mRNA_H-paniculata_contig32552.8754.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A6H5L2H2_9PHAE (Rab-GAP TBC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L2H2_9PHAE) HSP 1 Score: 68.9 bits (167), Expect = 3.470e-12 Identity = 31/51 (60.78%), Postives = 36/51 (70.59%), Query Frame = 1
Query: 13 KECSRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAGS 165
KE RA KW M++ F WR G K+ + R RVRKGVPDCVRG+VWQ L GS
Sbjct: 363 KEGRRAQKWRKMIDNFDSWRMGKKATRFRNRVRKGVPDCVRGKVWQMLMGS 413
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A7S1TPD6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TPD6_9STRA) HSP 1 Score: 60.1 bits (144), Expect = 4.610e-9 Identity = 28/53 (52.83%), Postives = 36/53 (67.92%), Query Frame = 1
Query: 13 KECSRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAGSKV 171
KEC R DKW+ ML DW K KSKKL+ R+RKGVP+ +RG +W AG ++
Sbjct: 506 KECRREDKWIAMLE---DWHKYRKSKKLKHRIRKGVPNKLRGRLWAEFAGVRL 555
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A0L0DCR4_THETB (Plant adhesion molecule 1 n=1 Tax=Thecamonas trahens ATCC 50062 TaxID=461836 RepID=A0A0L0DCR4_THETB) HSP 1 Score: 58.2 bits (139), Expect = 2.190e-8 Identity = 26/54 (48.15%), Postives = 32/54 (59.26%), Query Frame = 1
Query: 13 KECSRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAGSKVW 174
KE RA KW+ M F DWR+ K + RVRKG+PDCVRG+ W +G W
Sbjct: 238 KESERATKWLTM---FRDWRRWRVKPKTKARVRKGIPDCVRGQAWLLASGGHEW 288
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A5K3FI19_MESCO (Uncharacterized protein n=3 Tax=Mesocestoides corti TaxID=53468 RepID=A0A5K3FI19_MESCO) HSP 1 Score: 53.5 bits (127), Expect = 6.150e-7 Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 22 SRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAGSKV 171
+R KW++M + W T KKLR R RKG+PD +RGE WQRL GS V
Sbjct: 37 AREMKWLMMCRNWDYW-SSTGLKKLRERCRKGIPDSMRGEAWQRLVGSAV 85
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A0R3UN10_MESCO (Uncharacterized protein (Fragment) n=1 Tax=Mesocestoides corti TaxID=53468 RepID=A0A0R3UN10_MESCO) HSP 1 Score: 53.5 bits (127), Expect = 8.070e-7 Identity = 26/50 (52.00%), Postives = 32/50 (64.00%), Query Frame = 1
Query: 22 SRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAGSKV 171
+R KW++M + W T KKLR R RKG+PD +RGE WQRL GS V
Sbjct: 77 AREMKWLMMCRNWDYW-SSTGLKKLRERCRKGIPDSMRGEAWQRLVGSAV 125
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A7S2SAE3_9STRA (Hypothetical protein (Fragment) n=1 Tax=Eucampia antarctica TaxID=49252 RepID=A0A7S2SAE3_9STRA) HSP 1 Score: 51.2 bits (121), Expect = 1.260e-6 Identity = 27/57 (47.37%), Postives = 33/57 (57.89%), Query Frame = 1
Query: 7 RLKECSRADKWMVMLNKFGDWR--KGTKSKKLRTRVRKGVPDCVRGEVWQRLAGSKV 171
R + R KW MLN DW+ K K KKLR R+RKG+P+ VRG+ W L G K
Sbjct: 41 RSRNIKREKKWNTMLN---DWKATKSRKKKKLRRRLRKGIPNAVRGQAWVHLQGVKT 94
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: X6ND80_RETFI (TBC domain containing protein (Fragment) n=1 Tax=Reticulomyxa filosa TaxID=46433 RepID=X6ND80_RETFI) HSP 1 Score: 51.6 bits (122), Expect = 1.330e-6 Identity = 23/50 (46.00%), Postives = 31/50 (62.00%), Query Frame = 1
Query: 13 KECSRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAG 162
KE R KW+ ML + G + KL+ R+RKG+P+ VRG VW+RL G
Sbjct: 42 KENERVKKWLFMLEHEQQFFHGNRKSKLKARIRKGIPNAVRGRVWKRLVG 91
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A392NWB4_9FABA (EVI5-like protein (Fragment) n=1 Tax=Trifolium medium TaxID=97028 RepID=A0A392NWB4_9FABA) HSP 1 Score: 50.1 bits (118), Expect = 2.980e-6 Identity = 25/57 (43.86%), Postives = 37/57 (64.91%), Query Frame = 1
Query: 7 RLKECSRADKWMVMLNKFG-DWRKGTKSKK--LRTRVRKGVPDCVRGEVWQRLAGSK 168
R+KE R KW M+ G DW+ + K ++ R+RKG+PDC+RG VWQ ++GS+
Sbjct: 48 RIKEGRRVRKWRKMIGVGGSDWKHYLRRKPYVVKRRIRKGIPDCLRGLVWQLISGSR 104
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A0R3W6G0_TAEAS (Uncharacterized protein n=1 Tax=Taenia asiatica TaxID=60517 RepID=A0A0R3W6G0_TAEAS) HSP 1 Score: 49.3 bits (116), Expect = 4.870e-6 Identity = 24/44 (54.55%), Postives = 28/44 (63.64%), Query Frame = 1
Query: 34 KWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRLAGS 165
KW+ M + W T KKLR R RKG+PD +RGE WQRL GS
Sbjct: 2 KWLDMCRNWDYW-STTGIKKLRERCRKGIPDSMRGEAWQRLVGS 44
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Match: A0A2C9KUS6_BIOGL (Rab-GAP TBC domain-containing protein n=1 Tax=Biomphalaria glabrata TaxID=6526 RepID=A0A2C9KUS6_BIOGL) HSP 1 Score: 51.2 bits (121), Expect = 6.180e-6 Identity = 27/52 (51.92%), Postives = 33/52 (63.46%), Query Frame = 1
Query: 1 KRRLKECSRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQRL 156
K +L E R KW+ ML+K W K +KL RV KG+PDCVRGEVW +L
Sbjct: 71 KAKLVERERTTKWLKMLSK---WDKYFPGEKLTRRVYKGIPDCVRGEVWSKL 119 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32552.8754.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32552.8754.1 >prot_H-paniculata_contig32552.8754.1 ID=prot_H-paniculata_contig32552.8754.1|Name=mRNA_H-paniculata_contig32552.8754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=60bp KRRLKECSRADKWMVMLNKFGDWRKGTKSKKLRTRVRKGVPDCVRGEVWQback to top mRNA from alignment at H-paniculata_contig32552:2041..2220- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32552.8754.1 ID=mRNA_H-paniculata_contig32552.8754.1|Name=mRNA_H-paniculata_contig32552.8754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=180bp|location=Sequence derived from alignment at H-paniculata_contig32552:2041..2220- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32552:2041..2220- >mRNA_H-paniculata_contig32552.8754.1 ID=mRNA_H-paniculata_contig32552.8754.1|Name=mRNA_H-paniculata_contig32552.8754.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=360bp|location=Sequence derived from alignment at H-paniculata_contig32552:2041..2220- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |