mRNA_H-paniculata_contig3245.8731.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: A0A6H5L0L8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L0L8_9PHAE) HSP 1 Score: 230 bits (587), Expect = 2.590e-62 Identity = 150/449 (33.41%), Postives = 252/449 (56.12%), Query Frame = 3
Query: 75 WLYLLGRMWFCRRSFAIAARSPTMVCVAMGYGLVMVISVFIHWILLAERKSMEREAGGLPCEVMFVLSYSFYPFFIIPYMLRAMRLVVVYNSTYRREYARYVKWKALVKVWITSCILIFSGATLVYFDIPERYDRHTYGCFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGRELVVVVATSVSVSVLEFILQGLVRNEILPHSSRMHLITELLAISKVVNIFVWSVLLPMAQHDN---WLCCRTKPSTAFNAAGNSKSVNPIADAETA--EVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQ--SITHSEEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKFNQSEEMKRQLDAKKKQQDELEQARKDAEGDTSLQQLMEIARGGYIPESR 1400
W+ LL R+ R F IAARSP +V + ++ +SV + W+LL +PC V+ +SY+ + IIPY +R +RLVV YN +YR ++AR+VKW ++++W + I + A + P + + + CF++++ +L A T +P +++ ++ V DAF+I +E+ + +S+S++ +LQ LV E+L SS +H E +A + +F +++P+ H W+ KPS V P+ D ++ +V+G+ L + D+ + FG+F ++ LCMESW+FIL+AV Y+ S ++Q+ F +L+QYL P+SP EVN+S + +A+ R AF L+ RR IL EPL IVR+LEQNLL+KF ++R+ AK+ E +QA +A+GD +L LM++++ +P S+
Sbjct: 23 WIGLLVRLHVLRHEFEIAARSPQLVILTGFTCYLLSLSVVVQWMLLCV-------GTNIPCWVVIWVSYAVFALGIIPYFIRVVRLVVAYNQSYRAKFARFVKWTPMMRIWAGATIGLVLRAVFFFGSKPVHFSSNAHECFYFDDILLMTGACAFTGVPILLIARSLIHVFDAFRIRQEMERAIGICMSLSMVIVLLQVLVYFEVLADSSELHFAVEAMAFLFGIQVFTHGLMVPLLAHYKEYGWV----KPS-----------VLPVEDETSSNEDVDGVYALAVKG--GDMADRFGRFVQENLCMESWDFILDAVKYEMESSCEPDDQFDEFLILLNQYLLPTSPDEVNISSKMSKRMASFKTREAFTQLEQEERRGILKEPLDEIVRMLEQNLLNKFQSRIALERE--AKR----EAQQA--EAKGDPALMALMKVSQ--TVPRSK 437
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: A0A6H5JLH7_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JLH7_9PHAE) HSP 1 Score: 201 bits (510), Expect = 1.540e-53 Identity = 115/325 (35.38%), Postives = 184/325 (56.62%), Query Frame = 3
Query: 312 MLRAMRLVVVYNSTYRREYARYVKWKALVKVWITSCILIFSGATLVYFDIPERYDRHTYGCFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGRELVVVVATSVSVSVLEFILQGLVRNEILPHSSRMHLITELLAISKVVNIFVWSVLLPMAQHDNWLCCRTK---PSTAFNAAGNSKSVNPIADAETAEVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSITHSEEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKFNQSEEMKR 1277
MLRA+R+VV+Y+S YR +YA VKW L K W + +L+ A ++Y I R+ RH YGC F+EE ++ + A L + + +V D +K+ RE V S + + ++Q L + + + +HL+ E+LA+ +++ W VL+ + HD W T P+ + + +++S P +G+L E V +F Q+C + LC ESW+FI+ A Y+ I+ EEQY F RI ++YLRP+SPQEVN+S ++ + +L F +LD + RR +L EPL +VR+LE+NLL+KF Q+ EM++
Sbjct: 1 MLRAVRIVVIYHSAYRYKYAGLVKWTKLRKAWASITLLMVVVAIILY-AISARHYRHDYGCAFFEETIVIGTMALLNAPGFTFLLFKLSQVQDVYKLRREFTWVFNAVSSSTYVYILIQVLYKTGAVTETRTLHLVLEILALVIMLSFLFWMVLISVGIHDGWRWFGTSTVVPTEGWAVSASNRSSGP------THGDGVLGYAQEG--GSVASMFEQYCMRSLCAESWDFIVAACKYEEISDPEEQYKMFLRITEEYLRPTSPQEVNISSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEVVRMLEENLLNKFKQTPEMRK 316
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: A0A6H5KD71_9PHAE (RGS domain-containing protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KD71_9PHAE) HSP 1 Score: 176 bits (445), Expect = 5.820e-45 Identity = 105/311 (33.76%), Postives = 174/311 (55.95%), Query Frame = 3
Query: 444 LVYFDIPERYDRHTYGCFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGRELVVVVATSVSVSVLEFILQGLVRNEILPHSSRMHLITELLAISKVVNIFVWSVLLPMAQHDNWLCC---RTKPSTAFNAAGNSKSVNPIADAETAEVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSITHSEEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKFNQSEEMKRQLDAKKKQQDELEQARKDA-EGDTSLQQLM 1364
++ + I R+ RH YGC F+EE ++ ++ A + L Y + +V D FK+ RE V SV+ + ++Q L + + + +HL+ E+L + ++N+ W VL+ +A HD W R P+ + + +++S P +G+L E V +F FC + LC ESW+FI+ A Y+ I+ EEQY F RI ++YL+P+SPQEVN+ ++ + +L F +LD + RR +L EPL IVR+LE+NLL+KF Q+ EM++ + ++Q +EQA A EGD +++Q +
Sbjct: 6 IILYAISARHYRHDYGCAFFEETIVLGTMMLLNAPGFVFLLYKLSQVQDVFKLRREFTWVFNVVSSVTSVYMLIQVLYKTGAVTETRTLHLVLEILTLVVMLNVLFWMVLISVAIHDGWCWFGTPRVVPTEGWAVSASTRSSGP------THGDGVLGYAQEG--GSVASMFKHFCTRSLCAESWDFIVAACKYEEISDPEEQYEMFLRITEEYLQPTSPQEVNIGSKMQAKMVSLQDSVKFSSLDGDSRRNVLQEPLKEIVRMLEENLLNKFKQTPEMRKWREDLERQDWFIEQANSAAAEGDENMRQQL 308
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: A0A6H5K5R8_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K5R8_9PHAE) HSP 1 Score: 176 bits (445), Expect = 9.600e-45 Identity = 114/329 (34.65%), Postives = 174/329 (52.89%), Query Frame = 3
Query: 306 PYMLRAMRLVVVYNSTYRREYARYVKWKALVKVWITSCILIFSGATLVYFDIPERYDRHTYGCFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGRELVVV-VATSVSVSVLEFILQGLVRNEILPHSSRMHLITELLAISKVVNIFVWSVLLPMAQHDN-----WLCCRTKPSTAFNAAGNSKSVNPIADAETAEVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSITHS-------EEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKF 1253
PY++RA+RLVV YN YR +YAR+VK + W CI + A + + P Y CF+W++ +L L+ P L + RV DAFK+ EL V + S V+VL +++Q LV E+L +S +H++ E+ A+ +NI + +LLPM + W P V+ +V+G++ L S ++ E FG+FCR+ LCMESW+F+++ V Y+ + S +EQ++ F IL+ YL P+SP E+N+S ++ +A R AF L R +I EP IVR+LEQNLL+KF
Sbjct: 6 PYVIRAVRLVVAYNRKYRLKYARFVKRNYALGFWAVGCIGLTIRAGIFFGTDPAHYSSDMRECFYWDDIMLMGAVLLFGGAPMSCLAIRISRVHDAFKLREELCFVFIGCSCCVAVL-WVIQVLVELELLSDTSALHVVVEVQALLIGMNIGLSGLLLPMVRAHRGGVKAWFRATVVP------------VDETVAVSALDVDGVVGLASSG--GEMAEQFGKFCRENLCMESWDFLVDVVRYERMAPSPIARNPEDEQFNCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLGLEERVSIFKEPFDEIVRVLEQNLLNKF 319
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: A0A6H5KE83_9PHAE (RGS domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KE83_9PHAE) HSP 1 Score: 116 bits (291), Expect = 1.730e-23 Identity = 84/298 (28.19%), Postives = 139/298 (46.64%), Query Frame = 3
Query: 492 CFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGRELVVVVATSVSVSVLEFILQGLVRNEILPHSSRMHLITELLAISKVVNIFVWSVLLPMAQHDN-----WLCCRTKPSTAFNAAGNSKSVNPIADAETAEVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSITHS---------------------------------------EEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKF 1253
CF+W++ +L ++++ P L + RV+DAFKI EL V + + +++Q LV ++L +S +H++ ++ A+ +NI + +LLPM + W P V+ +V+G++ L S + ++ E FG+FCR+ LCMESW+ +++ V Y+ + S +EQ F IL+ YL P+SP E+N+S ++ +A R AF L R +I EP IVR+LEQNLL+KF
Sbjct: 194 CFYWDDIILVGVMILSSGPPMSCLAIRISRVNDAFKIREELCFVFIGCSCCAAVLWVIQVLVELDLLSDTSALHVVVQVQALLIGMNIGISGLLLPMVRTHRGGVKAWFRATVVP------------VDETVAVSALDVDGVVGLAS--SVGEMAEQFGKFCRENLCMESWDLLVDVVRYERMVPSPSNIFCRVGFDTRWSCLWNFSHPNGLTWFVRFADRENPEDEQLKCFLHILNHYLLPTSPDEINISSAMHKRIAPFRTREAFNKLSLEERVSIFKEPFDEIVRVLEQNLLNKF 477
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: D8LQW8_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQW8_ECTSI) HSP 1 Score: 101 bits (251), Expect = 1.730e-20 Identity = 58/143 (40.56%), Postives = 87/143 (60.84%), Query Frame = 3
Query: 855 SVNPIADAETAEVN---GILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSITHS-------EEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKF 1253
+V P+ + T + + G+L L S ++ + FG+FC++ LCMESW+F+++ V Y+ I S +EQ+++F IL+QYL P+SP E+N+S S+ + A R AF L R IL EP IVR+LEQNLL+KF
Sbjct: 16 TVVPVEEVFTVQASDECGVLRLASGG--GELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLIANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTREAFNELSLEERVGILKEPFDEIVRMLEQNLLNKF 156
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: D8LQX1_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LQX1_ECTSI) HSP 1 Score: 101 bits (252), Expect = 5.590e-20 Identity = 67/173 (38.73%), Postives = 98/173 (56.65%), Query Frame = 3
Query: 765 SVLLPMAQHDNWLCCRTKPSTAFNAAGNSKSVNPIADAETAEVN---GILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSITHS-------EEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKF 1253
S+LLPMA+ R F A +V P+ + T + + G+L L S ++ + FG+FC++ LCMESW+F+++ V Y+ I S +EQ+++F IL+QYL P+SP E+N+S S+ + A R AF L R IL EP IVR+LEQNLL+KF
Sbjct: 59 SLLLPMARAH-----RGGVQEWFRA-----TVVPVEEVFTVQASDECGVLRLASGG--GELAQQFGKFCQENLCMESWDFLVDVVRYERIAPSLVANDPEDEQFNSFLFILNQYLLPTSPDEINISSSMSTRILAFGTRDAFNELSLEERIGILGEPFDEIVRMLEQNLLNKF 219
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: D8LJ87_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LJ87_ECTSI) HSP 1 Score: 89.7 bits (221), Expect = 8.430e-15 Identity = 101/372 (27.15%), Postives = 160/372 (43.01%), Query Frame = 3
Query: 309 YMLRAMRLVVVYNSTYRREYARYVK----WKALVKVWITSCILI------FSGAT-----LVYFDIPERYDRHTYGCFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGRELVVVVATSVSVSVLEFILQGLVR-------NEILPHSSRMHLITELLAISKVVNIFVWSVLLPMAQHDNWLCCRTKPSTAFNAAGNSKSVNPI------------------------------ADAETAEVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEA-VHYQSITHSEEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAA-LHKRSAFLALDDNRRRTILDEPLGAIVRLLEQNLLSKFNQS 1262
Y+LRA RLVVVY+ RR++ R VK KA+ + C++ F+GA ++FD ER+ FF+ +L+L A+ A A + +DAFKI E+ V + S + L +E P + + +L A S V+ I + +P AF G+ +S++ I D E G+L + T + L FC + LC ES +F+++ ++Y+S++ +EQ+ A + I++ YL S EVN+S + RN A L KR FLAL++ R +LD I ++L +NLL KF Q+
Sbjct: 41 YLLRAARLVVVYDRELRRKFQRLVKPSVQRKAMAAALVPCCLIALVVQLRFAGARSNAGQCLFFD--ERWS------FFFPTTLLYLMAMAAMANK-------LKNTNDAFKIRDEICYVCVATAITSATRTVHTSLAHTTWWGDLDETFPPT-----VNDLGACSAVLYISFY-----------------RPLKAFYGVGSHRSLHGIHAARRIYSGDXXXXXXXXXXXXXXXXXXXWGDERKPETWGVLQMLRNGT---LRGLLINFCEESLCGESVDFLVDVTINYESLSDPDEQFGALSDIVENYLAEGSANEVNVSNAYRNAAALWLTKREEFLALEEETRAHVLDLQRDEIAKMLAENLLVKFKQA 372
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: D8LLA9_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LLA9_ECTSI) HSP 1 Score: 74.7 bits (182), Expect = 4.290e-10 Identity = 101/434 (23.27%), Postives = 180/434 (41.47%), Query Frame = 3
Query: 99 WFCRRSFAIAARSPTMVCVAMGYGLVMVISVFIHWILLAERKSMEREAGGLPCEVMFVLSYSFYPF----FIIPYMLRAMRLVVVYNSTYRREYARYVKWKA-LVKVWITSCILIFSGATLVYFDIPERYDRHTYGCFFWEEDVLFLPALVATAIPTIILTYLMLRVDDAFKIGREL------------VVVVATSVSVSVLEFILQGLVRNEILPHSSRMHLITELLAISK-----------------VVNIFVWSVLLPMAQHDNWLCCRTKPSTAFNAAGN-SKSVNPIADAETAEVNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVH-----YQSITHSEEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKRSAF--LALDDNRRRTILDEPLGAIVRLLEQNLLSKFNQSEEMK 1274
W R+ F A RSP ++ + G +LA ++ R +F+L P ++ Y+LR +R++V+Y + R+ + RY+K +A +VKV +T+ +++ A +V + + V+ L A +A L + R D FK+ E+ +++ S+ VLEF L +L ++ R H+I L I + +F + +P +H + + A+ + SKS + DA + ++L E F +FCRK LC ES F+ A Y S + + ++ F I D+Y++ SP E+N+ ++ + + AF L LDD R LD + ++L++NL KF Q+++ K
Sbjct: 32 WVLRKDFYFAVRSPVLMTASGLAG------------VLAGSTAVSRTVMFPGLRSLFILRIFSIPLTALCLVVAYILRGLRVIVMYTPSRRQRWGRYLKKEAAMVKVLLTAYVIVEVAAWIVVRHVGLARVASFMVTVVKIDTVVTLSASLA-------LFGQLRRTQDVFKVSLEIQRAGACALLTSVMIMFLGSIPAGVLEFYL-------VLFYTVRFHVILWLTNIQPARERLGRRDATPNTRGIMAKLFPY---VPWRKHGGTVAIDSAECMVLAASTHCSKSTVKLDDAMEEILRCPVLL----------EAFEEFCRKALCSESILFLKAAWAFNDSVYASTANEDTNFALFMDIFDKYIKDGSPFEINIESKTKSFIMKRTDKEAFKQLRLDDAARG--LDAAAKEVGKMLKENLYDKFRQTDQFK 424
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Match: D7FYH4_ECTSI (RGS domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FYH4_ECTSI) HSP 1 Score: 65.5 bits (158), Expect = 2.610e-9 Identity = 33/89 (37.08%), Postives = 54/89 (60.67%), Query Frame = 3
Query: 891 VNGILILTSENTHADVGELFGQFCRKYLCMESWEFILEAVHYQSI--THSEEQYSAFARILDQYLRPSSPQEVNLSGSLRNNLAALHKR 1151
V G+L L E D+ + F +C+ LC+ESW+F+++A Y+ + T ++EQ+ F I D+YL +SP EVN+S + ++AA R
Sbjct: 4 VEGVLALVREG--GDMSKRFEHYCKTNLCLESWDFLVDATLYEMMDATDADEQFMTFTMISDRYLLATSPDEVNISSATSKHVAAFRTR 90 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3245.8731.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 12
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3245.8731.1 >prot_H-paniculata_contig3245.8731.1 ID=prot_H-paniculata_contig3245.8731.1|Name=mRNA_H-paniculata_contig3245.8731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=468bp MQAGSAILIVLMLVVGCPWLYLLGRMWFCRRSFAIAARSPTMVCVAMGYGback to top mRNA from alignment at H-paniculata_contig3245:1170..11067+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3245.8731.1 ID=mRNA_H-paniculata_contig3245.8731.1|Name=mRNA_H-paniculata_contig3245.8731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9898bp|location=Sequence derived from alignment at H-paniculata_contig3245:1170..11067+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3245:1170..11067+ >mRNA_H-paniculata_contig3245.8731.1 ID=mRNA_H-paniculata_contig3245.8731.1|Name=mRNA_H-paniculata_contig3245.8731.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2808bp|location=Sequence derived from alignment at H-paniculata_contig3245:1170..11067+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |