mRNA_H-paniculata_contig3213.8652.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: A0A6H5JIM0_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JIM0_9PHAE) HSP 1 Score: 213 bits (542), Expect = 3.540e-64 Identity = 106/210 (50.48%), Postives = 137/210 (65.24%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRPDPSRDFDGKIGVWRVCVIKQAQRNSAR-------------------RERG----QQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLL 561
+H+ E+WFYL+ E+++VR+F GE +V H+SH+PK+M I A +RPDP+ DFDGKIG+WR+CVI+ AQR+S + R R ++YEFD TIDAEWY++WY D LP +K+ M WL+ + VV QQDGA+ HTGK P LN GW V LVTQPAQSPDLN+N LG FASLK RVW +ID L+
Sbjct: 155 VHLDESWFYLMREKEKVRVFSGEDVPGPPRVPHESHLPKIMVIVANARPDPAHDFDGKIGIWRICVIETAQRSSKKSTSSTAPSTRSGWREPPHGRNRPAIVQEEYEFDCTIDAEWYKDWYIDVLLPAIKEKMPWLRSKRVVVQQDGASPHTGKGNPEILNSAGIARGWLVELVTQPAQSPDLNINDLGCFASLKPRVWGVNAFSIDELV 364
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: A0A485KDC6_9STRA (Aste57867_3131 protein n=1 Tax=Aphanomyces stellatus TaxID=120398 RepID=A0A485KDC6_9STRA) HSP 1 Score: 135 bits (340), Expect = 1.480e-33 Identity = 87/250 (34.80%), Postives = 127/250 (50.80%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRP----DPSRDFDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEVQQHTETKKRQRAGSLSKTV 738
+HI E WFYL R ++ E V K K HI KVMF+ AV+RP R +DGKIG+W + AQR S RERG VT+ + Y+E+ + +P +K + + QQD A H D D GW++ LV QPA SPD N+ LGFF S+++ RE+ ID L+ V +D D + L++ + +L + + LK GDN F++ H++ K R G +++ V
Sbjct: 170 VHIDEKWFYLTLVNRRYYLWHDED-VPVRKCSSKRHIIKVMFLTAVARPRYDYTQRRMWDGKIGMWPFVSVVPAQRKSKNRERGTPVTTPVTVTKKVYREYLLEHVIPTIKKVWPGRRSHPIYIQQDNARPHVEVDDAAVTLAGHSD-GWSIQLVAQPAMSPDFNVLDLGFFNSIQALQHREVVTGIDDLVAAVHRAFDDLDWSVLDKTFMTLQRVMGEALKMGGDNAFKLP-HSKKDKTARLGPVARVV 416
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: A0A6A5AA16_9STRA (Uncharacterized protein n=2 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A6A5AA16_9STRA) HSP 1 Score: 132 bits (331), Expect = 3.380e-32 Identity = 74/231 (32.03%), Postives = 122/231 (52.81%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRPDPS----RDFDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEV 681
+HI E WFY+ R ++ E + K Q K HI KVMF+CAV+RP + +DGK+G+W + A+R S R+RG +T+ Y+ + D +P ++ +G + QQD A H D P L ++ GWN+ L+ QPAQSPD N+ LGFF +++S + TID L++ V+ ++ L++ + +L K + +++ GDN +++
Sbjct: 170 VHIDEKWFYITQVNRRFYLWHDEPTPQR-KAQSKRHITKVMFLCAVARPRHDSAHRKMWDGKVGLWPFVETQLAKRRSKNRDRGTPVTVPMTVTKPVYRRFLVDKVIPAIQAQWPGRRGATIYVQQDNAKPHVAVDDPEVLAAGRKE-GWNIQLMAQPAQSPDFNVLDLGFFNAIQSLQHQTTARTIDDLIKCVEDAFENLAWRVLDKTFMTLQKVMEEAMRSSGDNVYKL 398
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: A0A397C8F5_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces astaci TaxID=112090 RepID=A0A397C8F5_9STRA) HSP 1 Score: 127 bits (320), Expect = 1.670e-31 Identity = 83/250 (33.20%), Postives = 127/250 (50.80%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRP--DPSRD--FDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEVQQHTETKKRQRAGSLSKTV 738
IHI E WFYL R ++ E + K K HI KVMF+ AV+RP D R +DGK+G+W ++ AQR S R+RG VT+ + Y+E+ +P +K + + + QQD A H D P + R GW + LV QPA SPD N+ LGFF S+++ R++ ID L+ V ++ D L++ + +L + + +K GDN++++ H K R G + +V
Sbjct: 35 IHIDEKWFYLTLVNRRYYLWYDEA-IPVRKCSSKRHIVKVMFLTAVARPRFDYVRKTMWDGKLGMWPFVAVQPAQRTSKNRDRGTLVTTPVTVTKKVYREYLLQHVIPRIKAVWPGHRDQPIYIQQDNARPHVEVDDPAVV-AAGRSDGWAIQLVAQPAMSPDFNVLDLGFFNSIQALQHRQVVTGIDDLVAAVHGAFNELDWRILDKTFVTLVRVMEESMKMGGDNSYKLP-HQSKDKMARLGPTAPSV 281
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: W4GGI5_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4GGI5_9STRA) HSP 1 Score: 128 bits (322), Expect = 2.240e-31 Identity = 76/231 (32.90%), Postives = 118/231 (51.08%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRP--DPSRD--FDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEV 681
+H++E WFY+ R ++ E + KVQ K HI KVMF+CAV+RP D R +DGKIG+W + K A R S R+RG +T+ Y+ D +P ++ +G + QQ+ A H D + R GWN+ LV QPA SP+ N+ LGFF +++S + TID L+ V+ Y + + ++ + +L K + K GDN +++
Sbjct: 103 VHLNEKWFYITQINHRDYLWHDEP-IPQRKVQSKRHITKVMFLCAVARPRFDFGRRVMWDGKIGLWPIVETKVAARRSKNRDRGTPVTVPMTVTKPIYRRLLVDKVIPAIQAKWPGQRGGTIYLQQNNARPHVAVDDAEVV-AASRKNGWNIQLVAQPAMSPNFNVLDLGFFNAIQSLQHQTAMRTIDDLIASVQDAYSSLASQVWDKTFMTLQKVMEEAFKLEGDNIYKL 331
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: W2PEH8_PHYPN (Uncharacterized protein n=1 Tax=Phytophthora parasitica (strain INRA-310) TaxID=761204 RepID=W2PEH8_PHYPN) HSP 1 Score: 121 bits (303), Expect = 2.000e-29 Identity = 76/227 (33.48%), Postives = 121/227 (53.30%), Query Frame = 1
Query: 13 EAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRP--DPSRD--FDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEV 681
E WFYL E R + E+ T V++K++I KVMF+ AV+RP D R +DGKIG+W V + A+R+S R G +D + Y+ +P +K + W G+ V Q D A H D P + DGGW++++ QPA SPD N+N LGFFAS++S ++ TI+ L+ V+ Y+ + +T+++V+ +L + G N +++
Sbjct: 22 EKWFYLKKENQRFYLGTHEEPPHLT-VKNKNYIVKVMFLVAVARPRWDSKRHRIWDGKIGLWPFVVYEPAERSSKNRPAGTLELKTYNVDKDVYRHALCRMVIPSVK--VVWPSGKRVFLQHDNAKPHVAADDPEVVAACS-DGGWDMSIKPQPANSPDFNVNDLGFFASIQSLQHKKKARTIEDLVNNVEEAYNQLEYSTIDKVFVTLQSVLQASMNVDGCNKYQL 244
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: A0A6G0X8U9_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0X8U9_9STRA) HSP 1 Score: 124 bits (312), Expect = 2.470e-29 Identity = 77/232 (33.19%), Postives = 123/232 (53.02%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRPD----PSRDFDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEVQ 684
IH+ E WF+L ++ + GE+ + S +HKSHIPK+MF+ AV RP S+ FDGK+G++ + A+R+S + +G T+ + Y + + LP + + + + QQDGA H P +L G N+ LVTQPA SPDLN+ LGFFA++++ +R+ TID L+ V + + L+ VW SL +R ++ GDN +++
Sbjct: 153 IHLDEKWFFLDKDKRTFYLVKGEE-LPSRTARHKSHIPKLMFLTAVGRPQYDHGTSQYFDGKLGIFPFVIHGTAKRSSRHQAKGAPVLIPQTVTRDIYVDALVNHVLPAILTKFP-SRWKTLYIQQDGARPHCTDGCP-ELVASAASFGLNIKLVTQPANSPDLNILDLGFFAAIQTLQYRKCPKTIDEFLDAVHESFHELKSDCLDSVWLSLHRRMATIIDHYGDNTMKLE 381
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: UPI000B8AB67D (uncharacterized protein LOC110800636 n=1 Tax=Spinacia oleracea TaxID=3562 RepID=UPI000B8AB67D) HSP 1 Score: 124 bits (312), Expect = 4.140e-29 Identity = 77/254 (30.31%), Postives = 132/254 (51.97%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQR-VRSTKVQHKSHIPKVMFICAVSRPDPSRD----FDGKIGVWRVCVIKQAQRNSARRERGQ-QYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEVQQHTETKKRQRAGSLSKTVKI 744
IHI E WFY+ + R + GE+ R+T Q+ +++ KVMF+C ++RP + FDGK+G++ A+R+S RERG + + ++ E + D LP ++ W ++++ QQD + H + L+ ++ G+N+ L+ QP QSPDLN+ LGFF +++S ++ ++ L++ VK Y+AYD + W L ++L G NN++ H K G L TV++
Sbjct: 272 IHIDEKWFYMSRKTQRYYLLAGEEEPYRAT--QNSNYLVKVMFLCGIARPIIGYNGEVLFDGKLGIFPFTEEVPAKRSSKNRERGTIEIKAITSVTKEVIRRKIIDELLPAIRSKWPWFASKDILIQQDNSRPHINPNDAEFLDAATQE-GFNIQLICQPPQSPDLNVLDLGFFRAIQSLQHQKFPRDVEALVKAVKEAYEAYDPKLINYTWLQLQYVMLEILGVKGGNNYKSP-HKGKAKMDNLGLLPDTVEV 521
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: A0A024U7I1_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024U7I1_9STRA) HSP 1 Score: 119 bits (299), Expect = 4.450e-29 Identity = 79/248 (31.85%), Postives = 122/248 (49.19%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRPDPSRDFDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVTIDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEVQQHTETKKRQRAGSLSKTVKI 744
+H+ E WF + + + GE+ V+ + K IP VMF+CAV+RP FDGKIG+W A+R+S R V +DA Y+++ + +PE+K + + VV Q D A H D L GW + QP SPDLN+ GLGFFAS++S ++ + T+D ++ +D LE V+ L VL GDN+F++ H + +RAG+L+ + +
Sbjct: 5 VHLDEKWFNADKDCHKEYLVEGEE-VQPRACKSKRFIPNVMFLCAVARPQKDVGFDGKIGLWPFVSQSPARRSSHNRPASSMVTTLVYVDATTYRDYALNKVVPEIKASFP-SASKRVVLQHDNATPHRSVDDDALAGVLTD--GWTFVVRRQPPNSPDLNVLGLGFFASIQSLQYKRVSRTVDDVIASTLMAFDMLSGEKLEDVFLILQAVMRLVLDHGGDNHFKLP-HLKKDAMRRAGTLAVNLAV 247
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Match: UPI0020091A08 (uncharacterized protein LOC125206097 n=1 Tax=Salvia hispanica TaxID=49212 RepID=UPI0020091A08) HSP 1 Score: 123 bits (308), Expect = 5.600e-29 Identity = 82/255 (32.16%), Postives = 127/255 (49.80%), Query Frame = 1
Query: 1 IHIHEAWFYLICERDRVRMFPGEQR-VRSTKVQHKSHIPKVMFICAVSRPDPSRD----FDGKIGVWRVCVIKQAQRNSARRERGQQYEFDVT-IDAEWYQEWYKDSFLPELKDNMSWLKGEEVVAQQDGAALHTGKDTPRKLNELERDGGWNVNLVTQPAQSPDLNMNGLGFFASLKSRVWRELYGTIDGLLEEVKSMYDAYDAATLERVWQSLFKRYNQVLKTLGDNNFEVQQHTETKKRQRAGSLSKTVKID 747
+HI E WFY+ DR + P E RS K K +I KVMF+CAVSRP + +DGK+G++ AQR S R+RG +T ++ E + +P +K +E+ QQD A H P + + G+ ++L+ QP SPD N+ LGFF +++S ++ +D L+E V Y+ TL RV+ SL Q+L+ GDN+++V H + +R G L +++D
Sbjct: 170 VHIDEKWFYMTKTSDRYYLLPDEDEPYRSCK--SKRYITKVMFMCAVSRPQFDSEGQPTYDGKVGIFPFTEAVPAQRKSKNRDRGTLETKPITTLNKEVMRGCIIHKIIPAIKAKWPDWASKEIYIQQDNATPHITATDP-EFQAIANSDGFKIHLICQPPNSPDTNILDLGFFRAIQSLQHQKPCRNVDELVENVCKAYEELTPQTLNRVFLSLQACLTQILQFRGDNSYKVP-HMNKDRLERTGGLPNVLEVD 420 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3213.8652.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3213.8652.1 >prot_H-paniculata_contig3213.8652.1 ID=prot_H-paniculata_contig3213.8652.1|Name=mRNA_H-paniculata_contig3213.8652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=249bp IHIHEAWFYLICERDRVRMFPGEQRVRSTKVQHKSHIPKVMFICAVSRPDback to top mRNA from alignment at H-paniculata_contig3213:7976..8722+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3213.8652.1 ID=mRNA_H-paniculata_contig3213.8652.1|Name=mRNA_H-paniculata_contig3213.8652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=747bp|location=Sequence derived from alignment at H-paniculata_contig3213:7976..8722+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3213:7976..8722+ >mRNA_H-paniculata_contig3213.8652.1 ID=mRNA_H-paniculata_contig3213.8652.1|Name=mRNA_H-paniculata_contig3213.8652.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1494bp|location=Sequence derived from alignment at H-paniculata_contig3213:7976..8722+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |