mRNA_H-paniculata_contig3166.8534.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3166.8534.1
Unique NamemRNA_H-paniculata_contig3166.8534.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI)

HSP 1 Score: 1171 bits (3029), Expect = 0.000e+0
Identity = 666/1068 (62.36%), Postives = 793/1068 (74.25%), Query Frame = 2
Query:   89 VVTAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDL-GVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCRSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSSTEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGDCWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHANCEWVSSAPEESTAGLAHADMQTVWTRAVAFTIDVSTFREDADVDGT-------VKPPSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITG---GQGRLPVHGTS-AYANPNPHRSRALMAHEILAASEAVVSLLTSEIRHLSEDAWSLTERGDEAAADALRTSFYLLCVDMAAGLANHFRLTLQEIHSCIRGAAKQECGIALDGGA-RELEDAVGRFADAALVIGRVAWMLSGRSGRPLQSALTCPSSFAQNLRGRVEQQQLEAAFVIADTNGDGIVDADEAAEALQAVSFGSCADHVLDPTSYSSLTITEFFLFATRLLEEQIPLDHLICCLDDVLVKSLAVWSEWALERPATLLAIGCDDLATLCCSPGMTDDLWRQTHGIWEDKTIELDRDDGDGVQETIHFPVMISPALLCYIEGVAAELSRILSTSDL----IAASCVKKHTVNRQESARGGQSANHEHSRGTTPSQETTRRARSLAASRASSDLKKALVVLCDGLQAAASQACEAAHLQLLLDALFLQKWVSDNA-AAPSMQSLVGTLSDLVDPINLQIYMPHLQTAASLCWSACHTSLSLLFEGEIATQHGTSASAASMTPGGAVGSLSSFVPLVTKVRRFEILPLPLDAVRLLPANGKTRMRRSQGQASSDSGAGGEDGADSSTQARGMHAGRQALAGLMDQVGSVGSVLSAQNVNVQSVLGAASLFLGGRTRRGD 3238
            +V+ E+ALEHMSVEKAW+LL  LSSQVV KQ+ELQLMVGSRYHELIESADSIVSMKE  AEVL LLR FPQACSNVL QVP   +P G  DL G D+ + A    + E +QLMLHAPA MWAALD+N+VLEA+NL+L+CRSSW ++S++    VD  +AAFLR H+TYVEQFP+RI+ AG R LTR  +T++TAGALTA+LQL+A ++A PLRCLLELLL RRGGAVVAMLTRATK     ++E +L  +V TVQ+TI+DVHAIF+    G C L + AH SC +    RL+A D KD+CT WL+VL PKIR F + LL A G+TN+LA IRG+LW +TH +  W + A      G   A    +W  A +F +DVS +  D   +G+       V  P LDLW+L FS IFA+LAEALLKDSL  IRRDVE RLDSILL IT    GQG       S ++    PH   ALMAH+ILAA++AVVSLLTSEIR+L+ DA  LTERGD+ AADAL+TSFYLL VDMAAGLANH R+ LQEIH+CI+ AA+QE      GG   +LE+AV  FADA L+IGRVAWML+GRSG PLQ ALT P+ FAQ  RGR+E+QQLEAAFVIADTNGDG+VD +EAAEALQAVSFG+ A   +DP+ Y+S T+ EFFLFATRLLEEQ P  HL  CLD +L +SLAVWSEWALE+ A LL  GC+ +  LC +PGMT+DLWRQ HGIWEDKTIELDRDDGDG+QET+HFP+M+SPA+LCYIEGVAAELSRILST+DL    +  SC    T + Q S    ++     + G    Q   R ARSLAA RASSDL  ALV LC+G  +AA+QACEAA LQLLLDALFLQKWVSD+  ++PSM+S+V TL DLVDPINLQIYMPHLQTAAS CW+ACHT LSL+FE  I +   ++ S+AS++P GA+GS SSF+PL  KVRRFEILPL L+ VRL   NG +R R S G  S    +G  DG  +S QARG+ AGRQALAGL       GSVLSAQN +VQSV GAASLFLGGR RRG+
Sbjct:    1 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGAEVLGLLRKFPQACSNVLQQVPSSLSP-GTSDLSGTDVREDAAARHVMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGVDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTQETAGALTAILQLQALEDANPLRCLLELLLLRRGGAVVAMLTRATKEENSSDIEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSCRSQASLRLSAHDAKDMCTTWLSVLTPKIRVFGERLLRATGDTNSLARIRGSLWKVTHGDGAWATPAAGTRAGGSIRAVQGLMWMEATSFAVDVSAW--DGGTNGSTRAWGQDVSSPQLDLWSLLFSQIFADLAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQEARSFSGSHRQEQPH---ALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAVSSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRYASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWS-APGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPKSSPSMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSS--SAPSSASVSPDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASG--DGPGASAQARGLEAGRQALAGL-------GSVLSAQNAHVQSVFGAASLFLGGRNRRGE 1050          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: W7TQZ7_9STRA (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQZ7_9STRA)

HSP 1 Score: 123 bits (308), Expect = 1.440e-24
Identity = 218/934 (23.34%), Postives = 346/934 (37.04%), Query Frame = 2
Query:  119 MSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSM------------KEISAEVLDLL---------RGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCR----------SSWAEVSTS--CFGDVDPSL------------AAFLRSHLTYVEQFP-----QRIILAGVRALTRPSST---EKTAGALTALLQLE-AHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQE------VEDILRKSVATVQKTILDVHAIF--SQRSGGDCWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHAN----------------------------CEWVSSAPEESTAGLAHADMQTVWTRAV-----------------AFTIDVSTFREDADVDGTVKP----PSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITGGQGRLPVHGTSAYANPNPHRSRALMAHEILAASEAVVSLLTSEIRHLSEDAWSLTERGDEAAADALRTSFYLLCVDMAAGLANHFRLTLQE-----------------IHSCIRGAAKQECGIALDGGARELEDAVGRFADAALVIGRVAWMLSGRSGRPLQSALT-----------------CPSSFAQNLR----------GRV---EQQQLEAAFVIADTNGDGIVDADEAAEALQAVSFGSCADHVLDPTSY--SSLTITEFFLFATRLLEEQIPLDHLICCLDDVLVKS----LAVWSEWALERPAT-LLAIGCDDLATLCC---SPGMTD---DLWRQTHGIWEDKTIELDRDDGDGVQETIHFPVMISPALLCYIEGVAAELSRILSTSD 2407
            ++VE+    +  LS  +  KQ+E+QL+VGSRYHELIESAD+++ M             E+   V DLL         R + +  +  + Q        G   L              E +  MLHAP  +W A+DA R L A++     +          +S A  +TS       D S+            A   +  L    Q+      +  I++G  AL    +     +   AL +L +L+ A         L+ L L RRG  + A+         E +      V   L ++V  +++T+LD H +F   + SG        A     A+   R A R + +  T WL     K+   +   L  + +++ LA +R  LW  THA+                            C  V   PE     L+ A++   W                     A +      R  A V G V        LD+WA  FS+ FA + E L + S+  + +    + + IL V++          +S  ++ +  + R   A E+  A++ +   L   +R +   A  L + GDEAAA AL +S +   + + + L++  R  LQE                 IH      A      +L         +     DA L++ R AW L   + R L S  +                 C S    N++          G+V   +  QLE+AF IAD+ G+G +   E  E L  +     +     P+SY  SS T  E  L     L+E  P D     L D   ++    L  W+   +      +L  G   L        + GM     D  R     WE++ +  + ++G  +++ I  P   SP L  +   +AAEL R+    D
Sbjct:   12 LTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPL------------TREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESG--------ASEEDQALRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHASLVGPGLGEDGQREQSGRSPKGVRLWREACRAVIH-PESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVS----------SSPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSLT------PPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTLGLSQASSS--PPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQD 906          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA)

HSP 1 Score: 114 bits (285), Expect = 7.590e-22
Identity = 118/415 (28.43%), Postives = 177/415 (42.65%), Query Frame = 2
Query:   71 PGDGEMVVTAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVL---GQV-----------PFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCRS-------SWAEVSTSCF-----GDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSSTEKTAGALTALLQLEAH-------------KEAEPLRCLLELLLRRRGGAVVAMLTRATKAGA--------EQEVEDILRKSVATVQKTILDVHAIF---SQRSGGDCWLVESAHSSCTAMGRWRLAAR---------------------DIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALT 1102
            P    + V  E+ALE+ + E A  LL K +  V  KQ+EL+ MV SRYHELIESADS+V+M+++++EVL LL   P  C ++L    QV           P +P  +G        D  A        ++LML+APA +W+ALDA  +LEA+ + ++C +       + A+ S         G VD   AAF+++    + QFP RI    +  L+R S+      AL AL+ L  H                +         L  R  A+ A L R  + GA        ++  E  L  +V  ++ T+LDVHA F   + RS     L  S                                     + + + +QWL  L P++   +  +L        LA +R  LW +T
Sbjct:   26 PPSTHVTVPIERALEYATAEDARALLVKAAEDVGVKQAELRGMVSSRYHELIESADSVVAMQQLTSEVLSLLDALPTDCRHLLKLGAQVLEPHHLEDQHPPRKPLQTG------KSDSSAVSANQDSTVRLMLNAPAAIWSALDAGHLLEAATIFMRCAAVMRGGAAAAADQSVPLVQQLRQGSVD---AAFVQAQWACMLQFPARISHTALALLSR-SAAAAAVDALAALVLLHDHLPHGSNGDSSSGNDSGDAYHHAFRTFLAAREAAIAAAL-RGARGGAAADGSVPADRSRERALCAAVQLLRATLLDVHAAFVTGTLRSRVAAALEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGEGEWRRVLSQWLAALLPRVHRRAAAVLGGAHGAAELAAVREALWTVT 429          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A7S3YF54_HETAK (Conserved oligomeric Golgi complex subunit 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF54_HETAK)

HSP 1 Score: 74.3 bits (181), Expect = 7.980e-12
Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2
Query:   98 AEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVP 331
            AEK LE + +E+   +L   +  V  KQ+ELQLMVGSRYHE+I+SADSIV MKE   +V++LL  FP+    ++  VP
Sbjct:   46 AEKILESLPIEEVQRMLKDSNRNVQTKQTELQLMVGSRYHEIIDSADSIVEMKEEVQQVVELLIAFPKDYKGLVENVP 123          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A6B0REB2_9CETA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Bos mutus TaxID=72004 RepID=A0A6B0REB2_9CETA)

HSP 1 Score: 76.3 bits (186), Expect = 3.810e-10
Identity = 93/388 (23.97%), Postives = 159/388 (40.98%), Query Frame = 2
Query:  113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCRSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSST----------------EKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIF--------------------------SQR-SGGDCWLVESAHSSCT-------AMGRWRLAARDI---------KDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWAL 1099
            E    E+   L  ++ +++ HK+ EL+ MVG RY +LIE+AD+I  M+  +A ++D +R   Q C+ +       P P           +  + M  +  I+L+L  P  +W++++A+R L A+ L L C          C+      L +    H   + +FP  I++  V A +   ST                +  A AL +++ LE   E+ P + L + LL R+  A +  L      GA  + +  +   V  +  T+   HA+F                          SQ  SG   W+++     C+       ++  ++ A R +         KD   +W++V    IR     LL  V +T  LA IR  +W L
Sbjct:   23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAAGLVDAVRATDQYCARLRQAGSAAPRPXXXXXXXXXSQEKFYSM--AAQIKLLLEIPEKIWSSMEASRYLHATQLYLLC----------CYLHKLLQLESSSSRHSPVLSRFP--ILIRQVAAASHFRSTILHESKMLLKCQAVSDQAVAEALCSIMLLE---ESSPRQALTDFLLARK--AAIQKLLNQPHHGAGIKAQ--ICSLVELLATTLNQAHALFYTLPEGLLPDPLLPCGLLFSTLDSITSQHPSGKGVWVLQDEMKLCSWFKHLPASVVEFQPALRTLAHPISQEYLKDTLQKWIHVCNEDIRNGISSLLMYVTSTKGLAGIRDAVWGL 389          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: UPI000847D017 (conserved oligomeric Golgi complex subunit 1 isoform X3 n=1 Tax=Capra hircus TaxID=9925 RepID=UPI000847D017)

HSP 1 Score: 75.9 bits (185), Expect = 3.860e-10
Identity = 90/377 (23.87%), Postives = 165/377 (43.77%), Query Frame = 2
Query:  113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKC----RSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPS-STEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGG-------DCWLVESAHSSCTAM---GRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHANCEWVSSAPEESTAGLAHADMQTVWTRAVA 1198
            E    E+   L  ++ +++ HK+ EL+ MVG RY +LIE+AD+I  M+  +A ++D +R   Q C+ +       P P           +  + M  +  I+L+L  P  +W++++++R L A+ L L C    +    E S+S    V       +R  +     F   I+      L R + S +  A AL +++ LE   E+ P + L + LL R+  A +  L      GA  + +  +   V  +  T+   HA+F     G        C L+ S   S T+    G+     +D   LC+ + ++ AP + F  +  L  + +  +  +++ TL        +W+    E+   G++   M    T+ +A
Sbjct:   23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAAGLVDAVRATDQYCARLRRAGSAAPRPXXXXXXXXXSQEKFYSM--AAQIKLLLEIPEKIWSSMESSRFLHAAQLYLLCCCLHKLLQLESSSSRHSPVLSRFPILIRQ-VAAASHFRSTILHESKMLLKRQAVSDQAVAEALCSVMLLE---ESSPRQALTDFLLARK--AAIQKLLNQPHHGAGIKAQ--ICSLVELLATTLSQAHALFYTLPEGLLPDPSLPCGLLFSTLDSITSQHPSGKGVGVLQDEMKLCSWFKHLPAPVVEF--QPALRTLAHPISQEYLKDTLQ-------KWIHVCNEDIRNGISSLLMYVTSTKGLA 380          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: UPI001AADDB6F (conserved oligomeric Golgi complex subunit 1 isoform X1 n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AADDB6F)

HSP 1 Score: 74.7 bits (182), Expect = 9.780e-10
Identity = 100/373 (26.81%), Postives = 167/373 (44.77%), Query Frame = 2
Query:  113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLS---EAIQLMLHAPAGMWAALDANRVLEASNLLLKC--RSSWAEVSTSCFGDVDPSLAAF--LRSHLTYVEQFPQRIILAGVRALTRPSSTEKTAG-ALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIF-------SQRSGGDCWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGN----TNTLAH------IRGTLWALTHANCEWVSSAPEESTAGL 1156
            E  S E+   L  K+ +++ HK+ EL+ MVG RY +LIE+AD+I  M+  + +VL  +RG    C    G +  +P P     L  D      + R S     I+L+L  P  MW++++++R L A+ L L C    S  ++ +S      P LA F  L   +     F   I+      L  PS++++    AL +++ LE   ++ P + L + LL R+ G  +  L      G+   ++  +   V  +  T+   HA+F          S  +C L+ S   + TA    +   + IK L  +  +V       +SKHL  +V +      TLAH      +R TL        +W+S   E+  +G+
Sbjct:   17 EAHSAEEIRVLEKKVRAEIEHKKEELRQMVGERYRDLIEAADTIGEMRRSAEQVLGAVRGLETYC----GGLRAKPGP-----LQKDRRGAQSQERFSCMASQIKLLLEIPEKMWSSMESSRYLHATQLYLLCCHLHSLLQLDSSP-SRYSPVLARFPILIRQVAAAGTFRATILQESKSLLKCPSASDQAVTEALCSIMMLE---DSSPRQALADFLLARKAG--IQQLLNQPHHGSS--IKSQVCSLVELLANTLYQAHALFYTTPDDVPPNSSLNCGLLFSMLETVTAQ---QGGGKGIKVLREEMKSVS------WSKHLPRSVMDFQPTLRTLAHPINQDYLRETLQ-------QWISMCNEDIKSGI 356          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A2P6MVW1_9EUKA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVW1_9EUKA)

HSP 1 Score: 74.7 bits (182), Expect = 1.000e-9
Identity = 96/450 (21.33%), Postives = 185/450 (41.11%), Query Frame = 2
Query:   95 TAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEA--IQLMLHAPAGMWAALDANRVLEASNLLLKCRSSWAEVS----TSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSS--TEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGD--CWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHANCEWVSSAPEESTAGLAHADMQTVWTRAVAFTIDVSTFREDADVDGT---VKPPSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITGGQG 1405
            T  K    +SVE+  +    +  +   ++ EL+++VG+RY +LI+SAD+IV M+E+S E    +      C  VLG        S  G +    +K       S A  I++++  P  +W  ++ NR LEAS L L+ + +   +           +  S+   L    T + QFP +I+ +G RA  +  +   E+ +  L ++L L +      L  L +  L+ R    +  L   +KA  +  +   L   V  +Q +I     +F+  +       + ES           +L    + +L   +++    ++R     LL  + +   L  +  +L +      E      +  T G    D   +               ED++ D     V    +DLW ++F  +F +  +A++++    I   ++ +L S+L  ++  +G
Sbjct:  150 TVNKLFNTLSVEEIRSKEMNMRKETEERRQELRVLVGARYRDLIDSADTIVEMRELSKEAYQKMNRVETGCKKVLGLREDSLLASTTGKME---EKNLRRGNTSTAKKIKILVDTPEQIWREIENNRYLEASQLYLRAKETHQSMEGASDAKTIASIHGSIPLLLHQWST-ISQFPPKILESG-RAHEKSGTLPVEQHSDTLASILLLSS----SDLPSLCKEFLQSRLSCALDSLKSDSKASNQSGILQQLNSVVYVLQSSIEHTEILFTSDATNKRGAMINESLSKVGHKKEDLQLDRTTLNELTKAFIDQSCQQVRVGGGELLKKIESAKVLRDMEISLKSNISKEAEL-----KTKTRGSVSLDSAAI---------------EDSEWDKMCTRVCGTKVDLWEVYFRQLFVDRFKAIIREKFHSI--GIQSKLKSVLSHVSEDKG 568          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A6I9KFN2_CHRAS (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9KFN2_CHRAS)

HSP 1 Score: 73.2 bits (178), Expect = 2.900e-9
Identity = 92/377 (24.40%), Postives = 153/377 (40.58%), Query Frame = 2
Query:  113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKC----RSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRAL-TRPSSTEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGD-------CWLVESA-------HSSCTAMG---------RW---------------RLAARDI-----KDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWAL 1099
            E    E+   L  ++ +++ HK+ EL+ MVG RY +LIE+AD+I  M+  +  ++  +R   Q C+ +    P    P    ++     +  + M  +  I+L+L  P  MW+AL+A+  L A+ L L C    R    + STS    V       +R  +T    F   I+      L ++  S +  A AL +++ LE   E+ P + L + LL R+  A +  L +  + G   + +  +   + T   T+   H +F     G        C L+ S        H +   +G          W               R  A  I     KD   +W+++ +  IR     LL  V N   LA  R  +W L
Sbjct:   23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRHSAEGLVGAVRATDQYCARLRQAEPAGTRPPQAPEVSPPSREKFYSM--AAQIKLLLETPEKMWSALEASHYLHATQLYLLCCHLHRLLHLDTSTSPHSPVLSRFPILIRQ-VTAASHFRSTILHESKTLLQSQAVSDQAVAEALCSIMLLE---ESSPRQALTDFLLARK--AAIQKLLQQPQQGVSTKTQVCMLVELLTA--TLSQAHTLFYTLPEGQLPDPSLPCGLLFSTLETVTGQHPAGKGLGVLQEGMKLCSWFKHLPASVVEFQPVLRTLAHPISQEYLKDTLQKWIHICSEDIRNGLTGLLMFVKNMKGLAGARDAIWEL 389          
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: UPI0003F05F21 (conserved oligomeric Golgi complex subunit 1 n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F05F21)

HSP 1 Score: 73.2 bits (178), Expect = 2.910e-9
Identity = 88/376 (23.40%), Postives = 150/376 (39.89%), Query Frame = 2
Query:  113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNL-LLKCRSSWAEVSTSCFGDVDPSLAAF--LRSHLTYVEQFPQRIILAGVRALTRPSSTEKT-AGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGD-------CWLVESAHSSCTAMGR----------------W---------------RLAARDI-----KDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWAL 1099
            E    E+   L  ++ +++ HK+ EL+ MVG RY +LIE+AD+I  M+  +  ++D +R   Q C+ +    P    P          +K      ++  I+L+L  P  MW+A++A++ L A+ L LL C        +S      P L+ F  L   +     F   I+      L   +  ++  A AL +++ LE   E+ P + L + LL R+      +       GA+ ++  ++     T+ +     HA+F     G        C L+ S   + T                    W               R  A  I     KD   +W+++ +  IR    +LL  V N   LA +R  +W L
Sbjct:   23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAEGLVDAVRATDQYCARLRQADPAALRPPPXXXXXXXQEKF---YSMAAQIKLLLEIPEKMWSAMEASQYLHATQLCLLCCHLHGLLQLSSSRAQHSPVLSRFPILIQQVAAASHFRSAILHESKMLLKCQAVPDQAVAEALCSIMLLE---ESSPRQALTDFLLARKAAIQKLLNQPPHDGGAKAQICSLVELMATTLNQA----HALFYSLPEGQLPDPSLPCGLLFSTLETITGQSSSGKGIAVLQEGMKLCSWFRYLPPSIIEFQPTLRTPAHPISQEFLKDTLQKWIHMCSEDIRHGLANLLELVKNMKGLAEVRDAMWGL 388          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FW61_ECTSI0.000e+062.36Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
W7TQZ7_9STRA1.440e-2423.34Conserved oligomeric Golgi complex subunit 1 n=2 T... [more]
A0A836CMC2_9STRA7.590e-2228.43Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
A0A7S3YF54_HETAK7.980e-1250.00Conserved oligomeric Golgi complex subunit 1 (Frag... [more]
A0A6B0REB2_9CETA3.810e-1023.97Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
UPI000847D0173.860e-1023.87conserved oligomeric Golgi complex subunit 1 isofo... [more]
UPI001AADDB6F9.780e-1026.81conserved oligomeric Golgi complex subunit 1 isofo... [more]
A0A2P6MVW1_9EUKA1.000e-921.33Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
A0A6I9KFN2_CHRAS2.900e-924.40Conserved oligomeric Golgi complex subunit 1 n=1 T... [more]
UPI0003F05F212.910e-923.40conserved oligomeric Golgi complex subunit 1 n=1 T... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3166contigH-paniculata_contig3166:12581..18259 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score1186.8
Seed ortholog evalue0.0
Seed eggNOG ortholog2880.D7FW61
Hectar predicted targeting categoryother localisation
EggNOG free text desc.Vps51/Vps67
EggNOG OGs2E98P@1,2SFMQ@2759
Ec32 ortholog descriptionconserved unknown protein
Ec32 orthologEc-01_003520.1
COG Functional cat.S
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
Exons5
Model size3570
Cds size3207
Stop1
Start1
Relationships

The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929975.7741318-UTR-H-paniculata_contig3166:12580..126351622929975.7741318-UTR-H-paniculata_contig3166:12580..12635Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3166 12581..12635 +
1691481094.299196-UTR-H-paniculata_contig3166:12580..126351691481094.299196-UTR-H-paniculata_contig3166:12580..12635Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3166 12581..12635 +
1622929975.8951213-UTR-H-paniculata_contig3166:17951..182591622929975.8951213-UTR-H-paniculata_contig3166:17951..18259Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3166 17952..18259 +
1691481094.3573616-UTR-H-paniculata_contig3166:17951..182591691481094.3573616-UTR-H-paniculata_contig3166:17951..18259Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3166 17952..18259 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929975.7901268-CDS-H-paniculata_contig3166:12635..127731622929975.7901268-CDS-H-paniculata_contig3166:12635..12773Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 12636..12773 +
1691481094.3092217-CDS-H-paniculata_contig3166:12635..127731691481094.3092217-CDS-H-paniculata_contig3166:12635..12773Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 12636..12773 +
1622929975.8101647-CDS-H-paniculata_contig3166:13048..131801622929975.8101647-CDS-H-paniculata_contig3166:13048..13180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 13049..13180 +
1691481094.3177388-CDS-H-paniculata_contig3166:13048..131801691481094.3177388-CDS-H-paniculata_contig3166:13048..13180Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 13049..13180 +
1622929975.8459525-CDS-H-paniculata_contig3166:14372..144561622929975.8459525-CDS-H-paniculata_contig3166:14372..14456Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 14373..14456 +
1691481094.3262682-CDS-H-paniculata_contig3166:14372..144561691481094.3262682-CDS-H-paniculata_contig3166:14372..14456Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 14373..14456 +
1622929975.865133-CDS-H-paniculata_contig3166:14961..152751622929975.865133-CDS-H-paniculata_contig3166:14961..15275Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 14962..15275 +
1691481094.3383512-CDS-H-paniculata_contig3166:14961..152751691481094.3383512-CDS-H-paniculata_contig3166:14961..15275Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 14962..15275 +
1622929975.8783264-CDS-H-paniculata_contig3166:15412..179511622929975.8783264-CDS-H-paniculata_contig3166:15412..17951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 15413..17951 +
1691481094.3496668-CDS-H-paniculata_contig3166:15412..179511691481094.3496668-CDS-H-paniculata_contig3166:15412..17951Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3166 15413..17951 +


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3166.8534.1prot_H-paniculata_contig3166.8534.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3166 12636..17951 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3166.8534.1

>prot_H-paniculata_contig3166.8534.1 ID=prot_H-paniculata_contig3166.8534.1|Name=mRNA_H-paniculata_contig3166.8534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1069bp
MEANFPGDGEMVVTAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVG
SRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGI
GDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCR
SSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSST
EKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAE
QEVEDILRKSVATVQKTILDVHAIFSQRSGGDCWLVESAHSSCTAMGRWR
LAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTH
ANCEWVSSAPEESTAGLAHADMQTVWTRAVAFTIDVSTFREDADVDGTVK
PPSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITGGQG
RLPVHGTSAYANPNPHRSRALMAHEILAASEAVVSLLTSEIRHLSEDAWS
LTERGDEAAADALRTSFYLLCVDMAAGLANHFRLTLQEIHSCIRGAAKQE
CGIALDGGARELEDAVGRFADAALVIGRVAWMLSGRSGRPLQSALTCPSS
FAQNLRGRVEQQQLEAAFVIADTNGDGIVDADEAAEALQAVSFGSCADHV
LDPTSYSSLTITEFFLFATRLLEEQIPLDHLICCLDDVLVKSLAVWSEWA
LERPATLLAIGCDDLATLCCSPGMTDDLWRQTHGIWEDKTIELDRDDGDG
VQETIHFPVMISPALLCYIEGVAAELSRILSTSDLIAASCVKKHTVNRQE
SARGGQSANHEHSRGTTPSQETTRRARSLAASRASSDLKKALVVLCDGLQ
AAASQACEAAHLQLLLDALFLQKWVSDNAAAPSMQSLVGTLSDLVDPINL
QIYMPHLQTAASLCWSACHTSLSLLFEGEIATQHGTSASAASMTPGGAVG
SLSSFVPLVTKVRRFEILPLPLDAVRLLPANGKTRMRRSQGQASSDSGAG
GEDGADSSTQARGMHAGRQALAGLMDQVGSVGSVLSAQNVNVQSVLGAAS
LFLGGRTRRGDGEEVREF*
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mRNA from alignment at H-paniculata_contig3166:12581..18259+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3166.8534.1 ID=mRNA_H-paniculata_contig3166.8534.1|Name=mRNA_H-paniculata_contig3166.8534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5679bp|location=Sequence derived from alignment at H-paniculata_contig3166:12581..18259+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
CAGTTTCCGTCCAACCTCGCTCGCATCTCGTACGTGATTTTCTGCCTGTA CAGCTATGGAAGCAAATTTTCCAGGCGATGGTGAGATGGTGGTGACTGCT GAAAAGGCGTTGGAGCATATGTCTGTGGAGAAGGCATGGAATCTTCTGGC TAAGCTGTCTTCCCAAGTCGTCCATAAACAGAGCGAACTACAGGTATTGT CTGTAGCTCTTGCGGAATAACCTAGCACCGACAGACATGACGGACACTAT CTATACCACACCGTCAAGTGCACGTAAGACGGGACAGTCAGTATACACAA AGAATGTTGGTAGAATGGGAAGCTTGCAAGATCAAGGACTAGGTATATCA GATCCGTTGTTCCTCGAAGATGTCAACATTCCCTCAAGTACCGCTGTTTC TCTCGCCTGCTGTCGTTGTTATGCTGGCTGTCTGTTCATGGTTGCCATGC AACAACGGAACGCAACAGCTGATGGTGGGCTCCCGGTATCACGAGCTAAT TGAATCGGCGGACAGCATTGTGTCCATGAAAGAGATCAGTGCAGAGGTGC TTGACCTTCTCCGGGGCTTTCCACAGGCATGCTCGAACGTGCTCGGGCAG GTAAGTAGATGTGCTACTTGGCAATGTTGTTGTGCCATCCAGTAGCGAAA TCTATTTCGGAACAAAAAACACACTTCACAGCGGGCATCGAGTGCTGTAT TTAGTCGGTGTGTCGTTGTAGGCAGGATCATACTGACTTCCCACCTGTGC TGTATGCACTACTGTGTACTTGACTGTCTGTCTGAGCTCGAAAGCGGCCT TTAGTGACTGCTAGGGCATATTTAAACAAAATCTAAGCTATTTTATTTGT CGAGGAATCTACTGTAGCTGGTTTGTGGAAAAATCTGCAATCTTCATAGC TATCATGACTCTCATGTGAAAGGCCCCAGCTTGCGTTGGTTAACGTGGCA TGGTTTCTGTGGCCGCGGTGAATCGCGGAAGATATCCGCTATCTAATGGA AATTATTCCTGGGACTGGAGAAATTTGTTTTTTGTCAACGTACCTCCACA ACCTAGCAACGGTGGTAACGTACTTGCTAACTGACTGTTACAGCACAAGT ATTTTGAGAGTAAAACGTATCACATCAATATTAATATACTACTCTAGTGC TGCTGGAAATACCCTCAGCGCCTGTAATTTTGAAATTGATACTGTCTGTA GTACTAGTTGGTACCCAGCATTTATCTTTTAGGAGTTTCGGATTACATGC TGGTGTACTGGAGATATAATGTAGTATGTTGGGGATTTCTACGGGTGATA CTTGGAATGCACTCAATATTTTGCTGGGTTTGTAGTGGCGATGCTTGTCG TTCCAGTGTATTTATTGCCAGGAAATCATACTGTGGTTCTGAGTTATCGG AGTATTGCTGCAAAGTACTGGACATATACCTACTATTTTTGGGAATACAT ACTGGTGATACTTGAGATTGCGTGATATTTTCGATATGGCAGTGATTGGT ACTGAGTACCCACTCTGATACCAGGTACTGAATTTGGTGAAGTGCTGGCA GTCTACAGTGTATTTGTCTTGTACTACGACGATCTGTGCAGCCTAGGGGT GTGTGCCCCAGCGAGCGGACTTTGGGATTTTTTGGACATATATTTCCAGT AGTATGCCAGCTTTATACACAAGGCCGGTTGTATCTTTTTTGCGGTACTG GGCCTACTTTAAAAAAGCTGTGACCGTGCTGATTGATGCATCTGCTTATA ACCCAAGCGCCAGTGGCATTTTTTCATCCCTCTATCCAACAGGTCCCGTT CGAGCCGACTCCATCGGGCATTGGCGACCTAGGCGTGGACATGGATAAAG GGGCGCATGAGATGCGGCTGTCTGAAGTAAGTTGAGATGGCAGCAATACT GACGAGCTTGTAGAGTGCATTTGCACGTTTGAAATCCTTGCATGTGCCAG CAAGTAAAAGATATATGAGGCCGAATCTACCTGGTTTGTGCAATTCGTGT ATCACATCCGTCGGTAGTAGGCATGTCGGGTTAGTGGTAGTTGCATCTGC TCAGTGTTGCCTTGGGCGTCCAATGATTTAATATTCGGACATTATCTTGC GCAGAAAGGATTTAGTAAATCCCGACAGTGATTTAGAGTACGTACAATCC AGAGTGTAAATATTGGGACCAAAGAAAACGCACGCGCTCTCAGCTACTCA GCTACACTGAGTACCTCCCTCGACTGAGGGGTTTGTACGCGACCTAGGTG GCAACACCCACATTGATCAAACTGTTAGGGTAGTCTTGACTAATGAGAAT AGTTGAGAGTGAGGTATCGGCAATGTCACTCATCCATACGTAATAGAAGT CGAAATACCTGTTCCCGTTGTTTTCGAGCAGGCGATACAATTGATGCTGC ACGCGCCTGCGGGCATGTGGGCAGCGTTGGATGCAAACAGGGTTCTCGAG GCATCGAATCTTCTATTGAAGTGCAGGAGCAGCTGGGCTGAAGTATCCAC GTCTTGCTTTGGTGACGTTGATCCGAGTTTGGCTGCTTTCCTGCGTAGTC ATCTGACCTACGTGGAACAATTTCCTCAACGGATCATTTTGGCGGGTGTA CGCGCGCTTACACGCCCCTCTAGTACAGAGAAGACCGCAGGAGCACTTAC GGCATTGCTACAACTCGAAGCACACAAAGAAGCAGAGCCGTTGCGGTGAG AATACGCGAGATCTATAGTGTCTTCAAACCTATGGTTTATGCTTATTCGT TTTCGTACAAGTTTTGGCCACTGTCTACATAGTCATAAGTATGGCAATCA AATAACCAAAGCAACCCTTTACTCGATTGCAGGTGCTTACTGGAGCTTCT GCTTCGGCGAAGAGGTGGCGCTGTAGTGGCTATGCTGACTCGAGCAACCA AAGCAGGAGCTGAACAGGAGGTGGAGGACATTTTGCGGAAATCTGTGGCT ACAGTACAGAAAACGATTTTAGATGTGCATGCCATATTTTCCCAAAGGTC AGGTGGCGACTGTTGGTTAGTGGAGTCTGCCCACTCATCGTGCACAGCTA TGGGAAGATGGAGATTGGCAGCACGCGATATCAAGGACCTTTGCACGCAG TGGCTGAATGTGTTGGCGCCTAAGATACGTTTCTTCAGCAAGCATCTTCT CAGTGCTGTAGGCAATACGAACACTCTAGCGCATATCCGCGGAACTTTGT GGGCACTCACTCATGCAAACTGCGAGTGGGTTTCGTCTGCCCCTGAGGAG TCCACCGCGGGTCTCGCCCACGCTGATATGCAGACCGTATGGACAAGGGC AGTGGCTTTCACGATCGACGTCTCGACCTTCCGCGAGGATGCGGATGTCG ATGGAACCGTTAAGCCCCCTTCACTGGATTTGTGGGCGCTTTTCTTCAGT AGTATCTTTGCTGAGCTGGCGGAGGCGTTGTTGAAAGACTCCTTACTTTG CATTCGTCGAGATGTAGAGCATCGCCTTGACTCCATTCTTTTAGTCATCA CAGGGGGTCAGGGAAGACTTCCTGTGCATGGCACAAGTGCCTACGCCAAC CCTAACCCACACCGATCCCGTGCACTCATGGCACACGAGATCCTAGCAGC ATCGGAGGCAGTCGTTTCTTTGCTTACCTCAGAGATTCGACATCTCTCTG AAGATGCATGGAGTCTAACGGAGCGTGGAGATGAGGCTGCTGCAGATGCG CTTAGAACCTCATTTTATCTCCTCTGTGTTGACATGGCAGCCGGCCTAGC GAATCATTTTCGCCTGACTCTGCAAGAAATACACTCTTGCATCAGAGGAG CAGCGAAGCAGGAATGCGGTATTGCGCTTGATGGTGGAGCACGGGAGCTG GAGGACGCCGTCGGAAGATTCGCTGATGCAGCCCTTGTGATAGGCCGTGT GGCTTGGATGTTGAGCGGCCGAAGCGGGCGTCCGTTGCAATCGGCCTTGA CGTGTCCTAGTTCATTTGCCCAAAACTTGCGAGGACGCGTTGAACAACAG CAACTGGAGGCAGCGTTCGTAATTGCCGACACAAACGGCGACGGCATCGT TGACGCAGATGAGGCAGCGGAAGCGCTCCAGGCTGTTTCGTTCGGGTCAT GTGCGGATCATGTACTTGATCCCACATCGTACTCATCCTTGACCATCACC GAGTTCTTCTTGTTTGCCACGCGGTTGCTGGAGGAGCAAATACCTCTTGA TCACTTGATCTGTTGTCTTGACGACGTTCTCGTCAAGTCATTGGCTGTAT GGTCGGAGTGGGCGTTGGAACGCCCTGCGACGCTACTCGCGATTGGCTGC GATGATTTGGCTACCCTCTGCTGCAGTCCTGGGATGACAGATGACTTGTG GCGGCAGACCCACGGTATTTGGGAAGACAAGACGATCGAGCTTGACCGGG ACGACGGAGACGGAGTGCAAGAGACGATACACTTTCCCGTTATGATATCT CCGGCGTTGTTATGCTACATCGAAGGTGTGGCGGCTGAGCTCAGTCGCAT ACTCAGTACATCAGATCTCATAGCTGCGTCTTGCGTGAAGAAGCACACCG TTAATCGGCAAGAAAGTGCGCGTGGTGGGCAGTCGGCTAACCATGAGCAT TCACGAGGCACCACTCCGTCCCAAGAAACCACGCGTCGAGCACGATCCCT GGCAGCAAGTCGAGCCTCGAGCGATTTGAAGAAAGCGCTCGTTGTACTGT GCGATGGACTACAAGCAGCGGCATCACAAGCCTGTGAGGCTGCACACCTG CAGCTGCTGTTGGATGCACTGTTTTTGCAGAAGTGGGTCTCGGATAACGC CGCAGCCCCTTCGATGCAATCGCTCGTTGGAACTCTTTCTGATCTGGTGG ATCCCATCAATCTGCAGATATATATGCCGCACCTTCAGACAGCCGCATCA CTGTGTTGGTCAGCATGTCACACGTCATTATCTCTCCTTTTTGAGGGAGA AATTGCAACACAGCATGGCACGTCTGCGTCAGCGGCTTCGATGACACCTG GTGGTGCTGTAGGCTCGTTGTCCAGCTTTGTTCCTCTAGTTACCAAGGTT CGCCGGTTTGAAATCCTCCCACTTCCGCTGGACGCAGTGCGATTGTTGCC CGCGAATGGGAAAACGCGTATGAGGCGCTCGCAGGGGCAAGCGTCATCTG ATTCTGGAGCGGGTGGGGAAGACGGGGCGGATTCCTCTACCCAGGCAAGG GGTATGCACGCGGGTAGACAGGCTTTAGCGGGGCTGATGGATCAAGTTGG TAGCGTAGGCAGCGTCCTAAGCGCGCAAAATGTAAACGTTCAGAGTGTGT TGGGCGCGGCATCTCTCTTCTTGGGTGGGAGAACACGCAGAGGTGACGGC GAAGAGGTTAGAGAATTCTAACGCTTGGCTATTTTGTGCTTTGGCAATGA CAGATGCAGCAGCTACACTGAATGTCTACAAGAAGAGGTGTGCACACCCC GATTGAGGAACGGCACTAGGTTTATTCATTCACCATCCATATTCTTGGTT GAATTTTTGTTACGTCGTCACGTCACCACTATGTATGTAGACTTACTCCT CTTCCAGCGGATATCCCAAATGTTTGGTGTCGAGGGTTCAGGGACCTCGC GAATTATTTGCTTTGCAATTACTTGAATAAAGAGATTTTTGAGGCATCTC GCGGAAGCTATAATGTATCAAAATCAAAC
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Coding sequence (CDS) from alignment at H-paniculata_contig3166:12581..18259+

>mRNA_H-paniculata_contig3166.8534.1 ID=mRNA_H-paniculata_contig3166.8534.1|Name=mRNA_H-paniculata_contig3166.8534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6414bp|location=Sequence derived from alignment at H-paniculata_contig3166:12581..18259+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAAGCAAATTTTCCAGGCGATGGTGAGATGGTGGTGACTGCTGAAAA
GGCGTTGGAGCATATGTCTGTGGAGAAGGCATGGAATCTTCTGGCTAAGC
TGTCTTCCCAAGTCGTCCATAAACAGAGCGAACTACAGATGGAAGCAAAT
TTTCCAGGCGATGGTGAGATGGTGGTGACTGCTGAAAAGGCGTTGGAGCA
TATGTCTGTGGAGAAGGCATGGAATCTTCTGGCTAAGCTGTCTTCCCAAG
TCGTCCATAAACAGAGCGAACTACAGCTGATGGTGGGCTCCCGGTATCAC
GAGCTAATTGAATCGGCGGACAGCATTGTGTCCATGAAAGAGATCAGTGC
AGAGGTGCTTGACCTTCTCCGGGGCTTTCCACAGGCATGCTCGAACGTGC
TCGGGCAGCTGATGGTGGGCTCCCGGTATCACGAGCTAATTGAATCGGCG
GACAGCATTGTGTCCATGAAAGAGATCAGTGCAGAGGTGCTTGACCTTCT
CCGGGGCTTTCCACAGGCATGCTCGAACGTGCTCGGGCAGGTCCCGTTCG
AGCCGACTCCATCGGGCATTGGCGACCTAGGCGTGGACATGGATAAAGGG
GCGCATGAGATGCGGCTGTCTGAAGTCCCGTTCGAGCCGACTCCATCGGG
CATTGGCGACCTAGGCGTGGACATGGATAAAGGGGCGCATGAGATGCGGC
TGTCTGAAGCGATACAATTGATGCTGCACGCGCCTGCGGGCATGTGGGCA
GCGTTGGATGCAAACAGGGTTCTCGAGGCATCGAATCTTCTATTGAAGTG
CAGGAGCAGCTGGGCTGAAGTATCCACGTCTTGCTTTGGTGACGTTGATC
CGAGTTTGGCTGCTTTCCTGCGTAGTCATCTGACCTACGTGGAACAATTT
CCTCAACGGATCATTTTGGCGGGTGTACGCGCGCTTACACGCCCCTCTAG
TACAGAGAAGACCGCAGGAGCACTTACGGCATTGCTACAACTCGAAGCAC
ACAAAGAAGCAGAGCCGTTGCGGCGATACAATTGATGCTGCACGCGCCTG
CGGGCATGTGGGCAGCGTTGGATGCAAACAGGGTTCTCGAGGCATCGAAT
CTTCTATTGAAGTGCAGGAGCAGCTGGGCTGAAGTATCCACGTCTTGCTT
TGGTGACGTTGATCCGAGTTTGGCTGCTTTCCTGCGTAGTCATCTGACCT
ACGTGGAACAATTTCCTCAACGGATCATTTTGGCGGGTGTACGCGCGCTT
ACACGCCCCTCTAGTACAGAGAAGACCGCAGGAGCACTTACGGCATTGCT
ACAACTCGAAGCACACAAAGAAGCAGAGCCGTTGCGGTGCTTACTGGAGC
TTCTGCTTCGGCGAAGAGGTGGCGCTGTAGTGGCTATGCTGACTCGAGCA
ACCAAAGCAGGAGCTGAACAGGAGGTGGAGGACATTTTGCGGAAATCTGT
GGCTACAGTACAGAAAACGATTTTAGATGTGCATGCCATATTTTCCCAAA
GGTCAGGTGGCGACTGTTGGTTAGTGGAGTCTGCCCACTCATCGTGCACA
GCTATGGGAAGATGGAGATTGGCAGCACGCGATATCAAGGACCTTTGCAC
GCAGTGGCTGAATGTGTTGGCGCCTAAGATACGTTTCTTCAGCAAGCATC
TTCTCAGTGCTGTAGGCAATACGAACACTCTAGCGCATATCCGCGGAACT
TTGTGGGCACTCACTCATGCAAACTGCGAGTGGGTTTCGTCTGCCCCTGA
GGAGTCCACCGCGGGTCTCGCCCACGCTGATATGCAGACCGTATGGACAA
GGGCAGTGGCTTTCACGATCGACGTCTCGACCTTCCGCGAGGATGCGGAT
GTCGATGGAACCGTTAAGCCCCCTTCACTGGATTTGTGGGCGCTTTTCTT
CAGTAGTATCTTTGCTGAGCTGGCGGAGGCGTTGTTGAAAGACTCCTTAC
TTTGCATTCGTCGAGATGTAGAGCATCGCCTTGACTCCATTCTTTTAGTC
ATCACAGGGGGTCAGGGAAGACTTCCTGTGCATGGCACAAGTGCCTACGC
CAACCCTAACCCACACCGATCCCGTGCACTCATGGCACACGAGATCCTAG
CAGCATCGGAGGCAGTCGTTTCTTTGCTTACCTCAGAGATTCGACATCTC
TCTGAAGATGCATGGAGTCTAACGGAGCGTGGAGATGAGGCTGCTGCAGA
TGCGCTTAGAACCTCATTTTATCTCCTCTGTGTTGACATGGCAGCCGGCC
TAGCGAATCATTTTCGCCTGACTCTGCAAGAAATACACTCTTGCATCAGA
GGAGCAGCGAAGCAGGAATGCGGTATTGCGCTTGATGGTGGAGCACGGGA
GCTGGAGGACGCCGTCGGAAGATTCGCTGATGCAGCCCTTGTGATAGGCC
GTGTGGCTTGGATGTTGAGCGGCCGAAGCGGGCGTCCGTTGCAATCGGCC
TTGACGTGTCCTAGTTCATTTGCCCAAAACTTGCGAGGACGCGTTGAACA
ACAGCAACTGGAGGCAGCGTTCGTAATTGCCGACACAAACGGCGACGGCA
TCGTTGACGCAGATGAGGCAGCGGAAGCGCTCCAGGCTGTTTCGTTCGGG
TCATGTGCGGATCATGTACTTGATCCCACATCGTACTCATCCTTGACCAT
CACCGAGTTCTTCTTGTTTGCCACGCGGTTGCTGGAGGAGCAAATACCTC
TTGATCACTTGATCTGTTGTCTTGACGACGTTCTCGTCAAGTCATTGGCT
GTATGGTCGGAGTGGGCGTTGGAACGCCCTGCGACGCTACTCGCGATTGG
CTGCGATGATTTGGCTACCCTCTGCTGCAGTCCTGGGATGACAGATGACT
TGTGGCGGCAGACCCACGGTATTTGGGAAGACAAGACGATCGAGCTTGAC
CGGGACGACGGAGACGGAGTGCAAGAGACGATACACTTTCCCGTTATGAT
ATCTCCGGCGTTGTTATGCTACATCGAAGGTGTGGCGGCTGAGCTCAGTC
GCATACTCAGTACATCAGATCTCATAGCTGCGTCTTGCGTGAAGAAGCAC
ACCGTTAATCGGCAAGAAAGTGCGCGTGGTGGGCAGTCGGCTAACCATGA
GCATTCACGAGGCACCACTCCGTCCCAAGAAACCACGCGTCGAGCACGAT
CCCTGGCAGCAAGTCGAGCCTCGAGCGATTTGAAGAAAGCGCTCGTTGTA
CTGTGCGATGGACTACAAGCAGCGGCATCACAAGCCTGTGAGGCTGCACA
CCTGCAGCTGCTGTTGGATGCACTGTTTTTGCAGAAGTGGGTCTCGGATA
ACGCCGCAGCCCCTTCGATGCAATCGCTCGTTGGAACTCTTTCTGATCTG
GTGGATCCCATCAATCTGCAGATATATATGCCGCACCTTCAGACAGCCGC
ATCACTGTGTTGGTCAGCATGTCACACGTCATTATCTCTCCTTTTTGAGG
GAGAAATTGCAACACAGCATGGCACGTCTGCGTCAGCGGCTTCGATGACA
CCTGGTGGTGCTGTAGGCTCGTTGTCCAGCTTTGTTCCTCTAGTTACCAA
GGTTCGCCGGTTTGAAATCCTCCCACTTCCGCTGGACGCAGTGCGATTGT
TGCCCGCGAATGGGAAAACGCGTATGAGGCGCTCGCAGGGGCAAGCGTCA
TCTGATTCTGGAGCGGGTGGGGAAGACGGGGCGGATTCCTCTACCCAGGC
AAGGGGTATGCACGCGGGTAGACAGGCTTTAGCGGGGCTGATGGATCAAG
TTGGTAGCGTAGGCAGCGTCCTAAGCGCGCAAAATGTAAACGTTCAGAGT
GTGTTGGGCGCGGCATCTCTCTTCTTGGGTGGGAGAACACGCAGAGGTGA
CGGCGAAGAGGTTAGAGAATTCTAAGTGCTTACTGGAGCTTCTGCTTCGG
CGAAGAGGTGGCGCTGTAGTGGCTATGCTGACTCGAGCAACCAAAGCAGG
AGCTGAACAGGAGGTGGAGGACATTTTGCGGAAATCTGTGGCTACAGTAC
AGAAAACGATTTTAGATGTGCATGCCATATTTTCCCAAAGGTCAGGTGGC
GACTGTTGGTTAGTGGAGTCTGCCCACTCATCGTGCACAGCTATGGGAAG
ATGGAGATTGGCAGCACGCGATATCAAGGACCTTTGCACGCAGTGGCTGA
ATGTGTTGGCGCCTAAGATACGTTTCTTCAGCAAGCATCTTCTCAGTGCT
GTAGGCAATACGAACACTCTAGCGCATATCCGCGGAACTTTGTGGGCACT
CACTCATGCAAACTGCGAGTGGGTTTCGTCTGCCCCTGAGGAGTCCACCG
CGGGTCTCGCCCACGCTGATATGCAGACCGTATGGACAAGGGCAGTGGCT
TTCACGATCGACGTCTCGACCTTCCGCGAGGATGCGGATGTCGATGGAAC
CGTTAAGCCCCCTTCACTGGATTTGTGGGCGCTTTTCTTCAGTAGTATCT
TTGCTGAGCTGGCGGAGGCGTTGTTGAAAGACTCCTTACTTTGCATTCGT
CGAGATGTAGAGCATCGCCTTGACTCCATTCTTTTAGTCATCACAGGGGG
TCAGGGAAGACTTCCTGTGCATGGCACAAGTGCCTACGCCAACCCTAACC
CACACCGATCCCGTGCACTCATGGCACACGAGATCCTAGCAGCATCGGAG
GCAGTCGTTTCTTTGCTTACCTCAGAGATTCGACATCTCTCTGAAGATGC
ATGGAGTCTAACGGAGCGTGGAGATGAGGCTGCTGCAGATGCGCTTAGAA
CCTCATTTTATCTCCTCTGTGTTGACATGGCAGCCGGCCTAGCGAATCAT
TTTCGCCTGACTCTGCAAGAAATACACTCTTGCATCAGAGGAGCAGCGAA
GCAGGAATGCGGTATTGCGCTTGATGGTGGAGCACGGGAGCTGGAGGACG
CCGTCGGAAGATTCGCTGATGCAGCCCTTGTGATAGGCCGTGTGGCTTGG
ATGTTGAGCGGCCGAAGCGGGCGTCCGTTGCAATCGGCCTTGACGTGTCC
TAGTTCATTTGCCCAAAACTTGCGAGGACGCGTTGAACAACAGCAACTGG
AGGCAGCGTTCGTAATTGCCGACACAAACGGCGACGGCATCGTTGACGCA
GATGAGGCAGCGGAAGCGCTCCAGGCTGTTTCGTTCGGGTCATGTGCGGA
TCATGTACTTGATCCCACATCGTACTCATCCTTGACCATCACCGAGTTCT
TCTTGTTTGCCACGCGGTTGCTGGAGGAGCAAATACCTCTTGATCACTTG
ATCTGTTGTCTTGACGACGTTCTCGTCAAGTCATTGGCTGTATGGTCGGA
GTGGGCGTTGGAACGCCCTGCGACGCTACTCGCGATTGGCTGCGATGATT
TGGCTACCCTCTGCTGCAGTCCTGGGATGACAGATGACTTGTGGCGGCAG
ACCCACGGTATTTGGGAAGACAAGACGATCGAGCTTGACCGGGACGACGG
AGACGGAGTGCAAGAGACGATACACTTTCCCGTTATGATATCTCCGGCGT
TGTTATGCTACATCGAAGGTGTGGCGGCTGAGCTCAGTCGCATACTCAGT
ACATCAGATCTCATAGCTGCGTCTTGCGTGAAGAAGCACACCGTTAATCG
GCAAGAAAGTGCGCGTGGTGGGCAGTCGGCTAACCATGAGCATTCACGAG
GCACCACTCCGTCCCAAGAAACCACGCGTCGAGCACGATCCCTGGCAGCA
AGTCGAGCCTCGAGCGATTTGAAGAAAGCGCTCGTTGTACTGTGCGATGG
ACTACAAGCAGCGGCATCACAAGCCTGTGAGGCTGCACACCTGCAGCTGC
TGTTGGATGCACTGTTTTTGCAGAAGTGGGTCTCGGATAACGCCGCAGCC
CCTTCGATGCAATCGCTCGTTGGAACTCTTTCTGATCTGGTGGATCCCAT
CAATCTGCAGATATATATGCCGCACCTTCAGACAGCCGCATCACTGTGTT
GGTCAGCATGTCACACGTCATTATCTCTCCTTTTTGAGGGAGAAATTGCA
ACACAGCATGGCACGTCTGCGTCAGCGGCTTCGATGACACCTGGTGGTGC
TGTAGGCTCGTTGTCCAGCTTTGTTCCTCTAGTTACCAAGGTTCGCCGGT
TTGAAATCCTCCCACTTCCGCTGGACGCAGTGCGATTGTTGCCCGCGAAT
GGGAAAACGCGTATGAGGCGCTCGCAGGGGCAAGCGTCATCTGATTCTGG
AGCGGGTGGGGAAGACGGGGCGGATTCCTCTACCCAGGCAAGGGGTATGC
ACGCGGGTAGACAGGCTTTAGCGGGGCTGATGGATCAAGTTGGTAGCGTA
GGCAGCGTCCTAAGCGCGCAAAATGTAAACGTTCAGAGTGTGTTGGGCGC
GGCATCTCTCTTCTTGGGTGGGAGAACACGCAGAGGTGACGGCGAAGAGG
TTAGAGAATTCTAA
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