAVV L V R DG + S+
Sbjct: 1 MILHLAPLDDW---LEAPDRPYAAASLATEGFIHCSPDERTALAVANAFFQEVHGPLMVLLIDEDVLDSAVRWE--------------APSGPPPAGAADD--------VLFPHIYGSVNRGAVVGMLEVRRGADGRWASM 116 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig328.8797.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig328.8797.1 >prot_H-paniculata_contig328.8797.1 ID=prot_H-paniculata_contig328.8797.1|Name=mRNA_H-paniculata_contig328.8797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=149bp MPKSFIYHMLEEGRWRPHAEAGSAGYLPAAYVEEGFVHCSMDYLVLPVANback to top mRNA from alignment at H-paniculata_contig328:11354..13875+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig328.8797.1 ID=mRNA_H-paniculata_contig328.8797.1|Name=mRNA_H-paniculata_contig328.8797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2522bp|location=Sequence derived from alignment at H-paniculata_contig328:11354..13875+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig328:11354..13875+ >mRNA_H-paniculata_contig328.8797.1 ID=mRNA_H-paniculata_contig328.8797.1|Name=mRNA_H-paniculata_contig328.8797.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=894bp|location=Sequence derived from alignment at H-paniculata_contig328:11354..13875+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |