mRNA_H-paniculata_contig3196.8603.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: D7FW43_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FW43_ECTSI) HSP 1 Score: 120 bits (301), Expect = 2.040e-30 Identity = 52/69 (75.36%), Postives = 60/69 (86.96%), Query Frame = 2
Query: 254 IPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEFAKK 460
+P+E +SEKWD CLERT+INFG G+VA GL VVLTR+PGMRRAV+GFG GCGVGSSWV CSQ+FAKK
Sbjct: 9 VPSEFKISEKWDVCLERTVINFGAGVVAAGLAGVVLTRSPGMRRAVMGFGAGCGVGSSWVICSQDFAKK 77
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: A0A835YM07_9STRA (Uncharacterized protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YM07_9STRA) HSP 1 Score: 108 bits (271), Expect = 6.150e-26 Identity = 44/69 (63.77%), Postives = 60/69 (86.96%), Query Frame = 2
Query: 251 QIPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEFAK 457
++P+EM++SE+WD CLERTLINFG G++ GGL++VVLTR+PG +RA++GFG G GVG+SWV CSQ F +
Sbjct: 13 KVPSEMLISEQWDECLERTLINFGTGLLVGGLSAVVLTRSPGAKRALMGFGAGAGVGASWVHCSQAFER 81
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: A0A8K1CHY9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CHY9_PYTOL) HSP 1 Score: 83.2 bits (204), Expect = 4.010e-16 Identity = 35/67 (52.24%), Postives = 44/67 (65.67%), Query Frame = 2
Query: 251 QIPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEF 451
+IP+E +SEKWD C+E ++F G+VAGGLTS+VL R G R + GFG G G GSSW C F
Sbjct: 10 EIPSEYRISEKWDKCIENFALHFSAGLVAGGLTSIVLARTGGARGVLTGFGAGAGAGSSWTTCQLAF 76
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: A0A1W0A8T9_9STRA (Uncharacterized protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1W0A8T9_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 5.980e-16 Identity = 35/66 (53.03%), Postives = 45/66 (68.18%), Query Frame = 2
Query: 254 IPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEF 451
IP+E +SEKWD C+E ++NF G+VAGGLTS+VL R R A+ GFG G G G++W CS F
Sbjct: 8 IPSEYRISEKWDKCIESFVVNFSAGLVAGGLTSLVLARTGSGRAALTGFGAGTGAGATWTTCSLAF 73
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: K8Z5X9_NANGC (Uncharacterized protein n=2 Tax=Monodopsidaceae TaxID=425072 RepID=K8Z5X9_NANGC) HSP 1 Score: 81.6 bits (200), Expect = 9.220e-16 Identity = 35/70 (50.00%), Postives = 48/70 (68.57%), Query Frame = 2
Query: 251 QIPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEFAKK 460
++P+E+ +SEKWD CLERT++N G V G L+ VL R R V G GCGVG+SWV+C+Q+F +K
Sbjct: 14 KVPSELYISEKWDKCLERTVVNVASGAVLGLLSGFVLARTGHGRSLVAAVGVGCGVGASWVRCAQDFEEK 83
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: A0A2D4BD84_PYTIN (Uncharacterized protein (Fragment) n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4BD84_PYTIN) HSP 1 Score: 83.2 bits (204), Expect = 1.310e-15 Identity = 37/67 (55.22%), Postives = 44/67 (65.67%), Query Frame = 2
Query: 251 QIPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEF 451
+IP+E +SEKWD CLE ++F G+VAGGLTSVVL R G R + GFG G G GSSW C F
Sbjct: 54 KIPSEYRISEKWDKCLENFALHFTAGLVAGGLTSVVLARTGGARGVLTGFGAGAGAGSSWTTCQLAF 120
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: A0A3M6VCD6_9STRA (Uncharacterized protein n=3 Tax=Peronosporaceae TaxID=4777 RepID=A0A3M6VCD6_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.390e-15 Identity = 36/68 (52.94%), Postives = 44/68 (64.71%), Query Frame = 2
Query: 251 QIPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEFA 454
+IP+E +SEKWD CLE + FG G+VAGGLTS+VL R+ R + G G G G GSSW C FA
Sbjct: 6 EIPSEYRISEKWDKCLENFTLYFGAGLVAGGLTSLVLARSGAGRGLITGLGAGTGAGSSWTTCQMAFA 73
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: F0WAP1_9STRA (Uncharacterized protein AlNc14C47G3755 n=2 Tax=Albugo TaxID=65356 RepID=F0WAP1_9STRA) HSP 1 Score: 82.0 bits (201), Expect = 1.390e-15 Identity = 35/66 (53.03%), Postives = 43/66 (65.15%), Query Frame = 2
Query: 254 IPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEF 451
IP+E +SEKWD C E L++F G+VAGGLTS+VL R+ R + GFG G G GSSW C F
Sbjct: 15 IPSEYKISEKWDRCFENFLLHFSAGVVAGGLTSLVLARSGSARGLITGFGAGAGSGSSWTTCQMAF 80
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: W4H665_9STRA (Uncharacterized protein n=5 Tax=Aphanomyces astaci TaxID=112090 RepID=W4H665_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.590e-15 Identity = 34/68 (50.00%), Postives = 47/68 (69.12%), Query Frame = 2
Query: 257 PAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEFAKK 460
P+E +SEKWD C+E ++NF G+VAGG+TS+VL R R A+ GFG G GVG++W CS F ++
Sbjct: 35 PSEYRISEKWDKCVESFVVNFSAGLVAGGVTSLVLARTSAGRAALTGFGAGAGVGATWTTCSLAFEEE 102
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Match: A0A024UH24_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024UH24_9STRA) HSP 1 Score: 81.6 bits (200), Expect = 1.590e-15 Identity = 34/71 (47.89%), Postives = 49/71 (69.01%), Query Frame = 2
Query: 248 LQIPAEMVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGVGSSWVQCSQEFAKK 460
++ P+E +SEKWD C+E ++NF G+VAGG+TS+VL R R A+ GFG G GVG++W CS F ++
Sbjct: 32 VKTPSEYRISEKWDKCVESFVVNFSAGLVAGGVTSLVLARTGAGRAALTGFGAGAGVGATWTTCSLAFEEE 102 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3196.8603.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 24
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3196.8603.1 >prot_H-paniculata_contig3196.8603.1 ID=prot_H-paniculata_contig3196.8603.1|Name=mRNA_H-paniculata_contig3196.8603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=66bp MVVSEKWDACLERTLINFGIGIVAGGLTSVVLTRAPGMRRAVLGFGGGCGback to top mRNA from alignment at H-paniculata_contig3196:5850..9422- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3196.8603.1 ID=mRNA_H-paniculata_contig3196.8603.1|Name=mRNA_H-paniculata_contig3196.8603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=3573bp|location=Sequence derived from alignment at H-paniculata_contig3196:5850..9422- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3196:5850..9422- >mRNA_H-paniculata_contig3196.8603.1 ID=mRNA_H-paniculata_contig3196.8603.1|Name=mRNA_H-paniculata_contig3196.8603.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=396bp|location=Sequence derived from alignment at H-paniculata_contig3196:5850..9422- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |