mRNA_H-paniculata_contig3269.8774.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview


Name	mRNA_H-paniculata_contig3269.8774.1
Unique Name	mRNA_H-paniculata_contig3269.8774.1
Type	mRNA
Organism	Halopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)

Homology

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A6H5J5Q6_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5J5Q6_9PHAE)

HSP 1 Score: 255 bits (651), Expect = 4.490e-74
Identity = 162/360 (45.00%), Postives = 213/360 (59.17%), Query Frame = 1

Query:  268 VPEDVTSLLQGLYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKI--GDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGS-NKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGLVVARSFKSEHLL------------------RTNRTEASSETDDVEAAADKXXXXXEVDEITPVRRFCPEPDAIESLVEGESEALLIVPKLREGDHLTGRNSTDLDLEDSTNATVGDSSPQQKIPKEITAVTLRDAA-ARAALSRNTTVILPGSYNPLHRGHLRLLQEAQAL-QAETSRGSRK 1278
            VP+D ++L++ +Y S P P+VC+ST G+GGQA+SW+L VPGASACLLEA+VPYC  A ++++  G   P    YCS E AE LAR AY RAV L V  S ++GPH   +  V+ VGCTA V SS+P++G H+CYVCAQT DG+AHYEL+L+KGRRDR+ ED AVSR+++QA A+A G+ V   FK++HLL                     R EA++   + EA            E+ P      +PDAIE LV G     L+VP+               D   +TN      +P          V LR+ A  RAAL R  TVILPGSYNPLHRGH+ LL+ A++L  AE +  SR+
Sbjct:  124 VPDDASALIRAVYDSKPTPQVCVSTAGAGGQAISWLLGVPGASACLLEATVPYCFKAFEDRMAAGSRAP---GYCSREAAEGLARKAYARAVSLCVAESPDRGPHVLPDRRVIAVGCTAAVLSSKPRRGPHQCYVCAQTADGLAHYELTLSKGRRDRSGEDAAVSRLLLQAIADAVGVPVPFGFKADHLLLDGGGGGDLPSVHEEEGVEAGRGEATAAAGEAEAVVSA--------EVVPTADLAHDPDAIEELVAGRCGTALVVPR---------------DTRGATNEAGEAGAP---------VVVLREGAMVRAALLRGATVILPGSYNPLHRGHVGLLEAARSLLDAEINGESRR 448

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A7S2DDP4_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2DDP4_9STRA)

HSP 1 Score: 134 bits (336), Expect = 1.210e-30
Identity = 102/328 (31.10%), Postives = 153/328 (46.65%), Query Frame = 1

Query:  268 VPEDVTSLLQGLYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGLVVARSFKSEHLLRTNRTEASSETDDVEAAADKXXXXXEVDEITPVRRFCPEPDAIESLVEGESEALLIVPKLREGDHLTGRNSTDLDLEDSTNAT---VGDSSPQQKIPKEITAVTLRDAAARAALSRNTTVILPGSYNPLHRGHLRLLQEAQ 1242
            VP DVT  ++ LY      R+ +  TG+G  A SW+L VPGASA +LE  VPY  A+  + +G +      +C  E A ++A  AY RA+HL +  ++  PH       +GV  T  + SS PK+G HR +V A+T  G   Y L LAKG RDR  E+   SR++I+A AEAA   V+  F +  LL                            E+     F P   A++ L+  +   +L++P       L    ST      +T AT   + D  P +K                       ++++PGS+NP+H+GH+ + ++AQ
Sbjct:   45 VPADVTQTIRNLYAMPKPARIYIVATGAGSTAGSWLLGVPGASASVLEMCVPYAKASLAKFLGGE---PKHFCCEETAVAMAEKAYERALHLWMMDNDGNPHCVGGENFMGVSITGAIVSSTPKRGEHRVHVAAKTALGTTTYTLCLAKGERDRVGEEHVASRLVIRAIAEAAQTPVSDEFSACSLLEG--------------------------EVVQGPIFTPTSSALQKLLSSKLSNVLVLP-------LGSMPSTPQGPGAATTATALEIADFIPARK-----------------------SILVPGSFNPIHQGHVEMAKKAQ 313

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A7S3AUJ8_9EUKA (Hypothetical protein n=1 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3AUJ8_9EUKA)

HSP 1 Score: 115 bits (289), Expect = 4.410e-26
Identity = 77/175 (44.00%), Postives = 101/175 (57.71%), Query Frame = 1

Query:  277 DVTSLLQGLYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGLVVA 801
            DV SL + +YG    P++ +  TG G Q V  +L+ PGAS  +LE  VPY   A  + +G +  PT  YC P+VA SLA AAY RA  LS   S +G      A  +GVGCTA + S+  ++G HRCY+   T +GV   EL L KG R+RA ED  VSR ++   A+  GL VA
Sbjct:   26 DVGSLAREIYGRPSPPQLVVYLTGGGAQLVPMLLTTPGASRSVLELRVPYAQRALKDLLGAE--PT-RYCVPDVARSLALAAYERAQELS---SEEG------APCMGVGCTAALRSTPERRGQHRCYIAVATDEGVHELELMLTKGVRERAEEDEVVSRCMLLGLAKVCGLDVA 188

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A3C0ECB5_9CHLR (Uncharacterized protein (Fragment) n=1 Tax=Dehalococcoidia bacterium TaxID=2026734 RepID=A0A3C0ECB5_9CHLR)

HSP 1 Score: 112 bits (281), Expect = 1.710e-24
Identity = 74/172 (43.02%), Postives = 101/172 (58.72%), Query Frame = 1

Query:  277 DVTSLLQGLYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGL 792
            D   L+Q ++ S P  +  L+  G+G +AV+W+L V GAS  LLE  VPY + +  + IG +    + Y S E A  +ARAAY RA+ L     N  P       VVG+GCTAT+A+ RPK+G HRC +   T  G A Y L   KGRRDRA E+  VS +++QA + A+GL
Sbjct:    3 DFRELVQKIHDSQP--QAVLAVAGAGSEAVAWLLGVAGASRSLLEVVVPYGSLSMVDFIGKE---PSQYVSVETATDMARAAYKRALLLR---ENPIP-------VVGLGCTATIATDRPKRGEHRCCIATWTETGSATYSLRFDKGRRDRAGEEGVVSWLLLQALSTASGL 159

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A836CF87_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CF87_9STRA)

HSP 1 Score: 114 bits (285), Expect = 1.940e-23
Identity = 81/209 (38.76%), Postives = 106/209 (50.72%), Query Frame = 1

Query:  322 PRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSV------------------------TGSNKGPH--------AASEAGV------------------------VGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAE 780
            P++CLSTTG+GGQAV+W+L VPGASA LLEA+VPY   +  + +G       S CS E A ++AR AY RA+ L+V                        T   +G H            AGV                        +GVG TA +AS++PK+G HRC+V A    G   Y L+LAKGRRDRA ED  VSR++++A  E
Sbjct:    5 PQLCLSTTGAGGQAVAWLLGVPGASATLLEATVPYSPLSGRQWMGGAAAAPTSLCSEEAAIAMAREAYKRALQLTVAERGLARAAAACALGVGATAAVASTRPKRGDHRWDGGGARCVRGAGVPVHACLVAVGVVVIDQAYVGAACALGVGATAALASTQPKRGDHRCHVAACGAAGTTLYSLTLAKGRRDRAGEDAVVSRLVLRAVLE 213

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A2A4SIE2_9CHLR (CTP_transf_like domain-containing protein n=1 Tax=SAR202 cluster bacterium TaxID=2030829 RepID=A0A2A4SIE2_9CHLR)

HSP 1 Score: 110 bits (275), Expect = 5.530e-23
Identity = 70/172 (40.70%), Postives = 101/172 (58.72%), Query Frame = 1

Query:  277 DVTSLLQGLYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGL 792
            D   L+Q ++ S P  +  L+  G+G +AV+W+L V GAS  LLE  VPY + +  + IG +    + + S E A  +ARAAY RA+ +            S   V+G+GCTAT+A+ RPK+G HRC +   +  GVA Y L   KGRRDRA E+  VS +++QA + A+GL
Sbjct:    3 DFRDLVQKIHDSPP--QAVLAVAGAGSEAVAWLLGVAGASRTLLEVVVPYGSLSMIDFIGHE---PSQFVSVETAXDMARAAYNRALLMRE----------SPVPVLGLGCTATIATDRPKRGEHRCCIATWSETGVATYSLRFDKGRRDRAGEEEVVSWLLLQALSTASGL 159

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A7I4DAC7_PHYPA (Uncharacterized protein n=1 Tax=Physcomitrium patens TaxID=3218 RepID=A0A7I4DAC7_PHYPA)

HSP 1 Score: 105 bits (263), Expect = 3.260e-22
Identity = 68/162 (41.98%), Postives = 97/162 (59.88%), Query Frame = 1

Query:  310 SSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGLV 795
            SSP  R  L  +G   QA+ W+LSVP AS  +LEA+VPY  A+  + +G    P+ S C  E A+ +A AAY RA+ LS+ G            V G+G T  +AS+ PK+G HRC+V A+T  G+  Y+L+LAKG RDR +ED   S V+++  A+  G++
Sbjct:   14 SSPT-RAVLCLSGGAAQALGWLLSVPRASNTVLEATVPYSRASMVQLLGKV--PSQSVCR-ETADEIAMAAYNRALKLSMPGVQ----------VAGIGFTGALASTPPKRGNHRCFVTARTQSGLWQYDLTLAKGYRDRYAEDYLTSCVVVKTLADVCGVL 161

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A2K1KUU1_PHYPA (CTP_transf_like domain-containing protein n=3 Tax=Physcomitrium patens TaxID=3218 RepID=A0A2K1KUU1_PHYPA)

HSP 1 Score: 105 bits (263), Expect = 2.420e-21
Identity = 68/162 (41.98%), Postives = 97/162 (59.88%), Query Frame = 1

Query:  310 SSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGLV 795
            SSP  R  L  +G   QA+ W+LSVP AS  +LEA+VPY  A+  + +G    P+ S C  E A+ +A AAY RA+ LS+ G            V G+G T  +AS+ PK+G HRC+V A+T  G+  Y+L+LAKG RDR +ED   S V+++  A+  G++
Sbjct:   14 SSPT-RAVLCLSGGAAQALGWLLSVPRASNTVLEATVPYSRASMVQLLGKV--PSQSVCR-ETADEIAMAAYNRALKLSMPGVQ----------VAGIGFTGALASTPPKRGNHRCFVTARTQSGLWQYDLTLAKGYRDRYAEDYLTSCVVVKTLADVCGVL 161

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A2K3DNV8_CHLRE (Uncharacterized protein n=1 Tax=Chlamydomonas reinhardtii TaxID=3055 RepID=A0A2K3DNV8_CHLRE)

HSP 1 Score: 106 bits (265), Expect = 3.430e-21
Identity = 71/175 (40.57%), Postives = 100/175 (57.14%), Query Frame = 1

Query:  268 VPEDVTSLLQGLYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAVSRVIIQATAEAAGL 792
            +P DV SL++ ++ S    +  + TTG   Q++SW+LSVPGASA +LEA+VPY   +  E +G   P  A +CS   A ++A AAY RA  LS  G           G+VGVG T  +A+   K+G HR YV      G     L+L+KG R R  ED  VSR++++  AEA+G+
Sbjct:   44 LPPDVESLIKRIHASRT--KAVVYTTGGAVQSISWLLSVPGASATVLEAAVPYARDSLVEVLGGKEP--AQFCSAGTAAAMAEAAYRRAAALSGFGD----------GIVGVGATCALATFPLKRGEHRAYVAVHGGGGRRCVSLTLSKGARSRVGEDDLVSRLLVKILAEASGV 204

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BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Match: A0A7S2RU63_9STRA (Hypothetical protein (Fragment) n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2RU63_9STRA)

HSP 1 Score: 105 bits (263), Expect = 4.850e-21
Identity = 104/342 (30.41%), Postives = 153/342 (44.74%), Query Frame = 1

Query:  277 DVTSLLQGLYGSSP-APRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEKIGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVGVGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKG-RRDRASEDTAVSRVIIQATAEAAGLVVARSFKSEHLLRTNRTEASSETDDVEAAADKXXXXXEVDEITPVRRFCPEPDAIESLVEGESEALLIVPKLREGDHLTGRNSTDLDLEDSTNATVGDSSPQQKIP--KEITAV----TLRDAAARAALSRNT------------TVILPGSYNPLHRGHLRLLQEAQ 1242
            DV ++L  LY     AP V + T G G  A  W+ SVPGAS C+LE SVPY  AA  E +G +    A +C    A  + + A  RA  L +   +  P + ++   +G+  TA++A++R K+G H  +V   T  G   Y+L L K  +R R  ED  VSR++++A AEAAGL V  +F S+ L                                                  E+EAL       +G H  G+     DL+D  +     S P+ K+P  + +  V    +  + AA  ++ + T            T+I PGS+NPLH GHL L++ AQ
Sbjct:   17 DVDAMLARLYAQETNAPLVAVVTAGGGSAAGGWLTSVPGASRCVLEVSVPYLKAALTEYMGYE---PAKFCDAGTALDMGKMALRRAKCLWLAEHDGDPASLADQTFMGLSATASLATTRQKRGAHTAWVAVCTDHGHTLYQLELDKSAQRPRQVEDVLVSRLVLRALAEAAGLEVDHAFASKGLA-------------------------------------------------EAEAL------PQGHHQQGQT----DLQDLLH-----SEPEVKLPSCENVLVVAASGSTENPAAATSVDKITFATMPNYRPSPRTIIYPGSFNPLHHGHLNLVKFAQ 291

The following BLAST results are available for this feature:

BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot

BLAST of mRNA_H-paniculata_contig3269.8774.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25


Match Name	E-value	Identity	Description
A0A6H5J5Q6_9PHAE	4.490e-74	45.00	Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2...	[more]
A0A7S2DDP4_9STRA	1.210e-30	31.10	Hypothetical protein n=1 Tax=Dictyocha speculum Ta...	[more]
A0A7S3AUJ8_9EUKA	4.410e-26	44.00	Hypothetical protein n=1 Tax=Haptolina ericina Tax...	[more]
A0A3C0ECB5_9CHLR	1.710e-24	43.02	Uncharacterized protein (Fragment) n=1 Tax=Dehaloc...	[more]
A0A836CF87_9STRA	1.940e-23	38.76	Uncharacterized protein n=1 Tax=Tribonema minus Ta...	[more]
A0A2A4SIE2_9CHLR	5.530e-23	40.70	CTP_transf_like domain-containing protein n=1 Tax=...	[more]
A0A7I4DAC7_PHYPA	3.260e-22	41.98	Uncharacterized protein n=1 Tax=Physcomitrium pate...	[more]
A0A2K1KUU1_PHYPA	2.420e-21	41.98	CTP_transf_like domain-containing protein n=3 Tax=...	[more]
A0A2K3DNV8_CHLRE	3.430e-21	40.57	Uncharacterized protein n=1 Tax=Chlamydomonas rein...	[more]
A0A7S2RU63_9STRA	4.850e-21	30.41	Hypothetical protein (Fragment) n=2 Tax=Rhizochrom...	[more]

Pages

Alignments

The following features are aligned


Aligned Feature	Feature Type	Alignment Location
H-paniculata_contig3269	contig	H-paniculata_contig3269:10576..17095 +

Analyses

This mRNA is derived from or has results from the following analyses


Analysis Name	Date Performed
Diamond blastx: OGS1.0 vs UniRef90	2022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous	2021-02-24

Properties


Property Name	Value
Taxonomic scope	Eukaryota
Seed ortholog score	259.6
Seed ortholog evalue	2.8e-66
Seed eggNOG ortholog	2880.D8LCX0
Hectar predicted targeting category	other localisation
EggNOG OGs	28KTS@1,2QTA1@2759
Ec32 ortholog description	nucleotidyltransferase
Ec32 ortholog	Ec-07_007220.1
Best tax level	Eukaryota
Best eggNOG OG	NA\|NA\|NA
Exons	4
Model size	1415
Cds size	1413
Stop	0
Start	0

Relationships

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Species	Type	Position
mRNA_H-paniculata_contig3269.8774.1	prot_H-paniculata_contig3269.8774.1	Halopteris paniculata Hal_grac_a_UBK monoicous	polypeptide	H-paniculata_contig3269 10576..17094 +

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Species	Type	Position
1622930008.1577587-CDS-H-paniculata_contig3269:10575..10922	1622930008.1577587-CDS-H-paniculata_contig3269:10575..10922	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 10576..10922 +
1691481108.3567414-CDS-H-paniculata_contig3269:10575..10922	1691481108.3567414-CDS-H-paniculata_contig3269:10575..10922	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 10576..10922 +
1622930008.1778176-CDS-H-paniculata_contig3269:13510..13658	1622930008.1778176-CDS-H-paniculata_contig3269:13510..13658	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 13511..13658 +
1691481108.3657193-CDS-H-paniculata_contig3269:13510..13658	1691481108.3657193-CDS-H-paniculata_contig3269:13510..13658	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 13511..13658 +
1622930008.194661-CDS-H-paniculata_contig3269:14681..14914	1622930008.194661-CDS-H-paniculata_contig3269:14681..14914	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 14682..14914 +
1691481108.373026-CDS-H-paniculata_contig3269:14681..14914	1691481108.373026-CDS-H-paniculata_contig3269:14681..14914	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 14682..14914 +
1622930008.2074354-CDS-H-paniculata_contig3269:16409..17094	1622930008.2074354-CDS-H-paniculata_contig3269:16409..17094	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 16410..17094 +
1691481108.3804348-CDS-H-paniculata_contig3269:16409..17094	1691481108.3804348-CDS-H-paniculata_contig3269:16409..17094	Halopteris paniculata Hal_grac_a_UBK monoicous	CDS	H-paniculata_contig3269 16410..17094 +

Sequences

The following sequences are available for this feature:

protein sequence
mRNA from alignment at H-paniculata_contig3269:10576..17095+
coding sequence from alignment at H-paniculata_contig3269:10576..17095+

protein sequence of mRNA_H-paniculata_contig3269.8774.1

>prot_H-paniculata_contig3269.8774.1 ID=prot_H-paniculata_contig3269.8774.1|Name=mRNA_H-paniculata_contig3269.8774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=471bp
SSYCLFCCATNRGAGTATQGERMWMTSAFCHLSSAFTGASAFSALRQPIS
YRSASSSKQVIWGIAQMSTTLGTPHGGGGSGNGNGGGWSVPEDVTSLLQG
LYGSSPAPRVCLSTTGSGGQAVSWMLSVPGASACLLEASVPYCTAACDEK
IGDDLPPTASYCSPEVAESLARAAYTRAVHLSVTGSNKGPHAASEAGVVG
VGCTATVASSRPKKGLHRCYVCAQTHDGVAHYELSLAKGRRDRASEDTAV
SRVIIQATAEAAGLVVARSFKSEHLLRTNRTEASSETDDVEAAADKDDDD
DEVDEITPVRRFCPEPDAIESLVEGESEALLIVPKLREGDHLTGRNSTDL
DLEDSTNATVGDSSPQQKIPKEITAVTLRDAAARAALSRNTTVILPGSYN
PLHRGHLRLLQEAQALQAETSRGSRKGDGKSDGAGEESPEDVVEETVEEV
LGGTAMVGARGWGVATNPDKA

mRNA from alignment at H-paniculata_contig3269:10576..17095+

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

>mRNA_H-paniculata_contig3269.8774.1 ID=mRNA_H-paniculata_contig3269.8774.1|Name=mRNA_H-paniculata_contig3269.8774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6520bp|location=Sequence derived from alignment at H-paniculata_contig3269:10576..17095+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAGCTACTGTCTGTTTTGTTGTGCTACTAACCGTGGCGCAGGCACAGC
AACCCAGGGTGAGCGGATGTGGATGACATCTGCATTTTGCCATCTATCCT
CCGCTTTTACCGGGGCCTCCGCTTTCTCTGCCTTGCGACAACCCATATCC
TACCGAAGTGCTTCCTCATCCAAGCAGGTAATTTGGGGCATCGCTCAAAT
GTCTACAACACTCGGCACTCCCCACGGTGGCGGCGGCAGCGGCAACGGCA
ACGGCGGTGGCTGGTCGGTCCCCGAGGACGTCACATCTTTGCTTCAAGGT
TTATATGGATCGTCTCCTGCTCCACGGGTGTGCTTGTCGACTACTGGGTA
AGCATACGGACGAGGGTCTTCACGTTGTTTGATCAAGTCCAAAATTTACT
GACGCTTACAAGCAAACTTGAAACTTGGTAGCCTCTTGCGTACAAAAGAT
ACCCTAAAAAAATATTTTATTGCCACTGAAGGCGAATCGAACTGCCAGAT
GGCCTCTCAATGACTTCCTGAGATGGGAAAGGAGGATTACACGCGTCCAA
GGCTAAGCCGGTCCTACGCTTGGACTCGTAAATGTTCTCTTTACTTTCTA
CTTTTCACTTTCTCTACTGGATGGCAGAGATGACTGATGTTCTCTGACGT
CAAAGGTCATAACGACTTCCTAGCTGTCCTGTATGTACTACTATCGGATT
GGCTTATATATAGGAATATTGGTGACCCCTGTCCCCGTAAGTTCTTCTTT
TTCAGGTAGCCATTAGGCGGAGACTGTTGCCTAATTTTGTCTGTTACCCT
CACCCGTGCGTCTTTGGAGCTTGCTGCCAAATGTTCTGGGGCCAGAGCCC
CGTTATTATTCAGGTGTTGTCAACAGAGAAAACTAATGCCGAAAGAACGT
ACCTCTGTTACAGAGGCAATGCCCCCCCCTCTCGAGGACGCGTGGTCGAT
AGTCTAACAACTACGGTATCCAAAACATGACTACACCCCCCCCCCCTGTT
TTCGGGGCTGAATCCCTAGGAGCCTGTTGCCCCCGACCTAGCTGTGCGTT
TAGTGCTAACCAGTTGAATGTACATGGCATCAGTGCCAATGTTAACGGAT
GCGGTTGTCGCTTGCCTGTCGGTATTGCACGGCCTGTTGAGTAATAGATA
TGCATGGCATGCACAGATGTTTTTTTGCGAAGGTATTGATGTCTTCGTTA
TCGATAAGTGTGTCGGTTGTTGCCAGGTGTCATTCCCAATGAAGTCGATG
TGTTTGCTGGGTCAAGAATACCTGGTTTCGTACGTTTTCAACGAATACTC
GGTGTTAGGGTGCTGCGAAGAACTAATTTTGATCGCATGTGGTCGAATAC
TCCTTGTCTTTGAGCCTGGTATTGGTATCGTCAACCAGGTGAGTTCAATA
TTGTGTCAAGAGCACGTTGAATTTAGTACACCTTAGTCAAAACGGCTTAA
CCCTTACTGACCGGCAAGCCTGCATTTCGAAAATTTCGACATGTGCTTTT
GCTTTCCCGAGATCAGATCAGACCAGTATGTCGACAGAATATGACAAATA
GTATAGCGTGATTGCGACGTGTTTGGGTCATCTATATAAATATAGAATGT
GAGATGTTGACGCCAGGTGTAAAGGGTATCGATTTTTTTGCAATAGTTAC
TCACGTCAAGGGGCCGAGAGCGCCGTGTGCTTGATGTAGAGGTGGTACAG
CTGACAGACTGCAAAAAAATACGTTGGTTCCACTGAGGTGGTGGCAGCCA
GTTGGACAGCCTATGCAGCTCAGATGTCGACGCTAGGTGTAAACGGGTAT
CGCTTTTTTACAACATTCACATACGTCAAGGGCTGGCGCAGCAGCCGGGG
CGCGATGTGCATGATGTAGAGGTGGTGCAGTCGACAGATTTCAGTATATG
TGTTGATTCCATTGGGCGGTGGCAGCCAGCTAGACAGCGCGAACAGCATG
ATGCTGTAGAGTTGTGCCCGGTGACAAGAAACAGACAGTACTACATGCAG
GATAGTTGGCGTAGTACTGCATGTAGCACCATATCTGCGGCACACAATGA
CGAGATAGGGAGAGAGCTGACAGGCACTAGGGTTTTCCGAGATTTCTGTG
GCGAACGAAAGCCACTGCGTATGTGGCGTCCTATTATGAGTAACGGTACC
CACAGGTTCAGCAGCAGGCGGTCGTTCACTGACACTCGTGCCAGTCGGGA
CATGACAAAATGACTGATTTCGATCGTAGTTGTTACTTGGGCGTTGGGGT
TCCTGAAAAAAGAATGTCTTCCTGTTGTATATTTTTTCAACAGGTAGAAG
AGGGTCAAGTTCGATTAAAATTCAGTGTGGTGTCATGAATATTGATTTCT
CCCGCCTTGATCTAATTTGCTCTAATAGATGTAGACAGCTAAACTTTGAT
GTCAATTGCATAACCTTAATATCGGTACGATGGAGTTATTTTACGAGCTT
GATAGTTCTATTAACTGTGGCACGTGGATTGGCTAGTGGAGGAGGCTTGC
GGTAGTTGGGCGGGACATTTTATTTCCGTCATGCGTTCACGTGAAACCCA
TGTTATGTTTACGTGAAGTACACACGCGAGTGATACAGTGATACTTACCT
GTGAAGGTTATGCCCCGCCCCCGTCCCCCCCTTCCCCTGGGTTTGGGGCG
TAAGCCGGTTGTGGACATGGTCTCTGAGCTCCGAGCTATTGACTCCTCGA
GAGTACCCATAGTAAGCCTTTTCGCACGACTAATTTGGAATTGCCAGTAT
TAGAGCAATTATGTCATTGAAAATCGTATGGCATAGCACTCAAAGTGGAT
ATAACATTTTTGTCAATGACAGTAGTTTCGCTATGGTGGTTGCAAGACCT
CGATTTTTTCTACTCGAAATCCCAATCGTCAATCGCCGTTCTCCCCCCTT
ATTCGTCTTTATCCCTTTTTCTATATCTATAACAGGTCCGGAGGACAGGC
GGTATCGTGGATGCTAAGCGTCCCGGGAGCCAGCGCGTGTCTTCTCGAAG
CGAGCGTGCCCTATTGTACGGCGGCTTGCGATGAAAAGATTGGGGATGAT
CTACCACCGACAGCAAGTTACTGCTCTCCGGAGGCGAGCGAATGCGGCGA
CCCTTTTCATTGGCTGAAATGTTTAGCCCGTTGTTGGTGAAGACCCAATT
GGGATCTTGACTGACTGCAGGGGTAACCAACCGCAGTTATTTTAGATAAA
GGAAAGTAGAAATCCGTGCATCGTTGTGTGCTTGTATTTGCCTTGGACAC
GACGCACAGCCCGTTCACAGTGAAGGGCACGAGGATTAATTTACCCAGTG
CGAGGGGTTTCCCCCCAAGGACATGCACTAGATAACGAGATGAGGGAAAT
ATCGATACCGCATCAGTTAGATTAACCTGTTGCAGTAGTAGACGGCGAGG
ACTGAAGAGGATGACTCATCAGTCCGCGAGCTCGCAGTAACCTTCAATCT
TGGACATATGATGGGAAGCCTTACAGGCGATTCTTGCTGCCTTACAATGT
TATCGTCATTGGTTGGAGGAAATGGTTGTTATGCGATTCCCTGTCTCCCC
GAACTGAAAAAACACGAAGGGGTAACGGAGTCACCTCGAATTGAATATTG
TCATCACTAGTAACAGACCACGGCAACGTTAGTGGCGTATCGAACTCAGA
TTTACTCGATACCTGTAGGCAGACCGCGGCTATACTAGTGGCGTGCCAAG
CTCAGAACCCCCCCCGCCCCCCCCCCCGCCCCCCGTGAGCATCACTACAA
GCACGCATCAAGTATGTGATGACGGAAATAAAAAGACGTCCTCAAAAAAT
TAGTTGTTACTTCCAAGTTGAAAAATCGAGAAAAGGAAAAAATCGGAAAT
TTTGCGAAAAAGATTGAGCAACGTTTGTTGAGGCCTCCTATAGCGTGTGG
CATACCTTGCGCTGCCCTTGGCACGAACCCTTGCCGAATGATGATGCACG
TAGGTAGTCCTCATCGGTTCTTTTCATTATTATTATGGATCTCAACCCCA
GCGCTTGGTAAACAAAAACAAATGGAGCGGAAATCTTCAGCTCATCCGTC
CCGTCGTCGTCCACCGTACCTCAATGTGTGTGCCTGACTGCCCCCTGACC
TCGCAGGTCGCTGAAAGTCTGGCTCGAGCCGCGTATACCCGTGCGGTCCA
CCTGTCTGTCACGGGATCGAACAAGGGCCCCCATGCAGCGTCTGAAGCTG
GTGTGGTGGGCGTGGGGTGTACTGCAACGGTGGCGTCGTCGCGGCCTAAG
AAGGGTTTGCACCGCTGCTATGTGTGCGCACAGACGCATGATGGAGTGGC
GCACTACGAGCTGTCGCTCGCCAAAGGTCGTCGAGACAGGTGCGTAAATA
GTGGAAGATGAGATGGACGTACTGCGCGGTTCGTATCTTGCATAGCTTAG
AGTTTGCCGCGCTGGTTCGAGTACGAGTACGCTTATTTTTCAAAGAATTG
ATGCAGTGCGTTTGGTCAATGGGGGGGGCGGGGGTGTTGACAATATTCCA
CCTGCTGCGTTTGGGTGGAGGATCTCTGTTGCGGTGAATTTAGTCGCACG
TGGTGCAACACAAGGAGTCGCTTGTATGAGAACGCCATTAGAGCATTAGA
GAGAGAGAGAGAGAACTCAAGGTACGTGTGTACGCTTGCAAATTGACTGC
GCTCAGATGGTGCGTCCTTCTGGCCCTTCCTCCCCGTTTGGTGTAAGTAT
AGTCGTTATTGTCAGCTTTGAGAGACGAAGCTCGATGACATCAGCGTCCC
ACGATCGTACATGTCGAGATCCGCAAATCAGCAAGACCGATGAACCGTAT
TTCACGGGCTTCCTTGTAAATTCCCCTTCTCCGTTTTCCGTAGACTGCAC
AGTATGTTTCTTACTACGCGCGCTATGATTTAAACGTATGCGAATTTCAG
CTGTAGAGCCTGTCAGATACGCTTACCTGCAAGCTGTGTCCCCGGTACGG
TACAGGCTGGTTCGGAGAGGAAAACTCGAAAAGTGTCTTCCAACGATTTC
TCGACACACACCTATCCAATTTAGACAATCTAAATATGTGATCCCCCAGA
AGTTATGCAACCTGGAGGCGTCGCCAGATTGGCAGCACGAACCCTTGGTG
GGCTGCTAGTCCCACGTGAACCAGAGGGGTACAAAAAACACATAGAAAAC
AAAGAAGCACAATCTCCCAAAAACTTACGTCATCGTGTAGTTATCCCGCG
TTTCGTAGATGCGCCGCATGTTATTGAATGTACCCTGTATGTTCGGTATG
GTTGTTCAATGTATGCCCGGCTTTCGTCAATCCAAATTTGATGTGTATTC
TATTCTGTTACCACGTCCACCTGCAAGGTTAACGCGGGATATGGGCAGAG
AGGGTGACATCAGGCCGCCGTCGCGTATTCACCCAGTTTCCGCTCTAACT
CCAGTATATTATCAGAACACGTACGTTGAGGTGGTCCGATTTACGTTTTC
CCATTTTGTGACGGAATTTTTTTCGAGTTATCAAATAAACCTTTGCACAC
ATAATCCTTACTCAATCCCTTGCTCAATTCCCGAGGTCGTCAATGAAGGG
TATTTGTTCTGTTTCGTCTTAGTTCGTCTTTTTTCTGGGATCTCAGGTCA
CTAAAAATCGCCAGAATCACTTCGGGACCTCCAGAAAACGGGTGAAAGAA
AGCAACCCCCCCCCCCCGACCATGCACTGACGACATCGAGAACTGAGTAA
GGAATACGTGTGCAAAATTTCAGTTGAAAACTCGAACAATTGCCGTGAAA
AAATGGACTTGAAGCTATTCGGACTTTCTTCTCGGAACCAGCTCGTACCC
CCTGCCCCGCCCGCCCGCCTGCCTGCCTAAACAGAGCCAGCGAGGATACC
GCGGTCAGTCGAGTTATTATTCAAGCTACGGCAGAAGCCGCGGGTCTGGT
GGTCGCAAGGAGCTTCAAGAGTGAGCATTTATTACGGACCAATCGTACTG
AAGCCTCCTCCGAAACAGACGATGTGGAGGCTGCGGCAGACAAAGACGAT
GACGATGACGAAGTCGACGAAATTACCCCGGTTCGTCGCTTCTGTCCAGA
GCCAGACGCCATCGAGTCTCTGGTGGAAGGCGAGTCGGAGGCCCTGCTGA
TCGTGCCGAAGTTGCGAGAGGGAGATCACCTCACGGGAAGAAACTCGACA
GACCTCGACCTCGAGGACAGCACTAACGCCACCGTCGGAGACAGCAGCCC
GCAGCAGAAAATACCAAAAGAAATAACAGCGGTTACGCTCAGAGATGCCG
CCGCAAGGGCGGCTCTTTCCCGTAACACGACGGTGATCCTCCCAGGGTCC
TACAACCCTCTGCACAGGGGGCACCTCCGGCTGCTCCAGGAAGCGCAAGC
ATTGCAAGCCGAAACAAGCCGAGGGTCACGAAAAGGCGACGGAAAGAGTG
ACGGGGCTGGGGAGGAATCGCCGGAGGATGTGGTGGAGGAGACGGTGGAG
GAAGTGTTAGGGGGCACAGCGATGGTGGGAGCGCGGGGGTGGGGCGTGGC
AACAAACCCGGACAAGGCAG

Coding sequence (CDS) from alignment at H-paniculata_contig3269:10576..17095+

>mRNA_H-paniculata_contig3269.8774.1 ID=mRNA_H-paniculata_contig3269.8774.1|Name=mRNA_H-paniculata_contig3269.8774.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2826bp|location=Sequence derived from alignment at H-paniculata_contig3269:10576..17095+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGCAGCTACTGTCTGTTTTGTTGTGCTACTAACCGTGGCGCAGGCACAGC
AACCCAGGGTGAGCGGATGTGGATGACATCTGCATTTTGCCATCTATCCT
CCGCTTTTACCGGGGCCTCCGCTTTCTCTGCCTTGCGACAACCCATATCC
TACCGAAGTGCTTCCTCATCCAAGCAGGTAATTTGGGGCATCGCTCAAAT
GTCTACAACACTCGGCACTCCCCACGGTGGCGGCGGCAGCGGCAACGGCA
ACGGCGGTGGCTGGTCGGTCCCCGAGGACGTCACATCTTTGCTTCAAGGT
TTATATGGATCGTCTCCTGCTCCACGGGTGTGCTTGTCGACTACTGGAGC
AGCTACTGTCTGTTTTGTTGTGCTACTAACCGTGGCGCAGGCACAGCAAC
CCAGGGTGAGCGGATGTGGATGACATCTGCATTTTGCCATCTATCCTCCG
CTTTTACCGGGGCCTCCGCTTTCTCTGCCTTGCGACAACCCATATCCTAC
CGAAGTGCTTCCTCATCCAAGCAGGTAATTTGGGGCATCGCTCAAATGTC
TACAACACTCGGCACTCCCCACGGTGGCGGCGGCAGCGGCAACGGCAACG
GCGGTGGCTGGTCGGTCCCCGAGGACGTCACATCTTTGCTTCAAGGTTTA
TATGGATCGTCTCCTGCTCCACGGGTGTGCTTGTCGACTACTGGGTCCGG
AGGACAGGCGGTATCGTGGATGCTAAGCGTCCCGGGAGCCAGCGCGTGTC
TTCTCGAAGCGAGCGTGCCCTATTGTACGGCGGCTTGCGATGAAAAGATT
GGGGATGATCTACCACCGACAGCAAGTTACTGCTCTCCGGAGGTCCGGAG
GACAGGCGGTATCGTGGATGCTAAGCGTCCCGGGAGCCAGCGCGTGTCTT
CTCGAAGCGAGCGTGCCCTATTGTACGGCGGCTTGCGATGAAAAGATTGG
GGATGATCTACCACCGACAGCAAGTTACTGCTCTCCGGAGGTCGCTGAAA
GTCTGGCTCGAGCCGCGTATACCCGTGCGGTCCACCTGTCTGTCACGGGA
TCGAACAAGGGCCCCCATGCAGCGTCTGAAGCTGGTGTGGTGGGCGTGGG
GTGTACTGCAACGGTGGCGTCGTCGCGGCCTAAGAAGGGTTTGCACCGCT
GCTATGTGTGCGCACAGACGCATGATGGAGTGGCGCACTACGAGCTGTCG
CTCGCCAAAGGTCGTCGAGACAGGTCGCTGAAAGTCTGGCTCGAGCCGCG
TATACCCGTGCGGTCCACCTGTCTGTCACGGGATCGAACAAGGGCCCCCA
TGCAGCGTCTGAAGCTGGTGTGGTGGGCGTGGGGTGTACTGCAACGGTGG
CGTCGTCGCGGCCTAAGAAGGGTTTGCACCGCTGCTATGTGTGCGCACAG
ACGCATGATGGAGTGGCGCACTACGAGCTGTCGCTCGCCAAAGGTCGTCG
AGACAGAGCCAGCGAGGATACCGCGGTCAGTCGAGTTATTATTCAAGCTA
CGGCAGAAGCCGCGGGTCTGGTGGTCGCAAGGAGCTTCAAGAGTGAGCAT
TTATTACGGACCAATCGTACTGAAGCCTCCTCCGAAACAGACGATGTGGA
GGCTGCGGCAGACAAAGACGATGACGATGACGAAGTCGACGAAATTACCC
CGGTTCGTCGCTTCTGTCCAGAGCCAGACGCCATCGAGTCTCTGGTGGAA
GGCGAGTCGGAGGCCCTGCTGATCGTGCCGAAGTTGCGAGAGGGAGATCA
CCTCACGGGAAGAAACTCGACAGACCTCGACCTCGAGGACAGCACTAACG
CCACCGTCGGAGACAGCAGCCCGCAGCAGAAAATACCAAAAGAAATAACA
GCGGTTACGCTCAGAGATGCCGCCGCAAGGGCGGCTCTTTCCCGTAACAC
GACGGTGATCCTCCCAGGGTCCTACAACCCTCTGCACAGGGGGCACCTCC
GGCTGCTCCAGGAAGCGCAAGCATTGCAAGCCGAAACAAGCCGAGGGTCA
CGAAAAGGCGACGGAAAGAGTGACGGGGCTGGGGAGGAATCGCCGGAGGA
TGTGGTGGAGGAGACGGTGGAGGAAGTGTTAGGGGGCACAGCGATGGTGG
GAGCGCGGGGGTGGGGCGTGGCAACAAACCCGGACAAGGCAAGCCAGCGA
GGATACCGCGGTCAGTCGAGTTATTATTCAAGCTACGGCAGAAGCCGCGG
GTCTGGTGGTCGCAAGGAGCTTCAAGAGTGAGCATTTATTACGGACCAAT
CGTACTGAAGCCTCCTCCGAAACAGACGATGTGGAGGCTGCGGCAGACAA
AGACGATGACGATGACGAAGTCGACGAAATTACCCCGGTTCGTCGCTTCT
GTCCAGAGCCAGACGCCATCGAGTCTCTGGTGGAAGGCGAGTCGGAGGCC
CTGCTGATCGTGCCGAAGTTGCGAGAGGGAGATCACCTCACGGGAAGAAA
CTCGACAGACCTCGACCTCGAGGACAGCACTAACGCCACCGTCGGAGACA
GCAGCCCGCAGCAGAAAATACCAAAAGAAATAACAGCGGTTACGCTCAGA
GATGCCGCCGCAAGGGCGGCTCTTTCCCGTAACACGACGGTGATCCTCCC
AGGGTCCTACAACCCTCTGCACAGGGGGCACCTCCGGCTGCTCCAGGAAG
CGCAAGCATTGCAAGCCGAAACAAGCCGAGGGTCACGAAAAGGCGACGGA
AAGAGTGACGGGGCTGGGGAGGAATCGCCGGAGGATGTGGTGGAGGAGAC
GGTGGAGGAAGTGTTAGGGGGCACAGCGATGGTGGGAGCGCGGGGGTGGG
GCGTGGCAACAAACCCGGACAAGGCA