mRNA_H-paniculata_contig3225.8688.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: A0A6H5K6V8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K6V8_9PHAE) HSP 1 Score: 113 bits (282), Expect = 1.420e-22 Identity = 106/354 (29.94%), Postives = 157/354 (44.35%), Query Frame = 2
Query: 215 MILFAAGVLALGARVSTAYPSKLVNMLRDPDAVDGDGGCLDGE----QYNQIETISTLKDNYDYYTLTWRQVTGACGIPISSSDAAVFSVSFELGEVAYDTQGRDQILMFMCSPYGYYEVEI--KIVGGVEGASGDIAWEVEIGPSEEHIWDTWNPEEYNIP-KYNP--SGPG---TYTFPLEGETDSHMALMWAGPDPAGDSCGDGVGGGAPVYTGXXXXXXXXXXXXXXXXAVDSESL-------GCWEDG--ADRIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCS-------ADDSFTSKAAI---------DDSKCNTPCTGDSSVICGGKDAMNVYEV 1165
M L AA A A V K + LR D + D C+D E +Y QIE ++ + +TWRQ+T CG ++ FS + + + R Q+ M++C+P+G YE+E+ K G A IAWEVE GP E HIWDT N ++ Y P SG G T+TFPLEG ++ + ++M++GP P + C + G Y G A D++ G +DG AD++MTL C C +G Y+G+E +C C DD + ++ D + C+GDS V+CG D ++VY +
Sbjct: 1 MTLLAAVSGAFLASVPGVEGVKAIFDLRTGDDYESDNNCVDSEARKVRYLQIEGFDY--NSSPWMQMTWRQLTDECGNAVTDG----FSETVTYDGDSIEDGDRLQMDMYICAPWGNYELELVSKSTNG-GNAMEKIAWEVEYGPDEYHIWDTLNTPFFDDSLDYAPIPSGSGEEETFTFPLEG-SEGYYSVMYSGPFPPLE-CSNLHPSGI-TYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEK-----------CAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSL 333
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: A0A6H5K566_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K566_9PHAE) HSP 1 Score: 113 bits (283), Expect = 5.940e-22 Identity = 106/354 (29.94%), Postives = 156/354 (44.07%), Query Frame = 2
Query: 215 MILFAAGVLALGARVSTAYPSKLVNMLRDPDAVDGDGGCLDGE----QYNQIETISTLKDNYDYYTLTWRQVTGACGIPISSSDAAVFSVSFELGEVAYDTQGRDQILMFMCSPYGYYEVEI--KIVGGVEGASGDIAWEVEIGPSEEHIWDTWNPEEYNIP-KYNP--SGPG---TYTFPLEGETDSHMALMWAGPDPAGDSCGDGVGGGAPVYTGXXXXXXXXXXXXXXXXAVDSESL-------GCWEDG--ADRIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCS-------ADDSFTSKAAI---------DDSKCNTPCTGDSSVICGGKDAMNVYEV 1165
M L AA A A V K + LR D + D C D E +Y QIE ++ + +TWRQ+T CG ++ FS + + + R Q+ M++C+P+G YE+E+ K G A IAWEVE GP E HIWDT N ++ Y P SG G T+TFPLEG ++ + ++M++GP P + C + G Y G A D++ G +DG AD++MTL C C +G Y+G+E +C C DD + ++ D + C+GDS V+CG D ++VY +
Sbjct: 1 MTLVAAASGAFLASVPAVDGVKAIFDLRTGDDYESDNNCADSEARKVRYLQIEGFDY--NSSPWMQMTWRQLTDECGNAVTDG----FSETVTYDGDSIEDGDRLQMDMYICAPWGNYELELVSKSTNG-GNAMEKIAWEVEYGPDEYHIWDTLNTPFFDDSLDYAPIPSGSGEEETFTFPLEG-SEGYYSVMYSGPFPPLE-CSNLHPSGI-TYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEK-----------CAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSL 333
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: D7FMV1_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMV1_ECTSI) HSP 1 Score: 97.8 bits (242), Expect = 5.350e-17 Identity = 105/359 (29.25%), Postives = 158/359 (44.01%), Query Frame = 2
Query: 215 MILFAAGVLALGARV-STAYPSKLVNMLRDPDAVDGDGGCLDGE----QYNQIETISTLKDNYDYYTLTWRQVTGACGIPISSSDAAVFSVSFELGEVAYDTQGRDQILMFMCSPYGYYEVEIKIVGGVEGASGD-IAWEVEIGPSEEHIWDTWN---------PEEYN-IP-KYNPS--GPGTYTFPLEGETDSHMALMWAGPDPAGDSCGDGVGGGAPVYTGXXXXXXXXXXXXXXXXAVDSESL-------GCWEDG--ADRIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCSAD-DSFTSKAAIDDSKC--------NTP-----CTGDSSVICGGKDAMNVYEV 1165
M L +AG AL A + + A K + LR + + D C D E +Y QIE K + +TWRQ+T CG IS D ++ G+ DT + QI M++C+P+G+YE+E+ G + IA+EVE GP + HIWD+ N P +Y IP KYN T+T+PLEG + + ++M++GP P + + Y G A D + G ++G AD++MTL C C +G Y+G+E +C C + D +S C N P C+G+S+V+CG M+VY +
Sbjct: 7 MKLVSAGCTALLASMPAPAAAEKHIFDLRTGNDYESDANCEDSETKKTRYLQIEIFDYNKT--PWLEITWRQLTDECGNAIS--DGFEGKAHYKDGD-RQDTS-KFQIDMYVCAPWGHYELEVVSKSTNGGNPMERIAFEVEYGPEQYHIWDSLNTPFFDEDDPPSDYAPIPTKYNDGIEEGDTFTWPLEG-AEGYYSVMYSGPFPPLEC--PNLFPEDVAYVGCYPAGMFGEAEGPEGSANDEDPAENYRLFDGIDDEGVAADKVMTLEK-----------CAAICTEQGTAYFGLESAVKCLCGDELDGSPYDDVRGESVCGVDYTDDVNIPEYKFLCSGESTVLCGTDTHMSVYSL 345
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: A0A6H5K384_9PHAE (WSC domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K384_9PHAE) HSP 1 Score: 93.6 bits (231), Expect = 5.770e-16 Identity = 86/288 (29.86%), Postives = 129/288 (44.79%), Query Frame = 2
Query: 401 LTWRQVTGACGIPISSSDAAVFSVSFELGEVAYDTQGRDQILMFMCSPYGYYEVEI--KIVGGVEGASGDIAWEVEIGPSEEHIWDTWNPEEYNIP-KYNP--SGPG---TYTFPLEGETDSHMALMWAGPDPAGDSCGDGVGGGAPVYTGXXXXXXXXXXXXXXXXAVDSESL-------GCWEDG--ADRIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCS-------ADDSFTSKAAI---------DDSKCNTPCTGDSSVICGGKDAMNVYEV 1165
L RQ+T CG ++ FS + + + R Q+ M++C+P+G YE+E+ K G A IAWEVE GP E HIWDT N ++ Y P SG G T+TFPLEG ++ + ++M++GP P + C + G Y G A D++ G +DG AD++MTL C C +G Y+G+E +C C DD + ++ D + C+GDS V+CG D ++VY +
Sbjct: 5 LKHRQLTDECGNAVTDG----FSETVTYDGDSIEDGDRLQMDMYICAPWGNYELELVSKSTNG-GNAMEKIAWEVEYGPDEYHIWDTLNTPFFDDSLDYAPIPSGSGEEETFTFPLEG-SEGYYSVMYSGPFPPLE-CSNLHPSGI-TYEGCYSAGIFGTADGPTGSANDADPAENYRMFDGIDDDGVNADKVMTLEK-----------CAATCTAQGTQYFGLESAVKCLCGDELVGSPTDDVYGDGGSVCGIDITFGGDVPEYKYLCSGDSRVLCGTDDHISVYSL 273
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: UPI00200848F7 (WSC domain-containing protein n=1 Tax=Xylaria bambusicola TaxID=326684 RepID=UPI00200848F7) HSP 1 Score: 84.3 bits (207), Expect = 1.140e-12 Identity = 47/112 (41.96%), Postives = 60/112 (53.57%), Query Frame = 2
Query: 893 SLGCWEDGAD-RIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCSADDSFTSKAAIDDSKCNTPCTGDSSVICGGKDAMNVYEV*SRQGRAT*TIATP*SRRTG 1225
S GCW+DG + RIM A + ++P C C G G G E+ KQCFCS + DDSKCNTPC+GDSSV CGG + +Y +G T T P +R+G
Sbjct: 153 SQGCWQDGPNGRIMPTYQAQDSDTLTPQSCAALCNGMGYTISGTEYFKQCFCSNAIYNGGVKSTDDSKCNTPCSGDSSVNCGGPGYLTIYS----KGTPT-TFQPPVPQRSG 259
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: A0A553HQC6_9PEZI (Uncharacterized protein n=1 Tax=Xylaria flabelliformis TaxID=2512241 RepID=A0A553HQC6_9PEZI) HSP 1 Score: 79.0 bits (193), Expect = 5.190e-11 Identity = 40/105 (38.10%), Postives = 56/105 (53.33%), Query Frame = 2
Query: 893 SLGCWEDGAD-RIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCSADDSFTSKAAIDDSKCNTPCTGDSSVICGGKDAMNVYEV*SRQGRAT*TIAT 1204
S GCW+DG + RIM A + ++P C + CAG G E+ +QCFCS DD+KCNTPC+G+S+V CGG + +Y + Q T+ T
Sbjct: 157 SQGCWQDGPNGRIMPTYQAQDNDQLTPQSCANLCAGMNYTISGTEYYRQCFCSNAIYNGGVKGTDDTKCNTPCSGNSTVNCGGPGYLTIYSKGTPQTFQPPTVQT 261
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: D8TXT7_VOLCA (Uncharacterized protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TXT7_VOLCA) HSP 1 Score: 73.9 bits (180), Expect = 5.430e-11 Identity = 33/90 (36.67%), Postives = 53/90 (58.89%), Query Frame = 2
Query: 896 LGCWEDGADRIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCSADDSFTSKAAIDDSKCNTPCTGDSSVICGGKDAMNVYEV 1165
+GC+ D AD ++ A N+ NMS ++C + G Y+GVE+G++C+ +D ++ S C C+GD+S ICGG A+N+YE
Sbjct: 103 IGCFADDADHVLPERLADNDPNMSVSYCRNLAKAAGLPYFGVEYGQECYGGSDMERATRLGRS-SNCTHSCSGDTSQICGGDWAVNIYET 191
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: A0A8H4R3Y4_9HELO (WSC domain-containing protein n=1 Tax=Cudoniella acicularis TaxID=354080 RepID=A0A8H4R3Y4_9HELO) HSP 1 Score: 77.8 bits (190), Expect = 8.640e-11 Identity = 42/94 (44.68%), Postives = 58/94 (61.70%), Query Frame = 2
Query: 893 SLGCWEDGAD-RIMTLASASNEAN--MSPAFCLDFCAGEGAVYYGVEFGKQCFCSADDSFTSKAAIDDSKCNTPCTGDSSVICGGKDAMNVYEV 1165
SLGC++D A+ R+MT +N N ++ C+ +CA G G EFG QCFC+ T+K +DDSKCN PC GDS+ ICGG ++VY +
Sbjct: 502 SLGCYQDVANNRVMTGIELANIGNHQVTNTKCVAYCAKAGYSMAGTEFGGQCFCANSLRVTTK--LDDSKCNMPCEGDSTQICGGGATLSVYSM 593
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: E9F637_METRA (Carbohydrate-binding WSC n=8 Tax=Metarhizium TaxID=5529 RepID=E9F637_METRA) HSP 1 Score: 78.6 bits (192), Expect = 8.990e-11 Identity = 40/98 (40.82%), Postives = 59/98 (60.20%), Query Frame = 2
Query: 884 DSESLGCWEDGADRIMTLASASN--EANMSPAFCLDFCAGEGAVYYGVEFGKQCFCSADDSFTSKA--AIDDSKCNTPCTGDSSVICGGKDAMNVYEV 1165
D +++GC+ D ++ TL+ N A+++P+ C+ C G Y G EFG +C+C SF + A A+D S+CN PC GDSSV CGG+ + VYE
Sbjct: 138 DYKAIGCYTDDTNKGRTLSWPVNVDSASITPSSCIAACKANGFAYAGTEFGGECWCG---SFLNPATQAVDASQCNIPCHGDSSVSCGGRGRLTVYEA 232
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Match: D8LF45_ECTSI (Beta-xylosidase, putative n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LF45_ECTSI) HSP 1 Score: 70.5 bits (171), Expect = 9.380e-11 Identity = 39/89 (43.82%), Postives = 52/89 (58.43%), Query Frame = 2
Query: 896 LGCWEDGADRIMTLASASNEANMSPAFCLDFCAGEGAVYYGVEFGKQCFCSA-DDSFTSKAAIDDSKCNTPCTGDSSVICGGKDAMNVY 1159
LGC+ D DR+ + ++ A+ SP C C EG +YG+++GKQCFC A D+ FT + +C CTGD ICGG AMNVY
Sbjct: 4 LGCYTDRNDRVFS-GPMTSSADNSPETCKAAC--EGYAFYGLQYGKQCFCGASDEDFTRHG--ESQECLLRCTGDRKSICGGVWAMNVY 87 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3225.8688.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3225.8688.1 >prot_H-paniculata_contig3225.8688.1 ID=prot_H-paniculata_contig3225.8688.1|Name=mRNA_H-paniculata_contig3225.8688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=326bp MAPLRTNNMILFAAGVLALGARVSTAYPSKLVNMLRDPDAVDGDGGCLDGback to top mRNA from alignment at H-paniculata_contig3225:5645..14540+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3225.8688.1 ID=mRNA_H-paniculata_contig3225.8688.1|Name=mRNA_H-paniculata_contig3225.8688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=8896bp|location=Sequence derived from alignment at H-paniculata_contig3225:5645..14540+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3225:5645..14540+ >mRNA_H-paniculata_contig3225.8688.1 ID=mRNA_H-paniculata_contig3225.8688.1|Name=mRNA_H-paniculata_contig3225.8688.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1956bp|location=Sequence derived from alignment at H-paniculata_contig3225:5645..14540+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |