mRNA_H-paniculata_contig32250.8690.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig32250.8690.1
Unique NamemRNA_H-paniculata_contig32250.8690.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: A0A4Y5T8S8_9PHAE (Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotaceae TaxID=2874 RepID=A0A4Y5T8S8_9PHAE)

HSP 1 Score: 458 bits (1179), Expect = 8.380e-162
Identity = 209/268 (77.99%), Postives = 241/268 (89.93%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGG 804
            MI + +V+ RHPFHLVDPSPWP+VA++GALS+TFGGVMF ++++GGG+LLSLGVLT+L+VM  WWRDIIRE  FEGHHT +VQDGLRLGMILFIVSE+MFFFAFFWAFFTSSLSPVFNIGGVWPP G++VISPWGLPLLNT+LLLSSGA++TWAHHAIVGG K EA+  L +TL FAIYFT FQ++EY+ APFS+SD +YGS FFMATGFHGFHVI+GTIFL +C +RLY  HFS QHHFGFEAAAWYWHFVDVVWL+LFL IYWWG 
Sbjct:    1 MISQVKVSHRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLSLGVLTILYVMGIWWRDIIREASFEGHHTSSVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPSGLDVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKYEAQSALYVTLTFAIYFTVFQILEYVEAPFSISDSVYGSTFFMATGFHGFHVIIGTIFLSICAVRLYVDHFSRQHHFGFEAAAWYWHFVDVVWLILFLGIYWWGA 268          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: A0A060IJV1_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=Stypocaulaceae TaxID=116061 RepID=A0A060IJV1_9PHAE)

HSP 1 Score: 456 bits (1173), Expect = 1.800e-161
Identity = 216/231 (93.51%), Postives = 224/231 (96.97%), Query Frame = 1
Query:   46 VDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAA 738
            VDPSPWPLVAAMGAL MTFGGVMFFNDFAGGGRLL LGV+T+LFVMCTWWRDIIREGLFEGHHT AVQDGLRLGM+LFIVSE+MFFFAFFWAFF SSLSPVFNIGGVWPPMG+EVISPWGLPLLNT+LLLSSGASITWAHHAIVGGFK+EAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGS+FFMATGFHGFHVIVGTIFL VCTLRLYNYHFS QHHFGFEA A
Sbjct:    1 VDPSPWPLVAAMGALGMTFGGVMFFNDFAGGGRLLVLGVITILFVMCTWWRDIIREGLFEGHHTTAVQDGLRLGMVLFIVSEVMFFFAFFWAFFASSLSPVFNIGGVWPPMGMEVISPWGLPLLNTVLLLSSGASITWAHHAIVGGFKMEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSIFFMATGFHGFHVIVGTIFLFVCTLRLYNYHFSAQHHFGFEAPA 231          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: Q2TUF2_9PHAE (Cytochrome c oxidase subunit 3 n=14 Tax=Phaeophyceae TaxID=2870 RepID=Q2TUF2_9PHAE)

HSP 1 Score: 451 bits (1160), Expect = 7.590e-159
Identity = 209/270 (77.41%), Postives = 239/270 (88.52%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGGSI 810
            M  + ++ QRHPFHLVDPSPWPLVAA+G L +TFGGV+F +++ GGG+LLSLGV+T+L+VM TWWRDIIRE  FEG HTLAVQ GLR+GMILFIVSE+MFFFAFFWAFFTSS+SPVFNIGGVWPP+GIE ISPWGLP LNTILLLSSGAS+TWAHHAIVGGFK EA  GL +TLAFA+ FT  Q  EY+HAPF+MSDG+YGSVF+MATGFHGFHVI+GTIFL +CTLRLY +HFS Q HFGFEAAAWYWHFVDVVWL LF+ IYWWG ++
Sbjct:    1 MKSKIKMIQRHPFHLVDPSPWPLVAALGGLCLTFGGVLFMHNYNGGGQLLSLGVITILYVMFTWWRDIIREAAFEGQHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSISPVFNIGGVWPPIGIEAISPWGLPFLNTILLLSSGASVTWAHHAIVGGFKKEALQGLGVTLAFAVAFTALQGFEYMHAPFAMSDGVYGSVFYMATGFHGFHVIIGTIFLAICTLRLYFHHFSRQRHFGFEAAAWYWHFVDVVWLFLFITIYWWGFNV 270          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: A0A2R4QQ89_9PHAE (Cytochrome c oxidase subunit 3 n=8 Tax=Fucales TaxID=3009 RepID=A0A2R4QQ89_9PHAE)

HSP 1 Score: 439 bits (1130), Expect = 2.820e-154
Identity = 206/270 (76.30%), Postives = 233/270 (86.30%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGGSI 810
            M  + ++ QRHPFHLVDPSPWP VAA+G LS+TFGGV++ ++++GGG+LL LGVLT+L+VM TWWRDIIRE LFEG HTLAVQ GLR+GMILFIVSE+MFFFAFFWAFFTSSL+PVFNIGGVWPP GIE ISPWGLPLLNTI+LLSSGAS+TWAHHAIV G K EA  GL +T  FA+ FT  Q  EYI APFSMSD +YGSVFFMATGFHGFHVI+GTIFL++CT RLY  HFS Q HFGFEAAAWYWHFVDVVWL LFL IYWWG ++
Sbjct:    1 MKSQSKLIQRHPFHLVDPSPWPFVAALGGLSLTFGGVLYMHNYSGGGQLLILGVLTILYVMFTWWRDIIREALFEGQHTLAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPSGIEAISPWGLPLLNTIILLSSGASVTWAHHAIVAGSKKEALYGLAVTTIFAVIFTCLQGFEYISAPFSMSDSVYGSVFFMATGFHGFHVIIGTIFLVICTFRLYLDHFSRQRHFGFEAAAWYWHFVDVVWLFLFLTIYWWGFNV 270          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: E6ZES3_ECTSI (Cytochrome c oxidase subunit 3 n=154 Tax=Phaeophyceae TaxID=2870 RepID=E6ZES3_ECTSI)

HSP 1 Score: 438 bits (1126), Expect = 1.150e-153
Identity = 206/270 (76.30%), Postives = 230/270 (85.19%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGGSI 810
            M  + ++ QRHPFHLVDPSPWPLVAA G LS+TFGGV+F +++ GGG LL LGV T+L+VM TWWRDIIRE LFEG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFFTSS+SPVFNIGGVWPP  I  ISPWGLP +NTILLLSSGAS+TWAHHAIVGGFK EA  GL +TL FAI FT  Q  EY  APFSMSDG+YGSVF+MATGFHGFHVI+GTIFL +CT+RL+  HFS QHHFGFEAAAWYWHFVDVVWL LFL IYWWG ++
Sbjct:    1 MKAKAKMVQRHPFHLVDPSPWPLVAAFGGLSLTFGGVLFMHNYVGGGELLCLGVFTILYVMFTWWRDIIREALFEGQHTYAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSISPVFNIGGVWPPTDIIAISPWGLPFVNTILLLSSGASVTWAHHAIVGGFKKEAMQGLGITLGFAIAFTAMQGFEYSAAPFSMSDGVYGSVFYMATGFHGFHVIIGTIFLSICTIRLFLGHFSRQHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGFNV 270          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: COX3_PYLLI (Cytochrome c oxidase subunit 3 n=161 Tax=Phaeophyceae TaxID=2870 RepID=COX3_PYLLI)

HSP 1 Score: 437 bits (1123), Expect = 3.280e-153
Identity = 206/270 (76.30%), Postives = 228/270 (84.44%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGGSI 810
            M    ++ QRHPFHLVDPSPWPLVAA+G LS+TFGGV+F +++ GGG LL LG  T+L+VM TWWRD+IRE LFEG HTLAVQ GLR+GMILFIVSEIMFFFAF WAFFTSS+SPVFNIGGVWPP  +  ISPWGLP LNTILLLSSGAS+TWAHHAIVGG K EA  GL +TLAFAI FT  Q  EY  APF MSDG+YGSVF+MATGFHGFHVI+GTIFL +CT+RLY  HFS QHHFGFEAAAWYWHFVDVVWL LFL IYWWG +I
Sbjct:    1 MKSTAKMIQRHPFHLVDPSPWPLVAALGGLSLTFGGVLFMHNYEGGGELLCLGFFTILYVMFTWWRDVIREALFEGQHTLAVQQGLRMGMILFIVSEIMFFFAFXWAFFTSSISPVFNIGGVWPPTDVVAISPWGLPFLNTILLLSSGASVTWAHHAIVGGLKKEAMQGLSVTLAFAIAFTAMQGFEYSGAPFGMSDGVYGSVFYMATGFHGFHVIIGTIFLFICTIRLYLSHFSCQHHFGFEAAAWYWHFVDVVWLFLFLTIYWWGFNI 270          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: A0A0U1V199_SARFS (Cytochrome c oxidase subunit 3 n=199 Tax=Sargassaceae TaxID=3014 RepID=A0A0U1V199_SARFS)

HSP 1 Score: 437 bits (1123), Expect = 3.280e-153
Identity = 202/270 (74.81%), Postives = 233/270 (86.30%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGGSI 810
            M ++ +  QRHPFHLVDPSPWP VAA+G LS TFGGV++ +++ GGG+LL LG++T+L+VM TWWRD+IRE  FEG HT AVQ GLR+GMILFIVSE+MFFFAFFWAFFTSSLSPVFNIGGVWPP GIE ISPWGLPLLNTI+LLSSGAS+TW+HHAIVGGFK EA  GL++T+ FA+ FT  Q  EY++APF+MSD +YGSVFFMATGFHGFHVI+GTIFL VCT RLY  HFS Q HFGFEAAAWYWHFVDVVWL LFL IYWWG ++
Sbjct:    1 MREQAKTVQRHPFHLVDPSPWPFVAALGGLSSTFGGVLYMHNYDGGGQLLCLGLITILYVMFTWWRDVIREASFEGQHTAAVQQGLRMGMILFIVSEVMFFFAFFWAFFTSSLSPVFNIGGVWPPAGIEAISPWGLPLLNTIILLSSGASVTWSHHAIVGGFKREALLGLVITILFAVIFTALQGFEYVNAPFAMSDSVYGSVFFMATGFHGFHVIIGTIFLCVCTFRLYLDHFSRQRHFGFEAAAWYWHFVDVVWLFLFLTIYWWGFNV 270          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: A0A2Z5T186_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=193 Tax=Dictyotaceae TaxID=2874 RepID=A0A2Z5T186_9PHAE)

HSP 1 Score: 424 bits (1089), Expect = 2.170e-148
Identity = 195/245 (79.59%), Postives = 223/245 (91.02%), Query Frame = 1
Query:   16 RVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWH 750
            +++QRHPFHLVDPSPWP+VA++GALS+TFGGVMF ++++GGG+LL LGV+TVL+VM TWWRDIIRE  FEG HT AVQDGLRLGMILFIVSE+MFFFAFFWAFFTSSL+PVFNIGGVWPP G+EVISPWGLPLLNT+LLLSSGA++TWAHHAIVGG K EA+ GL LTL FA+YFT FQ +EYI APFS+SDG+YGS FFMATGFHGFHV++GTIFL VC +RLY  HFS QHHFGFEAAAWYWH
Sbjct:    5 KLSQRHPFHLVDPSPWPIVASIGALSLTFGGVMFMHNYSGGGQLLCLGVITVLYVMVTWWRDIIREASFEGQHTSAVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKQEAQTGLYLTLTFAVYFTTFQFLEYIEAPFSISDGVYGSTFFMATGFHGFHVLIGTIFLSVCAVRLYLDHFSRQHHFGFEAAAWYWH 249          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: B2ZX66_9PHAE (Cytochrome c oxidase subunit 3 (Fragment) n=26 Tax=Dictyotaceae TaxID=2874 RepID=B2ZX66_9PHAE)

HSP 1 Score: 416 bits (1069), Expect = 2.780e-145
Identity = 192/248 (77.42%), Postives = 221/248 (89.11%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWY 744
            M  + RV+ RHPFHLVDPSPWPLVA++GALS+TFGGVMF +++ GGG+LL +GV+T+L+VM TWWRDIIRE  FEG HT AVQDGLRLGMILFIVSE+MFFFAFFWAFFTSSL+PVFNIGGVWPP G+EVISPWGLPLLNT+LLLSSGA++TWAHHAIVGG K EA+ GL LTL FAIYFT FQ +EY+ APFS+SDG+YGS FFMATGFHGFHV++GTIFL +C +RLY  HFS +HHFGFEAAAWY
Sbjct:    6 MKSQGRVSHRHPFHLVDPSPWPLVASIGALSLTFGGVMFMHNYLGGGQLLLIGVITILYVMITWWRDIIREAAFEGQHTSAVQDGLRLGMILFIVSEVMFFFAFFWAFFTSSLAPVFNIGGVWPPAGLEVISPWGLPLLNTVLLLSSGATVTWAHHAIVGGLKQEAQTGLYLTLTFAIYFTTFQFLEYVEAPFSISDGVYGSTFFMATGFHGFHVLIGTIFLSICAVRLYLDHFSREHHFGFEAAAWY 253          
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Match: A0A7U3S048_9STRA (Cytochrome c oxidase subunit 3 n=1 Tax=Schizocladia ischiensis TaxID=196139 RepID=A0A7U3S048_9STRA)

HSP 1 Score: 414 bits (1065), Expect = 2.000e-144
Identity = 192/268 (71.64%), Postives = 226/268 (84.33%), Query Frame = 1
Query:    1 MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLLSLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMFFFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGASITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIYGSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWHFVDVVWLVLFLAIYWWGG 804
            + K  +++QRHPFHLVDPSPWPLVAAMGALS+TFG VM+ +++ GGG+LL LG+LT+LFVM TWWRDIIRE  FEGHHT AVQ GLR+GMILFIVSE+MFFFA     F SSL+P F+IGGVWPP GIE+ISPWG+PLLNTILLLSSGA++TWAHHAIV G + +A   L  TL  A++FT  Q  EY+HAPF MSD +YG+ F+MATGFHGFHVI+GT+FL VCTLRL+++HFS QHHFGFEAAAWYWHFVDVVWL LF+ IYWWG 
Sbjct:    2 LSKSAKISQRHPFHLVDPSPWPLVAAMGALSLTFGAVMYMHNYRGGGQLLLLGLLTILFVMYTWWRDIIREATFEGHHTGAVQGGLRMGMILFIVSEVMFFFAXXXXXFHSSLAPAFSIGGVWPPAGIEIISPWGVPLLNTILLLSSGATVTWAHHAIVAGAREQALLALGGTLVLALFFTGLQAFEYLHAPFGMSDSVYGASFYMATGFHGFHVIIGTLFLFVCTLRLFSHHFSRQHHFGFEAAAWYWHFVDVVWLFLFITIYWWGS 269          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32250.8690.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A4Y5T8S8_9PHAE8.380e-16277.99Cytochrome c oxidase subunit 3 n=57 Tax=Dictyotace... [more]
A0A060IJV1_9PHAE1.800e-16193.51Cytochrome c oxidase subunit 3 (Fragment) n=2 Tax=... [more]
Q2TUF2_9PHAE7.590e-15977.41Cytochrome c oxidase subunit 3 n=14 Tax=Phaeophyce... [more]
A0A2R4QQ89_9PHAE2.820e-15476.30Cytochrome c oxidase subunit 3 n=8 Tax=Fucales Tax... [more]
E6ZES3_ECTSI1.150e-15376.30Cytochrome c oxidase subunit 3 n=154 Tax=Phaeophyc... [more]
COX3_PYLLI3.280e-15376.30Cytochrome c oxidase subunit 3 n=161 Tax=Phaeophyc... [more]
A0A0U1V199_SARFS3.280e-15374.81Cytochrome c oxidase subunit 3 n=199 Tax=Sargassac... [more]
A0A2Z5T186_9PHAE2.170e-14879.59Cytochrome c oxidase subunit 3 (Fragment) n=193 Ta... [more]
B2ZX66_9PHAE2.780e-14577.42Cytochrome c oxidase subunit 3 (Fragment) n=26 Tax... [more]
A0A7U3S048_9STRA2.000e-14471.64Cytochrome c oxidase subunit 3 n=1 Tax=Schizocladi... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32250contigH-paniculata_contig32250:371..1183 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeViridiplantae
Seed ortholog score367.5
Seed ortholog evalue5.5e-99
Seed eggNOG ortholog70448.Q0P3F8
KEGG koko:K02262
KEGG TC3.D.4.11,3.D.4.7,3.D.4.8
KEGG Pathwayko00190,ko01100,ko04260,ko04714,ko04932,ko05010,ko05012,ko05016,map00190,map01100,map04260,map04714,map04932,map05010,map05012,map05016
KEGG ModuleM00154
Hectar predicted targeting categorysignal anchor
EggNOG free text desc.Subunits I, II and III form the functional core of the enzyme complex
EggNOG OGs34MM4@3041,37QER@33090,COG1845@1,KOG4664@2759
COG Functional cat.C
Best tax levelChlorophyta
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko00002,ko03029
Exons1
Model size813
Cds size813
Stop1
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929996.1303048-CDS-H-paniculata_contig32250:370..11831622929996.1303048-CDS-H-paniculata_contig32250:370..1183Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig32250 371..1183 -
1691481103.2431555-CDS-H-paniculata_contig32250:370..11831691481103.2431555-CDS-H-paniculata_contig32250:370..1183Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig32250 371..1183 -


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32250.8690.1prot_H-paniculata_contig32250.8690.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig32250 371..1183 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig32250.8690.1

>prot_H-paniculata_contig32250.8690.1 ID=prot_H-paniculata_contig32250.8690.1|Name=mRNA_H-paniculata_contig32250.8690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=271bp
MIKRRRVTQRHPFHLVDPSPWPLVAAMGALSMTFGGVMFFNDFAGGGRLL
SLGVLTVLFVMCTWWRDIIREGLFEGHHTLAVQDGLRLGMILFIVSEIMF
FFAFFWAFFTSSLSPVFNIGGVWPPMGIEVISPWGLPLLNTILLLSSGAS
ITWAHHAIVGGFKIEAEDGLLLTLAFAIYFTFFQLIEYIHAPFSMSDGIY
GSVFFMATGFHGFHVIVGTIFLIVCTLRLYNYHFSTQHHFGFEAAAWYWH
FVDVVWLVLFLAIYWWGGSI*
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mRNA from alignment at H-paniculata_contig32250:371..1183-

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig32250.8690.1 ID=mRNA_H-paniculata_contig32250.8690.1|Name=mRNA_H-paniculata_contig32250.8690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=813bp|location=Sequence derived from alignment at H-paniculata_contig32250:371..1183- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTAAACGTCGTCGAGTGACCCAACGTCACCCGTTTCATTTGGTTGA TCCTAGCCCTTGGCCTTTAGTTGCAGCAATGGGGGCTTTAAGTATGACTT TTGGTGGAGTAATGTTTTTTAATGATTTTGCTGGGGGTGGAAGACTTTTA TCTTTAGGTGTATTAACTGTTTTATTTGTTATGTGTACTTGGTGGCGGGA TATTATTCGTGAAGGATTATTCGAAGGGCATCATACTTTAGCTGTTCAAG ATGGTTTACGTTTGGGTATGATTTTATTTATTGTTTCTGAAATTATGTTT TTTTTTGCTTTTTTTTGGGCTTTTTTTACTTCATCTCTTTCACCTGTATT CAATATTGGAGGTGTTTGGCCACCAATGGGTATCGAAGTTATCAGCCCTT GGGGATTGCCTTTGTTGAATACTATTCTTTTGCTTTCTTCTGGTGCTTCT ATTACTTGGGCGCACCATGCAATTGTAGGGGGTTTTAAGATAGAAGCAGA AGATGGTTTACTACTAACTTTAGCTTTTGCTATTTATTTTACTTTTTTTC AATTAATTGAGTATATACATGCCCCATTTTCAATGTCTGATGGTATTTAT GGCTCTGTATTTTTTATGGCTACAGGGTTTCATGGATTTCATGTTATTGT TGGTACTATTTTTTTAATTGTATGTACATTAAGGTTATATAATTATCATT TTAGTACCCAGCATCATTTTGGTTTTGAGGCTGCTGCTTGGTATTGGCAT TTTGTTGATGTAGTTTGGTTAGTATTATTTCTTGCTATTTATTGGTGGGG TGGTTCGATTTAA
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Coding sequence (CDS) from alignment at H-paniculata_contig32250:371..1183-

>mRNA_H-paniculata_contig32250.8690.1 ID=mRNA_H-paniculata_contig32250.8690.1|Name=mRNA_H-paniculata_contig32250.8690.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1626bp|location=Sequence derived from alignment at H-paniculata_contig32250:371..1183- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGATTAAACGTCGTCGAGTGACCCAACGTCACCCGTTTCATTTGGTTGA
TCCTAGCCCTTGGCCTTTAGTTGCAGCAATGGGGGCTTTAAGTATGACTT
TTGGTGGAGTAATGTTTTTTAATGATTTTGCTGGGGGTGGAAGACTTTTA
TCTTTAGGTGTATTAACTGTTTTATTTGTTATGTGTACTTGGTGGCGGGA
TATTATTCGTGAAGGATTATTCGAAGGGCATCATACTTTAGCTGTTCAAG
ATGGTTTACGTTTGGGTATGATTTTATTTATTGTTTCTGAAATTATGTTT
TTTTTTGCTTTTTTTTGGGCTTTTTTTACTTCATCTCTTTCACCTGTATT
CAATATTGGAGGTGTTTGGCCACCAATGGGTATCGAAGTTATCAGCCCTT
GGGGATTGCCTTTGTTGAATACTATTCTTTTGCTTTCTTCTGGTGCTTCT
ATTACTTGGGCGCACCATGCAATTGTAGGGGGTTTTAAGATAGAAGCAGA
AGATGGTTTACTACTAACTTTAGCTTTTGCTATTTATTTTACTTTTTTTC
AATTAATTGAGTATATACATGCCCCATTTTCAATGTCTGATGGTATTTAT
GGCTCTGTATTTTTTATGGCTACAGGGTTTCATGGATTTCATGTTATTGT
TGGTACTATTTTTTTAATTGTATGTACATTAAGGTTATATAATTATCATT
TTAGTACCCAGCATCATTTTGGTTTTGAGGCTGCTGCTTGGTATTGGCAT
TTTGTTGATGTAGTTTGGTTAGTATTATTTCTTGCTATTTATTGGTGGGG
TGGTTCGATTTAAATGATTAAACGTCGTCGAGTGACCCAACGTCACCCGT
TTCATTTGGTTGATCCTAGCCCTTGGCCTTTAGTTGCAGCAATGGGGGCT
TTAAGTATGACTTTTGGTGGAGTAATGTTTTTTAATGATTTTGCTGGGGG
TGGAAGACTTTTATCTTTAGGTGTATTAACTGTTTTATTTGTTATGTGTA
CTTGGTGGCGGGATATTATTCGTGAAGGATTATTCGAAGGGCATCATACT
TTAGCTGTTCAAGATGGTTTACGTTTGGGTATGATTTTATTTATTGTTTC
TGAAATTATGTTTTTTTTTGCTTTTTTTTGGGCTTTTTTTACTTCATCTC
TTTCACCTGTATTCAATATTGGAGGTGTTTGGCCACCAATGGGTATCGAA
GTTATCAGCCCTTGGGGATTGCCTTTGTTGAATACTATTCTTTTGCTTTC
TTCTGGTGCTTCTATTACTTGGGCGCACCATGCAATTGTAGGGGGTTTTA
AGATAGAAGCAGAAGATGGTTTACTACTAACTTTAGCTTTTGCTATTTAT
TTTACTTTTTTTCAATTAATTGAGTATATACATGCCCCATTTTCAATGTC
TGATGGTATTTATGGCTCTGTATTTTTTATGGCTACAGGGTTTCATGGAT
TTCATGTTATTGTTGGTACTATTTTTTTAATTGTATGTACATTAAGGTTA
TATAATTATCATTTTAGTACCCAGCATCATTTTGGTTTTGAGGCTGCTGC
TTGGTATTGGCATTTTGTTGATGTAGTTTGGTTAGTATTATTTCTTGCTA
TTTATTGGTGGGGTGGTTCGATTTAA
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