mRNA_H-paniculata_contig3185.8579.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3185.8579.1
Unique NamemRNA_H-paniculata_contig3185.8579.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: A3WYU0_9BRAD (Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb-311A TaxID=314253 RepID=A3WYU0_9BRAD)

HSP 1 Score: 72.4 bits (176), Expect = 1.790e-11
Identity = 46/143 (32.17%), Postives = 61/143 (42.66%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHPIGAEDGSGEVHAFEDHGAIRAL 1682
            H HG SCGH+AV H  HVD+L+ G      H   +T +    H ++ +      C+   G V                         GH  G +HGP CGH  + H  H+DY+VNGRL HP             +DHGAI  +
Sbjct:   11 HKHGPSCGHVAVKHGDHVDYLHDG------HLHHQTGDVVEEHTIEVNAENPDRCTPEFGHV-------------------------GHDAGHVHGPDCGHQAVPHGDHVDYLVNGRLHHPXXXX--------CDDHGAIEIV 114
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: A0A0K1NBC6_9BURK (Uncharacterized protein n=2 Tax=unclassified Ottowia TaxID=2645081 RepID=A0A0K1NBC6_9BURK)

HSP 1 Score: 70.1 bits (170), Expect = 1.430e-10
Identity = 44/143 (30.77%), Postives = 62/143 (43.36%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHPIGAEDGSGEVHAFEDHGAIRAL 1682
            H HG  CGH A+ H+ HVD+L  G     + G+           V++H                     + A  D + +G  P    GH  G +HGP CGH+ + H  HID++VNGRL HP G           +DHG +  +
Sbjct:   21 HQHGPGCGHTAIRHNGHVDYLQEGHLHHPHEGR-----------VQEH---------------------SIAVSDTNPEGCTPPCA-GHEPGHVHGPGCGHEAVPHGNHIDFLVNGRLHHPHGDH--------CDDHGPVEVV 122
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: UPI00138A3A8A (hypothetical protein n=2 Tax=Vibrio taketomensis TaxID=2572923 RepID=UPI00138A3A8A)

HSP 1 Score: 68.9 bits (167), Expect = 2.570e-10
Identity = 46/142 (32.39%), Postives = 61/142 (42.96%), Query Frame = 3 
Query: 1251 KHMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHPIGAEDGSGEVHAFEDHGAIR 1676
            +H HG  CGH A+ H  H+D+L                +G + H   DH      C      VI + + +  A + VH            CQG +HGP CGH+ I H  HIDY+V+GRL H  G           +DHG I 
Sbjct:   11 EHAHGKDCGHTAIRHGDHIDYLV---------------DGVLHHPHGDH------CD---EHVIEASEVNPNACNPVHT-----------CQGHVHGPGCGHEAIQHGDHIDYIVDGRLHHQHGEH--------CDDHGPIE 109
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: UPI000A05AADA (hypothetical protein n=1 Tax=Coraliomargarita akajimensis TaxID=395922 RepID=UPI000A05AADA)

HSP 1 Score: 68.9 bits (167), Expect = 2.710e-10
Identity = 45/144 (31.25%), Postives = 60/144 (41.67%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHPIGAEDGSGEVHAFEDHGAIRALD 1685
            H HG  CGH A+ H  HVD+L+               +G + H   D                G+ ++   A D  H  G        H  G +HGP CGH+ I H  HIDY+V+GRL HP G           +DHG +  +D
Sbjct:   11 HQHGKGCGHTAIQHGDHVDYLH---------------DGHLHHQNAD----------------GTVEKHILAVDASHPSGCCNHAT--HSDGHVHGPDCGHEAIQHGDHIDYIVDGRLHHPHGDH--------CDDHGPVTIVD 113
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: A0A7Y4E348_9VIBR (Uncharacterized protein n=4 Tax=Vibrio TaxID=662 RepID=A0A7Y4E348_9VIBR)

HSP 1 Score: 68.2 bits (165), Expect = 5.050e-10
Identity = 41/120 (34.17%), Postives = 52/120 (43.33%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLH 1613
            H HG +CGH A+ HD HVD+L                +G + H   DH      C            E      D + DG  P      C G +HGP CGH+ I H  H+DY+V+GRL H
Sbjct:   12 HAHGPNCGHTAIRHDGHVDYLV---------------DGTLHHPHGDH------CD-----------EHVIGLSDTNPDGCHPVHS---CGGHVHGPGCGHEAIQHGDHVDYIVDGRLHH 96
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: A0A7X8TN54_9VIBR (Uncharacterized protein n=1 Tax=Vibrio agarilyticus TaxID=2726741 RepID=A0A7X8TN54_9VIBR)

HSP 1 Score: 67.8 bits (164), Expect = 8.090e-10
Identity = 46/145 (31.72%), Postives = 62/145 (42.76%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQ--PRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHPIGAEDGSGEVHAFEDHGAIRAL 1682
            H+HG +CGH A+ H  HVD+L                +G + H   DH      C     E +            +  D   PEQ  P G     +HGP CGH+ I H  HIDY+V+GRL HP G          ++DHG +  +
Sbjct:   17 HVHGPNCGHTAIQHGDHVDYLV---------------DGVLHHPHGDH------CD----EHV------------IAIDAKNPEQCSPVGKADEHIHGPGCGHEAIKHGDHIDYIVDGRLHHPHGDH--------YDDHGPVELV 116
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: A0A2E8A7S4_9BACT (Uncharacterized protein (Fragment) n=1 Tax=Opitutae bacterium TaxID=2026771 RepID=A0A2E8A7S4_9BACT)

HSP 1 Score: 66.6 bits (161), Expect = 1.850e-9
Identity = 47/143 (32.87%), Postives = 63/143 (44.06%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHPIGAEDGSGEVHAFEDHGAIRAL 1682
            H HG  CGH A+ H+ H+D+L+  G L    G+ +  E    H +                      E T  + DV   G    Q + H  G +HGP CGH+ I H  HIDY+V GRL HP G           +DHG I+ +
Sbjct:   11 HKHGKDCGHTAIQHNGHIDYLHD-GHLHHPCGENQVEE----HVI----------------------EVTDINPDVCTPGL---QCQCHETGHVHGPGCGHEAIPHGDHIDYIVEGRLHHPHGDH--------CDDHGPIQLV 115
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: A0A380MVT5_9GAMM (Uncharacterized protein n=1 Tax=Suttonella indologenes TaxID=13276 RepID=A0A380MVT5_9GAMM)

HSP 1 Score: 67.0 bits (162), Expect = 2.330e-9
Identity = 41/121 (33.88%), Postives = 53/121 (43.80%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHP 1616
            H+HG  CGH A+ H  HVD+L                   V+    D       C C    V G      A + D H + A+    R H    +HGP CGH+ + H  H+DY+VNGRL HP
Sbjct:   11 HVHGKDCGHTAIQHGDHVDYLXXXXXXXXXXXXXXEHYLEVNAQNPDQCTAMKDCGC----VAGCDXXCEAGNCDCHQN-AQGCHDREH----VHGPNCGHEAVPHGDHVDYLVNGRLHHP 122
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: UPI00197BFA9B (hypothetical protein n=1 Tax=Pirellula sp. SH-Sr6A TaxID=1632865 RepID=UPI00197BFA9B)

HSP 1 Score: 66.2 bits (160), Expect = 2.590e-9
Identity = 41/121 (33.88%), Postives = 52/121 (42.98%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLHP 1616
            H HGA CGH A+ H+ HVD+L+ G                  H    H   G GC           + S + SD    D        GH    +HGP CGH+ + H  HIDY+V+G L HP
Sbjct:   10 HQHGAQCGHTAIKHEDHVDYLHDG------------------HL---HHPAGAGCV---------EEHSLSVSDTNPDDCTGGHTCSGHAADHVHGPGCGHEAVPHGDHIDYLVDGHLHHP 100
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BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Match: Q1ZWE0_PHOAS (Uncharacterized protein n=8 Tax=Photobacterium TaxID=657 RepID=Q1ZWE0_PHOAS)

HSP 1 Score: 65.9 bits (159), Expect = 3.090e-9
Identity = 46/121 (38.02%), Postives = 53/121 (43.80%), Query Frame = 3 
Query: 1254 HMHGASCGHLAVLHDQHVDFLNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKESTAASDDVHWDGARPEQPRGHCQGD-MHGPQCGHDVIHHAGHIDYVVNGRLLH 1613
            H HG  CGH A+ HD HVD+L   G+L   HG              DH      C            E     DD H +    E    H  GD +HGP CGH+ I H  HIDY+VNGRL H
Sbjct:   12 HTHGPDCGHTAIRHDGHVDYLVD-GKLHHPHG--------------DH------CD-----------EHVIEFDDAHPN----ECNHSHACGDHVHGPDCGHEAIQHGDHIDYIVNGRLHH 96
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3185.8579.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A3WYU0_9BRAD1.790e-1132.17Uncharacterized protein n=1 Tax=Nitrobacter sp. Nb... [more]
A0A0K1NBC6_9BURK1.430e-1030.77Uncharacterized protein n=2 Tax=unclassified Ottow... [more]
UPI00138A3A8A2.570e-1032.39hypothetical protein n=2 Tax=Vibrio taketomensis T... [more]
UPI000A05AADA2.710e-1031.25hypothetical protein n=1 Tax=Coraliomargarita akaj... [more]
A0A7Y4E348_9VIBR5.050e-1034.17Uncharacterized protein n=4 Tax=Vibrio TaxID=662 R... [more]
A0A7X8TN54_9VIBR8.090e-1031.72Uncharacterized protein n=1 Tax=Vibrio agarilyticu... [more]
A0A2E8A7S4_9BACT1.850e-932.87Uncharacterized protein (Fragment) n=1 Tax=Opituta... [more]
A0A380MVT5_9GAMM2.330e-933.88Uncharacterized protein n=1 Tax=Suttonella indolog... [more]
UPI00197BFA9B2.590e-933.88hypothetical protein n=1 Tax=Pirellula sp. SH-Sr6A... [more]
Q1ZWE0_PHOAS3.090e-938.02Uncharacterized protein n=8 Tax=Photobacterium Tax... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3185contigH-paniculata_contig3185:3426..8891 -
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeBacteria
Seed ortholog score70.9
Seed ortholog evalue2.2e-09
Seed eggNOG ortholog1121028.ARQE01000007_gene3941
KEGG koko:K21903
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Transcriptional regulator
EggNOG OGs1R07X@1224,2TZ0R@28211,COG0640@1,COG0640@2,COG1108@1,COG1108@2
Ec32 ortholog descriptionC2H2 zinc finger protein
Ec32 orthologEc-14_003990.1
COG Functional cat.KP
Best tax levelAlphaproteobacteria
Best eggNOG OGNA|NA|NA
BRITEko00000,ko03000
Exons4
Model size3249
Cds size1662
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3185.8579.1prot_H-paniculata_contig3185.8579.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3185 4900..8778 -


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929981.6249464-UTR-H-paniculata_contig3185:3425..48991622929981.6249464-UTR-H-paniculata_contig3185:3425..4899Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3185 3426..4899 -
1691481096.5999832-UTR-H-paniculata_contig3185:3425..48991691481096.5999832-UTR-H-paniculata_contig3185:3425..4899Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3185 3426..4899 -
1622929981.6963847-UTR-H-paniculata_contig3185:8778..88911622929981.6963847-UTR-H-paniculata_contig3185:8778..8891Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3185 8779..8891 -
1691481096.6524448-UTR-H-paniculata_contig3185:8778..88911691481096.6524448-UTR-H-paniculata_contig3185:8778..8891Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3185 8779..8891 -


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929981.6413424-CDS-H-paniculata_contig3185:4899..51151622929981.6413424-CDS-H-paniculata_contig3185:4899..5115Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 4900..5115 -
1691481096.6102142-CDS-H-paniculata_contig3185:4899..51151691481096.6102142-CDS-H-paniculata_contig3185:4899..5115Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 4900..5115 -
1622929981.654523-CDS-H-paniculata_contig3185:5678..58821622929981.654523-CDS-H-paniculata_contig3185:5678..5882Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 5679..5882 -
1691481096.6183345-CDS-H-paniculata_contig3185:5678..58821691481096.6183345-CDS-H-paniculata_contig3185:5678..5882Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 5679..5882 -
1622929981.6667461-CDS-H-paniculata_contig3185:6893..79271622929981.6667461-CDS-H-paniculata_contig3185:6893..7927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 6894..7927 -
1691481096.6262915-CDS-H-paniculata_contig3185:6893..79271691481096.6262915-CDS-H-paniculata_contig3185:6893..7927Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 6894..7927 -
1622929981.681112-CDS-H-paniculata_contig3185:8570..87781622929981.681112-CDS-H-paniculata_contig3185:8570..8778Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 8571..8778 -
1691481096.6352928-CDS-H-paniculata_contig3185:8570..87781691481096.6352928-CDS-H-paniculata_contig3185:8570..8778Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3185 8571..8778 -


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3185.8579.1

>prot_H-paniculata_contig3185.8579.1 ID=prot_H-paniculata_contig3185.8579.1|Name=mRNA_H-paniculata_contig3185.8579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=554bp
MAPSSTARSGGQQVNPFKCEHCQREFSTKGNLVRHVQAAHIGGQVFPCQT
CGKEFKRKEDMHTHMRVHTGEKPYACGRGDCERRFARISDLRSHERTHDA
NAKSFVCAYPGCAKSFTRPYDLKKHHLNQHQQGSLRSVARQAGSSSAKPK
ATSATTVKRSIDALDASTTITTTTATPATPKTNWAHWTARPSCLSCPVQQ
GQQAVNSNACGSGVAKSSPDQRHGVGGDQHRTDSTRPSSDHGHPRHQHQH
QESQLDERPNRQHNHRPELTPSHDHALTVSAAFPSSVATTRTKGPPPPPL
FASSATTARANASAPPPLRTTQFRKRIRCDAHRDNVDSQDPPRRRSHQGA
GVAATAAEISHQYTGRAALSAPAGAGASGKHMHGASCGHLAVLHDQHVDF
LNPGGQLECYHGKEKTREGWVSHAVKDHGAVGTGCSCPGGEVIGSGKEST
AASDDVHWDGARPEQPRGHCQGDMHGPQCGHDVIHHAGHIDYVVNGRLLH
PIGAEDGSGEVHAFEDHGAIRALDDDFVTFYETLDVLSENADQAVESFCD
LCE*
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mRNA from alignment at H-paniculata_contig3185:3426..8891-

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3185.8579.1 ID=mRNA_H-paniculata_contig3185.8579.1|Name=mRNA_H-paniculata_contig3185.8579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5466bp|location=Sequence derived from alignment at H-paniculata_contig3185:3426..8891- (Halopteris paniculata Hal_grac_a_UBK monoicous)
TTCGGATAGATATACAACACATACGTGTTTCTTGGGGCTGTAGTATCTGT
GCACTTGCATGGCAATACAGTTTAACGTTCTCTACGCCTGCAACCGTGCC
CGCGTAGTGAAACATGGCGCCGTCCTCCACGGCGAGGAGCGGAGGCCAGC
AGGTGAACCCATTCAAGTGCGAGCACTGCCAGAGGGAGTTCAGCACCAAG
GGAAACCTGGTGAGGCACGTCCAAGCTGCCCACATTGGCGGGCAGGTTTT
TCCCTGCCAGACGTGCGGGAAAGAATTCAAGCGGAAAGAAGACATGCATA
CACATATGCGTGTTCACACCGGTGAGAGAGAACTAGACAGAGGTGGAGAG
GAATAAGAGAGAGAAACAGAAGAGAGAGAGAGAGCCAAGATGGTCGTTCG
GAAAATGGTCGGTCCTAACATAGCACAGCTTGGCAACTTTCTGTACACAG
AGACATCGAGATGCCCACAACACTAGTAGTACTACGGTTCTTTAGTGTTT
GAAAAAAGGTGGGGATAATGTGGAGATGCCCTTGAGACTAGACAAATGGA
AATGTTTGCCCTTACTACCACTGTATTGTTCAGCTTGGCAATATGGCAAG
CCGACAACTAAAGTTTACTCTGTAGACATACCATCATCTATCTTGAAGAT
GCACGACAGCCTTGTTCAACTCTGCTATTTCTTAATGGTTGCTCGCTTAT
ACCTCGTCTTATACATGGCAAGTTGACATAGGGGTCAACGACGTCGCGAA
ACTGCAACCATGAAAGGCTGTTATACTAATTGATCCATTATGTACTGTCC
AAATCAATCAATGCCCTTGTGCTAGTCCGGCAGGTAGAATTATTCGTTGG
CCGTTTGTTTTTGCTTGGTTGTTACTTACGACTATCCATGATATAATATG
TGGAAATGAAGTTCTACAATACCAAAATGTACTTATAGTATCCATCCCTT
CGGTCTTGAGGCAGGCGAAAAGCCGTACGCGTGCGGACGTGGAGATTGCG
AGAGGAGATTCGCTCGGATCTCGGACCTCAGGAGCCACGAGCGAACGCAC
GATGCGAACGCCAAATCGTTCGTGTGCGCGTACCCGGGCTGTGCTAAGAG
TTTCACGCGTCCGTACGACCTCAAGAAGCACCACCTCAACCAGCACCAGC
AGGGCTCGCTGAGAAGTGTAGCAAGGCAAGCCGGCAGTTCTTCCGCAAAG
CCAAAGGCAACATCAGCAACGACCGTGAAACGATCAATCGATGCGTTGGA
CGCTAGCACAACAATCACCACGACCACCGCCACCCCCGCCACACCAAAAA
CCAACTGGGCCCATTGGACTGCGAGACCGAGTTGCCTATCCTGTCCGGTG
CAACAAGGGCAGCAGGCGGTGAACAGCAATGCCTGCGGCAGTGGCGTGGC
TAAGAGCTCTCCCGACCAGCGCCACGGAGTAGGAGGAGATCAGCATCGCA
CCGATAGTACCAGACCTTCCAGCGATCATGGTCATCCACGCCATCAACAT
CAACACCAAGAATCCCAACTCGACGAACGACCAAATCGTCAACACAATCA
CCGTCCAGAGTTGACTCCATCACATGACCATGCCTTAACGGTTAGCGCAG
CGTTCCCATCATCAGTTGCAACCACCAGAACGAAAGGACCACCGCCGCCG
CCCTTGTTCGCATCATCAGCTACAACAGCCAGGGCGAACGCATCTGCGCC
ACCGCCGCTGCGAACTACTCAATTCCGCAAACGCATCCGTTGCGACGCAC
ACAGGGATAACGTGGACTCGCAGGATCCCCCTCGCCGCCGCTCCCATCAG
GGTGCGGGGGTAGCTGCGACGGCGGCGGAGATAAGCCACCAATACACTGG
GCGTGCTGCGCTGTCGGCGCCCGCCGGTGCTGGCGCCAGCGGCAAGCACA
TGCACGGGGCGAGCTGCGGGCACCTCGCCGTGCTTCACGACCAGCACGTG
GACTTTCTTAATCCAGGGGGGCAGCTGGAGTGCTACCATGGGAAGGAGGT
GTGTGCGTTGTGTGTGCGGCGTGTGTGTGTATATATTTCTGTGCGTTTTT
TTTTAATACATAATTGTGCGACAGGCTAGTTTACATCCTGTATATGGGAT
AGAAGTGCTAGGTTGGTCGTTCATAGATTGGCGTCGAGGTTTTTTCTTTG
AAACGTCAGCGGACGGCAAATGCCGAAACTCACCTCACAGAGCAACAATC
GGAGAAGACTATTTTACATAATATACCGACACTCTATGGCGTGGGTTGTG
CGAAGTTGAGCGCACTGCGTGGACCATAGCTGTCGCGCTTCCCATGTTGA
TAGCATAACAGTTGGCGACGCAGATCTAGCTCCATATAATTCATGACTTC
AGTTTTCGATGGAGCTAAAACAGCGTCGCCAAATTATACCGTGTCTCCAA
CATTGCAAGTGTAACGATTGTGTTTCATGCTTTGCGCTAAAACTTCGCAC
AATCCATGCCAGACTTTCGGTATGTTGCTGTAATACCATTTGATATCGCA
CCGGGTGCGAAACGAAATTAAATTTATCCATGGCAGGTCGCACGATGTGA
CATCACAGGGTATTGCGACCTGAAAAGTAATCTGTTCCCATGGTCGCTTT
GTGAGGCGAGTTTTGACGCCGTCTGCTTTGGCTAAAAAAACAACACCGTT
CGCCCTCAATAAGGGCTCATGGCCCCCCCTACCCTCTTTTCTTCAAACCC
AACAAATCAAGAAAAAGAAATTACGATACTAATAACAAACGGCCTTTTAT
CATGGGCGTCGAAAACTTATTTCTGATGCTTCGGATCAAGGAAAAAGAAA
AAGAGCAGAATTGCGGTGATGGGCCCCCTTTTTGGGTGTACAGTATTTTT
GGAGTCCAAGCAGAAAGCAGGGTCGAAGGTTTCGCTGCGCTCTGCCTCGT
CATGACCCTTCCCCACCCGATGTTATCACATTTGTCTTGCTTGATCCCTC
CTCCCCGTCCCTACGGTACGCTGACGCACAAACCGGTGCCGCCTTCGCTA
TCCACCCAGAAAACTCGTGAAGGCTGGGTGAGCCATGCCGTCAAGGACCA
CGGCGCCGTTGGCACTGGCTGTAGCTGCCCTGGCGGCGAGGTAATTGGGT
CCGGAAAGGAGTCGACTGCGGCGTCGGACGATGTTCACTGGGATGGTGCG
CGGCCTGAGCAGCCCAGGGGGCACTGCCAGGGGGACATGCATGGGCCGCA
GTGCGGACACGACGTGAGTTGGGCGGATGCGCCTGGGAAGAAGTTGACGG
CAGCTCGTGTTGTTGTTGTTATTGTTTCGTTAGGCGCGGAGGATGACCTG
AATTCGCTTTACTAGTCTCACTGTACTGGGTTGAGGGGTCGTTGGTTTCT
CTACAAACTTGAATGACATGTAGTAGTACACCAAAACTAATGGGTATCGC
TGGAAAAGGTCACGGCACAACCTGTCCATATCGCACTAGTTCAACGCGCT
ACAGCCAGCTCGAAAACCACAGCGCGCAACTGCCCACAGGATTTCCTCAA
GACGCTCATCTAATCGTGTGCATGGGGAAATATTACTTGACTAGAGATAC
AGGGGAATCATGTGCTGAGCAGTCCCGCTGCCATGCATGTATATATTTAT
ATAAATGTACTGTGTCATACTCCCCATGATGCGCTTGCGCCATGCGAACA
CCCACCGCCGTTGCTTGTGCCGTTTTAGGGTATGCGAAGTCGATGTTCTA
TTACTGTCGTATACGTTTTCATAGGGTTCCCCATGCCACACACATGTTCC
TGTTTTTCCTTGTGCGGTTACCCCAGGTTATACATCATGCGGGGCATATT
GACTACGTGGTGAACGGTCGACTACTTCACCCGATCGGTGCCGAGGACGG
AAGCGGCGAAGTCCATGCGTTCGAAGACCACGGTGCGATCCGAGCGCTGG
ATGATGACTTCGTGACGTTTTATGAAACGCTTGATGTTCTAAGCGAAAAC
GCGGATCAGGCTGTGGAATCGTTCTGCGACTTGTGTGAATGACAACGCTT
TGACGAGCGAGAACTGGTCGCTGTGGTTGCTCTCTTGTTAGGCGTGCGAG
CATGGTGAGCTACAACAGATTGTAATATTCGTTTGGAGCAAGCGCTCTCT
CCACCCACCTTTGTTCGCGCACTCTTTTTTTAGTAGGTGTTGCTTTTGTT
GTTGTTGTTGTTGTTTTAGGTACTTGCGTTCTTGTGCCGTCTGTTTTATT
ATATATACCATACAAACAGGAAAGGTTATTTGTCGTGATTTGGCGTACTG
CCGAGCTGAAGTAGACTAAAGCGATACTGGCACGGAGCTGGAATTTTTTT
CCCGCGTCCACCTTTGAAATGTTTCGGGATGCACGTGTGCGATATTCGTC
TCAGTAGCGTAGCTCTAGGTACTTTATTAGTCAAGGCCTTATGAGACTCC
GTTGCATGGGGGAAAACCTCAGCGTCACCGCATGTCACTCCTCTTGAGTA
CGCGTGTGAGAGTCGCGTTTTAGGGTTGTGTATGCGCATATAAATATGTA
TGATGACTTCGGGCCGATCATTCTCCGGAGGTCTATTGTTATGGTGCGCT
GTCTGTCTTGTGTTTTCTGTCTGACTGTGGTGGTCGTCCATGGTGTTTCC
TCACAATTTGGGTGTCGTTATGATTTTGGCTTACTTTGAAAGGGAAAGAA
TCGCGTACTTGCGTGCAGCCCAAGTTTGTTGCCTGGTCCCCCCCCTCCCC
TCCTTGTGTGCCGCCATTTCGGCCCAGTTTCGATTTTTCGCTGATGGAAA
AAAAATCCATTTTGCCGTGTCACAACTCGCAACATTGTGGTAAAATATAG
TACAGAGGGGGGGGGGGGGGGGTCAGTGTGTAGAGTAAATGGGAAGGTAG
TGAAGCACTCTCGCGTGCGGGTTGGGCATGGTGCCAGTTCAAGGGAGAGT
AGCAGGTCTGCAGACGTGGAAATCGACATTATTTGAATTTTAGAATGTTC
GCCCTTCGGTTTATATACTAGTAACGGTTTTAGGAAATATGCATGGATGT
GGTTCGCTCTAACGCGTACGTCAGAGCTGCATGCATTATTTTCAAACCTT
CGCTGAAAGTGTATACTGGGTTAAGGAAAGTGTTCTTACCCTCATATCGT
TGTGGCAAGTTGCCTCTTTCCACCCCTTCGAACGTGCCTTTTCATTTTGG
ATCTGTGCCGCAGATAAAGTTGCATATTGAAATCCAGTACTGAAATTAGC
GTTCAACCGTTCATGTGCGGATCGTGCGCGTCGGTTGGTTGGGTTGTTTG
ATTAGCAAGCGAGTTGTGGTACATTGCTTTGTGGGTGAATACTTTTATAC
GCCATATGACCTGCCGTGCCGTGGATGCGGAGGTATAGGTACTACGAGCG
CCCGAAACGGATGAAGGATAATAATGTCGTTTGCCTAAAATGTCATCTAT
ATATTGTGCGTCGTGACACCGTGCTATGGACGCGGATGTGCTGTAAGCTT
TTTCAGAATAAAGGGA
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Coding sequence (CDS) from alignment at H-paniculata_contig3185:3426..8891-

>mRNA_H-paniculata_contig3185.8579.1 ID=mRNA_H-paniculata_contig3185.8579.1|Name=mRNA_H-paniculata_contig3185.8579.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=3324bp|location=Sequence derived from alignment at H-paniculata_contig3185:3426..8891- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGCGCCGTCCTCCACGGCGAGGAGCGGAGGCCAGCAGGTGAACCCATT
CAAGTGCGAGCACTGCCAGAGGGAGTTCAGCACCAAGGGAAACCTGGTGA
GGCACGTCCAAGCTGCCCACATTGGCGGGCAGGTTTTTCCCTGCCAGACG
TGCGGGAAAGAATTCAAGCGGAAAGAAGACATGCATACACATATGCGTGT
TCACACCGATGGCGCCGTCCTCCACGGCGAGGAGCGGAGGCCAGCAGGTG
AACCCATTCAAGTGCGAGCACTGCCAGAGGGAGTTCAGCACCAAGGGAAA
CCTGGTGAGGCACGTCCAAGCTGCCCACATTGGCGGGCAGGTTTTTCCCT
GCCAGACGTGCGGGAAAGAATTCAAGCGGAAAGAAGACATGCATACACAT
ATGCGTGTTCACACCGGCGAAAAGCCGTACGCGTGCGGACGTGGAGATTG
CGAGAGGAGATTCGCTCGGATCTCGGACCTCAGGAGCCACGAGCGAACGC
ACGATGCGAACGCCAAATCGTTCGTGTGCGCGTACCCGGGCTGTGCTAAG
AGTTTCACGCGTCCGTACGACCTCAAGAAGCACCACCTCAACCAGCACCA
GCAGGGCTCGCTGAGAAGTGTAGCAAGGCAAGCCGGCAGTTCTTCCGCAA
AGCCAAAGGCAACATCAGCAACGACCGTGAAACGATCAATCGATGCGTTG
GACGCTAGCACAACAATCACCACGACCACCGCCACCCCCGCCACACCAAA
AACCAACTGGGCCCATTGGACTGCGAGACCGAGTTGCCTATCCTGTCCGG
TGCAACAAGGGCAGCAGGCGGTGAACAGCAATGCCTGCGGCAGTGGCGTG
GCTAAGAGCTCTCCCGACCAGCGCCACGGAGTAGGAGGAGATCAGCATCG
CACCGATAGTACCAGACCTTCCAGCGATCATGGTCATCCACGCCATCAAC
ATCAACACCAAGAATCCCAACTCGACGAACGACCAAATCGTCAACACAAT
CACCGTCCAGAGTTGACTCCATCACATGACCATGCCTTAACGGTTAGCGC
AGCGTTCCCATCATCAGTTGCAACCACCAGAACGAAAGGACCACCGCCGC
CGCCCTTGTTCGCATCATCAGCTACAACAGCCAGGGCGAACGCATCTGCG
CCACCGCCGCTGCGAACTACTCAATTCCGCAAACGCATCCGTTGCGACGC
ACACAGGGATAACGTGGACTCGCAGGATCCCCCTCGCCGCCGCTCCCATC
AGGGTGCGGGGGTAGCTGCGACGGCGGCGGAGATAAGCCACCAATACACT
GGGCGTGCTGCGCTGTCGGCGCCCGCCGGTGCTGGCGCCAGCGGCAAGCA
CATGCACGGGGCGAGCTGCGGGCACCTCGCCGTGCTTCACGACCAGCACG
TGGACTTTCTTAATCCAGGGGGGCAGCTGGAGTGCTACCATGGGAAGGAG
GCGAAAAGCCGTACGCGTGCGGACGTGGAGATTGCGAGAGGAGATTCGCT
CGGATCTCGGACCTCAGGAGCCACGAGCGAACGCACGATGCGAACGCCAA
ATCGTTCGTGTGCGCGTACCCGGGCTGTGCTAAGAGTTTCACGCGTCCGT
ACGACCTCAAGAAGCACCACCTCAACCAGCACCAGCAGGGCTCGCTGAGA
AGTGTAGCAAGGCAAGCCGGCAGTTCTTCCGCAAAGCCAAAGGCAACATC
AGCAACGACCGTGAAACGATCAATCGATGCGTTGGACGCTAGCACAACAA
TCACCACGACCACCGCCACCCCCGCCACACCAAAAACCAACTGGGCCCAT
TGGACTGCGAGACCGAGTTGCCTATCCTGTCCGGTGCAACAAGGGCAGCA
GGCGGTGAACAGCAATGCCTGCGGCAGTGGCGTGGCTAAGAGCTCTCCCG
ACCAGCGCCACGGAGTAGGAGGAGATCAGCATCGCACCGATAGTACCAGA
CCTTCCAGCGATCATGGTCATCCACGCCATCAACATCAACACCAAGAATC
CCAACTCGACGAACGACCAAATCGTCAACACAATCACCGTCCAGAGTTGA
CTCCATCACATGACCATGCCTTAACGGTTAGCGCAGCGTTCCCATCATCA
GTTGCAACCACCAGAACGAAAGGACCACCGCCGCCGCCCTTGTTCGCATC
ATCAGCTACAACAGCCAGGGCGAACGCATCTGCGCCACCGCCGCTGCGAA
CTACTCAATTCCGCAAACGCATCCGTTGCGACGCACACAGGGATAACGTG
GACTCGCAGGATCCCCCTCGCCGCCGCTCCCATCAGGGTGCGGGGGTAGC
TGCGACGGCGGCGGAGATAAGCCACCAATACACTGGGCGTGCTGCGCTGT
CGGCGCCCGCCGGTGCTGGCGCCAGCGGCAAGCACATGCACGGGGCGAGC
TGCGGGCACCTCGCCGTGCTTCACGACCAGCACGTGGACTTTCTTAATCC
AGGGGGGCAGCTGGAGTGCTACCATGGGAAGGAGAAAACTCGTGAAGGCT
GGGTGAGCCATGCCGTCAAGGACCACGGCGCCGTTGGCACTGGCTGTAGC
TGCCCTGGCGGCGAGGTAATTGGGTCCGGAAAGGAGTCGACTGCGGCGTC
GGACGATGTTCACTGGGATGGTGCGCGGCCTGAGCAGCCCAGGGGGCACT
GCCAGGGGGACATGCATGGGCCGCAGTGCGGACACGACAAAACTCGTGAA
GGCTGGGTGAGCCATGCCGTCAAGGACCACGGCGCCGTTGGCACTGGCTG
TAGCTGCCCTGGCGGCGAGGTAATTGGGTCCGGAAAGGAGTCGACTGCGG
CGTCGGACGATGTTCACTGGGATGGTGCGCGGCCTGAGCAGCCCAGGGGG
CACTGCCAGGGGGACATGCATGGGCCGCAGTGCGGACACGACGTTATACA
TCATGCGGGGCATATTGACTACGTGGTGAACGGTCGACTACTTCACCCGA
TCGGTGCCGAGGACGGAAGCGGCGAAGTCCATGCGTTCGAAGACCACGGT
GCGATCCGAGCGCTGGATGATGACTTCGTGACGTTTTATGAAACGCTTGA
TGTTCTAAGCGAAAACGCGGATCAGGCTGTGGAATCGTTCTGCGACTTGT
GTGAATGAGTTATACATCATGCGGGGCATATTGACTACGTGGTGAACGGT
CGACTACTTCACCCGATCGGTGCCGAGGACGGAAGCGGCGAAGTCCATGC
GTTCGAAGACCACGGTGCGATCCGAGCGCTGGATGATGACTTCGTGACGT
TTTATGAAACGCTTGATGTTCTAAGCGAAAACGCGGATCAGGCTGTGGAA
TCGTTCTGCGACTTGTGTGAATGA
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