mRNA_H-paniculata_contig32331.8710.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: D7G1V7_ECTSI (Myb-like DNA-binding domain containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G1V7_ECTSI) HSP 1 Score: 91.3 bits (225), Expect = 2.170e-20 Identity = 38/47 (80.85%), Postives = 45/47 (95.74%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
DP+I+KG W+PEEEA++ K+RAE+GNRWSEIAKRLPGRTDNQVKNFW
Sbjct: 70 DPSIKKGTWTPEEEALITKTRAEIGNRWSEIAKRLPGRTDNQVKNFW 116
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A7S1XJ32_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XJ32_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.700e-17 Identity = 35/47 (74.47%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
DP I KGAW+PEEE IM ++ ELGN+WSEIAKRLPGRTDN VKN W
Sbjct: 106 DPTINKGAWTPEEEQIMVEAHKELGNKWSEIAKRLPGRTDNHVKNHW 152
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: D7FMG3_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMG3_ECTSI) HSP 1 Score: 81.6 bits (200), Expect = 6.940e-17 Identity = 35/47 (74.47%), Postives = 43/47 (91.49%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
+P+I+K AW+P+EE IMA++RA+LGNRWSEIAK LPGRTDNQVKN W
Sbjct: 76 NPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKNHW 122
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A835YH49_9STRA (Homeodomain-like protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YH49_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 1.290e-15 Identity = 32/46 (69.57%), Postives = 36/46 (78.26%), Query Frame = 1
Query: 4 PAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
P I K W+ EEE IMA++ ELGN+WSEIAKRLPGRTDN VKN W
Sbjct: 58 PGISKAPWTTEEEQIMAQAHEELGNKWSEIAKRLPGRTDNHVKNHW 103
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A835ZL73_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZL73_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 1.570e-15 Identity = 33/46 (71.74%), Postives = 38/46 (82.61%), Query Frame = 1
Query: 4 PAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
P I K W+P+EE +MA++ AELGNRWSEIAKRLPGRTDN VKN W
Sbjct: 92 PGISKAPWTPQEERVMAQAHAELGNRWSEIAKRLPGRTDNHVKNHW 137
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A6H5L4X1_9PHAE (MYB protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L4X1_9PHAE) HSP 1 Score: 77.4 bits (189), Expect = 2.150e-15 Identity = 34/45 (75.56%), Postives = 42/45 (93.33%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKN 135
+P+I+K AW+P+EE IMA++RA+LGNRWSEIAK LPGRTDNQVKN
Sbjct: 63 NPSIKKNAWTPDEERIMAEARAKLGNRWSEIAKLLPGRTDNQVKN 107
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A7S2HWM9_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2HWM9_9EUKA) HSP 1 Score: 73.6 bits (179), Expect = 6.980e-15 Identity = 31/47 (65.96%), Postives = 39/47 (82.98%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
DPAIRK AWS +E+A++ +AELGN+W+EIAK LPGRTDN +KN W
Sbjct: 9 DPAIRKDAWSTDEDAMLIAKQAELGNKWAEIAKFLPGRTDNAIKNHW 55
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A7S0XE44_9STRA (Hypothetical protein (Fragment) n=1 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XE44_9STRA) HSP 1 Score: 73.2 bits (178), Expect = 9.640e-15 Identity = 32/47 (68.09%), Postives = 36/47 (76.60%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
DP I K W+ EEE IM ++ ELGN+WSEIAKRLPGRTDN VKN W
Sbjct: 15 DPNINKDLWTEEEERIMTEAHKELGNKWSEIAKRLPGRTDNHVKNHW 61
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A2R5FYY8_9STRA (Transcription factor MYB118 n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5FYY8_9STRA) HSP 1 Score: 75.5 bits (184), Expect = 1.020e-14 Identity = 33/47 (70.21%), Postives = 37/47 (78.72%), Query Frame = 1
Query: 1 DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
DP IRK W+ EEEAIMAK+ LGNRWSEI+K LPGRTDN +KN W
Sbjct: 67 DPTIRKDPWTAEEEAIMAKAHQRLGNRWSEISKLLPGRTDNAIKNHW 113
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Match: A0A7C8YXH3_OPUST (Uncharacterized protein (Fragment) n=1 Tax=Opuntia streptacantha TaxID=393608 RepID=A0A7C8YXH3_OPUST) HSP 1 Score: 71.2 bits (173), Expect = 1.100e-14 Identity = 29/46 (63.04%), Postives = 37/46 (80.43%), Query Frame = 1
Query: 4 PAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW 141
P I+K WS EE+ I+ KS AE+GN+W+EIAKRLPGRT+N +KN W
Sbjct: 31 PDIKKDVWSEEEDRILIKSHAEIGNKWAEIAKRLPGRTENSIKNHW 76 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32331.8710.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32331.8710.1 >prot_H-paniculata_contig32331.8710.1 ID=prot_H-paniculata_contig32331.8710.1|Name=mRNA_H-paniculata_contig32331.8710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=48bp DPAIRKGAWSPEEEAIMAKSRAELGNRWSEIAKRLPGRTDNQVKNFW*back to top mRNA from alignment at H-paniculata_contig32331:276..419+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32331.8710.1 ID=mRNA_H-paniculata_contig32331.8710.1|Name=mRNA_H-paniculata_contig32331.8710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=144bp|location=Sequence derived from alignment at H-paniculata_contig32331:276..419+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32331:276..419+ >mRNA_H-paniculata_contig32331.8710.1 ID=mRNA_H-paniculata_contig32331.8710.1|Name=mRNA_H-paniculata_contig32331.8710.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=288bp|location=Sequence derived from alignment at H-paniculata_contig32331:276..419+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |