mRNA_H-paniculata_contig3184.8576.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A6H5JJ68_9PHAE (Ion_trans domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JJ68_9PHAE) HSP 1 Score: 269 bits (688), Expect = 2.920e-85 Identity = 165/223 (73.99%), Postives = 178/223 (79.82%), Query Frame = 1
Query: 1 KEAVFKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVKNSFEV 669
KEAVFKA GKTFKYAKTSLY+FDELNP RVACVKTIAHPWFDRFILFLI+LNS VLALTDWSVI+++P S VG+PI +GSWRN LLF+SE VFT FFT+EFVLKV+AQGF+ GRGSYLRDSWNILDFMVVVTAL+TSIP MXXXXXXXXXXXXXXXXXXXXXXXX IQIFAGKQHSRCRLTP+PV NSFEV
Sbjct: 24 KEAVFKACGKTFKYAKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXQKLVVGMLRSVPQLVSVVILLQFIFTVFGIFGIQIFAGKQHSRCRLTPFPVNNSFEV 246
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: D7FVE6_ECTSI (Voltage Gated Calcium/Sodium Channel subunit alpha n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FVE6_ECTSI) HSP 1 Score: 269 bits (688), Expect = 1.700e-79 Identity = 197/223 (88.34%), Postives = 210/223 (94.17%), Query Frame = 1
Query: 1 KEAVFKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVKNSFEV 669
KEAVFKA GKTFKYAKTSLY+FDELNP RVACVKTIAHPWFDRFILFLI+LNS VLALTDWSVI+++P S VG+PI +GSWRN LLF+SE VFT FFT+EFVLKV+AQGF+ GRGSYLRDSWNILDFMVVVTAL+TSIP MXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTP+PV NSFEV
Sbjct: 24 KEAVFKACGKTFKYAKTSLYVFDELNPVRVACVKTIAHPWFDRFILFLIVLNSFVLALTDWSVIDDDPNSPDVGEPIDDGSWRNALLFESEAVFTAFFTLEFVLKVIAQGFYLGRGSYLRDSWNILDFMVVVTALMTSIPGMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPFPVNNSFEV 246
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: D8LI94_ECTSI (Ion_trans domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI94_ECTSI) HSP 1 Score: 218 bits (556), Expect = 1.930e-68 Identity = 131/222 (59.01%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 1 KEAVFKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVKNSFE 666
KEAVF GK Y ++SLY+F E + RVACVK +AHPWFDRFIL +I LNS+VLALTDW+ I+E+P SE VG+PI EGSWRN LL+++E +FT FT+EFVLKVV+QGF G G+YLRD+WN+LDF+VVVTALLTSIP M XXXXXXXXXXXXXXXX IQ+FAGKQHSRCRLTPYPV +FE
Sbjct: 3 KEAVFDFHGKHLVYPRSSLYLFSEKSRVRVACVKLVAHPWFDRFILLVIALNSIVLALTDWTRIDEDPSSEDVGEPIAEGSWRNTLLYETEGIFTAIFTLEFVLKVVSQGFIFGHGAYLRDAWNVLDFVVVVTALLTSIPGMPTATAIRVXXXXXXXXXXXXXXXXQHLVVSMLKSVPQLVSVLILLQFIFVVFGILGIQLFAGKQHSRCRLTPYPVTTAFE 224
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A6H5KPD7_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KPD7_9PHAE) HSP 1 Score: 213 bits (542), Expect = 6.750e-60 Identity = 129/222 (58.11%), Postives = 154/222 (69.37%), Query Frame = 1
Query: 4 EAVFKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVKNSFEV 669
EAV+ +GK Y K+SLY+F E + RVA VK +AHPWFDRFIL +I LNS+VLALTDW+ I+E+P SE VG+PI EGSWRN LL+++E +FT FT+EFVLKVV+QGF G G+YLRD+WN+LDF+VVVTA+LTSIP M XXXXXXXXXXXXXXXXX IQ+FAGKQHSRCRLTPYPV +FE
Sbjct: 25 EAVYDFYGKHLVYPKSSLYLFSEKSRVRVAFVKLVAHPWFDRFILLVIALNSIVLALTDWTRIDEDPSSEHVGEPIAEGSWRNTLLYETESMFTAIFTLEFVLKVVSQGFIFGHGAYLRDAWNVLDFVVVVTAVLTSIPGMPTATAIRXXXXXXXXXXXXXXXXXQHLVVSMLKSVPQLVSVLILLQFIFVVFGILGIQLFAGKQHSRCRLTPYPVTTAFET 246
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A7S1G9I4_9STRA (Hypothetical protein (Fragment) n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1G9I4_9STRA) HSP 1 Score: 125 bits (315), Expect = 8.330e-30 Identity = 77/214 (35.98%), Postives = 106/214 (49.53%), Query Frame = 1
Query: 13 FKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVK 654
F A GK +++ SLY+F NP R V I +FDRFIL LI+ NS+VLALTD+S + P+ ++ SWRN ++ ++EI FT F E LK++A GFF GSYLRD WNI+DF+VV+T +LT++P M IQI+ G H+RCR+TPYP++
Sbjct: 15 FFAHGKARRFSPKSLYLFSTTNPIRKRIVWLIEWKYFDRFILMLIIANSIVLALTDYSSVL--PDGT-----LSMSSWRNQVVEETEIYFTTLFAAECSLKIIAMGFFVDIGSYLRDGWNIMDFVVVMTGVLTTVPGMPNVSAFRTVRVLRPLRSLTVVPGMRLLVTSLLRSIPALLNVVALLLFVFAIFGILGIQIWQGLLHARCRMTPYPIQ 221
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A5A8CCH9_CAFRO (Ion_trans domain-containing protein n=4 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8CCH9_CAFRO) HSP 1 Score: 110 bits (276), Expect = 2.670e-24 Identity = 94/217 (43.32%), Postives = 114/217 (52.53%), Query Frame = 1
Query: 4 EAVFKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVK 654
E F A GKTF +A SL +FDE + R V + WFDR +L LIL NS+ LA+TD+S +P + P S RN + E VF FT+E VLK+VA GF GSYLR WN+LDF+VV +ALL++IP XXXXXXXXXXXXXXXXX +FAG RCRLTPYPV+
Sbjct: 53 EVNFVAHGKTFMFAPRSLGLFDETSSIRQLAVWLVTWSWFDRLVLLLILANSVTLAITDYSATAVDPVTML---PDPGRSPRNAIGEALEPVFLWSFTVEMVLKIVAMGFALSPGSYLRSGWNVLDFIVVASALLSAIPGXXXXXXXXXXXXXXXXXXLTVLPGMRVLVGSLLASLPELASVGVLLGFVFLLFGILAQNLFAGLLPRRCRLTPYPVE 266
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A8K1CRX9_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CRX9_PYTOL) HSP 1 Score: 110 bits (276), Expect = 2.880e-24 Identity = 121/214 (56.54%), Postives = 154/214 (71.96%), Query Frame = 1
Query: 13 FKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVK 654
F A GK F +A SL +FDE N FR A + I FD+FIL LI NS++L+L D+S +++N + ++ S RN ++ +++ +FTIFF++E +K++A G RG+YL D WN LDF+VV +L IP XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +Q+++G H RCRLTPYPV+
Sbjct: 79 FYAHGKRFLFAPCSLGVFDESNRFRQAIIWCITWKRFDQFILLLIFANSIILSLADYSKVDKNGDLDS------STSIRNAIVNRADRIFTIFFSIECSMKIIAMGLIGERGAYLMDPWNWLDFVVVFFGILAVIPGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVIGVQLWSGVLHPRCRLTPYPVR 286
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A2D4C6S1_PYTIN (Uncharacterized protein n=1 Tax=Pythium insidiosum TaxID=114742 RepID=A0A2D4C6S1_PYTIN) HSP 1 Score: 110 bits (276), Expect = 2.890e-24 Identity = 108/214 (50.47%), Postives = 140/214 (65.42%), Query Frame = 1
Query: 13 FKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALLTSIPEMXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIQIFAGKQHSRCRLTPYPVK 654
F A GK F +A SL +F E + FR V I FD+FILFLI NS++LA+ D+S ++E+ + ++ S+RN ++ ++ +FT FT+E LK++A G F +G+YL D WN LDF VV LL +IP +XXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXX +Q+++G HSRCRLTPYPV+
Sbjct: 84 FYAHGKRFLFAPLSLGLFPESSRFRQLVVWCITSKRFDQFILFLIFANSIILAIADYSKVDEHGDLDS------SRSYRNAVVNYADSIFTALFTVECSLKIIAMGMFGEKGAYLMDPWNGLDFAVVFVGLLATIPGIXXXXXXXXXXXXXXXXXXXXXXXXKKLINALLKSIPELXXXXXXXXXXXXXXGVIGVQLWSGVLHSRCRLTPYPVR 291
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A7S0PH88_CAFRO (Hypothetical protein (Fragment) n=1 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A7S0PH88_CAFRO) HSP 1 Score: 107 bits (268), Expect = 1.950e-23 Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 13 FKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALL 408
F K K+AK SL+ DE + FR + V IAHP F+ IL LI+ NS+VLA+T++S + N + +T P N + +SE+VFT F +E VLK++A GF RG+YLRD WN+LDF+VV+ LL
Sbjct: 73 FAVHDKKLKFAKNSLFCLDESSSFRWSVVWLIAHPVFELVILLLIIANSIVLAMTNYSEVTANGQLDT-SDPF------NRAVDESELVFTTLFAIEMVLKIIAMGFVLERGAYLRDPWNVLDFIVVMAGLL 197
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Match: A0A5A8D5B1_CAFRO (Uncharacterized protein n=5 Tax=Cafeteria roenbergensis TaxID=33653 RepID=A0A5A8D5B1_CAFRO) HSP 1 Score: 107 bits (268), Expect = 3.480e-23 Identity = 60/132 (45.45%), Postives = 83/132 (62.88%), Query Frame = 1
Query: 13 FKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILLNSLVLALTDWSVINENPESETVGQPITEGSWRNLLLFKSEIVFTIFFTMEFVLKVVAQGFFRGRGSYLRDSWNILDFMVVVTALL 408
F K K+AK SL+ DE + FR + V IAHP F+ IL LI+ NS+VLA+T++S + N + +T P N + +SE+VFT F +E VLK++A GF RG+YLRD WN+LDF+VV+ LL
Sbjct: 37 FAVHDKKLKFAKNSLFCLDESSSFRWSVVWLIAHPVFELVILLLIIANSIVLAMTNYSEVTANGQLDT-SDPF------NRAVDESELVFTTLFAIEMVLKIIAMGFVLERGAYLRDPWNVLDFIVVMAGLL 161 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3184.8576.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3184.8576.1 >prot_H-paniculata_contig3184.8576.1 ID=prot_H-paniculata_contig3184.8576.1|Name=mRNA_H-paniculata_contig3184.8576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=227bp KEAVFKAFGKTFKYAKTSLYIFDELNPFRVACVKTIAHPWFDRFILFLILback to top mRNA from alignment at H-paniculata_contig3184:907..1587- Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3184.8576.1 ID=mRNA_H-paniculata_contig3184.8576.1|Name=mRNA_H-paniculata_contig3184.8576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=681bp|location=Sequence derived from alignment at H-paniculata_contig3184:907..1587- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3184:907..1587- >mRNA_H-paniculata_contig3184.8576.1 ID=mRNA_H-paniculata_contig3184.8576.1|Name=mRNA_H-paniculata_contig3184.8576.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1362bp|location=Sequence derived from alignment at H-paniculata_contig3184:907..1587- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |