mRNA_H-paniculata_contig3194.8599.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D7G8D9_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G8D9_ECTSI) HSP 1 Score: 638 bits (1646), Expect = 5.790e-212 Identity = 347/643 (53.97%), Postives = 427/643 (66.41%), Query Frame = 1
Query: 304 SSAVVSQGEDQIWGEQGGRSCRGKITKRHMLALGALAGGAALALGLFMGLSNDVSGSSSRAVGQATDPASLGCFYDRRYSRLMTDVLSDEALTPPVCKDYCDGVGAAYYGLQYGKECWCGDVGIELDRFAEDGDGAVCDYPCSGDSSSICGGYLAMTVYDIGTDATEPIEEEAPTXXXXXXXXXSTECSGDPTYRWASSSNIMYIESGGCGTLTGIYEAYPS-GPVKVLDEDDNVVEGGSPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSEVQSPSA-DC---AKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCA---DLSNP---EVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDV--SNGRPSGNVFENNKIYNT--EVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACVDGSADWAIG 2187
S+A + DQIWG GR GK+T++ ++A GAL G AALA+GL++GL +D S + GQ+ DP SLGCF D R+M L+D+A+TP +C YC+ +G YY +Q+ ECWC D A G G CD+ C GDS ICGG+ A TVY++GT++T P +T C T R+ + +I Y E GGCGTLT +YEA GP+ VLDE+++VV GG+PTGYWLL +L V DG+ HG + GD DVLR+ S SDDF EVRG+GG+L F T VTSWDTD G++++ DGRSFINCV++ + DC + + GECRMDII+S MG++GWFDAESYGLTWKVRG C D P E+F++ VYGDI S+IYGMYYG YSYGHQGGVW +N M DNI YGFDPHDDSDDL I+ N V+GNGNHGIIASKRCN+V I +NEVY GGEDAVGIFLHRSSD A V++N V+ MQDAG+A+MES D IYDN F N +YGIR+SLG N T YGLYTY GSD PDV SNGRPS NVF+ N I +G IK+GD N FI N FTG +EFEDS +T W +NT G C+DGS D+A G
Sbjct: 8 SNAAAADTGDQIWG---GRQSSGKLTRKRVMAGGALLGAAALAVGLYVGLKDDSSTDRTLITGQS-DPNSLGCFADTSDGRVMEAQLTDQAMTPDMCNAYCEDLGYYYYAVQWSIECWCAPETTTADELAVHGLG-TCDFACGGDSDQICGGFWAFTVYEVGTESTTPTPSA------------TTSCDSAATVRF--TDDIAYFEGGGCGTLTQMYEAQEGDGPLYVLDENNDVV-GGTPTGYWLLDRNLRVVDGSTLLVHGTAASGDADVLRLLST-SDDFIEVRGYGGNLHFQSTTVTSWDTDNGQEREWDGDGRSFINCVTQFDDSAIWDCDGRSNQEWGECRMDIISSTMGNMGWFDAESYGLTWKVRGACEIDPDTGVPYNHEIFEDHNVYGDILNSEIYGMYYGHYSYGHQGGVWDSNIMRDNIQYGFDPHDDSDDLTISNNIVYGNGNHGIIASKRCNNVKIFNNEVYDGGEDAVGIFLHRSSDGAEVHDNVVYNMQDAGMAMMESYDANIYDNSFTNCRYGIRLSLGSGRNIITNNLFSGITQYGLYTYMGSDDPDVPNSNGRPSDNVFDGNTIETDGDNIGVHIKEGDSNVFIDNVFTGVSTYEFEDSSDTTWVDNT--GGGCLDGSTDFAEG 627
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D8LC73_ECTSI (Mannuronan C-5-epimerase 4 n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LC73_ECTSI) HSP 1 Score: 566 bits (1460), Expect = 7.300e-181 Identity = 320/605 (52.89%), Postives = 392/605 (64.79%), Query Frame = 1
Query: 511 SLGCFYDRRYSRLMT--DVLS-DEALTPPVCKDYCDGVGAAYYGLQYGKECWCGDVGIELDRFAEDGDGAVCDYPCSGDSSSICGGYLAMTVYDIGTDATEPIEEEAPTXXXXXXXXX-----------------STECSGD---PTYRWASSSNI---MYIESGGCGTLTGIY-------EAYPSGPVKVLDEDDNVVEGGSP-TGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSEVQSPSADC---AKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACV--DGSADWAIGSDPPPDC 2208
S+GCF D R+++ +LS + +T C D+C+G + Y+G +Y EC+C G D G+ + CD CSGDSS CGG+ A+ VY + D P XXXXXXXXX S+ C D P++R+A+SS + +Y E GC T+T +Y + GPV +LD+D ++ S T WLL + L + G VF C G S GGDC+ LRIQS GSDDFHEVRGHGGSL F T VTSWDT E Q++YE+GRSF+NCVSE + DC AKN++GECRMDIINSE+ LG+FD+ESYG+TWKVRGFC DLSNPEVF+ VYGD+ GSDI+ +YYG YSYGHQGGVWTNNKMHDN YGFDPHDDSD L IA+NEV+ N NHGIIASKRCN+V I +NEV GG A GIFLHRSSD A V++N + MQDAGIA++ES D +IY N+ KYGIR+SLG NN+ + YGLYTYEGSD PDVS+GRPSGNV N + + +G KIK+GDDNEF N F + FEF +S NT WS N I DG C+ D D A GSD P C
Sbjct: 289 SVGCFVDDSSDRVLSGDSMLSINSVMTAAYCADFCEG--STYFGTEYAFECFCSSSGDSPDEL---GEASNCDMTCSGDSSETCGGFNAIQVYML-EDGPAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLMEISSSCGDDEDRPSFRYAASSGVAGRLYAEGEGCFTMTDLYNFRGTENDGSSKGPVYMLDDDGTKLDIPSGITNNWLLAAELYITGGGVFYCKGTSAGGDCNQLRIQSTGSDDFHEVRGHGGSLYFEDTIVTSWDTPNKEPQETYENGRSFLNCVSEKLTGD-DCEGNAKNEMGECRMDIINSEIAYLGYFDSESYGMTWKVRGFCKDLSNPEVFELTNVYGDLTGSDIHHLYYGHYSYGHQGGVWTNNKMHDNWQYGFDPHDDSDYLTIAYNEVYNNVNHGIIASKRCNNVKIFENEVRDGGAAAAGIFLHRSSDGAAVFDNTITNMQDAGIAMLESFDAQIYGNIINGAKYGIRMSLGSGNNEVYQNSFTDISQYGLYTYEGSDEPDVSDGRPSGNVLALNLVEDCPIGVKIKEGDDNEFYQNTFINVDAFEFPESTNTMWSGNDIGDG-CIEEDDEFDAASGSDSIPIC 885
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: A0A6H5JNF5_9PHAE (MEP13 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JNF5_9PHAE) HSP 1 Score: 478 bits (1231), Expect = 6.880e-148 Identity = 252/448 (56.25%), Postives = 305/448 (68.08%), Query Frame = 1
Query: 913 YIESGGCGTLTGIYEAY----PSGPVKVLDEDDNVVEGGSPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSEVQSPSADC----AKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVS---NGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEF----TGTEYFEFEDSENTFWSENTIPDGACVDG--SADWAIGSDPPPD 2205
YI GGC TLT IY A GP+ VLD +DNVV GGSPTGYWLLM + V +G++ Q HG GGD VLRIQS GS D++E+RGHGGSLSF TKVTSWDTD + +Y+ RSFI CVSE + D A N +GECRMDII SEMG++G+ AESYG++WKVRG+C++ NPEVF+ +V GDI SDIYGMYYG YS+GH GG+WT NKMHDN YGFDPHDDSD+LEIA+N VWGNGNHGIIASKRCN+V IH N VY GGE AVGIFLHRSSD+ V+ N V++M+DAG+AIMESM I+DN F NVKYGIR+S+G A N C YG+YTY+G+D P+ S +G N F N + E G KI+ + F N F +G EY FED E+ W+ N +PD C+ G + D+ D PD
Sbjct: 401 YIRGGGCATLTDIYTAQGGHNDDGPLFVLDSNDNVV-GGSPTGYWLLMRDIHVEEGSLLQVHGPDAGGDARVLRIQSTGSRDYYEIRGHGGSLSFMDTKVTSWDTDEKKVNTNYKKERSFIRCVSEELADKPDTCDGHAVNHMGECRMDIIRSEMGEMGYDAAESYGISWKVRGYCSEDPNPEVFERTRVRGDIIDSDIYGMYYGHYSFGHDGGIWTGNKMHDNAQYGFDPHDDSDNLEIAYNTVWGNGNHGIIASKRCNNVKIHHNTVYDGGEGAVGIFLHRSSDDCEVWGNTVYDMKDAGMAIMESMGAHIHDNTFTNVKYGIRLSVGAARNIVENNSFLECDQYGIYTYQGNDKPEASKDWDGLLVDNTFHANTV---EGGVKIQKAEGIVFTDNNFYEHSSGEEY-RFEDCEDVVWTNNRVPDDICLKGDKNIDYMKSYDSLPD 843
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: A0A6H5JGU8_9PHAE (MEP1 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JGU8_9PHAE) HSP 1 Score: 463 bits (1191), Expect = 3.550e-147 Identity = 243/446 (54.48%), Postives = 299/446 (67.04%), Query Frame = 1
Query: 919 ESGGCGTLTGIY-------EAYPSGPVKVLD-EDDNVVEGGSPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSE-VQSPSAD-CAKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVR---------GFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACVDGSADWAIGSDPP 2199
ES GC TLT +Y + GP+ +LD + S T WLL + L V +GA+F C G +GGDCD LRIQS G DD++EVRGHGGS+ F T VTSWDT + Q++YE GRSF+NCVSE + + D AKND+GECRMDIINSEMG +G+FD+ESYGLTWKVR GFC DLSNP+VF+ VYGDI+ SDI+ MYYG YSYGHQGGVWTNN+MHDN Y +A N+V+ N NHGIIASKRCN+V I+DN+V GG DAVGIFLHRSSDNA VY N + M DAGIA++ES + +I+DN + V++GIR+SLG N + C+ +GLYTY GSD PDVSNGRP+GN F NNK+ N+ G K K+ D+ NEFTGTE EF D++ T WS N++P G C+D S PP
Sbjct: 18 ESEGCFTLTDLYNFRGTENDGSSKGPLYMLDGSGSKITAPTSVTKKWLLEAELYVTNGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKQPQETYEGGRSFLNCVSEKLTGETCDGMAKNDMGECRMDIINSEMGYMGFFDSESYGLTWKVRRQAGRGVVRGFCKDLSNPDVFETTNVYGDIKNSDIHHMYYGHYSYGHQGGVWTNNEMHDNHQY------------VANNKVYNNYNHGIIASKRCNNVKIYDNQVSDGGPDAVGIFLHRSSDNAEVYGNKIWNMPDAGIALLESFNADIHDNEIDGVQFGIRMSLGSGGNSVYDNEFNDCSDWGLYTYMGSDEPDVSNGRPNGNTFNNNKVTNSAGGVKFKNSDNIVVTNNEFTGTEELEFYDAQATTWSGNSLPSGVCIDNITSDDGNSVPP 451
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D7FRR8_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FRR8_ECTSI) HSP 1 Score: 456 bits (1174), Expect = 5.890e-145 Identity = 236/441 (53.51%), Postives = 296/441 (67.12%), Query Frame = 1
Query: 919 ESGGCGTLTGIY-------EAYPSGPVKVLDEDDNVVEGGSPT-GYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSEVQSPSADCAKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGAC---VDGSADWAIGSDPPPDC 2208
+ GGC TL+ +Y GPV VLD +D V E + T G WLL + L V GA C G GG+C LRI+S DF E+RGHGG+L F T VTSWD D + Q++Y+DGRSFI CVSEV + CA N++GECRMDII+SEMG LG+ +E+YG+TWKVRGFC+DLSNP+VFD+V VYGD++GSDI+ MYYGMYS+GHQGGVWTNN MHDN YGFDPHDDSD L IA N+V+ N NHGIIASKRCN+V I+DNEVY GG DA GIFLHRS D++ VY N + M DAGIA++E+ +I+DN + ++GIRV LG +NNK + G++TY GSD P V GRP N F NN I TE G KIK+ D+ N F+GT EF ++ + WS N+IP C +D ++ + S P +C
Sbjct: 7 DGGGCFTLSDLYAWQGFYNNGNSKGPVFVLDSNDRVDETATTTTGKWLLTADLFVTGGATLYCRGKGVGGNCAELRIRSTSGSDFFEIRGHGGNLYFEDTIVTSWDVDGRKPQETYKDGRSFIRCVSEVLTGEDTCAINNMGECRMDIIDSEMGYLGYDASEAYGITWKVRGFCSDLSNPDVFDDVNVYGDMKGSDIHHMYYGMYSFGHQGGVWTNNLMHDNHQYGFDPHDDSDYLIIAGNKVYNNVNHGIIASKRCNNVKIYDNEVYDGGADAAGIFLHRSGDDSEVYGNTITNMGDAGIAMLETSGCDIHDNQVDGGEFGIRVHLGSSNNKVHDNVFKNIWNVGMFTYVGSDEPWVGGGRPCDNEFYNNTIQATETGVKIKESDNISITNNAFSGTTEIEFNNAIDIVWSGNSIPTNTCLEDIDNNSTFTGSSGLPLEC 447
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D8LRM4_ECTSI (Mannuronan C-5-epimerase N-terminal n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LRM4_ECTSI) HSP 1 Score: 456 bits (1172), Expect = 1.470e-143 Identity = 239/433 (55.20%), Postives = 292/433 (67.44%), Query Frame = 1
Query: 898 SSNIMYIESGGCGTLTGIY------EAYPSGPVKVLDEDDNVVEGGSP-TGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSEVQSPSADC---AKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPD--VSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACV 2160
+ N E GC T+T +Y + GP+ LD+ N V + WLL + L + GAVF C G S GGDCD LRIQS G DFHEVR HGGS+ F T VTSWDT Q +Y GRSF+NCVSE + C A+N++GECRMDIINSE+G LG+FD+ESYGLTWKVRGFC DLSNP+VFD VYG++ GSDI+ YYG YSYGHQGGVW NN+MHDN YGFDPHDDSD L IIASKRCN+V I++NEVY GG A GIFLHRSSD A+V++N VH+MQDAG+A++ESM+ +IY+N F +VK+GIR+SLG + N + ++ GLYTY+GSD P VS+GRPS N+FENN+I N G KIK+GDD N FTGT EF D++NT W NT+P G C+
Sbjct: 76 TGNTPDAEGEGCFTITDLYNFRLESDGSAKGPIFNLDDSYNTVLNPKVLSNKWLLTAELHITGGAVFYCRGSSIGGDCDELRIQSTGPTDFHEVRAHGGSMYFESTIVTSWDTPNKTPQATYVGGRSFLNCVSEKLTGEV-CVGQAQNEMGECRMDIINSEIGYLGYFDSESYGLTWKVRGFCKDLSNPDVFDTTNVYGNLIGSDIHHNYYGQYSYGHQGGVWHNNQMHDNHQYGFDPHDDSDYLT------------SIIASKRCNNVQIYNNEVYDGGPFAAGIFLHRSSDYAIVHDNVVHDMQDAGMAMLESMNADIYNNRFSSVKFGIRLSLGSSENHVHENLFEDVSTQGLYTYQGSDEPTDGVSDGRPSDNLFENNRILNVTKGVKIKEGDDTVITDNVFTGTSELEFFDAQNTRWKGNTLPQGVCI 495
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D7FWE8_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FWE8_ECTSI) HSP 1 Score: 465 bits (1196), Expect = 8.090e-143 Identity = 252/447 (56.38%), Postives = 294/447 (65.77%), Query Frame = 1
Query: 892 ASSSNIMYIESGGCGTLTGIYEAYP-SGPVKVLDEDDNVVEGG----SPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCV-----SEVQSPSADCAKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVS--NGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACVDGSADWAIGSDP 2196
++SS+ GGC TLT +Y SGP+ VLD +N+V GG SPTGYWLL SSL + DG HG S GGD DVLRIQS DDF E+RG GGSLSF T VTSWDTD GE++ YE GRSFINCV S++ S S K + GECRMDII+S MG++GWFDAESYGLTWKVRG C+DLSN E+ D+ VYGDI+GS+IYGMYYGMYSYGHQGGVWT+N M DNILYGFDPHDDSDDL IA N V+GNGNHGIIASKRCN+V I+ A+MES EIYDN EN KYGIR+SLG A+N D+ ++YGLYTY+GSD PDVS +GR N F+ N I NT+V KIK+GDDN F N F + FEFEDS +T W+ N I G C+D S D+A GS P
Sbjct: 402 STSSDSSSFSGGGCATLTDMYNTQSGSGPLYVLDSSNNIVSGGGGSASPTGYWLLTSSLEILDGVTLYVHGTSAGGDADVLRIQST-DDDFWEIRGWGGSLSFLETTVTSWDTDKGEERTEYEGGRSFINCVTQFDDSDIWSCSGRSNK-ERGECRMDIIDSTMGNMGWFDAESYGLTWKVRGLCSDLSNVEIMDDHNVYGDIKGSEIYGMYYGMYSYGHQGGVWTDNVMRDNILYGFDPHDDSDDLTIAGNTVYGNGNHGIIASKRCNNVEIY--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXALMESFRAEIYDNTIENCKYGIRLSLGSADNDIHDNTFDSSSTYGLYTYKGSDDPDVSGNDGRVKDNSFDANTISNTDVAMKIKEGDDNSFTNNVFENVKTFEFEDSTDTVWTNNDIG-GGCLDESTDFASGSIP 843
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D8LRN0_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LRN0_ECTSI) HSP 1 Score: 408 bits (1048), Expect = 1.600e-123 Identity = 249/585 (42.56%), Postives = 321/585 (54.87%), Query Frame = 1
Query: 517 GCFYDR-RYSRLMTDVLSDEALTPPVCKDYCDGVGAAYYGLQYGKECWCGD---VGIELDRFAEDGDGAVCDYPCSGDSSSICGGYLAMTVYDIGT-DATEPIEEEAPTXXXXXXXXXSTECSGDPTYRWASSS-------NIMYIESGGCGTLTGIYEAYP-SGPVKVLDEDDNVVEGGS----PTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAG-EQQKSYEDGRSFINCVSEVQSPSADCA---KNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACVDGSADWAIGSDPPPDC 2208
GCF D+ RL + V + + +T +C + C G A++GLQ+G+E CG G D D + SG S+ G D + T P+ P XXXXXX +T P + + Y +SGGC TLT +Y A +GP+ VLD +DN V+G PTG WLL S++ + D A G GGDCDVLRI+S GS + E+ GHGG++ F GTKVTSWDT G E++ +GRSFI C+++ + C+ D+G CRMDII+S MG++G+ +ESYGLTWKVRG C +LSN ++FD+ VYGDI+ SDIYGMYYGMYSYGH+GGVWTNNKMHDN+ YGFDPHDDSD+L IA N A +ES D +IYDN N KYGIR+SLG +N D + YGLYTY+GSD PDVSNGRP GN FE N + NT++G K+GDDN F N FT + FEFE S++T W+ N++ G C+D D+ GSD PDC
Sbjct: 102 GCFNDKPEPDRLFSYVTTMDDMTTELCANECKGY--AFFGLQWGREAGCGTCGGTGCSQRPGLTDSDCCIGKIEESGPLCSVTGKAPCFVDGDSSAPEQTSPVPSPTPKTXXXXXXRSATPTPPTPVPSGCDTKATVQIDKDTAYFKSGGCATLTDLYNAQDGTGPLWVLDSNDNKVDGAGGSAKPTGRWLLTSNIKIEDDATLFVEGKDRGGDCDVLRIESTGSK-YWEIFGHGGNMYFEGTKVTSWDTSKGKEREYKKNEGRSFIRCITQYDD-NYSCSGGSNKDMGTCRMDIIDSTMGNMGYDASESYGLTWKVRGLCKNLSNLKLFDKRNVYGDIKNSDIYGMYYGMYSYGHEGGVWTNNKMHDNVQYGFDPHDDSDNLVIAHNVXXXXXXXXXXXXXXXXXXXXX--XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAFLESFDADIYDNRIVNCKYGIRLSLGSGDNDITNNTFDNISKYGLYTYKGSDSPDVSNGRPKGNKFEGNTVSNTKIGVLGKEGDDNIFKNNVFTNVDTFEFEKSKDTEWTGNSLG-GGCLDRGKDFTKGSDTIPDC 679
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI) HSP 1 Score: 394 bits (1013), Expect = 1.110e-120 Identity = 219/466 (47.00%), Postives = 286/466 (61.37%), Query Frame = 1
Query: 862 ECSGD--PTYRWASSSNIMYIES------GGCGTLTGIYEAYPS-GPVKVLDEDDNVVEGGSPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSEVQSPSADC----AKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDV-SNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTE----YFEFEDSENTFWSENT----------IPDGACVDGSAD 2175
+C D + R+A ++ +Y+ES GGC TL I+E+ P+ +D D V + TG WLL L V DG + +G +GGD D LR+ S S+ + +R HGGSL F GTKV SWDT + DGRS+I+ VSE+ + + AKN +GE RMDI NSE+G LG+ D+ESYGLTWKVRGFC D SNPE+FD+V VYG++ SDI+ + +G+Y+YGHQ G W NKMHDN YGFDPHDDSD L I NEV+ NG HGIIASKRCN VSI NEVY G E + GIFLHRSSD+A+V NYVH+ DAG+A++ES + ++ +N FEN KYG+R+S+G A+N + Y YTY GSD PDV S+GR NVF N E KIK+ D +F+ N F + F+D+ N+ NT + + +C DG +D
Sbjct: 42 DCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSE-TETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLST-SETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVVSSGRSQNNVFSQNSFSGAEETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESD 505
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Match: D7FIU4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FIU4_ECTSI) HSP 1 Score: 387 bits (993), Expect = 7.380e-120 Identity = 214/409 (52.32%), Postives = 250/409 (61.12%), Query Frame = 1
Query: 982 VLDEDDN-VVEGGSPTGYWLLMSSLTVYDGAVFQCHGVSDGGDCDVLRIQSDGSDDFHEVRGHGGSLSFYGTKVTSWDTDAGEQQKSYEDGRSFINCVSE-VQSPSADC-AKNDLGECRMDIINSEMGDLGWFDAESYGLTWKVRGFCADLSNPEVFDEVQVYGDIQGSDIYGMYYGMYSYGHQGGVWTNNKMHDNILYGFDPHDDSDDLEIAFNEVWGNGNHGIIASKRCNDVSIHDNEVYSGGEDAVGIFLHRSSDNAVVYNNYVHEMQDAGIAIMESMDGEIYDNVFENVKYGIRVSLGGANNKXXXXXXDTCTSYGLYTYEGSDPPDVSNGRPSGNVFENNKIYNTEVGAKIKDGDDNEFIGNEFTGTEYFEFEDSENTFWSENTIPDGACVDGSADWAIGSDPP 2199
+LD+ N + S T WLL S L V DGA+F C G +GGDCD LRIQS G DD++EVRGHGGS+ F T VTSWDT + Q++YE GRSF+NCVSE + + D AKND GECRMDIINSEMG +G+FDAESYGLTWKVRGFC DLSNP+VF+ VYGDI+ S+I+ MYYGMYSYGHQGGVWTNN+MHDN YGFDPHDDSD L IA ASKRCN+V I++NEV GG +AVGIFLHRSSDNA VY G D PDVSNGRP+GN F NNKI NT G KIK+ D+ N+FTGTE EF D++ T WS+N++P G C+D S PP
Sbjct: 1 MLDDSGNKITSPTSVTKKWLLESELYVTDGAIFYCIGSEEGGDCDELRIQSTGPDDWYEVRGHGGSMYFSHTVVTSWDTPNKKPQETYEGGRSFLNCVSEKLTGETCDGKAKNDEGECRMDIINSEMGYMGFFDAESYGLTWKVRGFCKDLSNPDVFETTNVYGDIKNSNIHHMYYGMYSYGHQGGVWTNNEMHDNHQYGFDPHDDSDYLTIAXXXXXXXXXXXXXASKRCNNVQIYNNEVSDGGPEAVGIFLHRSSDNAEVYG-------------------------------------------------------GXXXXXXXDAPDVSNGRPNGNTFNNNKITNTAGGVKIKNSDNIVISNNDFTGTEELEFFDAQATTWSDNSLPSGVCIDNVTSDDGNSVPP 354 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3194.8599.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3194.8599.1 >prot_H-paniculata_contig3194.8599.1 ID=prot_H-paniculata_contig3194.8599.1|Name=mRNA_H-paniculata_contig3194.8599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=637bp MSSAVVSQGEDQIWGEQGGRSCRGKITKRHMLALGALAGGAALALGLFMGback to top mRNA from alignment at H-paniculata_contig3194:244..6729- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3194.8599.1 ID=mRNA_H-paniculata_contig3194.8599.1|Name=mRNA_H-paniculata_contig3194.8599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=6486bp|location=Sequence derived from alignment at H-paniculata_contig3194:244..6729- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3194:244..6729- >mRNA_H-paniculata_contig3194.8599.1 ID=mRNA_H-paniculata_contig3194.8599.1|Name=mRNA_H-paniculata_contig3194.8599.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3822bp|location=Sequence derived from alignment at H-paniculata_contig3194:244..6729- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |