mRNA_H-paniculata_contig31853.8581.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: D7G1X2_ECTSI (Hypothetical inner membrane leucine rich repeat protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7G1X2_ECTSI) HSP 1 Score: 182 bits (462), Expect = 3.630e-53 Identity = 87/123 (70.73%), Postives = 107/123 (86.99%), Query Frame = 1
Query: 31 EKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIF-SDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFSISRYT 396
E+VLNAGTHG+GF+ +I+G+ LLMTEAS+EGKS EHF+ CA+FS SLMFLYLASTL+H + + S +LCIADHCAIYILIAGSYTPFMLISMHGSSLG+ VII +W+ ALFGC+FS++ Y+
Sbjct: 244 EEVLNAGTHGVGFVAAIIGAFLLMTEASQEGKSPEHFWGCAIFSASLMFLYLASTLYHSFFMLPYVSGLLCIADHCAIYILIAGSYTPFMLISMHGSSLGRTVIIAQWLCALFGCLFSMTSYS 366
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A835ZJF6_9STRA (Inner membrane leucine rich repeat protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZJF6_9STRA) HSP 1 Score: 141 bits (355), Expect = 3.230e-37 Identity = 75/120 (62.50%), Postives = 95/120 (79.17%), Query Frame = 1
Query: 31 EKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIF-SDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFSIS 387
E+VLN+ +H LGFIMSI+G+ILLM+EAS +S F+ACAVFS SLM LYL+STLFH + + IL IADH AIY+LIAGSYTPF++I +HGS++G VV++ EWVAAL G +FSIS
Sbjct: 219 EEVLNSLSHALGFIMSIIGTILLMSEASGPERSPVQFWACAVFSTSLMILYLSSTLFHSFFVVPHVAYILQIADHVAIYLLIAGSYTPFLMIGLHGSTIGGVVVVVEWVAALVGSIFSIS 338
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A192H3Y8_9LACO (Hemolysin III n=3 Tax=Loigolactobacillus TaxID=2767889 RepID=A0A192H3Y8_9LACO) HSP 1 Score: 110 bits (275), Expect = 2.290e-27 Identity = 58/129 (44.96%), Postives = 90/129 (69.77%), Query Frame = 1
Query: 1 SPCAPKYITVEKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIFS---DILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMF 378
SP + +Y+ V +VLNA THG+GF++S++G I L+ +A+ G++ A ++ +LM LYL+STLFH S+IF+ + + DHC+IY+LIAGSYTP+ LI++H ++LG V+ WV A+FG +F
Sbjct: 8 SPFSRRYLIVNEVLNAVTHGIGFVLSVVGLIFLLIKANTIGQTV----AYTIYGITLMILYLSSTLFH---SLIFTRAKSVFQVFDHCSIYLLIAGSYTPYCLIALH-NTLGYVLCAVIWVLAIFGVIF 128
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A6V1P304_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1P304_HETAK) HSP 1 Score: 114 bits (284), Expect = 5.550e-27 Identity = 58/120 (48.33%), Postives = 82/120 (68.33%), Query Frame = 1
Query: 31 EKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESM-IFSDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFSIS 387
E+VLNA +H +GF+ + +G+ L+ EA G SA H +ACA++S LMFLY++STL+H + + + IL I DHCAIY LIAG+Y+P M+I + S VV+I EW+ GC+FSIS
Sbjct: 230 EEVLNAMSHAIGFVAAAIGAATLLGEAYATG-SARHIWACAIYSSCLMFLYISSTLYHSFFMLPLTNKILKICDHCAIYTLIAGTYSPLMMIGLRHSPTAVVVVIMEWLLCFLGCVFSIS 348
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: K8YVT8_NANGC (Hemolysin iii n=3 Tax=Monodopsidaceae TaxID=425072 RepID=K8YVT8_NANGC) HSP 1 Score: 113 bits (282), Expect = 1.990e-26 Identity = 60/136 (44.12%), Postives = 91/136 (66.91%), Query Frame = 1
Query: 10 APKYITV-EKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIFS-DILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFSISRYTYTNSN 411
APK V E++LN+ THGLGFI S++G++LLM+ AS G + H+++C +FS SLM LY++S+L+H + + D+L I DH IY+LIAGSY+P M+I++H S ++++ EW+ A G SI+ SN
Sbjct: 293 APKCNYVFEEILNSLTHGLGFIASVVGTLLLMSAASAPGTTPYHWWSCLLFSLSLMMLYISSSLYHSFFMLPHAKDVLQILDHVGIYLLIAGSYSPIMMIALHHSHRANLLLLLEWLTAFGGICVSIASSGVGVSN 428
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A7S3MG12_9STRA (Hypothetical protein n=1 Tax=Spumella elongata TaxID=89044 RepID=A0A7S3MG12_9STRA) HSP 1 Score: 106 bits (265), Expect = 3.180e-24 Identity = 50/118 (42.37%), Postives = 84/118 (71.19%), Query Frame = 1
Query: 31 EKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRR-ESMIFSDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFS 381
E++LN+ +HGL F+ +++G+ +L+++A+ S+ HF+AC ++SF+LMFL+L+S LFH S +L + DH IY++IAGS TPFML+++H + +V+I EW+AA G +F+
Sbjct: 213 EEILNSVSHGLAFLGAVVGANILISDAADVQGSSYHFWACVIYSFALMFLFLSSCLFHSFFMSPTTMRVLQVLDHVGIYLVIAGSMTPFMLVALHHHTAARVLICGEWIAAFLGSVFA 330
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: C5BAS8_EDWI9 (Channel forming cytolysin, putative n=11 Tax=Hafniaceae TaxID=1903412 RepID=C5BAS8_EDWI9) HSP 1 Score: 100 bits (250), Expect = 1.300e-23 Identity = 51/129 (39.53%), Postives = 82/129 (63.57%), Query Frame = 1
Query: 1 SPCAPKYITVEKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIFSDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFSIS 387
SP P Y E+V N+ +HG+GFI+ I+G +LL+ +A G SA + +++ S++ L+LASTL+H + L + DHCAIY+LIAG+YTPF+L+ + S L + ++ W+ AL G +F ++
Sbjct: 6 SPLQPGYSLTEEVANSISHGIGFILGIVGLVLLLLQAIGNGASAMAITSYSLYGGSMVLLFLASTLYHAIPNRAAKRWLKVFDHCAIYLLIAGTYTPFLLVGLD-SPLARGLMAVIWILALLGILFKLA 133
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A0R1KA36_9LACO (Hemolysin III n=3 Tax=Companilactobacillus TaxID=2767879 RepID=A0A0R1KA36_9LACO) HSP 1 Score: 100 bits (250), Expect = 1.300e-23 Identity = 45/134 (33.58%), Postives = 86/134 (64.18%), Query Frame = 1
Query: 16 KYITVEKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIFSDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCM---FSISRYTYTNS 408
+YI ++ +A THG+G I++I+G++ L+ + ++G E A +++F+L FLYL+STLFH + I DH +I+++IAG+YTP+ L+++ GS+ G +++ T W+ A+ G + F++ ++ Y +
Sbjct: 11 RYIITNEIFSAVTHGIGIILAIIGAVFLLIKGFKQGDPLE-ITAYFIYAFTLFFLYLSSTLFHSLYFTKAKGVFQIFDHSSIFLMIAGTYTPYCLVALRGSAFGIIILSTIWILAILGILYKIFNVGKFKYLET 143
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A1P8Q528_9LACO (Hemolysin III n=4 Tax=Companilactobacillus TaxID=2767879 RepID=A0A1P8Q528_9LACO) HSP 1 Score: 100 bits (249), Expect = 1.960e-23 Identity = 48/131 (36.64%), Postives = 83/131 (63.36%), Query Frame = 1
Query: 16 KYITVEKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIFSDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCM---FSISRYTY 399
+YI ++ +A THG+G I++++GS+ L+ + G E A +++F+L FLYL+STLFH + I DH +I+++IAG+YTPF LI++ GS+ G +++ WV A+FG + F++ R+ +
Sbjct: 13 RYIIKNEIFSAITHGIGIILAVIGSVFLLIKGFNNGDPLE-ITAYFIYAFTLFFLYLSSTLFHSLYFTKAKHVFQIFDHSSIFLMIAGTYTPFCLIALRGSAFGIIILSVIWVLAIFGILWKIFNVGRFKF 142
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Match: A0A376D7B1_9GAMM (Hemolysin n=7 Tax=Edwardsiella TaxID=635 RepID=A0A376D7B1_9GAMM) HSP 1 Score: 100 bits (248), Expect = 2.520e-23 Identity = 52/129 (40.31%), Postives = 81/129 (62.79%), Query Frame = 1
Query: 1 SPCAPKYITVEKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACAVFSFSLMFLYLASTLFHRRESMIFSDILCIADHCAIYILIAGSYTPFMLISMHGSSLGQVVIITEWVAALFGCMFSIS 387
SP P Y E+V N+ +HG+GFI+ I+G +LL+T A G +A + +++ S++ L+LASTL+H L I DHCAIY+LIAG+YTPF+L+ + S L + +++ W AL G +F ++
Sbjct: 5 SPPLPSYSLAEEVANSISHGIGFILGIVGLVLLLTHAIDSGANATAITSYSLYGGSMILLFLASTLYHAIPHPAAKRWLKIVDHCAIYLLIAGTYTPFLLVGLD-SPLARGLMVVIWSLALAGIIFKLA 132 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31853.8581.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31853.8581.1 >prot_H-paniculata_contig31853.8581.1 ID=prot_H-paniculata_contig31853.8581.1|Name=mRNA_H-paniculata_contig31853.8581.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=150bp SPCAPKYITVEKVLNAGTHGLGFIMSILGSILLMTEASREGKSAEHFYACback to top mRNA from alignment at H-paniculata_contig31853:675..1859- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31853.8581.1 ID=mRNA_H-paniculata_contig31853.8581.1|Name=mRNA_H-paniculata_contig31853.8581.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1185bp|location=Sequence derived from alignment at H-paniculata_contig31853:675..1859- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31853:675..1859- >mRNA_H-paniculata_contig31853.8581.1 ID=mRNA_H-paniculata_contig31853.8581.1|Name=mRNA_H-paniculata_contig31853.8581.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=900bp|location=Sequence derived from alignment at H-paniculata_contig31853:675..1859- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |