mRNA_H-paniculata_contig32073.8636.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig32073.8636.1
Unique NamemRNA_H-paniculata_contig32073.8636.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5JXF7_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JXF7_9PHAE)

HSP 1 Score: 156 bits (394), Expect = 3.840e-38
Identity = 122/386 (31.61%), Postives = 187/386 (48.45%), Query Frame = 1
Query:    7 EIANGTFVPVEGWGRLVLRVSQPGGKSRVAMLNRVADVPELGRNLISTRRATYTSSKSFIDSANKASLGLGEEESL---------IFNVSASSGLYEVEAIRNAAGTAKAPTARRSSNHSVMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIM---PKGLKIGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQT----EGGSEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLG 1110
             +A G   P+ G+G + + +S  GG + + +L RVA VP L  NL+S         ++   + ++  L  G  ES+         + N   +   +   AI  A G AKA +A    N    D H    H+ + + R T +  G  L+G  R C  CSTAK     +P KT  RA    +R+++DL G  RV SL G  Y +I+ D Y+ +  V F+K +SDA  A + Y+AE      P  + +  +R+DNGG+F +GE      ++ I   F P  +P+YNGVAER LGL+++  ++  +Q  T            AEA+ +AC+  N + T S     +PYE W+G+  P      F     + K+ + HK     +KC  LG
Sbjct:  423 RVAAGETFPIVGYGDVTVTLSSRGGTTDL-LLKRVAHVPRLDYNLVSLTSLFDDGFQTKTLNKHELELERGGGESVYSPRCGNLYVHNGCRTHTEHAYTAI--APGDAKASSAPVEIN----DFHYAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSKLIPNKTSTRAAKRLQRVFMDLSGKARVQSLVGKWYTLIVKDVYTRWNRVYFLKHKSDAAEAFERYLAENRANGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAALAARIQAPTLYPGTPNYPSFWAEAIAWACNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPA-VYKVKRTHKSEPKAQKCFYLG 798          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5KVR5_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVR5_9PHAE)

HSP 1 Score: 138 bits (348), Expect = 4.780e-34
Identity = 86/272 (31.62%), Postives = 144/272 (52.94%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLK--IGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            + + H +  H+ + + R T +  G  L+G   AC  CS +KA R  + ++T +R+     R++ DLGG   + S+GG  Y +I+ D ++    + F++ +SDA +A ++++A  +   G+   +  +R+DNGG F  G+     +E  I   F P  +PQYNGVAER LGL+ E  ++  +Q +   G      ++KL AEAM++AC+  N +   +   +++PYE WYG   P      F    Y R   +  K+   GE C  +G S +H
Sbjct:   34 INEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFADLGGRKDIASVGGKHYPIIVKDDFTRHTWMYFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGKFFGGDFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYP-FSKPAYCRWQ-RPSKLLPKGESCFYVGPSRDH 302          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5K1N9_9PHAE (Uncharacterized protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5K1N9_9PHAE)

HSP 1 Score: 143 bits (360), Expect = 1.120e-33
Identity = 94/275 (34.18%), Postives = 139/275 (50.55%), Query Frame = 1
Query:  316 ARRSSNH-SVMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIM---PKGLKIGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQT----EGGSEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLG 1110
            ARR S    + D H    H+ + + R T +  G  L+G  R C  CSTAK     +P KT  RA    +R +V+L G  R  SLGG  Y +I+ D Y+ +  V F+K +SDA  A + Y+ E      P  + +  +R+DNGG+F +GE      ++ I   F P  +P+YNGVAER LGL+++  I+  +Q  T          L AEA+ ++C+  N + T S     +PYE W+G+  P      F     + K+ + HK     +KC  LG
Sbjct:  299 ARRGSTPVDINDFHCAHGHSHEVLLRTTAKQQGTTLVGELRECLGCSTAKGLSEPIPNKTSTRAFKKLQRFFVELSGKARAQSLGGKWYTLIVKDDYTRWNRVYFLKHKSDAAEAFERYLKEKRADGAPSDVMV--VRSDNGGEFFEGEFGRVCRKYCIKQEFTPAHSPEYNGVAERALGLIKDAAIAARIQAPTLYPGAPNYRSLWAEAIAWSCNALNCTSTTSNPEKKSPYEMWHGHPPPPGATYPFLKPA-VYKVKRTHKSEPTAQKCFYLG 570          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5JV76_9PHAE (Integrase catalytic domain-containing protein (Fragment) n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JV76_9PHAE)

HSP 1 Score: 140 bits (354), Expect = 1.770e-33
Identity = 91/273 (33.33%), Postives = 146/273 (53.48%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEY---IMPKGLKIGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            + + H +  H+ + + R T +  G  L+G   AC  CS +KA R  + ++T +R+     R++VDLGG   + S+GG  Y +I+ D ++    + F+K  SDA  A ++++A     I+P  ++I  +R+DNGG+F  GE     +E  I   F P  +PQYNGVAER LGL+ E  ++  +Q +   G      ++KL AEAM++AC+  N +   +   +++PYE WYG   P      F    Y R   +  K+   GE C  +G S +H
Sbjct:  254 INEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWMYFLKNESDAGGAFRTFLASVRANIVPSFVEI--VRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDH 522          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5LL52_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5LL52_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 7.530e-32
Identity = 113/362 (31.22%), Postives = 167/362 (46.13%), Query Frame = 1
Query:   16 NGTFVPVEGWGRLVLRVSQPGGKSRVAMLNRVADVPELGRNLISTRRA-----TYTSSKSFIDSANKAS--LGLGEEESLIFNVSASSGLYEVE-------AIRNAAGTAKAPTARRSSNHSVMDMHRLLTHASDKITRDTTESAGVVLMGG-WRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEY---IMPKGLKIGAIRTDNGGDFDGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISLMQDQTE-----GGSEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTF 1032
            N   VP  G+G + +     GG+  V +LN  A VPE   NL+S         TY+  K  +    +A   +       L+         Y++E       A     G AKA T    ++      H    H  +++ + T +  GV L GG    C  CS +K     + K TD RA     RL+++LGG M+  S+GG+ Y +II D  + +  V F+K +SDA AA + Y+A+Y    +P   ++   RTD GG+F G+        GI   F PP+TP+YNGVAER LGLL +  ++      E       S  L AEA++ AC   N + T    G+ +P E ++G   P+     F
Sbjct:   24 NNAPVPPLGYGDVTVVFLTEGGRVPVLILN-AAHVPESPHNLLSLSALAEEGHTYSGQKGGLTLTTRAGGKVWFPRPGKLLTQEG-----YQIEPKVDIACAATIVPGDAKAATPTDLNSD-----HNSHGHTHEELLQKTAKQQGVQLTGGPLLPCLGCSMSKGQVKPISKSTDTRAANKLFRLFLNLGGRMQFKSIGGNWYTLIIRDDCTRWTRVFFLKHKSDAAAAFEQYLADYRAETVP--CEVFVARTDGGGEFQGQFAEVCRRSGIKQEFTPPNTPKYNGVAERALGLLADSALASRIQAKEMFPDAPVSPGLWAEAISCACHQMNCTATTGNPGHKSPEELFHGTPPPVGSTHPF 372          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5JRL9_9PHAE (Integrase catalytic domain-containing protein n=2 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JRL9_9PHAE)

HSP 1 Score: 137 bits (346), Expect = 7.950e-32
Identity = 88/272 (32.35%), Postives = 145/272 (53.31%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLK--IGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            + + H +  H+ + + R T +  G  L+G   AC  CS +KA R  +  +T +R+     R++VDLGG   + S+GG  Y +I+ D ++    + F++ +SDA +A ++++A  +   G+   +  +R+DNGG+F  GE     +E  I   F P  +PQYNGVAER LGL+ E  ++  +Q +   G      ++KL AEAM++AC+  N +   +   +++PYE WYG   P      F    Y R   +  K+   GE C  +G S +H
Sbjct:  187 INEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVGETKRRSDKKLGRVFVDLGGRKDIASVGGKHYPMIVKDDFTRRTWICFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGEFFGGEFTSVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDH 455          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5L3Y0_9PHAE (Integrase catalytic domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L3Y0_9PHAE)

HSP 1 Score: 136 bits (342), Expect = 2.310e-31
Identity = 88/272 (32.35%), Postives = 144/272 (52.94%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLK--IGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            + + H +  H+ + + R T +  G  L+G   AC  CS +KA R  + ++T +R+     R++VDLGG     S+GG  Y +I+ D ++    + F++ +SDA +A ++++A  +   G+   +  +R+DNGG+F  GE     +E  I   F P  +PQYNGVAER LGL+ E  ++  +Q +   G      ++KL AEAM++AC+  N +   +   ++ PYE WYG   P      F    Y R   +  K+   GE C  +G S +H
Sbjct:  132 INEFHNIYAHSHEGLLRTTAKRLGTKLVGDMHACSGCSMSKAIRKGIVRETKRRSDKKLGRVFVDLGGRKDSASVGGKHYPMIVKDDFTRRTWMYFLRNKSDAGSAFRTFLAS-VRANGVPSFVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSMPPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPTKLLPKGESCFYVGPSRDH 400          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5JBA7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JBA7_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 4.890e-31
Identity = 91/272 (33.46%), Postives = 141/272 (51.84%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLK--IGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            V + H +  H+   + R T +  G  L+G    C  CS AKA +  + ++T  R+     R++VDLGG   V S+GG  Y +I+ D ++    + F+K +SDA  A +S++A  +   G+   +  +R+DNGG+F  GE     +E  I   F P  +PQYNGVAER LGL+ E  ++  +Q +   G      ++KL AEAM++AC+  N +   +   + +PYE WYG   P      F    Y R   +  K+   GE C  +G S +H
Sbjct:  666 VNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDH 934          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5KZH7_9PHAE (Uncharacterized protein n=3 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KZH7_9PHAE)

HSP 1 Score: 135 bits (340), Expect = 4.980e-31
Identity = 91/272 (33.46%), Postives = 141/272 (51.84%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLK--IGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            V + H +  H+   + R T +  G  L+G    C  CS AKA +  + ++T  R+     R++VDLGG   V S+GG  Y +I+ D ++    + F+K +SDA  A +S++A  +   G+   +  +R+DNGG+F  GE     +E  I   F P  +PQYNGVAER LGL+ E  ++  +Q +   G      ++KL AEAM++AC+  N +   +   + +PYE WYG   P      F    Y R   +  K+   GE C  +G S +H
Sbjct:  373 VNEFHNIYAHSHKGLLRTTAKRLGTELVGEMHECTGCSMAKAVKKGIARETKSRSDKKLGRVFVDLGGRKDVASVGGKHYPMIVKDDFTRRAWMYFLKHKSDAGMAFRSFLAS-VRADGVPSLVEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAYSPQYNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDKLWAEAMHWACEAMNHTACSANPDSKSPYEMWYGEPRPARPYP-FLKPAYCRWQ-RPSKLLPKGESCFYVGPSRDH 641          
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Match: A0A6H5JH25_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH25_9PHAE)

HSP 1 Score: 134 bits (336), Expect = 1.650e-30
Identity = 90/272 (33.09%), Postives = 141/272 (51.84%), Query Frame = 1
Query:  340 VMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRCSTAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDGYSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLK--IGAIRTDNGGDF-DGELHLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISL-MQDQTEGG------SEKLLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYMRKIIKEHKMASCGEKCIMLGISHNH 1125
            V D H +  HA + + R T +  G+ L G   AC  CS  KA R A+   T   +     R++V+LGG   V S+GG  Y +I+ D ++    + F++ +SDA +A +S++A  +   G+   I  +R+DNGG+F  GE     +E  I   F P  +P++NGVAER LGL+ E  ++  +Q +   G      +++L AEAM++AC+  N +   +   + +PYE WYG   P      F    Y  K  +  K+   GE C  +G S +H
Sbjct:  393 VNDFHNIYGHAHEGMLRTTAKRLGIELTGKMHACSGCSMGKAIRKAIAHVTTNSSDKKLGRVFVNLGGKKGVASIGGKHYPMILKDDFTRRAWMYFLRSKSDAGSAFRSFLAN-VRADGIPSLIEIVRSDNGGEFFGGEFASVCNELLIKQEFTPAHSPEFNGVAERGLGLIEEAAMAARIQAKVLFGHVQLPKTDRLWAEAMHWACEALNHTACSANPDSKSPYEMWYGEARPARPYP-FLKPAYC-KWQRPSKLLPKGESCFYVGPSRDH 661          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig32073.8636.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JXF7_9PHAE3.840e-3831.61Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5KVR5_9PHAE4.780e-3431.62Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5K1N9_9PHAE1.120e-3334.18Uncharacterized protein (Fragment) n=1 Tax=Ectocar... [more]
A0A6H5JV76_9PHAE1.770e-3333.33Integrase catalytic domain-containing protein (Fra... [more]
A0A6H5LL52_9PHAE7.530e-3231.22Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JRL9_9PHAE7.950e-3232.35Integrase catalytic domain-containing protein n=2 ... [more]
A0A6H5L3Y0_9PHAE2.310e-3132.35Integrase catalytic domain-containing protein n=1 ... [more]
A0A6H5JBA7_9PHAE4.890e-3133.46Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]
A0A6H5KZH7_9PHAE4.980e-3133.46Uncharacterized protein n=3 Tax=Ectocarpus sp. CCA... [more]
A0A6H5JH25_9PHAE1.650e-3033.09Uncharacterized protein n=1 Tax=Ectocarpus sp. CCA... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig32073contigH-paniculata_contig32073:1295..2425 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeMetazoa
Seed ortholog score134.4
Seed ortholog evalue1.1e-28
Seed eggNOG ortholog400682.PAC_15712908
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Encoded by
EggNOG OGs38DPC@33154,3BI7U@33208,COG2801@1,KOG0017@2759
COG Functional cat.L
Best tax levelMetazoa
Best eggNOG OGNA|NA|NA
Exons1
Model size1131
Cds size1131
Stop0
Start1
Relationships

The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929988.8925455-CDS-H-paniculata_contig32073:1294..24251622929988.8925455-CDS-H-paniculata_contig32073:1294..2425Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig32073 1295..2425 +
1691481099.8483667-CDS-H-paniculata_contig32073:1294..24251691481099.8483667-CDS-H-paniculata_contig32073:1294..2425Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig32073 1295..2425 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig32073.8636.1prot_H-paniculata_contig32073.8636.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig32073 1295..2425 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig32073.8636.1

>prot_H-paniculata_contig32073.8636.1 ID=prot_H-paniculata_contig32073.8636.1|Name=mRNA_H-paniculata_contig32073.8636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=377bp
MCEIANGTFVPVEGWGRLVLRVSQPGGKSRVAMLNRVADVPELGRNLIST
RRATYTSSKSFIDSANKASLGLGEEESLIFNVSASSGLYEVEAIRNAAGT
AKAPTARRSSNHSVMDMHRLLTHASDKITRDTTESAGVVLMGGWRACKRC
STAKAHRFAVPKKTDKRATWAAERLYVDLGGPMRVTSLGGSSYLVIIVDG
YSWFQAVKFIKKRSDATAALQSYIAEYIMPKGLKIGAIRTDNGGDFDGEL
HLKLDEHGISHGFIPPDTPQYNGVAERRLGLLREKTISLMQDQTEGGSEK
LLAEAMNYACDITNMSYTLSIEGNVTPYEKWYGNTAPMEHLQTFGTVGYM
RKIIKEHKMASCGEKCIMLGISHNHSS
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mRNA from alignment at H-paniculata_contig32073:1295..2425+

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig32073.8636.1 ID=mRNA_H-paniculata_contig32073.8636.1|Name=mRNA_H-paniculata_contig32073.8636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1131bp|location=Sequence derived from alignment at H-paniculata_contig32073:1295..2425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGTGAAATCGCCAACGGGACATTCGTGCCGGTAGAGGGGTGGGGACG CCTTGTGCTTCGAGTAAGTCAACCGGGGGGAAAATCACGGGTAGCAATGT TAAACAGGGTTGCCGACGTACCCGAGCTCGGGCGTAATTTAATCTCCACA CGCCGAGCAACATATACATCGAGTAAATCGTTCATAGACAGTGCCAACAA AGCAAGCCTGGGGCTGGGGGAGGAGGAGAGCCTTATTTTCAACGTATCAG CATCTTCAGGACTGTATGAGGTGGAGGCCATTCGGAATGCTGCGGGAACA GCAAAAGCTCCGACGGCGAGAAGATCCTCGAATCACAGCGTCATGGACAT GCACCGACTGCTCACGCATGCGAGCGACAAGATCACAAGGGATACGACGG AATCGGCCGGCGTCGTGCTGATGGGTGGGTGGAGGGCCTGCAAACGATGC TCCACTGCAAAGGCTCACCGATTCGCCGTGCCGAAAAAGACCGACAAACG AGCCACATGGGCAGCGGAGCGCCTGTACGTCGACCTGGGCGGACCCATGC GAGTAACCAGCTTGGGCGGTAGCTCGTATTTGGTGATTATCGTCGACGGC TACTCATGGTTCCAGGCTGTCAAGTTCATCAAGAAGAGGAGCGATGCCAC TGCAGCTCTCCAGAGCTACATCGCCGAATATATCATGCCGAAGGGACTCA AGATTGGCGCCATTCGTACGGACAACGGCGGGGATTTCGACGGCGAATTG CACCTCAAGCTGGACGAGCACGGCATTAGTCACGGCTTCATACCCCCGGA CACGCCGCAATACAACGGCGTTGCCGAAAGGCGGCTGGGTCTCCTCCGCG AGAAAACGATCTCATTGATGCAGGATCAGACGGAGGGGGGCAGCGAGAAG CTATTGGCGGAGGCGATGAACTACGCCTGCGACATCACCAATATGAGCTA CACTTTGTCCATCGAAGGAAATGTTACCCCGTACGAGAAGTGGTACGGGA ATACAGCGCCGATGGAACACCTACAAACTTTTGGGACGGTGGGCTACATG CGCAAGATCATCAAGGAACACAAGATGGCGTCATGCGGAGAGAAGTGCAT CATGCTGGGTATTTCCCACAACCACTCGAGC
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Coding sequence (CDS) from alignment at H-paniculata_contig32073:1295..2425+

>mRNA_H-paniculata_contig32073.8636.1 ID=mRNA_H-paniculata_contig32073.8636.1|Name=mRNA_H-paniculata_contig32073.8636.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2262bp|location=Sequence derived from alignment at H-paniculata_contig32073:1295..2425+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTGTGAAATCGCCAACGGGACATTCGTGCCGGTAGAGGGGTGGGGACG
CCTTGTGCTTCGAGTAAGTCAACCGGGGGGAAAATCACGGGTAGCAATGT
TAAACAGGGTTGCCGACGTACCCGAGCTCGGGCGTAATTTAATCTCCACA
CGCCGAGCAACATATACATCGAGTAAATCGTTCATAGACAGTGCCAACAA
AGCAAGCCTGGGGCTGGGGGAGGAGGAGAGCCTTATTTTCAACGTATCAG
CATCTTCAGGACTGTATGAGGTGGAGGCCATTCGGAATGCTGCGGGAACA
GCAAAAGCTCCGACGGCGAGAAGATCCTCGAATCACAGCGTCATGGACAT
GCACCGACTGCTCACGCATGCGAGCGACAAGATCACAAGGGATACGACGG
AATCGGCCGGCGTCGTGCTGATGGGTGGGTGGAGGGCCTGCAAACGATGC
TCCACTGCAAAGGCTCACCGATTCGCCGTGCCGAAAAAGACCGACAAACG
AGCCACATGGGCAGCGGAGCGCCTGTACGTCGACCTGGGCGGACCCATGC
GAGTAACCAGCTTGGGCGGTAGCTCGTATTTGGTGATTATCGTCGACGGC
TACTCATGGTTCCAGGCTGTCAAGTTCATCAAGAAGAGGAGCGATGCCAC
TGCAGCTCTCCAGAGCTACATCGCCGAATATATCATGCCGAAGGGACTCA
AGATTGGCGCCATTCGTACGGACAACGGCGGGGATTTCGACGGCGAATTG
CACCTCAAGCTGGACGAGCACGGCATTAGTCACGGCTTCATACCCCCGGA
CACGCCGCAATACAACGGCGTTGCCGAAAGGCGGCTGGGTCTCCTCCGCG
AGAAAACGATCTCATTGATGCAGGATCAGACGGAGGGGGGCAGCGAGAAG
CTATTGGCGGAGGCGATGAACTACGCCTGCGACATCACCAATATGAGCTA
CACTTTGTCCATCGAAGGAAATGTTACCCCGTACGAGAAGTGGTACGGGA
ATACAGCGCCGATGGAACACCTACAAACTTTTGGGACGGTGGGCTACATG
CGCAAGATCATCAAGGAACACAAGATGGCGTCATGCGGAGAGAAGTGCAT
CATGCTGGGTATTTCCCACAACCACTCGAGCATGTGTGAAATCGCCAACG
GGACATTCGTGCCGGTAGAGGGGTGGGGACGCCTTGTGCTTCGAGTAAGT
CAACCGGGGGGAAAATCACGGGTAGCAATGTTAAACAGGGTTGCCGACGT
ACCCGAGCTCGGGCGTAATTTAATCTCCACACGCCGAGCAACATATACAT
CGAGTAAATCGTTCATAGACAGTGCCAACAAAGCAAGCCTGGGGCTGGGG
GAGGAGGAGAGCCTTATTTTCAACGTATCAGCATCTTCAGGACTGTATGA
GGTGGAGGCCATTCGGAATGCTGCGGGAACAGCAAAAGCTCCGACGGCGA
GAAGATCCTCGAATCACAGCGTCATGGACATGCACCGACTGCTCACGCAT
GCGAGCGACAAGATCACAAGGGATACGACGGAATCGGCCGGCGTCGTGCT
GATGGGTGGGTGGAGGGCCTGCAAACGATGCTCCACTGCAAAGGCTCACC
GATTCGCCGTGCCGAAAAAGACCGACAAACGAGCCACATGGGCAGCGGAG
CGCCTGTACGTCGACCTGGGCGGACCCATGCGAGTAACCAGCTTGGGCGG
TAGCTCGTATTTGGTGATTATCGTCGACGGCTACTCATGGTTCCAGGCTG
TCAAGTTCATCAAGAAGAGGAGCGATGCCACTGCAGCTCTCCAGAGCTAC
ATCGCCGAATATATCATGCCGAAGGGACTCAAGATTGGCGCCATTCGTAC
GGACAACGGCGGGGATTTCGACGGCGAATTGCACCTCAAGCTGGACGAGC
ACGGCATTAGTCACGGCTTCATACCCCCGGACACGCCGCAATACAACGGC
GTTGCCGAAAGGCGGCTGGGTCTCCTCCGCGAGAAAACGATCTCATTGAT
GCAGGATCAGACGGAGGGGGGCAGCGAGAAGCTATTGGCGGAGGCGATGA
ACTACGCCTGCGACATCACCAATATGAGCTACACTTTGTCCATCGAAGGA
AATGTTACCCCGTACGAGAAGTGGTACGGGAATACAGCGCCGATGGAACA
CCTACAAACTTTTGGGACGGTGGGCTACATGCGCAAGATCATCAAGGAAC
ACAAGATGGCGTCATGCGGAGAGAAGTGCATCATGCTGGGTATTTCCCAC
AACCACTCGAGC
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