mRNA_H-paniculata_contig325.8743.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: D8LMB8_ECTSI (Bardet-Biedl syndrome 2 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LMB8_ECTSI) HSP 1 Score: 323 bits (829), Expect = 3.110e-101 Identity = 162/236 (68.64%), Postives = 195/236 (82.63%), Query Frame = 2
Query: 416 GESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECI---------AGGGGE-TLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
G+ + G RFL+MNR+VT L AGRLE +A RD LLVGSQTNLLA+DVE NADIYYK+V DGVS++LLG LP S QPLALVGGNCS+QGFD+ GTE+FWTVTGDKVSSM MVDA+GDG ++LLVGSDDFE+RVFRREEV+SEITEA++VTHL+ + G E T+W YGLANGT+G+Y+K RRVWRVK K++VT++A FDID DG E+V+GWSNGAI+ARK SNGE+
Sbjct: 6 GDKESGGDTRFLNMNREVTGLAAGRLEESAGRDMLLVGSQTNLLAHDVENNADIYYKDVADGVSAVLLGCLPPSQQPLALVGGNCSVQGFDATGTERFWTVTGDKVSSMTMVDANGDGQRKLLVGSDDFEVRVFRREEVLSEITEAERVTHLQSLDERRRGLETTGEKPENTMWAYGLANGTVGLYNKSRRVWRVKNKNQVTALAIFDIDGDGTAEVVTGWSNGAIMARKASNGEL 241
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A7S1G4Y1_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G4Y1_9STRA) HSP 1 Score: 312 bits (799), Expect = 7.950e-97 Identity = 157/284 (55.28%), Postives = 201/284 (70.77%), Query Frame = 2
Query: 257 FRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPH-----ASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
F+ HLNN I + LA VG YDGK PSLTC TSAGK+ +H PH A+G G G + RFL++NRKVTAL +GRL+ + D+L VG+QTNLLAY+ E N+D+++K+VPDGVS+LL G + + PL +VGGNCSIQGFD+AG E FWTVTGD VS+MA DADGDG+ ELLVGSDDFEIR+FR E+V+SE TE +++ L I T +GY LANGT+GVY++ R+WRVK+K V + SFD+DADG EL++GW +G R NGE+
Sbjct: 6 FQLHLNNGINVRLATVGYYDGKHPSLTCGTSAGKVFIHSPHNREAPAAGGAGGSAYAAGTDPKNQDIRFLNINRKVTALTSGRLQVDGDGDTLCVGTQTNLLAYNTEDNSDLFFKDVPDGVSTLLFGKVQTIEAPLVVVGGNCSIQGFDAAGLELFWTVTGDNVSAMAFCDADGDGNNELLVGSDDFEIRIFRNEDVVSEATETEKIVDLCPIH----LTKYGYALANGTVGVYNRASRIWRVKSKTPVNCIGSFDLDADGAPELLAGWQSGKFEVRNDVNGEL 285
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A7S0E3E9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Phaeocystis antarctica TaxID=33657 RepID=A0A7S0E3E9_9EUKA) HSP 1 Score: 299 bits (766), Expect = 1.730e-94 Identity = 150/281 (53.38%), Postives = 197/281 (70.11%), Query Frame = 2
Query: 254 AFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDK-GRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
AF+ LNNPI GL VGKYDG+ PSLTCAT+AGKI H PH G +++ +FL++NRK++AL GRL +RD L VG+QT LLAYDV++N D+++K+ PDG +++L+G L PLALVGGNCSIQG+D+ G+E+FWTVTGD VS+MA D DGDG ELLVGS+D+EIRVFR EEV+SE TE + V L + + Y LANGT+GVYD+ G+R WRVK+KH+ T++ FD+D DG+ E++SGWSNG + R GE+
Sbjct: 5 AFKLQLNNPILKGLVDVGKYDGEYPSLTCATTAGKIFFHTPHDKS--GQNEV-----------KFLNINRKISALTCGRLATKHQRDLLFVGAQTTLLAYDVQENCDLFFKDAPDGANAILVGKLGDLEAPLALVGGNCSIQGYDAEGSEEFWTVTGDNVSAMAFCDVDGDGQLELLVGSEDYEIRVFRNEEVISETTETEMVVGLAAMR----RATFAYALANGTIGVYDQPGQRKWRVKSKHEATAIVGFDLDGDGQPEVISGWSNGKLEVRSDVTGEL 268
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A8J5XCQ5_DIALT (Uncharacterized protein n=3 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XCQ5_DIALT) HSP 1 Score: 300 bits (768), Expect = 1.950e-92 Identity = 145/280 (51.79%), Postives = 197/280 (70.36%), Query Frame = 2
Query: 254 AFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
AF+ + +PI GLA VGKYDG P LTCAT+AG++ +H PH DQ + E + L++NRK+TA+ AG ++ + +D+LLVG+QT L AYD+ NADI+YK+VPDGV+++ +G + + QPLA+VGGNCSIQGFD G E+FWTVTGD V+ + D D DG E+LVGS+DFEIR+F+ EEV+SE+TE V L + G T +GY LANGT+GVYD+ +RVWRVK+KH V+++A FD+D DG+ EL+SGW+ G + R GEV
Sbjct: 5 AFKLDMKSPILPGLAVVGKYDGLSPCLTCATTAGRVFIHSPHER-----DQFTNAEM------QHLNINRKITAIAAGVIDARSTKDALLVGAQTTLFAYDIRNNADIFYKDVPDGVNAMKVGMINAHDQPLAIVGGNCSIQGFDHEGAEQFWTVTGDNVACLEFCDVDSDGRMEMLVGSEDFEIRIFQDEEVVSEVTETAAVVGLAALRG----TRYGYALANGTIGVYDRNQRVWRVKSKHTVSAIAGFDLDGDGEPELISGWTQGRLEVRSDRTGEV 269
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A7S3BMU4_9EUKA (Hypothetical protein n=2 Tax=Haptolina ericina TaxID=156174 RepID=A0A7S3BMU4_9EUKA) HSP 1 Score: 297 bits (760), Expect = 8.040e-91 Identity = 153/281 (54.45%), Postives = 192/281 (68.33%), Query Frame = 2
Query: 254 AFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDK-GRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
AF+ LNNPI GLA VG Y+G PSLTCATSAGKI H P+ + QI RFL++NRK++AL G+L RD LLVG+QT LLAYDV +N+D+++K+ PDGV+++++GH PLALVGGNCSIQGFD G E FWTVTGD V++M D D DG EL+VGS+DFEIRVFR EEV+SE TE D++ L + + +GY L NGT+GVYDK G R WRVK KH+VTS++ FD+D DG+ EL+SGWS+G R GEV
Sbjct: 5 AFKLELNNPILRGLAAVGSYNGDNPSLTCATSAGKIFFHSPNEKDL--AHQI-----------RFLNINRKISALACGKLSTKLSRDVLLVGAQTTLLAYDVNENSDLFFKDAPDGVNTIVVGHFADQSSPLALVGGNCSIQGFDEQGNEAFWTVTGDNVTTMIFCDVDQDGQLELVVGSEDFEIRVFRAEEVVSETTETDRIVALCPMR----KHTFGYALVNGTVGVYDKPGVRRWRVKAKHEVTSISGFDLDGDGEPELISGWSSGKFEVRSDRTGEV 268
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A7S0T4B9_9CHLO (Hypothetical protein n=1 Tax=Mantoniella antarctica TaxID=81844 RepID=A0A7S0T4B9_9CHLO) HSP 1 Score: 282 bits (721), Expect = 1.800e-90 Identity = 141/285 (49.47%), Postives = 195/285 (68.42%), Query Frame = 2
Query: 239 MKMSAAFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
M + AF+ L + + GLA VGKYDGK P LT ATS GKI +H P+ G++ ++L++N+K++A+ G L+ ++RD LLVG+ T+LLAYDV++N D ++K+VPDGV+++L G P+A+VGGNCSIQGFD G E FWTVTGD V +MA+ D +GDG ELLVGSDDFEIRVF+ EEV+SE+TEA++V L I +GY L NGT+GVYD R WRVK+K++VT+ +FD+D DG E+V+GWS+G + R+ +GE+
Sbjct: 1 MPLVPAFQLRLKDQVLEGLATVGKYDGKHPCLTAATSGGKIFIHNPYQQEADGSNL------------KYLNINKKISAVSHGELDPASKRDVLLVGTNTDLLAYDVDENKDHFFKDVPDGVNAMLCGRFGQQDAPMAVVGGNCSIQGFDMDGEEGFWTVTGDNVHAMALADVNGDGRNELLVGSDDFEIRVFQNEEVISEVTEAERVVGLAPIQA----HRFGYALGNGTVGVYDGTARQWRVKSKNQVTAFCAFDLDGDGVPEVVTGWSSGKLEVRREGSGEM 269
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A7S0L2Q7_9EUKA (Hypothetical protein n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0L2Q7_9EUKA) HSP 1 Score: 295 bits (754), Expect = 3.210e-90 Identity = 153/284 (53.87%), Postives = 193/284 (67.96%), Query Frame = 2
Query: 245 MSAAFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGR-RVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
M AF+ LNN I LA VGKYDG+ PSLTCAT+AGKI H PH E D + RFL++NRK++ L +G L + R++LLVG+QT LLAYDV +N D+++K+ PDGV+++++G + L+PLALVGGNCSIQGFD G E FWTVTGD VS+M D D DG ELLVGSDDFEIRVFR EEV+SE TE D+ L + +GYGLANGT+GVYDK R WRVK+K+ VT++ FD+D DG+ E++SGW NG R +GEV
Sbjct: 1 MLPAFKLQLNNAILKRLAAVGKYDGEHPSLTCATNAGKIFFHSPH-------------EKDKNNEVRFLNINRKISTLSSGPLISKSSRETLLVGAQTTLLAYDVLENRDLFFKDAPDGVNTVVVGVIGDLLEPLALVGGNCSIQGFDHEGNEAFWTVTGDNVSAMTFCDVDEDGQLELLVGSDDFEIRVFRNEEVISETTETDRPICLASLR----RHTFGYGLANGTIGVYDKPAVRRWRVKSKYAVTAVHGFDLDGDGQPEIISGWDNGKFEVRSDRSGEV 267
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A7S1IWS5_9EUGL (Hypothetical protein n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S1IWS5_9EUGL) HSP 1 Score: 294 bits (753), Expect = 4.720e-90 Identity = 143/284 (50.35%), Postives = 198/284 (69.72%), Query Frame = 2
Query: 242 KMSAAFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
+++ AF L N I+ GLA V K++G++P LTCAT+ GK+ +H PH RG + +D ++L++NR VTAL +G L ++ D LLVG+QTNLLAYDVE+N D++Y+EVPDG++S+ G + S LA+VGGNCSIQGFD+ G E FWTVTGD V+++A++D D D ELLVGS+D+EIR+F+ EEV+SE TE D++ L + G T +GY L NGT+G+YD+ RVWR K+KH+V + +D+DADG EL+SGW NG + R NGEV
Sbjct: 6 QLTPAFELTLKNTIQEGLATVAKFNGEQPCLTCATAGGKVFIHNPHE---RGDLTVEQPSADAQKNIKYLNINRTVTALASGPLNPKSKNDILLVGTQTNLLAYDVEQNKDVFYREVPDGINSMTFGKVGSIEDQLAIVGGNCSIQGFDADGNELFWTVTGDNVTALALIDIDEDQQNELLVGSEDYEIRIFQNEEVISETTETDRLLALSPLYG----TRFGYALGNGTIGIYDRATRVWRFKSKHQVVCVDGYDLDADGVPELISGWHNGKVEVRSDKNGEV 282
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: UPI001B88DF7C (Bardet-Biedl syndrome 2 protein homolog n=1 Tax=Gigantopelta aegis TaxID=1735272 RepID=UPI001B88DF7C) HSP 1 Score: 291 bits (745), Expect = 1.250e-88 Identity = 139/279 (49.82%), Postives = 196/279 (70.25%), Query Frame = 2
Query: 257 FRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
F LN+ + + +GKYDG PSL+CAT+AGK+++H PH G + E D L++N++VT++ AG L+G A +D L+VG+QTN+LAYDVE N+D++YK+ PDG +++++G L S PLA++GGNCSIQGFD G + FWTVTGD V S+AM+D + DG EL+VGS+DF+IR+FR +E+++EITE + +T L + T +GY LANGT+GVYD+ R WR+K+K+ S+ SFD+D+DG ELV+GWSNG I AR GEV
Sbjct: 6 FTLKLNHKVNARMVTIGKYDGTNPSLSCATTAGKVIIHNPHNRGQNTGRMSLSAEGDIS----LLNINQQVTSVCAGVLDGNAAKDVLVVGTQTNVLAYDVENNSDLFYKDTPDGSNAIIVGKLGSIETPLAIIGGNCSIQGFDKGGNDSFWTVTGDNVCSLAMLDFNADGQNELIVGSEDFDIRIFREDEIIAEITETEAITSLCPMR----NTRFGYALANGTVGVYDRTSRYWRIKSKNYAVSILSFDLDSDGVPELVTGWSNGKIDARSDRTGEV 276
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Match: A0A1S3JJV5_LINUN (Bardet-Biedl syndrome 2 protein homolog n=3 Tax=Lingula unguis TaxID=7574 RepID=A0A1S3JJV5_LINUN) HSP 1 Score: 290 bits (742), Expect = 2.160e-88 Identity = 140/279 (50.18%), Postives = 199/279 (71.33%), Query Frame = 2
Query: 257 FRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGVRGTDQIMHGESDDDGGPRFLSMNRKVTALKAGRLEGTAERDSLLVGSQTNLLAYDVEKNADIYYKEVPDGVSSLLLGHLPSSLQPLALVGGNCSIQGFDSAGTEKFWTVTGDKVSSMAMVDADGDGHQELLVGSDDFEIRVFRREEVMSEITEADQVTHLECIAGGGGETLWGYGLANGTMGVYDKGRRVWRVKTKHKVTSMASFDIDADGKEELVSGWSNGAIIARKVSNGEV 1093
F LN+ I + VGKYDGK P LTCAT+AGK+ +H PH G RG M G +D D L++N+ V+A+ AGRL+ + D L+VG+QTNLLAYDV+ N+D++Y++ PDG +++++GHL S PLA+VGGNCS+ G+D G + FWTVTGD V S+AM+D +GDG EL+VGS+DF+IR+F+ +E+++E+TE + +T L + G + +GY LANGT+GVYD+ R WR+K+K++ ++ SFD+D DG EL++GWSNG I AR GEV
Sbjct: 6 FTLKLNHKINPRMVTVGKYDGKHPCLTCATTAGKVFIHNPHTRGERGGR--MEGSADTD--ISLLNINQAVSAVCAGRLDASKPNDILMVGTQTNLLAYDVDNNSDLFYQDTPDGSNAIIVGHLGSIDTPLAVVGGNCSLHGYDYEGNDPFWTVTGDNVCSLAMLDFNGDGVNELIVGSEDFDIRIFKEDEIIAEMTETETITSLCKMMG----SRFGYALANGTVGVYDRTARYWRIKSKNQAVTINSFDLDGDGVPELITGWSNGKIDARSDRTGEV 276 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig325.8743.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig325.8743.1 >prot_H-paniculata_contig325.8743.1 ID=prot_H-paniculata_contig325.8743.1|Name=mRNA_H-paniculata_contig325.8743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=287bp MKMSAAFRFHLNNPIEIGLACVGKYDGKRPSLTCATSAGKILVHCPHASGback to top mRNA from alignment at H-paniculata_contig325:34055..40960+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig325.8743.1 ID=mRNA_H-paniculata_contig325.8743.1|Name=mRNA_H-paniculata_contig325.8743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6906bp|location=Sequence derived from alignment at H-paniculata_contig325:34055..40960+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig325:34055..40960+ >mRNA_H-paniculata_contig325.8743.1 ID=mRNA_H-paniculata_contig325.8743.1|Name=mRNA_H-paniculata_contig325.8743.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1722bp|location=Sequence derived from alignment at H-paniculata_contig325:34055..40960+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |