mRNA_H-paniculata_contig3172.8544.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3172.8544.1
Unique NamemRNA_H-paniculata_contig3172.8544.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A6H5KHJ2_9PHAE (Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KHJ2_9PHAE)

HSP 1 Score: 439 bits (1129), Expect = 6.360e-152
Identity = 205/242 (84.71%), Postives = 220/242 (90.91%), Query Frame = 1 
Query:  169 KTSPLVSPGKPTPEFIAGAETRSLEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDASGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            K + LV  G P+ EFIAGA TRSLEREPYWDMSELP HTFKAKAPYTGT+++V  LVQP A+GEV+HVKLRHDG MPYWEGQSLGVTPPGLDA GKP+KVRLYSIASTRYGDDGDG+TVSLC+RRAT  D ETGKEDP+KEGVCSNFLCRA+ GQEVTLTGPSGKIML+PE TPDADVIMVGTGTGIAPYRGFLQRLF+EDTPA RAFTG AWLFLGVATTEGLLYHDDWM  LR+FPFNFR
Sbjct:   58 KANALVWAGAPSEEFIAGAHTRSLEREPYWDMSELPMHTFKAKAPYTGTIETVEKLVQPGASGEVFHVKLRHDGNMPYWEGQSLGVTPPGLDAKGKPHKVRLYSIASTRYGDDGDGRTVSLCVRRATVLDPETGKEDPAKEGVCSNFLCRARAGQEVTLTGPSGKIMLLPEETPDADVIMVGTGTGIAPYRGFLQRLFKEDTPAARAFTGTAWLFLGVATTEGLLYHDDWMEMLRKFPFNFR 299
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A836CII9_9STRA (Ferredoxin--NADP(+) reductase n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CII9_9STRA)

HSP 1 Score: 343 bits (881), Expect = 1.180e-113
Identity = 171/300 (57.00%), Postives = 211/300 (70.33%), Query Frame = 1 
Query:    1 DQVTKLREVLVAVRRVRAGSPPPSLSPAPTTVIAPEATEGQKKSGPATTGGSGKVGKTSPLV--SPGKPTPEFIAGAETRSLEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDASGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
             Q+ +L  +L  ++  +A      ++P  T V AP A     K  P       K  K  PLV  S   P+P+FI GA  + LE  PYWD S +P +TFK K PY GT+ SV  L   ++ GEV HV + H GK+PYWEGQSL V PPG DA+GKP+KVRLYSIAS+RYGDDG G+TV+LC+RRA F D E+GK+DP+K GVCSNFLC A  G  V++ GPSGKIMLMPE  P  D+IMVGTGTG+APYRGF++RLF+EDTPA RA+TG AWLFLGVA  + LLYH+DW++ +RRFPFNFR
Sbjct:   51 QQLEELTAMLSTLKSAKAAQTA-GVAPPDTAVAAPVA-----KIPPPVPHKKAKKDKDLPLVCASYEAPSPDFIYGATMQQLEANPYWDQSGVPTNTFKPKEPYPGTILSVERLTGAKSPGEVCHVTIDHGGKLPYWEGQSLNVLPPGTDANGKPHKVRLYSIASSRYGDDGAGRTVTLCVRRALFTDPESGKQDPAKAGVCSNFLCDAAAGAAVSIAGPSGKIMLMPEQDPTTDIIMVGTGTGVAPYRGFVRRLFQEDTPAARAYTGQAWLFLGVANRDALLYHEDWLSVVRRFPFNFR 344
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A8J6C0Y3_DIALT (Ferredoxin--NADP(+) reductase n=2 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J6C0Y3_DIALT)

HSP 1 Score: 311 bits (797), Expect = 1.260e-101
Identity = 144/220 (65.45%), Postives = 172/220 (78.18%), Query Frame = 1 
Query:  238 LEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDA-SGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            LE  PYWD S +P +T+K KAP+TG V S   +V P+ATGE  H+ + H+GKMPYWEGQS GV PPG +  +GKP  VRLYSIAS+RYGDD  GKT SLC+RRA + D ETGKED SK+GVCSNFLC A+PGQE+T+TGPSGK+MLMPE  P  D+IMV TGTGIAPYRGF++RLF E TPAG A+ G AWLFLGVA ++ LLY D+W A+L+  P NFR
Sbjct:   76 LEATPYWDTSNIPLNTYKNKAPFTGKVVSCKRMVGPQATGETCHIIINHEGKMPYWEGQSYGVIPPGTNPKNGKPNSVRLYSIASSRYGDDMTGKTGSLCVRRAVYVDPETGKEDDSKKGVCSNFLCDAKPGQELTMTGPSGKVMLMPEQDPKTDLIMVATGTGIAPYRGFIRRLFVEKTPAGAAYKGQAWLFLGVANSDSLLYDDEWQASLKTHPSNFR 295
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A8J5XIC4_DIALT (Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema lutheri TaxID=2081491 RepID=A0A8J5XIC4_DIALT)

HSP 1 Score: 308 bits (789), Expect = 7.830e-101
Identity = 141/220 (64.09%), Postives = 171/220 (77.73%), Query Frame = 1 
Query:  238 LEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDA-SGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            LE  PYWD S +P +TFK KAP+TG V SV  +V P ATGE   + ++H GKMP+WEGQS GV PPG++  +GKP  VRLYSIAS+RYGDD  GKT +LC+RRAT+ D ETGKEDP+K+GVCSNFLC + PG+E+++TGPSGK+MLMPE  P  D+IMV TGTGIAPYRGF++RLF E TPA  A+ G AWLFLGVA ++ LLY D+W A  R FP NFR
Sbjct:   46 LEANPYWDQSNIPLNTFKNKAPFTGKVLSVKRIVGPAATGETCDIVIKHGGKMPFWEGQSYGVIPPGINPKNGKPNSVRLYSIASSRYGDDMTGKTATLCVRRATYVDPETGKEDPAKKGVCSNFLCDSTPGREISMTGPSGKVMLMPEKDPKTDLIMVATGTGIAPYRGFIRRLFVEKTPAAAAYEGQAWLFLGVANSDSLLYDDEWQAAKRSFPSNFR 265
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A7S3ZWG2_9STRA (Ferredoxin--NADP(+) reductase n=2 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZWG2_9STRA)

HSP 1 Score: 300 bits (769), Expect = 2.670e-98
Identity = 140/230 (60.87%), Postives = 171/230 (74.35%), Query Frame = 1 
Query:  208 EFIAGAETRSLEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDA-SGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            E  AG +   LE  PYWD S +P +TFK K+PYT  V S   +V PEATGE  H+   H G MPYWEGQS GV PPG +  +GKP+ VRLYSIAS+RYGD+  GKT SLC+RRAT++D + GKEDP+K+GVCSNFLC A  G++V +TGP+GK+MLMPE   D D IMV TGTGIAPYRGF++RLF E TPAG A+ G+AWLFLGVA ++ LLY ++W A   +FP NFR
Sbjct:    1 ESPAGKKQDFLEASPYWDQSTVPVNTFKNKSPYTAKVVSCKRIVGPEATGETCHIIFDHKGNMPYWEGQSYGVIPPGTNPKNGKPHTVRLYSIASSRYGDNMAGKTSSLCVRRATYWDPDMGKEDPAKKGVCSNFLCDATAGEQVKMTGPTGKVMLMPEEKADTDYIMVATGTGIAPYRGFIRRLFTETTPAGEAYKGLAWLFLGVANSDALLYDEEWQAAKSKFPDNFR 230
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A7S2FG73_9EUKA (Ferredoxin--NADP(+) reductase n=1 Tax=Haptolina brevifila TaxID=156173 RepID=A0A7S2FG73_9EUKA)

HSP 1 Score: 301 bits (771), Expect = 2.200e-97
Identity = 153/244 (62.70%), Postives = 182/244 (74.59%), Query Frame = 1 
Query:  169 KTSPLVSPGKPTPEFIAGAETRSLEREPYWD-MSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGL-DASGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            KT+   +  +P+ E +A      LE EPY D M  LP +T+K KAP+TG++ S   +V  EA GEV H+ +       Y EGQSLGV PPG+   SGKP  VRLYSIASTRYGDD DG +VSLC+RRAT++DKE GKEDP+K+GVCSNFLC A+PGQE+TLTGP+GK+MLMPEATPDAD+IMV TGTGIAPYRGFL+RLF E TPA  AFTG+AWL LGV  T+ LLY DDW A  +R P NFR
Sbjct:  131 KTNRATAAARPSHEEVAVPS--HLEFEPYHDIMKNLPLNTYKNKAPHTGSLISAKRIVGAEAPGEVCHIHINSGPTFKYIEGQSLGVIPPGVCPKSGKPNSVRLYSIASTRYGDDLDGNSVSLCVRRATYWDKELGKEDPAKKGVCSNFLCDAKPGQELTLTGPTGKVMLMPEATPDADLIMVATGTGIAPYRGFLRRLFVEQTPAKAAFTGLAWLVLGVPVTDSLLYPDDWAAIAKRNPDNFR 372
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A7S1XXE3_9STRA (Ferredoxin--NADP(+) reductase n=6 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XXE3_9STRA)

HSP 1 Score: 298 bits (763), Expect = 1.440e-96
Identity = 136/220 (61.82%), Postives = 167/220 (75.91%), Query Frame = 1 
Query:  238 LEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDA-SGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            LE EPYWD S +P +T+K K+P+ G V SV  +V   ATGE  H+ + H GKMPYWEGQS GV PPG +  +GKP+ VRLYSIASTRYGDD  GKT SLC+RRA ++D E G EDP+K+G+CSNFLC A PG E+T+TGPSGK+MLMPE  P+ D+IMV TGTGIAPYRGF++RLF E TPA  A+ G AWLFLGVA  + LLY D++   L+ +P NF+
Sbjct:   70 LEAEPYWDQSTIPVNTYKTKSPFIGKVTSVKRIVGENATGETCHIVIDHQGKMPYWEGQSWGVIPPGTNPKNGKPHSVRLYSIASTRYGDDMTGKTGSLCVRRAVYWDPEMGAEDPAKKGICSNFLCDATPGTELTMTGPSGKVMLMPEEDPETDLIMVATGTGIAPYRGFIRRLFTEATPAAAAYKGEAWLFLGVANKDSLLYDDEFSTVLKNYPENFK 289
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A7S1UCU0_9STRA (Ferredoxin--NADP(+) reductase n=4 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UCU0_9STRA)

HSP 1 Score: 297 bits (761), Expect = 2.890e-96
Identity = 134/220 (60.91%), Postives = 168/220 (76.36%), Query Frame = 1 
Query:  238 LEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDA-SGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            LE EPYWD S +P +T+K K+P+ G V SV  +V   ATGE  H+ + H GKMPYWEGQS GV PPG +  +GKP+ VRLYSIASTRYGDD  G T SLC+RRA ++D E G EDP+K+G+CSNFLC A PG E+T+TGPSGK+ML+PE  P+ D+IMV TGTGIAPYRGF++RLF E+TPA  A+ G AWLFLGVA ++ LLY D++   L+ +P NF+
Sbjct:   70 LEAEPYWDQSTIPVNTYKTKSPFIGKVTSVKRIVGENATGETCHIVIDHQGKMPYWEGQSYGVIPPGTNPKNGKPHSVRLYSIASTRYGDDMTGNTGSLCVRRAVYWDPEMGAEDPAKKGICSNFLCDATPGTELTMTGPSGKVMLIPEENPETDLIMVATGTGIAPYRGFIRRLFTENTPAAAAYKGQAWLFLGVANSDSLLYDDEFSTVLKNYPENFK 289
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A7S3U4X7_9SPIT (Ferredoxin--NADP(+) reductase (Fragment) n=3 Tax=Eukaryota TaxID=2759 RepID=A0A7S3U4X7_9SPIT)

HSP 1 Score: 297 bits (761), Expect = 3.280e-96
Identity = 136/233 (58.37%), Postives = 172/233 (73.82%), Query Frame = 1 
Query:  199 PTPEFIAGAETRSLEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDA-SGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            P P   A  +   LE  PYWD S +P +T+K KAP+TG + SV  +V PEATGE  ++ + H+GKMPYWEGQS GV PPG++  +GKP  VRLYSIAS+RYGDD  G T +LC+RRAT++  E   EDP+K+GVCSN+LC A+PG EV LTGPSGK+ML+PE  P+ D+IMV TGTGIAPYR F++RLF E TP G  + G+AWLFLGVA ++ LLY D+W + L+  P NFR
Sbjct:   60 PAPAASASGKQDFLEASPYWDQSNIPVNTYKNKAPFTGKIISVKRIVGPEATGETCNIVMSHEGKMPYWEGQSYGVIPPGINPKNGKPNSVRLYSIASSRYGDDMTGTTTTLCVRRATYWCPELKAEDPAKKGVCSNYLCDAKPGDEVKLTGPSGKVMLIPEQNPNVDLIMVATGTGIAPYRSFIRRLFVEKTPFGEVYKGLAWLFLGVANSDALLYDDEWQSVLKSHPNNFR 292
[Close]
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Match: A0A0M0K6N9_9EUKA (Ferredoxin--NADP(+) reductase n=1 Tax=Chrysochromulina tobinii TaxID=1460289 RepID=A0A0M0K6N9_9EUKA)

HSP 1 Score: 298 bits (764), Expect = 3.620e-96
Identity = 146/239 (61.09%), Postives = 181/239 (75.73%), Query Frame = 1 
Query:  181 LVSPGKPTPEFIAGAETRSLEREPYWDMSELPNHTFKAKAPYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPG-LDASGKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVCSNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFLQRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR 894
            + +PG+P       A    LE EPY+D+S +P +TFK KAP+TGT+ S   +V  +A GEV HV ++      Y EGQSLGV PPG    SGKP  VRLYSIASTRYGDD DG++VSLC+RRA ++DK+ G+EDP+K+GVCSN+LC A+PGQ VTLTGP+GK+MLMPEATP+AD+IMV TGTGIAPYRGFL+RLF E TPA  AF G+AWL LGV T++GLLY +DW A  +R P +FR
Sbjct:   98 IAAPGEPV------AVPSHLEFEPYFDISTMPLNTFKNKAPHTGTIVSAKRIVGDKAPGEVCHVHIKSGAVFKYIEGQSLGVIPPGNCPKSGKPNTVRLYSIASTRYGDDLDGESVSLCVRRAVYWDKDLGREDPAKKGVCSNYLCDAKPGQLVTLTGPTGKVMLMPEATPEADLIMVATGTGIAPYRGFLRRLFIEQTPAAAAFRGLAWLVLGVPTSDGLLYDEDWQAIAKRHPKHFR 330
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3172.8544.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5KHJ2_9PHAE6.360e-15284.71Ferredoxin--NADP(+) reductase n=2 Tax=Ectocarpus T... [more]
A0A836CII9_9STRA1.180e-11357.00Ferredoxin--NADP(+) reductase n=1 Tax=Tribonema mi... [more]
A0A8J6C0Y3_DIALT1.260e-10165.45Ferredoxin--NADP(+) reductase n=2 Tax=Diacronema l... [more]
A0A8J5XIC4_DIALT7.830e-10164.09Ferredoxin--NADP(+) reductase n=1 Tax=Diacronema l... [more]
A0A7S3ZWG2_9STRA2.670e-9860.87Ferredoxin--NADP(+) reductase n=2 Tax=Pelagomonas ... [more]
A0A7S2FG73_9EUKA2.200e-9762.70Ferredoxin--NADP(+) reductase n=1 Tax=Haptolina br... [more]
A0A7S1XXE3_9STRA1.440e-9661.82Ferredoxin--NADP(+) reductase n=6 Tax=Phaeomonas p... [more]
A0A7S1UCU0_9STRA2.890e-9660.91Ferredoxin--NADP(+) reductase n=4 Tax=Phaeomonas p... [more]
A0A7S3U4X7_9SPIT3.280e-9658.37Ferredoxin--NADP(+) reductase (Fragment) n=3 Tax=E... [more]
A0A0M0K6N9_9EUKA3.620e-9661.09Ferredoxin--NADP(+) reductase n=1 Tax=Chrysochromu... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3172contigH-paniculata_contig3172:11327..18525 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score440.3
Seed ortholog evalue7.4e-121
Seed eggNOG ortholog2880.D7FSR5
Hectar predicted targeting categoryother localisation
EggNOG free text desc.NADPH-hemoprotein reductase activity
EggNOG OGsCOG0369@1,KOG1158@2759
COG Functional cat.P
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons6
Model size897
Cds size897
Stop1
Start0
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3172.8544.1prot_H-paniculata_contig3172.8544.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3172 11327..18525 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929976.8917656-CDS-H-paniculata_contig3172:11326..115831622929976.8917656-CDS-H-paniculata_contig3172:11326..11583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 11327..11583 +
1691481094.6801112-CDS-H-paniculata_contig3172:11326..115831691481094.6801112-CDS-H-paniculata_contig3172:11326..11583Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 11327..11583 +
1622929976.9132328-CDS-H-paniculata_contig3172:11998..121011622929976.9132328-CDS-H-paniculata_contig3172:11998..12101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 11999..12101 +
1691481094.6920784-CDS-H-paniculata_contig3172:11998..121011691481094.6920784-CDS-H-paniculata_contig3172:11998..12101Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 11999..12101 +
1622929976.9262023-CDS-H-paniculata_contig3172:13376..134811622929976.9262023-CDS-H-paniculata_contig3172:13376..13481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 13377..13481 +
1691481094.7049086-CDS-H-paniculata_contig3172:13376..134811691481094.7049086-CDS-H-paniculata_contig3172:13376..13481Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 13377..13481 +
1622929976.9429736-CDS-H-paniculata_contig3172:15039..151651622929976.9429736-CDS-H-paniculata_contig3172:15039..15165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 15040..15165 +
1691481094.716839-CDS-H-paniculata_contig3172:15039..151651691481094.716839-CDS-H-paniculata_contig3172:15039..15165Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 15040..15165 +
1622929976.9580476-CDS-H-paniculata_contig3172:17070..172641622929976.9580476-CDS-H-paniculata_contig3172:17070..17264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 17071..17264 +
1691481094.7294233-CDS-H-paniculata_contig3172:17070..172641691481094.7294233-CDS-H-paniculata_contig3172:17070..17264Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 17071..17264 +
1622929976.9750495-CDS-H-paniculata_contig3172:18413..185251622929976.9750495-CDS-H-paniculata_contig3172:18413..18525Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 18414..18525 +
1691481094.737686-CDS-H-paniculata_contig3172:18413..185251691481094.737686-CDS-H-paniculata_contig3172:18413..18525Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3172 18414..18525 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3172.8544.1

>prot_H-paniculata_contig3172.8544.1 ID=prot_H-paniculata_contig3172.8544.1|Name=mRNA_H-paniculata_contig3172.8544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=299bp
DQVTKLREVLVAVRRVRAGSPPPSLSPAPTTVIAPEATEGQKKSGPATTG
GSGKVGKTSPLVSPGKPTPEFIAGAETRSLEREPYWDMSELPNHTFKAKA
PYTGTVDSVHSLVQPEATGEVYHVKLRHDGKMPYWEGQSLGVTPPGLDAS
GKPYKVRLYSIASTRYGDDGDGKTVSLCIRRATFFDKETGKEDPSKEGVC
SNFLCRAQPGQEVTLTGPSGKIMLMPEATPDADVIMVGTGTGIAPYRGFL
QRLFEEDTPAGRAFTGVAWLFLGVATTEGLLYHDDWMATLRRFPFNFR*
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mRNA from alignment at H-paniculata_contig3172:11327..18525+

Legend: polypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3172.8544.1 ID=mRNA_H-paniculata_contig3172.8544.1|Name=mRNA_H-paniculata_contig3172.8544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7199bp|location=Sequence derived from alignment at H-paniculata_contig3172:11327..18525+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCAGGTGACCAAACTGCGAGAGGTGTTGGTGGCTGTGAGGAGAGTCCG
CGCCGGATCGCCACCGCCATCACTATCACCGGCCCCCACTACCGTGATTG
CTCCCGAGGCAACGGAGGGGCAGAAGAAGTCAGGCCCTGCTACCACAGGC
GGCAGTGGTAAAGTGGGGAAGACGTCTCCGCTTGTGTCACCGGGCAAACC
CACGCCCGAATTCATTGCCGGAGCGGAGACCCGGTCCTTGGAACGGGAGC
CGTACTGGTGAGAGAATAATATATATATATATATATATTTGTCCGTCAAG
TGTCCCATGAAGATATCGTCAATTACTCGAGCCAACCTTGATTGCAAGTA
CTGTGGTTATCGAAAGCGAGTCCACAGGATGACTGCGAAATCCTCGGTTT
GGCGAAAGTCTCACCGATATTTCCCGTGACTTTTCACGTCAGCGGCACAT
CGATGCTAGGCTTCTTATTTTTCTAGAGCCAGTTCGCGATCGGTCTTGTC
TGTAATTCAGGGTGTTCGGTCGGTCGGTCGGTCGGTCGGTCGGTCGGTCG
GTTGGTTGGCGGTCGGTTCTCTCAGTCTGTTTTGCAGGCCATGCAAAAAA
AAAAAAAATGAAAAATATGTCTTGTTGTTTGTATTTCGTTTCGTTCCTTG
CACGTGTCGTATCCATTTAAAGGGATATGTCGGAACTGCCGAATCACACC
TTCAAAGCAAAGGCGCCCTACACGGGCACCGTGGATAGCGTTCACAGTCT
CGTCCAGCCAGAGGCAACCGGCGAGGTATTTGCTTGGCCACAGTTGGTCA
TACTCCATTGTAAATACCGTCTATTACCCGAGAACACCACACGATCCATT
TTTGCGGACAGTTGAAGGGTTTTCAAACTCAATTTATTTCGAGAACGGAG
ATCTTGTGCAGTCGAAAGAACTTGTCTATAATCGACGACAGATGAATATC
CCGAGCAAGGTCAAGATCTACGTATTTTTCCTATAACACACTCGCCTTTC
ATTTGTCAGTATCCAGTAGCGCCTTATGGAAGTTGTCGAGATGATGATCG
CGTTTGAATAATCTTCGCACCCACTCGAGTACACCGGTATCCCCAGCTAC
TACGGGGCATAAAGCCACGGTGGTCGCTTGATTCAAAGGTCGATGTTGTC
GAGAGTAGGCATCCTTTCTCTTTTTTCGAGCAATATTTGGCTGTCAATGG
ATCGAGATTGCCCGTGGTCACAAGGCTGGACTTGTAATGCTTCGCTACGC
TGCCGAAAATAGGAAATAGTAGGTCTTTCTAATGACCTATCGAGATGTCG
CCAAGATGTTTGCAACAACGCAACTCTCGGTTGGTTGTTGTATGCTTTGC
CACAGTGGGATTTTTCGTGTGCAATGTGTGAGGTTTCGATTTTTTTTTTT
TTTAATTGGTGCAGAAATTGACAATAATTGGTGTCTCTTCCTTCGGAGGG
TAAATATATATTTTGAATGCGGTCTTTCCTGTCAAACTGTCCACGCTGTT
GTGTATTTTATGTGCATGTGTTGCGGTGGTTTGGAAAATCCACGAGTGGT
GGTGTATGCATGTGTAGGCAGGCGTACGGGAAGACCAAAATGACTTGGGA
TCAAAAAGACGTACCCCGGTCTTGGACGGAGAGGGTTATAAGTCCCTTCG
GGCGTGACGGGTAGTGTCCTCTTTTCCCAGTTCCCATCGTCACGATCCGC
TGTCTTTGCTTATTGGTCATAGGTTGTTGGTCGTTGGTCTCTGGTCATTG
GTTGTTGTTCTTTCATCTCTGGTCGTTGGTATTTGGTATTTGGTATTTGG
TATTTGGTATTTGGTATTTGGTATTTGGTTATTGGTTTTGGCTATTGGTC
AGTAGTCGTTGGTTATGTTATTAGTTAGTGGTTGGTGGTTGGTGGTTGGT
GGTTGGTGGTTGGTGGTTGGTGGTCGTGGTCGTGGTGGTTTTTATTGCTG
ATGCTCATGCTCATGACGCTGTTGATGTTGCTGCTGTAGCTGCCTTCAAT
TTCACGTCCGCTTAATGCCCGCGTCGATCCATGGGGACTCTACGAAATAG
GTGTATCACGTGAAGCTACGACACGACGGAAAAATGCCGTACTGGGAAGG
ACAGAGCCTTGGAGTAACACCTCCTGGACTGGACGCCAGCGGCAAGCCGT
ACAAGGTAGAAGTTCACCTGGTCTTCGCCCCGTTGGGTAGCTGGTTGACC
CGATAGGAAAATAATAGTAATAATCAGCAGCGGCAGCCATCGTAGAGGTG
GCTGGTTAGTTCCGCGGAATTTTTCCACGGAAGTAGCGGAGCCTGAAACG
CCTACTGTTGTCGTGGACGTCGCCACCTCCACCTCACCCTCGCCGCCGCT
CCCGTCCGCGTCTTATTCTCGGCTGTAGCGTAGGCGCTGGTTTTATCATC
GTACTGTAGAGGCAAAGACAGGGGCAGCGTCGAACTCCAAAGCATTGCTG
CTTTTGCCAAACAAGAATAACTGCTTGATGCAATCTTTTATCCAAACCAT
TGACCGATCTCTGGCGCGCGAATGAAGGAGTTAATACTTTTTCTTTCTTT
TTTTGAACCAGGCCTCTGTTTATTTGGGCTTTTTACAGAAATATTGGCAA
TGTACAGTAGTAGTGTCAGCAATTCGTCATTCTTTTACGAGGTAGTGGTT
GCGAGGTACCTGTTGTGCAATGTTTTGGTTGTAGCAAGGTTCTCGTTCCT
CCGGTGTTGGGTACAACAGTTGATTAAAGAAAACACACACACACACACAC
AAACACACACACACACGCGCGCGCGCGCAGGGAAAGAAATCTTATTTCTT
GTAATGAAAATGTCTTTTCTTTTTTTTTCACAAATAGCACTTTCGCCTCA
AGCTTTAGCACATTTATTAACCTTGATACTCCAACGTAGAGAAATATGCC
GAGATCCTGAGGTGCGGTCGTACATTCCAGTAGTAAAAAATCGAATAAAT
TTGGAGGGGGTTTGGGAAGGGCCTTCTTGCCAAGTATCTTGGGTTTGTCA
CAGTCGTGTTCCATTATCCGCAATGGCCTTCATCGATCTGCCTCCGAAGT
CTGGAATGTGGAAGATTTATTTCCAGAGTAGTGACTCCCCCGCCAAAGAA
AGCTAACGCCTAACAGCATTGGGTTCATGGTGATCATCGCACACAGTCAG
CTTTGTATACACTGGGGGCATTTCACCTGTCTTGTTTGCTTTTGTGCTTT
ACTTAGCCTGATGCACTGTAGGTTGCAAACCTCGTCGACGTGTGTAGTGG
CACAGTTGTAACCGCGCTCAGCTAGCTGTGAGTCCTTTTGTGGAAGCATT
TTGGGCTCTCGCGAAATCATGAGTCATAGGAGTAGTCGTTGTTACTCGAT
ACAAGTGCGGTAAGGTTTGTCGTTGTCGTTGTCGTTGTCGTCGTCGCCGT
CGTCGTCATATCATTCGGAGCATGTTTGAAAGTTCTGTACTCGAAATGAA
ATTCTTTTTAAATGAAACTTTGTAGTGATCGCAGCGAGCGGGAAGGTGTG
CGCGGGTCGAGGACGAAGCACGGATTGGAGTATATGATTATGGGTGAGTA
TTGACATCATGGCCCGTCAAATTATTTCTGGGTGGGCAATGATGGACAAT
TTCTCCTCCGTGCACCGCACAAACGACAGTTGTTATTCATGAAGAAGTGG
GTGGTGGATCATGACCACTAGTAGGTGCGAGAAATGAACTATGCTGCATG
CGGGCATCATCAGGTGCGGCTGTACTCGATCGCGTCAACCCGGTACGGAG
ACGATGGGGACGGCAAGACGGTGTCGCTCTGCATTCGGCGAGCAACGTTC
TTCGACAAGGAAACGGGCAAGGAAGATCCTTCCAAGGAAGTGAGAAAGAC
ATACCTACAGTACCGGTATCATACTATAATTCGAGTAATTTTTTGTAGAT
TTTTATATTACTGAGTATAGAGGTATACAATACATATATCGCCAGTAAAA
CGAGAGAAATATGTTTCTTTTTCAATGTCGACGTAGATTCCAAATCTGGA
AGCTTTTTTTTTTTTTTTTTTTTGCTAATTCGAACTGTACGGGTATTGAT
TCCGATTTATTACATTTTGGTGTTCGTTTTAGTGGCACAGTGGCACTGCT
AGTACCCACGACTTATACAAAAACCAACATATTTAGGCATGGTCTCATAA
TGCTCAGATTTTTTTTTATGCTCCACGAATCACGAAAAGCTGTGCCCATT
TTGTGGAATTTATTCCCCAATTATGCTCGGATTTTCCAAGAATTTATGCT
TAAATTTATGGTAGCATGATGAGGCAATGCCTACCCATATTATGTAGGTG
TGTGTGTGTTTTTCGGGAGCTAATTTAGGGTCACCTGGTACTTGTAATTT
TTTGGCGGAAAATCTTTTTATCAGCAGCTATTTTTGATTTGAATGCTGCT
GCTTGGTTTTTTACTGCCTCTATTTTGGATTTGAACACTGTCTGTTGCGT
GTGTGTTACCGTTATTCCTTCTTCTCTTGATTCGAACACTGCTGGGTTTT
TTTTTCGTACTCTTATTATTTGAGGTGGAGCCCATGCGATTTGGCTTTCA
ATTGTGTTGCACGTGGTGATGTAATAATCAGTAGTATTGATTTCACTTCA
CGGATATATATATATATATATATATATATATTTGCTGTACCGTACCACCC
TTCCTGTTGTTGTAGATAGCTTTGCTGATGAGGACGTACAGCCGTGATTA
TAGGTAGGCTACATGACCTCAGCATGAGTGTTATCAAACTTACTATCATG
TAATCCTTCTTATTTGATAGGGTAAAGGTGGTGCTGCTGGTATTGGTCGC
TGTCGTGGTCGCTGTCGTGGTCGTGGTTGTCGATTCGGAACATAATTTTT
CAATATTGAATTCAAGTAACCCCTGAAAAACGAATCTTGGTGCGAGTGTA
GGGAGCTACTGTGATCAACGCAGCGAGTCTGTGGTTTGTGTTGAAGACAA
GCCGCCACGAACTGCACGATCTATAGCCGTGGTTCTACCATCAATAAAAC
GGCGTCGTTTGTGACTGCTCTGCTACGTACGTCCGGCATGTTTTGCGTTT
TGATAAATCGAAATATGGTGATCGTCGTGTGGAGCGATAATCCCAAACAG
CCAAGGAATATCTTGTGTATGTGTGTTGCCGAGGGACAACTACAGGAATG
CTTGTTGAAGGAGTGAGGGTGATGACGTGGTGTTGTGTGCTCTTGTTTTC
TTTTTTTTGCTACTAGGTCATGCTACATCTAAACATATTTACACACGCCT
GATTGGTCTAAGTTTGCTAATGAGTGTATACAACTTAAGTTTCAGTTCAG
CTGCATAACTTTGACATCCCCCCTTACCGGTCATAATCCAATTTTGTTGA
TGAGTGTTGATGATTAATGGGACATATGTTCTTAATTGGCCCACGATTTT
TACGTCTATATGCACACGTCACATATGCGAGTGTTTTTCCCTCTGCAGGC
ACAGTAGTATTCAATACCCCCCCCCCCCCCCCCCCCCCCCCTAATTTGTT
TAGTTTGTGGATAATAACATAGTAACAAGTAATCCAGCAGCTTGAAGATG
CTGAGCATGCAATACCTCCATTTTGTTTCACGGTTGTTCTCGTTTTTTTC
TACAGTACAGACAGTAATTTGTGCTTACAATATCTGCTTGCACTGTTTTA
CTTGTTCTTTACTTCATGGCTTTTGTCCCCCGCCCCCCCGCCTGCCGCCG
CCGCCGCCGCCCCACTGAATGTAATTTGTAAAATGTATGTGTAGGGCGTT
TGCTCGAATTTTTTGTGCAGGGCGCAACCAGGGCAAGAAGTAACCCTCAC
CGGCCCCAGTGGAAAAATCATGCTGATGCCGGAGGCCACGCCCGATGCTG
ACGTCATCATGGTGGGGACCGGAACTGGCATCGCACCTTACAGGGGATTT
TTGCAACGTCTGTTCGAGGAGGATACCCCTGCAGGAAGGTAAACACTTAT
GGATCATGACTTTTGTTAGCGTCGCGAAAGCCTGTTACACAGTCGGGACC
CCATTTGGCTTCGTTTTCTTCTTTTTTTTACGTTTTCTCAGTGCTGCAAC
TTTTTTTTCGGACAAAAAGCAAAGTATTAAGAAAATAATTTCTAAAATAT
TCAGTCGCTTATGGGTAGAGCCATGATGGCAACTTGCCTTTACGGAACTC
TCTGTACGGGGCTATCTGTACTGGATGGGATCGTCTTTACCGCACTGTCT
GGACTGGACGTTTTGCATGATACTGCCTGTACTGTACTATCTGTAATGGG
CTAGCTATTTGAATAACGACAGTTCCCAATCTTCATTACGTAGTCATGTT
ACAGGCGCTGTATTTACCCCCCTGCTTTTTAGGTAGGGATTACGTCGTTC
TTTAGGATCTTGTAACCCTCTAGTCACCCATGGAGTGCTTGCTTTGTATT
TGGCCGTTACGAAGAAAAGTCGTATTTGCCTGCTCTCGCTCAACACTAAA
TCCAAGATGAAAGCCGCCAAACGGCTTAAAAACGACCCCCCCCCCCCTGC
ACCTGAAGAGCACTGTTTATTAAGGCATTATGTCGACATACTCGTCATTA
TTAAATCTGCCTTATGGCTGTTGCAAAGTCCTGTTCCTAGATGGGAACTA
GTGTGAACAGAGGGTTTGAGATCATTTCTCTCCTTTGATTTCTCCTCCGA
GTGATGCGCCATATGTTGACGGTGATGAACGCCACTGGGGACGAGAGAGG
GGGAGCAGGTCACCGAATCGGGCCAAATTGGTAGGCGTGTCAAGCACATC
CCAGGGATTGTGCCGTGGGATCCTTTGTATATAGGTTACATCATGTGCTG
TGTAACACCTTTGACAAAAGTGTCATCCTACAATGTTGGTCACATCGTAG
ATAGTAAAAGCTGGTGTGGAGGGGAGATGCTATGATCCATTTTTCCATCC
AGTAACGACCTTTAGTCATTCTTCGTTTTAGTCTTTTTTTTTGGAGTTAT
AATTTGTTGCTTTTTTTTTCTTTTTTAGCGTACGTTTATATATTAAATTG
CTGCTACATTTAAACGCTATCGAAATGTGTCAAAAGCTATCAAGACGTTT
TATGAAACGTTTTCGTGTCGTGATGGAATATCACCAGGGCGTTCACCGGA
GTGGCTTGGCTGTTCCTGGGAGTGGCGACGACGGAAGGGTTGCTCTACCA
CGATGATTGGATGGCGACGTTGAGGCGGTTCCCCTTCAACTTCAGGTGA
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Coding sequence (CDS) from alignment at H-paniculata_contig3172:11327..18525+

>mRNA_H-paniculata_contig3172.8544.1 ID=mRNA_H-paniculata_contig3172.8544.1|Name=mRNA_H-paniculata_contig3172.8544.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1794bp|location=Sequence derived from alignment at H-paniculata_contig3172:11327..18525+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GACCAGGTGACCAAACTGCGAGAGGTGTTGGTGGCTGTGAGGAGAGTCCG
CGCCGGATCGCCACCGCCATCACTATCACCGGCCCCCACTACCGTGATTG
CTCCCGAGGCAACGGAGGGGCAGAAGAAGTCAGGCCCTGCTACCACAGGC
GGCAGTGGTAAAGTGGGGAAGACGTCTCCGCTTGTGTCACCGGGCAAACC
CACGCCCGAATTCATTGCCGGAGCGGAGACCCGGTCCTTGGAACGGGAGC
CGTACTGGACCAGGTGACCAAACTGCGAGAGGTGTTGGTGGCTGTGAGGA
GAGTCCGCGCCGGATCGCCACCGCCATCACTATCACCGGCCCCCACTACC
GTGATTGCTCCCGAGGCAACGGAGGGGCAGAAGAAGTCAGGCCCTGCTAC
CACAGGCGGCAGTGGTAAAGTGGGGAAGACGTCTCCGCTTGTGTCACCGG
GCAAACCCACGCCCGAATTCATTGCCGGAGCGGAGACCCGGTCCTTGGAA
CGGGAGCCGTACTGGGATATGTCGGAACTGCCGAATCACACCTTCAAAGC
AAAGGCGCCCTACACGGGCACCGTGGATAGCGTTCACAGTCTCGTCCAGC
CAGAGGCAACCGGCGAGGGATATGTCGGAACTGCCGAATCACACCTTCAA
AGCAAAGGCGCCCTACACGGGCACCGTGGATAGCGTTCACAGTCTCGTCC
AGCCAGAGGCAACCGGCGAGGTGTATCACGTGAAGCTACGACACGACGGA
AAAATGCCGTACTGGGAAGGACAGAGCCTTGGAGTAACACCTCCTGGACT
GGACGCCAGCGGCAAGCCGTACAAGGTGTATCACGTGAAGCTACGACACG
ACGGAAAAATGCCGTACTGGGAAGGACAGAGCCTTGGAGTAACACCTCCT
GGACTGGACGCCAGCGGCAAGCCGTACAAGGTGCGGCTGTACTCGATCGC
GTCAACCCGGTACGGAGACGATGGGGACGGCAAGACGGTGTCGCTCTGCA
TTCGGCGAGCAACGTTCTTCGACAAGGAAACGGGCAAGGAAGATCCTTCC
AAGGAAGTGCGGCTGTACTCGATCGCGTCAACCCGGTACGGAGACGATGG
GGACGGCAAGACGGTGTCGCTCTGCATTCGGCGAGCAACGTTCTTCGACA
AGGAAACGGGCAAGGAAGATCCTTCCAAGGAAGGCGTTTGCTCGAATTTT
TTGTGCAGGGCGCAACCAGGGCAAGAAGTAACCCTCACCGGCCCCAGTGG
AAAAATCATGCTGATGCCGGAGGCCACGCCCGATGCTGACGTCATCATGG
TGGGGACCGGAACTGGCATCGCACCTTACAGGGGATTTTTGCAACGTCTG
TTCGAGGAGGATACCCCTGCAGGAAGGGCGTTTGCTCGAATTTTTTGTGC
AGGGCGCAACCAGGGCAAGAAGTAACCCTCACCGGCCCCAGTGGAAAAAT
CATGCTGATGCCGGAGGCCACGCCCGATGCTGACGTCATCATGGTGGGGA
CCGGAACTGGCATCGCACCTTACAGGGGATTTTTGCAACGTCTGTTCGAG
GAGGATACCCCTGCAGGAAGGGCGTTCACCGGAGTGGCTTGGCTGTTCCT
GGGAGTGGCGACGACGGAAGGGTTGCTCTACCACGATGATTGGATGGCGA
CGTTGAGGCGGTTCCCCTTCAACTTCAGGTGAGGCGTTCACCGGAGTGGC
TTGGCTGTTCCTGGGAGTGGCGACGACGGAAGGGTTGCTCTACCACGATG
ATTGGATGGCGACGTTGAGGCGGTTCCCCTTCAACTTCAGGTGA
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