mRNA_H-paniculata_contig32122.8649.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A6H5JE49_9PHAE (RING-type domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5JE49_9PHAE) HSP 1 Score: 146 bits (369), Expect = 1.440e-36 Identity = 67/156 (42.95%), Postives = 97/156 (62.18%), Query Frame = 1
Query: 346 MNKAKGRIAMQCPICNERRT--KGVECSEGHFVCKTCCVQYVSLTL--EGTIFWDTIECVNYPCKSYYRGVEIREVMPQSAIQRIEKRQMDAAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTMCRKDFWWTCNCEYSGQHKTGC 801
+ + GR A+ C +C E + C EGH +CK C YV TL +GT+FWD I+C + G + ++P I++IE +QMD A+LVAGERDP+S I KHS+ CP CG+PIQ++ GC H+ C +CR +FW+ C+C+Y +H+ GC
Sbjct: 101 IRRKAGRAAVTCIVCFEDTAVDRCSRCPEGHAMCKNCVTSYVVETLVPQGTVFWDRIKCGGSSTCGHLFGPSVTSLLPIPIIKKIETKQMDVAHLVAGERDPTSDKWISKHSRDCPNCGVPIQRSSGCMHMTCIICRHNFWYDCDCKYP-RHRQGC 255
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A074XDQ5_9PEZI (RING-type domain-containing protein (Fragment) n=1 Tax=Aureobasidium namibiae CBS 147.97 TaxID=1043004 RepID=A0A074XDQ5_9PEZI) HSP 1 Score: 76.3 bits (186), Expect = 4.230e-12 Identity = 32/64 (50.00%), Postives = 41/64 (64.06%), Query Frame = 1
Query: 607 AAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTMCRKDFWWTCNCEYSGQHKTG 798
AA + E D SQ IDK SKPCP+C +PIQKN GCDH+ C+ C DF W C+ +Y+ + G
Sbjct: 141 AALHRSTEHDEKSQKEIDKISKPCPQCRVPIQKNSGCDHMTCSRCNHDFCWACSADYNDIARQG 204
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A074VYK1_9PEZI (RING-type domain-containing protein (Fragment) n=1 Tax=Aureobasidium melanogenum CBS 110374 TaxID=1043003 RepID=A0A074VYK1_9PEZI) HSP 1 Score: 70.5 bits (171), Expect = 4.020e-10 Identity = 27/57 (47.37%), Postives = 36/57 (63.16%), Query Frame = 1
Query: 628 ERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTMCRKDFWWTCNCEYSGQHKTG 798
E D S+ ++K SKPCP C +PIQKN GCDH+ C+ CR F W C Y+ ++ G
Sbjct: 148 ENDEKSEKEVEKISKPCPECRVPIQKNNGCDHMTCSRCRHQFCWICLASYTHIYRDG 204
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: S7PIK8_MYOBR (RBR-type E3 ubiquitin transferase n=1 Tax=Myotis brandtii TaxID=109478 RepID=S7PIK8_MYOBR) HSP 1 Score: 68.6 bits (166), Expect = 5.180e-10 Identity = 31/75 (41.33%), Postives = 48/75 (64.00%), Query Frame = 1
Query: 568 QSAIQRI--EKRQMDAAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTM--CRKDFWWTCNCEYS 780
Q+A+ R+ + Q+DA + SS+ I K +KPCPRC +P++KNGGC H+KC C+ ++ W C+CE+S
Sbjct: 70 QTALTRLLPQAYQVDARAAEQARWEESSRETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCQLEWCWNCSCEWS 144
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: UPI000B4F1927 (E3 ubiquitin-protein ligase parkin n=1 Tax=Meriones unguiculatus TaxID=10047 RepID=UPI000B4F1927) HSP 1 Score: 66.6 bits (161), Expect = 7.270e-10 Identity = 32/92 (34.78%), Postives = 50/92 (54.35%), Query Frame = 1
Query: 523 CKSYYRGVEIREVMPQSAIQ----RIEKRQMDAAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTM--CRKDFWWTCNCEYS 780
CK Y + + S R++KR + A + +S+ I K +KPCPRC +P++KNGGC H+KC CR ++ W C+CE++
Sbjct: 9 CKEAYHEGDCNSLFEASGATSQAYRVDKRAAEQARW-----EEASKETIKKTTKPCPRCNVPVEKNGGCMHMKCPQPQCRLEWCWNCSCEWN 95
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A8C6H7B7_MUSSI (RBR-type E3 ubiquitin transferase n=1 Tax=Mus spicilegus TaxID=10103 RepID=A0A8C6H7B7_MUSSI) HSP 1 Score: 65.1 bits (157), Expect = 1.490e-9 Identity = 28/68 (41.18%), Postives = 43/68 (63.24%), Query Frame = 1
Query: 583 RIEKRQMDAAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTM--CRKDFWWTCNCEYS 780
R++KR + A + +S+ I K +KPCPRC +PI+KNGGC H+KC C+ ++ W C CE++
Sbjct: 13 RVDKRAAERARW-----EEASKETIKKTTKPCPRCNVPIEKNGGCMHMKCPQPQCKLEWCWNCGCEWN 75
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A6A6PSR3_9PEZI (RING-type domain-containing protein n=1 Tax=Neohortaea acidophila TaxID=245834 RepID=A0A6A6PSR3_9PEZI) HSP 1 Score: 69.7 bits (169), Expect = 1.530e-9 Identity = 29/69 (42.03%), Postives = 40/69 (57.97%), Query Frame = 1
Query: 628 ERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTMCRKDFWWTCNCEYSG-------QHKTGCAAWR 813
+ + S + K++K CP CG QKNGGCDH++CTMCR +F + C +Y HK+ CA WR
Sbjct: 152 KEEDKSTAALKKYAKLCPGCGRKFQKNGGCDHIRCTMCRHEFCYLCFADYKDIFGKGNHAHKSSCAHWR 220
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A1V8SMJ7_9PEZI (RING-type domain-containing protein n=2 Tax=Rachicladosporium TaxID=470018 RepID=A0A1V8SMJ7_9PEZI) HSP 1 Score: 69.3 bits (168), Expect = 1.540e-9 Identity = 39/105 (37.14%), Postives = 50/105 (47.62%), Query Frame = 1
Query: 469 LTLEGTIFWDTIECVNYPCKSYYRGVEIREVMPQSAIQRIEKRQMDAAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTMCRKDFWWTCNCEYSG 783
LT E F C++ C S G E Q + +D A L + S L+ K SKPCP+CGI +QK GGCDH+ C CR +F W C+ Y G
Sbjct: 120 LTTEEEFF----SCISAACSS---GAPFHEEKTCEEHQNALRVAVDHAEL-----NRESAALVKKISKPCPKCGISVQKAGGCDHMTCMKCRHEFCWPCSAAYRG 212
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A8C0L2Y8_CANLU (RBR-type E3 ubiquitin transferase n=1 Tax=Canis lupus dingo TaxID=286419 RepID=A0A8C0L2Y8_CANLU) HSP 1 Score: 65.1 bits (157), Expect = 1.700e-9 Identity = 24/51 (47.06%), Postives = 38/51 (74.51%), Query Frame = 1
Query: 634 DPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKCTM--CRKDFWWTCNCEYS 780
+ +S+ I K +KPCPRC +P++KNGGC H+KC C+ ++ WTC+CE++
Sbjct: 30 EEASKETIKKTTKPCPRCHVPVEKNGGCMHMKCPQPQCQLEWCWTCSCEWN 80
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Match: A0A5F9DAU5_RABIT (RBR-type E3 ubiquitin transferase n=1 Tax=Oryctolagus cuniculus TaxID=9986 RepID=A0A5F9DAU5_RABIT) HSP 1 Score: 64.7 bits (156), Expect = 2.080e-9 Identity = 30/68 (44.12%), Postives = 45/68 (66.18%), Query Frame = 1
Query: 583 RIEKRQMDAAYLVAGERDPSSQTLIDKHSKPCPRCGIPIQKNGGCDHVKC--TMCRKDFWWTCNCEYS 780
R+++R AA L E +S+ I K +KPCPRC +P++KNGGC H+KC + CR ++ W C CE++
Sbjct: 14 RVDER---AAELARWEE--ASKDTIQKTTKPCPRCHVPVEKNGGCMHMKCPQSQCRLEWCWHCGCEWN 76 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32122.8649.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig32122.8649.1 >prot_H-paniculata_contig32122.8649.1 ID=prot_H-paniculata_contig32122.8649.1|Name=mRNA_H-paniculata_contig32122.8649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=270bp MAHTMEPARTASKDEATWTPSTRDRGIVDSMVHNRSTETPDVVDVTGSETback to top mRNA from alignment at H-paniculata_contig32122:102..1807+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig32122.8649.1 ID=mRNA_H-paniculata_contig32122.8649.1|Name=mRNA_H-paniculata_contig32122.8649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1706bp|location=Sequence derived from alignment at H-paniculata_contig32122:102..1807+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig32122:102..1807+ >mRNA_H-paniculata_contig32122.8649.1 ID=mRNA_H-paniculata_contig32122.8649.1|Name=mRNA_H-paniculata_contig32122.8649.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1620bp|location=Sequence derived from alignment at H-paniculata_contig32122:102..1807+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |