mRNA_H-paniculata_contig31737.8548.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: D8LTP0_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D8LTP0_ECTSI) HSP 1 Score: 231 bits (589), Expect = 9.040e-68 Identity = 114/141 (80.85%), Postives = 127/141 (90.07%), Query Frame = 1
Query: 1 QVRLDGYEPHSSIPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTLRAEEPGE 423
QVRLDG+EP+SSIPVNSDD+AVPFETPLFKGRLL+RVAGLP D +Q+YFRGKKRLMQCAVQG FK+EL FDR YTGQAY RPFTQLPAKWLIRSAF++IRRLSPALREDITG+ PYMVSPLAATAQ++RAE PG+
Sbjct: 950 QVRLDGHEPNSSIPVNSDDIAVPFETPLFKGRLLVRVAGLP------GDGAQDYFRGKKRLMQCAVQGEFKKELPFDRVYTGQAYDRPFTQLPAKWLIRSAFSLIRRLSPALREDITGERPYMVSPLAATAQSMRAEAPGD 1084
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A7S4CGR5_9EUGL (Hypothetical protein (Fragment) n=1 Tax=Eutreptiella gymnastica TaxID=73025 RepID=A0A7S4CGR5_9EUGL) HSP 1 Score: 111 bits (278), Expect = 1.600e-27 Identity = 57/130 (43.85%), Postives = 81/130 (62.31%), Query Frame = 1
Query: 34 SIPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTLRAEEPGE 423
++ VNS + FET +FKG + +R+ P +YF+GK R +Q AVQG FK+EL D +TG+ +P LP KW++ +A V+R+LSP +RED+ GD PY++S LAATAQ LR + GE
Sbjct: 104 ALQVNSA-TPIHFETAIFKGCMQVRIKDCP------GAPQTDYFQGKARTIQMAVQGQFKKELPMDTVFTGEEQHQPLANLPPKWVVSTALGVVRKLSPGMREDVQGDRPYVLSFLAATAQALRCDASGE 226
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A7S2WDF6_9STRA (Hypothetical protein n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WDF6_9STRA) HSP 1 Score: 107 bits (268), Expect = 1.940e-24 Identity = 53/138 (38.41%), Postives = 83/138 (60.14%), Query Frame = 1
Query: 1 QVRLDGYEPHSSIPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIR-RLSPALREDITGDNPYMVSPLAATAQTLRAE 411
++ + G + ++P+N +PFETPLFKG +IR+A LP + +YF K+R MQ A+QG FKR L FD ++GQ V+P +P +W+I+ A +++R RL + D + PY +SPL +T+Q RA+
Sbjct: 725 EILVPGKSAYGALPINDRRTPIPFETPLFKGVAMIRIADLP-------SSPTDYFYRKRRKMQVAIQGKFKRPLTFDNVFSGQELVKPLRNIPGRWMIKWALSLLRSRLPNTFKCDAFQEQPYFLSPLISTSQCFRAD 855
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A7S3Y031_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y031_HETAK) HSP 1 Score: 99.8 bits (247), Expect = 3.530e-23 Identity = 47/95 (49.47%), Postives = 66/95 (69.47%), Query Frame = 1
Query: 136 GQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTLRAEEPG 420
G A +YFRG+ R Q AVQG FK +A TGQAY RPF +LPA+WL+R+AF +I++++P L+E+I+G P ++SPL AT+Q + E PG
Sbjct: 2 GAGAADDDYFRGRSRRFQVAVQGEFKVPVAAAALATGQAYRRPFRRLPARWLVRAAFVLIKKIAPTLKEEISGPFPTLLSPLLATSQAVLVERPG 96
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: K8EQ44_9CHLO (Uncharacterized protein n=1 Tax=Bathycoccus prasinos TaxID=41875 RepID=K8EQ44_9CHLO) HSP 1 Score: 99.8 bits (247), Expect = 3.280e-22 Identity = 53/132 (40.15%), Postives = 80/132 (60.61%), Query Frame = 1
Query: 37 IPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQ--SDASQEYFRGKKRLMQCAVQGCFKRE-LAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTLRAEEPGE 423
+P+N D + T F G+LL+R +P R + +D +++YF KKR Q VQG F R+ + TG + F ++PA+WL+ +A VIR+L+P L +ITG+ P++ +PL ATAQ LRA+ PGE
Sbjct: 105 LPIN-DTRGIEIRTNAFAGKLLVRCRDVPSREGDEEGNDVTKKYFANKKRTFQTVVQGRFLRKGIKCSEVVTGHEFESRFRRIPARWLVSTALKVIRKLTPGLEANITGNKPFIYAPLCATAQVLRADVPGE 235
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A7S3XB19_9CHLO (Hypothetical protein n=1 Tax=Picocystis salinarum TaxID=88271 RepID=A0A7S3XB19_9CHLO) HSP 1 Score: 84.7 bits (208), Expect = 2.100e-16 Identity = 40/125 (32.00%), Postives = 76/125 (60.80%), Query Frame = 1
Query: 31 SSIPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALRED-ITGDNPYMVSPLAATAQTL 402
+++P+N + + FE+P FKGR+L+ +AGL ++ F G++R +Q VQG FK+E++F+ +TGQ + RP LP+ W + +++ +SP ++ IT P +++ LA+++Q +
Sbjct: 294 NNLPINGN-TPIEFESPYFKGRILVYIAGL-------ENSPDNIFAGRRRQLQTVVQGRFKKEVSFNDVFTGQEWFRPLLNLPSIWFVNLVVSILSAVSPTMKASGITSGKPSLLAKLASSSQVI 410
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A7J7Q9G7_9CHLO (Uncharacterized protein n=1 Tax=Scenedesmus sp. NREL 46B-D3 TaxID=2650976 RepID=A0A7J7Q9G7_9CHLO) HSP 1 Score: 80.9 bits (198), Expect = 1.530e-15 Identity = 47/134 (35.07%), Postives = 78/134 (58.21%), Query Frame = 1
Query: 28 HSSIPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRE-LAFDRAYTGQAYVRPFTQLPAKWLI-RSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTLRAEEPGE 423
H ++P N AV FETPLFKG++L+ + GL ++ F GK+RLM VQG FK+ ++FD G + RP +LPA L+ +++ ++ ++ ++ D +G P++++PL A AQ + EPG+
Sbjct: 85 HRTMPFNDTTQAVDFETPLFKGKVLVMMRGL-------ANTPARLFDGKRRLMWMVVQGRFKQPGVSFDGLCLGSEFCRPL-KLPAGTLLSKASMWLVSKMGSGVQLDTSGSCPHILAPLIAAAQVVNVSEPGQ 210
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A2A9M5H9_9APIC (Uncharacterized protein n=1 Tax=Besnoitia besnoiti TaxID=94643 RepID=A0A2A9M5H9_9APIC) HSP 1 Score: 82.0 bits (201), Expect = 1.990e-15 Identity = 41/111 (36.94%), Postives = 60/111 (54.05%), Query Frame = 1
Query: 70 FETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTL 402
FE P F+G ++IRVA + G+S Y KKR MQ VQG F + TGQ + LP +W++ V++RL+ L+EDIT ++PY ++P AQT+
Sbjct: 536 FENPFFRGVVVIRVAAV-----GESPGGATYTDSKKRCMQACVQGQFLQPHRVGEVLTGQVFSHALKSLPPRWMVSLGMKVVKRLTNTLKEDITSEHPYFLTPAVCVAQTV 641
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A7S2CW04_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CW04_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 2.140e-15 Identity = 36/96 (37.50%), Postives = 59/96 (61.46%), Query Frame = 1
Query: 127 RVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIR-RLSPALREDITGDNPYMVSPLAATAQTLRAE 411
R+ + +YF GK+R MQ A+QG FK+ L FD+ ++GQ + +P +P +WLI+ A +++R RL + D P+ +SPL +T+Q RA+
Sbjct: 2 RIADLKTSPADYFGGKRRKMQVAIQGKFKKPLRFDQVFSGQEFSKPLCNIPGRWLIKWALSLLRSRLPDTFQADAFAKKPFFLSPLISTSQAFRAD 97
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Match: A0A2R5GJI6_9STRA (Uncharacterized protein n=1 Tax=Hondaea fermentalgiana TaxID=2315210 RepID=A0A2R5GJI6_9STRA) HSP 1 Score: 80.1 bits (196), Expect = 7.930e-15 Identity = 45/135 (33.33%), Postives = 76/135 (56.30%), Query Frame = 1
Query: 16 GYEPHSSI--PVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDASQEYFRGKKRLMQCAVQGCFKRELAFDRAYTGQAYVRPFTQLPAKWLIRSAFAVIRRLSPALREDITGDNPYMVSPLAATAQTLRAEE 414
G++ +++ P+ ++ V+ PFET LF G + R+ GL + +YF G+ RL V G FK+E++F A TGQ + +P + P+ L++ + R L+P L+ + G+ YM+SPLA TAQ + +
Sbjct: 107 GWDAETNVGKPLPTNGVSFPFETDLFAGSAMFRMRGL--------STASDYFEGRARLSSIVVTGTFKQEVSFQDAMTGQEFCKP-VKSPSSLLVKPLLSFFRLLAPLLQIHV-GNQTYMLSPLAQTAQAIHVSD 231 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31737.8548.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31737.8548.1 >prot_H-paniculata_contig31737.8548.1 ID=prot_H-paniculata_contig31737.8548.1|Name=mRNA_H-paniculata_contig31737.8548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=142bp QVRLDGYEPHSSIPVNSDDVAVPFETPLFKGRLLIRVAGLPPRVPGQSDAback to top mRNA from alignment at H-paniculata_contig31737:763..1420- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31737.8548.1 ID=mRNA_H-paniculata_contig31737.8548.1|Name=mRNA_H-paniculata_contig31737.8548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=658bp|location=Sequence derived from alignment at H-paniculata_contig31737:763..1420- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31737:763..1420- >mRNA_H-paniculata_contig31737.8548.1 ID=mRNA_H-paniculata_contig31737.8548.1|Name=mRNA_H-paniculata_contig31737.8548.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=852bp|location=Sequence derived from alignment at H-paniculata_contig31737:763..1420- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |