mRNA_H-paniculata_contig32493.8741.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: D7FU67_ECTSI (Glucose-6-phosphate isomerase, cytosolic n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FU67_ECTSI) HSP 1 Score: 148 bits (373), Expect = 8.100e-42 Identity = 73/103 (70.87%), Postives = 93/103 (90.29%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H+KRI +KHLKDVM +RSL+LSAE+EGTILD+SRMNVSQLTMKLL+D AKRQ L ++I+AM+ GEKINNTE+RAVLHVALR++++DPPI VD V+V++QV+
Sbjct: 158 HQKRIKNKHLKDVMALEDRSLALSAEFEGTILDYSRMNVSQLTMKLLLDLAKRQNLNKRITAMFEGEKINNTENRAVLHVALRSHRDDPPIYVDDVDVIQQVH 260
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A836C893_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836C893_9STRA) HSP 1 Score: 112 bits (280), Expect = 1.060e-26 Identity = 59/103 (57.28%), Postives = 74/103 (71.84%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H + I HL+DVM D R +LSAE+EG+ LD+SRM V+Q TM LL A+RQ LK KI AM G+KIN TE RAVLH LR+ +D PI+VDGVNVV++V+
Sbjct: 33 HARHIKRMHLRDVMGDAARCEALSAEFEGSFLDYSRMQVTQRTMDLLYALARRQNLKLKIEAMCRGDKINTTEGRAVLHTVLRSAPDDAPIVVDGVNVVEEVH 135
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A836CFZ0_9STRA (Glucose-6-phosphate isomerase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CFZ0_9STRA) HSP 1 Score: 110 bits (274), Expect = 5.940e-26 Identity = 57/103 (55.34%), Postives = 75/103 (72.82%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H + I HL+DV+ R +LSAE+EG+ LD+SRM V+Q TM LL A+RQ L+EKI+AM G+K+N TE RAVLH ALR+ +D PI+VDGVNVV+ V+
Sbjct: 33 HARHIAKMHLRDVLGVASRCEALSAEFEGSFLDYSRMQVTQRTMDLLYALARRQRLREKIAAMCRGDKVNVTEGRAVLHTALRSAPDDAPIVVDGVNVVEDVH 135
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A2P6V0L1_9CHLO (Glucose-6-phosphate isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0L1_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 2.970e-22 Identity = 51/103 (49.51%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H K I HL+D++ D ER+ +L E+ G +DFSR N++++TM+LL++ A+R L+ K++AM+ GE INNTEDRAVLH ALR + D + VDG NVV V+
Sbjct: 42 HTKEIESLHLRDLLLDEERTDNLIREHNGLYVDFSRQNITEVTMQLLLNLAERAKLRSKMNAMFAGEHINNTEDRAVLHAALRMPR-DEAVYVDGANVVPDVW 143
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A2P6V0P9_9CHLO (Glucose-6-phosphate isomerase n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V0P9_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 3.160e-22 Identity = 51/103 (49.51%), Postives = 73/103 (70.87%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H K I HL+D++ D ER+ +L E+ G +DFSR N++++TM+LL++ A+R L+ K++AM+ GE INNTEDRAVLH ALR + D + VDG NVV V+
Sbjct: 447 HTKEIESLHLRDLLLDEERTDNLIREHNGLYVDFSRQNITEVTMQLLLNLAERAKLRSKMNAMFAGEHINNTEDRAVLHAALRMPR-DEAVYVDGANVVPDVW 548
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A250XGL0_9CHLO (Glucose-6-phosphate isomerase n=1 Tax=Chlamydomonas eustigma TaxID=1157962 RepID=A0A250XGL0_9CHLO) HSP 1 Score: 99.4 bits (246), Expect = 4.150e-22 Identity = 53/103 (51.46%), Postives = 70/103 (67.96%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H I HL+D+M D R +SL E EG +DFSR V+ T+KLL++ A+ GL+EKI M+ GE+IN+TEDRAVLHVA R + D IMV+G NVV +V+
Sbjct: 93 HVAEIDKTHLRDLMADERRCMSLIKESEGLYVDFSRQRVTAETVKLLVNLAEAAGLREKIDGMFKGERINSTEDRAVLHVATRA-RRDQTIMVEGKNVVPEVW 194
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A2V3IKD9_9FLOR (Glucose-6-phosphate isomerase n=1 Tax=Gracilariopsis chorda TaxID=448386 RepID=A0A2V3IKD9_9FLOR) HSP 1 Score: 99.0 bits (245), Expect = 5.630e-22 Identity = 51/104 (49.04%), Postives = 77/104 (74.04%), Query Frame = 1
Query: 1 HKKRIGDK-HLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
HK+ I D+ HL++++ D ER L L+AEY+G +D+SR +S T KLL++ A+ LK++I M +G++IN TE+RAVLH ALR K++ +M+DGVNVV+QV+
Sbjct: 82 HKESIIDQTHLRELLDDDERVLQLAAEYDGVFMDYSRQRISLETKKLLLELAEAVNLKQRIKDMVSGKRINTTENRAVLHTALRAKKSEV-VMLDGVNVVEQVH 184
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: E1ZJE0_CHLVA (Glucose-6-phosphate isomerase n=1 Tax=Chlorella variabilis TaxID=554065 RepID=E1ZJE0_CHLVA) HSP 1 Score: 97.8 bits (242), Expect = 1.440e-21 Identity = 51/103 (49.51%), Postives = 72/103 (69.90%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H K + HL+D++ D ER+ SL E+ G +DFSR NV++ TM+LL++ A+R L+ K++AM+ GE INNTEDR+VLH ALR + D + VDG NVV V+
Sbjct: 84 HTKEVESLHLRDLLVDEERTDSLVREHNGLYVDFSRQNVTETTMQLLLNLAERAKLRTKMNAMFAGEHINNTEDRSVLHTALRMPR-DEEVYVDGQNVVPDVW 185
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A7S3FRE0_9CHLO (Glucose-6-phosphate isomerase n=1 Tax=Chloropicon roscoffensis TaxID=1461544 RepID=A0A7S3FRE0_9CHLO) HSP 1 Score: 97.4 bits (241), Expect = 1.980e-21 Identity = 52/103 (50.49%), Postives = 69/103 (66.99%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H I + HL+ +++D ER L LS E+ G DFSR V+ T++LL D AK GLKEKI M+ GE+IN TE R+VLHVA R ++N ++VDG NVVK V+
Sbjct: 98 HIPEIEETHLRYLLKDEERCLRLSLEHNGLYSDFSRQRVTPKTLELLFDLAKEAGLKEKIEQMFQGEQINETEHRSVLHVATRADRNQE-LIVDGKNVVKDVW 199
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Match: A0A2P6TB77_CHLSO (Glucose-6-phosphate isomerase n=3 Tax=Chlorella sorokiniana TaxID=3076 RepID=A0A2P6TB77_CHLSO) HSP 1 Score: 97.4 bits (241), Expect = 2.100e-21 Identity = 51/103 (49.51%), Postives = 71/103 (68.93%), Query Frame = 1
Query: 1 HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFAKRQGLKEKISAMYNGEKINNTEDRAVLHVALRTNKNDPPIMVDGVNVVKQVY 309
H K I HL+D + D ER+ +L E+ G +DFSR N+++ TM+LL++ A+R L+ K++AM+ GE INNTEDRAVLH ALR + D + VDG NVV V+
Sbjct: 935 HTKEIEKLHLRDQLMDEERTDALIHEHNGLYVDFSRQNINETTMQLLLNLAERAKLRTKMNAMFAGEHINNTEDRAVLHTALRAPR-DSEVFVDGKNVVPDVW 1036 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32493.8741.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32493.8741.1 >prot_H-paniculata_contig32493.8741.1 ID=prot_H-paniculata_contig32493.8741.1|Name=mRNA_H-paniculata_contig32493.8741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=104bp HKKRIGDKHLKDVMQDTERSLSLSAEYEGTILDFSRMNVSQLTMKLLMDFback to top mRNA from alignment at H-paniculata_contig32493:1066..2343+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32493.8741.1 ID=mRNA_H-paniculata_contig32493.8741.1|Name=mRNA_H-paniculata_contig32493.8741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1278bp|location=Sequence derived from alignment at H-paniculata_contig32493:1066..2343+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32493:1066..2343+ >mRNA_H-paniculata_contig32493.8741.1 ID=mRNA_H-paniculata_contig32493.8741.1|Name=mRNA_H-paniculata_contig32493.8741.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=624bp|location=Sequence derived from alignment at H-paniculata_contig32493:1066..2343+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |