mRNA_H-paniculata_contig3166.8534.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: D7FW61_ECTSI (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FW61_ECTSI) HSP 1 Score: 1171 bits (3029), Expect = 0.000e+0 Identity = 666/1068 (62.36%), Postives = 793/1068 (74.25%), Query Frame = 2
Query: 89 VVTAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDL-GVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCRSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSSTEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGDCWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHANCEWVSSAPEESTAGLAHADMQTVWTRAVAFTIDVSTFREDADVDGT-------VKPPSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITG---GQGRLPVHGTS-AYANPNPHRSRALMAHEILAASEAVVSLLTSEIRHLSEDAWSLTERGDEAAADALRTSFYLLCVDMAAGLANHFRLTLQEIHSCIRGAAKQECGIALDGGA-RELEDAVGRFADAALVIGRVAWMLSGRSGRPLQSALTCPSSFAQNLRGRVEQQQLEAAFVIADTNGDGIVDADEAAEALQAVSFGSCADHVLDPTSYSSLTITEFFLFATRLLEEQIPLDHLICCLDDVLVKSLAVWSEWALERPATLLAIGCDDLATLCCSPGMTDDLWRQTHGIWEDKTIELDRDDGDGVQETIHFPVMISPALLCYIEGVAAELSRILSTSDL----IAASCVKKHTVNRQESARGGQSANHEHSRGTTPSQETTRRARSLAASRASSDLKKALVVLCDGLQAAASQACEAAHLQLLLDALFLQKWVSDNA-AAPSMQSLVGTLSDLVDPINLQIYMPHLQTAASLCWSACHTSLSLLFEGEIATQHGTSASAASMTPGGAVGSLSSFVPLVTKVRRFEILPLPLDAVRLLPANGKTRMRRSQGQASSDSGAGGEDGADSSTQARGMHAGRQALAGLMDQVGSVGSVLSAQNVNVQSVLGAASLFLGGRTRRGD 3238
+V+ E+ALEHMSVEKAW+LL LSSQVV KQ+ELQLMVGSRYHELIESADSIVSMKE AEVL LLR FPQACSNVL QVP +P G DL G D+ + A + E +QLMLHAPA MWAALD+N+VLEA+NL+L+CRSSW ++S++ VD +AAFLR H+TYVEQFP+RI+ AG R LTR +T++TAGALTA+LQL+A ++A PLRCLLELLL RRGGAVVAMLTRATK ++E +L +V TVQ+TI+DVHAIF+ G C L + AH SC + RL+A D KD+CT WL+VL PKIR F + LL A G+TN+LA IRG+LW +TH + W + A G A +W A +F +DVS + D +G+ V P LDLW+L FS IFA+LAEALLKDSL IRRDVE RLDSILL IT GQG S ++ PH ALMAH+ILAA++AVVSLLTSEIR+L+ DA LTERGD+ AADAL+TSFYLL VDMAAGLANH R+ LQEIH+CI+ AA+QE GG +LE+AV FADA L+IGRVAWML+GRSG PLQ ALT P+ FAQ RGR+E+QQLEAAFVIADTNGDG+VD +EAAEALQAVSFG+ A +DP+ Y+S T+ EFFLFATRLLEEQ P HL CLD +L +SLAVWSEWALE+ A LL GC+ + LC +PGMT+DLWRQ HGIWEDKTIELDRDDGDG+QET+HFP+M+SPA+LCYIEGVAAELSRILST+DL + SC T + Q S ++ + G Q R ARSLAA RASSDL ALV LC+G +AA+QACEAA LQLLLDALFLQKWVSD+ ++PSM+S+V TL DLVDPINLQIYMPHLQTAAS CW+ACHT LSL+FE I + ++ S+AS++P GA+GS SSF+PL KVRRFEILPL L+ VRL NG +R R S G S +G DG +S QARG+ AGRQALAGL GSVLSAQN +VQSV GAASLFLGGR RRG+
Sbjct: 1 MVSPERALEHMSVEKAWSLLDTLSSQVVGKQTELQLMVGSRYHELIESADSIVSMKETGAEVLGLLRKFPQACSNVLQQVPSSLSP-GTSDLSGTDVREDAAARHVMEVVQLMLHAPAAMWAALDSNKVLEAANLVLRCRSSWTDLSSTFSTGVDSGVAAFLRGHVTYVEQFPRRILSAGTRLLTRSCNTQETAGALTAILQLQALEDANPLRCLLELLLLRRGGAVVAMLTRATKEENSSDIEQVLHAAVTTVQRTIVDVHAIFAPGRNGSCMLEDLAHPSCRSQASLRLSAHDAKDMCTTWLSVLTPKIRVFGERLLRATGDTNSLARIRGSLWKVTHGDGAWATPAAGTRAGGSIRAVQGLMWMEATSFAVDVSAW--DGGTNGSTRAWGQDVSSPQLDLWSLLFSQIFADLAEALLKDSLASIRRDVECRLDSILLAITRNETGQGVQEARSFSGSHRQEQPH---ALMAHDILAAADAVVSLLTSEIRNLAGDATCLTERGDQTAADALKTSFYLLSVDMAAGLANHLRIALQEIHACIKSAAEQERRCVPYGGRIGDLENAVSSFADAGLLIGRVAWMLNGRSGGPLQYALTPPACFAQRRRGRIEEQQLEAAFVIADTNGDGVVDTEEAAEALQAVSFGASAALAVDPSRYASFTLNEFFLFATRLLEEQRPRQHLTSCLDTLLSESLAVWSEWALEKSAALLTEGCNAMVILCANPGMTNDLWRQAHGIWEDKTIELDRDDGDGIQETVHFPIMVSPAILCYIEGVAAELSRILSTADLTERAVTESCSGWKTQDAQPSGDEERALGWS-APGKATGQGAARYARSLAAVRASSDLSHALVGLCEGAHSAAAQACEAAQLQLLLDALFLQKWVSDSPKSSPSMESVVTTLCDLVDPINLQIYMPHLQTAASACWAACHTPLSLIFEQAIPSS--SAPSSASVSPDGALGSSSSFIPLAPKVRRFEILPLSLEVVRLQHPNGSSRSRNSVGIKSGAPASG--DGPGASAQARGLEAGRQALAGL-------GSVLSAQNAHVQSVFGAASLFLGGRNRRGE 1050
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: W7TQZ7_9STRA (Conserved oligomeric Golgi complex subunit 1 n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7TQZ7_9STRA) HSP 1 Score: 123 bits (308), Expect = 1.440e-24 Identity = 218/934 (23.34%), Postives = 346/934 (37.04%), Query Frame = 2
Query: 119 MSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSM------------KEISAEVLDLL---------RGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCR----------SSWAEVSTS--CFGDVDPSL------------AAFLRSHLTYVEQFP-----QRIILAGVRALTRPSST---EKTAGALTALLQLE-AHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQE------VEDILRKSVATVQKTILDVHAIF--SQRSGGDCWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHAN----------------------------CEWVSSAPEESTAGLAHADMQTVWTRAV-----------------AFTIDVSTFREDADVDGTVKP----PSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITGGQGRLPVHGTSAYANPNPHRSRALMAHEILAASEAVVSLLTSEIRHLSEDAWSLTERGDEAAADALRTSFYLLCVDMAAGLANHFRLTLQE-----------------IHSCIRGAAKQECGIALDGGARELEDAVGRFADAALVIGRVAWMLSGRSGRPLQSALT-----------------CPSSFAQNLR----------GRV---EQQQLEAAFVIADTNGDGIVDADEAAEALQAVSFGSCADHVLDPTSY--SSLTITEFFLFATRLLEEQIPLDHLICCLDDVLVKS----LAVWSEWALERPAT-LLAIGCDDLATLCC---SPGMTD---DLWRQTHGIWEDKTIELDRDDGDGVQETIHFPVMISPALLCYIEGVAAELSRILSTSD 2407
++VE+ + LS + KQ+E+QL+VGSRYHELIESAD+++ M E+ V DLL R + + + + Q G L E + MLHAP +W A+DA R L A++ + +S A +TS D S+ A + L Q+ + I++G AL + + AL +L +L+ A L+ L L RRG + A+ E + V L ++V +++T+LD H +F + SG A A+ R A R + + T WL K+ + L + +++ LA +R LW THA+ C V PE L+ A++ W A + R A V G V LD+WA FS+ FA + E L + S+ + + + + IL V++ +S ++ + + R A E+ A++ + L +R + A L + GDEAAA AL +S + + + + L++ R LQE IH A +L + DA L++ R AW L + R L S + C S N++ G+V + QLE+AF IAD+ G+G + E E L + + P+SY SS T E L L+E P D L D ++ L W+ + +L G L + GM D R WE++ + + ++G +++ I P SP L + +AAEL R+ D
Sbjct: 12 LTVERVRREMKTLSEGIQAKQTEIQLIVGSRYHELIESADAVLDMCKSCNNLQHILTMEVPPVVADLLQEKRLHSHLRPWREVAAAAIAQQQERQQQPGAFPL------------TREDVVYMLHAPTRLWEAMDAGRYLAAASTWTTAKDIADKIAEQAASAASTNTSNPALSSGDDSIRDDEEGRMRKWTATQRQVQLVIGNQWACLKDLKSSIISGAHALLADQNVLDVRQHGLALVSLARLDDAIASGARETGLVTLFLERRGQWLEALSGEGGGVHGEDKETLSGHVLSKLTRAVQALKRTVLDAHTLFIVGEESG--------ASEEDQALRDLRRAGRIVAEATTAWLGGWLVKVHSQAHRSLKTLKSSSDLARVRKALWQETHASLVGPGLGEDGQREQSGRSPKGVRLWREACRAVIH-PESLRQALSKANLPCCWVSTPSLDGATEEKGRSEPGERASSAHAFAHRSRASVLGHVAVVGANDGLDVWASLFSTSFAAMLEDLFQASMTSLYQTWVGKFERILSVVS----------SSPSSSSSLGQDRRFTAIEMAWAADHLYCCLVKGLRQIHRHARELVQDGDEAAAAALGSSLHAQTLSLLSRLSSFSRSWLQEWDGRCPLSSPSTLNQQSIHQDALSPASLPSSSSLT------PPSCPSDMDAVLILARFAWRLLTTAPRTLLSPFSPVEPPIPDPLDASEDSVCNSGSRMNVKESRRRGSGTSGKVRSIDMVQLESAFTIADSRGEGELTPAELHECLDTLGLSQASSS--PPSSYPPSSATFAEVVLLCYAALDEDQPADPATAYLQDAFGRTFDLGLRAWARHTVRSLGERVLGEGGQGLGLEGAERRNGGMESRDKDSVRSRRPGWEERVLVQEDEEGRPLEDRIWIPTTPSPPLSVFCFSLAAELGRVAQGQD 906
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A836CMC2_9STRA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CMC2_9STRA) HSP 1 Score: 114 bits (285), Expect = 7.590e-22 Identity = 118/415 (28.43%), Postives = 177/415 (42.65%), Query Frame = 2
Query: 71 PGDGEMVVTAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVL---GQV-----------PFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCRS-------SWAEVSTSCF-----GDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSSTEKTAGALTALLQLEAH-------------KEAEPLRCLLELLLRRRGGAVVAMLTRATKAGA--------EQEVEDILRKSVATVQKTILDVHAIF---SQRSGGDCWLVESAHSSCTAMGRWRLAAR---------------------DIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALT 1102
P + V E+ALE+ + E A LL K + V KQ+EL+ MV SRYHELIESADS+V+M+++++EVL LL P C ++L QV P +P +G D A ++LML+APA +W+ALDA +LEA+ + ++C + + A+ S G VD AAF+++ + QFP RI + L+R S+ AL AL+ L H + L R A+ A L R + GA ++ E L +V ++ T+LDVHA F + RS L S + + + +QWL L P++ + +L LA +R LW +T
Sbjct: 26 PPSTHVTVPIERALEYATAEDARALLVKAAEDVGVKQAELRGMVSSRYHELIESADSVVAMQQLTSEVLSLLDALPTDCRHLLKLGAQVLEPHHLEDQHPPRKPLQTG------KSDSSAVSANQDSTVRLMLNAPAAIWSALDAGHLLEAATIFMRCAAVMRGGAAAAADQSVPLVQQLRQGSVD---AAFVQAQWACMLQFPARISHTALALLSR-SAAAAAVDALAALVLLHDHLPHGSNGDSSSGNDSGDAYHHAFRTFLAAREAAIAAAL-RGARGGAAADGSVPADRSRERALCAAVQLLRATLLDVHAAFVTGTLRSRVAAALEASGSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPGEGEWRRVLSQWLAALLPRVHRRAAAVLGGAHGAAELAAVREALWTVT 429
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A7S3YF54_HETAK (Conserved oligomeric Golgi complex subunit 1 (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YF54_HETAK) HSP 1 Score: 74.3 bits (181), Expect = 7.980e-12 Identity = 39/78 (50.00%), Postives = 53/78 (67.95%), Query Frame = 2
Query: 98 AEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVP 331
AEK LE + +E+ +L + V KQ+ELQLMVGSRYHE+I+SADSIV MKE +V++LL FP+ ++ VP
Sbjct: 46 AEKILESLPIEEVQRMLKDSNRNVQTKQTELQLMVGSRYHEIIDSADSIVEMKEEVQQVVELLIAFPKDYKGLVENVP 123
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A6B0REB2_9CETA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Bos mutus TaxID=72004 RepID=A0A6B0REB2_9CETA) HSP 1 Score: 76.3 bits (186), Expect = 3.810e-10 Identity = 93/388 (23.97%), Postives = 159/388 (40.98%), Query Frame = 2
Query: 113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKCRSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSST----------------EKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIF--------------------------SQR-SGGDCWLVESAHSSCT-------AMGRWRLAARDI---------KDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWAL 1099
E E+ L ++ +++ HK+ EL+ MVG RY +LIE+AD+I M+ +A ++D +R Q C+ + P P + + M + I+L+L P +W++++A+R L A+ L L C C+ L + H + +FP I++ V A + ST + A AL +++ LE E+ P + L + LL R+ A + L GA + + + V + T+ HA+F SQ SG W+++ C+ ++ ++ A R + KD +W++V IR LL V +T LA IR +W L
Sbjct: 23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAAGLVDAVRATDQYCARLRQAGSAAPRPXXXXXXXXXSQEKFYSM--AAQIKLLLEIPEKIWSSMEASRYLHATQLYLLC----------CYLHKLLQLESSSSRHSPVLSRFP--ILIRQVAAASHFRSTILHESKMLLKCQAVSDQAVAEALCSIMLLE---ESSPRQALTDFLLARK--AAIQKLLNQPHHGAGIKAQ--ICSLVELLATTLNQAHALFYTLPEGLLPDPLLPCGLLFSTLDSITSQHPSGKGVWVLQDEMKLCSWFKHLPASVVEFQPALRTLAHPISQEYLKDTLQKWIHVCNEDIRNGISSLLMYVTSTKGLAGIRDAVWGL 389
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: UPI000847D017 (conserved oligomeric Golgi complex subunit 1 isoform X3 n=1 Tax=Capra hircus TaxID=9925 RepID=UPI000847D017) HSP 1 Score: 75.9 bits (185), Expect = 3.860e-10 Identity = 90/377 (23.87%), Postives = 165/377 (43.77%), Query Frame = 2
Query: 113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKC----RSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPS-STEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGG-------DCWLVESAHSSCTAM---GRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHANCEWVSSAPEESTAGLAHADMQTVWTRAVA 1198
E E+ L ++ +++ HK+ EL+ MVG RY +LIE+AD+I M+ +A ++D +R Q C+ + P P + + M + I+L+L P +W++++++R L A+ L L C + E S+S V +R + F I+ L R + S + A AL +++ LE E+ P + L + LL R+ A + L GA + + + V + T+ HA+F G C L+ S S T+ G+ +D LC+ + ++ AP + F + L + + + +++ TL +W+ E+ G++ M T+ +A
Sbjct: 23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAAGLVDAVRATDQYCARLRRAGSAAPRPXXXXXXXXXSQEKFYSM--AAQIKLLLEIPEKIWSSMESSRFLHAAQLYLLCCCLHKLLQLESSSSRHSPVLSRFPILIRQ-VAAASHFRSTILHESKMLLKRQAVSDQAVAEALCSVMLLE---ESSPRQALTDFLLARK--AAIQKLLNQPHHGAGIKAQ--ICSLVELLATTLSQAHALFYTLPEGLLPDPSLPCGLLFSTLDSITSQHPSGKGVGVLQDEMKLCSWFKHLPAPVVEF--QPALRTLAHPISQEYLKDTLQ-------KWIHVCNEDIRNGISSLLMYVTSTKGLA 380
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: UPI001AADDB6F (conserved oligomeric Golgi complex subunit 1 isoform X1 n=2 Tax=Rana temporaria TaxID=8407 RepID=UPI001AADDB6F) HSP 1 Score: 74.7 bits (182), Expect = 9.780e-10 Identity = 100/373 (26.81%), Postives = 167/373 (44.77%), Query Frame = 2
Query: 113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLS---EAIQLMLHAPAGMWAALDANRVLEASNLLLKC--RSSWAEVSTSCFGDVDPSLAAF--LRSHLTYVEQFPQRIILAGVRALTRPSSTEKTAG-ALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIF-------SQRSGGDCWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGN----TNTLAH------IRGTLWALTHANCEWVSSAPEESTAGL 1156
E S E+ L K+ +++ HK+ EL+ MVG RY +LIE+AD+I M+ + +VL +RG C G + +P P L D + R S I+L+L P MW++++++R L A+ L L C S ++ +S P LA F L + F I+ L PS++++ AL +++ LE ++ P + L + LL R+ G + L G+ ++ + V + T+ HA+F S +C L+ S + TA + + IK L + +V +SKHL +V + TLAH +R TL +W+S E+ +G+
Sbjct: 17 EAHSAEEIRVLEKKVRAEIEHKKEELRQMVGERYRDLIEAADTIGEMRRSAEQVLGAVRGLETYC----GGLRAKPGP-----LQKDRRGAQSQERFSCMASQIKLLLEIPEKMWSSMESSRYLHATQLYLLCCHLHSLLQLDSSP-SRYSPVLARFPILIRQVAAAGTFRATILQESKSLLKCPSASDQAVTEALCSIMMLE---DSSPRQALADFLLARKAG--IQQLLNQPHHGSS--IKSQVCSLVELLANTLYQAHALFYTTPDDVPPNSSLNCGLLFSMLETVTAQ---QGGGKGIKVLREEMKSVS------WSKHLPRSVMDFQPTLRTLAHPINQDYLRETLQ-------QWISMCNEDIKSGI 356
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A2P6MVW1_9EUKA (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Planoprotostelium fungivorum TaxID=1890364 RepID=A0A2P6MVW1_9EUKA) HSP 1 Score: 74.7 bits (182), Expect = 1.000e-9 Identity = 96/450 (21.33%), Postives = 185/450 (41.11%), Query Frame = 2
Query: 95 TAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEA--IQLMLHAPAGMWAALDANRVLEASNLLLKCRSSWAEVS----TSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRALTRPSS--TEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGD--CWLVESAHSSCTAMGRWRLAARDIKDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWALTHANCEWVSSAPEESTAGLAHADMQTVWTRAVAFTIDVSTFREDADVDGT---VKPPSLDLWALFFSSIFAELAEALLKDSLLCIRRDVEHRLDSILLVITGGQG 1405
T K +SVE+ + + + ++ EL+++VG+RY +LI+SAD+IV M+E+S E + C VLG S G + +K S A I++++ P +W ++ NR LEAS L L+ + + + + S+ L T + QFP +I+ +G RA + + E+ + L ++L L + L L + L+ R + L +KA + + L V +Q +I +F+ + + ES +L + +L +++ ++R LL + + L + +L + E + T G D + ED++ D V +DLW ++F +F + +A++++ I ++ +L S+L ++ +G
Sbjct: 150 TVNKLFNTLSVEEIRSKEMNMRKETEERRQELRVLVGARYRDLIDSADTIVEMRELSKEAYQKMNRVETGCKKVLGLREDSLLASTTGKME---EKNLRRGNTSTAKKIKILVDTPEQIWREIENNRYLEASQLYLRAKETHQSMEGASDAKTIASIHGSIPLLLHQWST-ISQFPPKILESG-RAHEKSGTLPVEQHSDTLASILLLSS----SDLPSLCKEFLQSRLSCALDSLKSDSKASNQSGILQQLNSVVYVLQSSIEHTEILFTSDATNKRGAMINESLSKVGHKKEDLQLDRTTLNELTKAFIDQSCQQVRVGGGELLKKIESAKVLRDMEISLKSNISKEAEL-----KTKTRGSVSLDSAAI---------------EDSEWDKMCTRVCGTKVDLWEVYFRQLFVDRFKAIIREKFHSI--GIQSKLKSVLSHVSEDKG 568
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: A0A6I9KFN2_CHRAS (Conserved oligomeric Golgi complex subunit 1 n=1 Tax=Chrysochloris asiatica TaxID=185453 RepID=A0A6I9KFN2_CHRAS) HSP 1 Score: 73.2 bits (178), Expect = 2.900e-9 Identity = 92/377 (24.40%), Postives = 153/377 (40.58%), Query Frame = 2
Query: 113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNLLLKC----RSSWAEVSTSCFGDVDPSLAAFLRSHLTYVEQFPQRIILAGVRAL-TRPSSTEKTAGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGD-------CWLVESA-------HSSCTAMG---------RW---------------RLAARDI-----KDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWAL 1099
E E+ L ++ +++ HK+ EL+ MVG RY +LIE+AD+I M+ + ++ +R Q C+ + P P ++ + + M + I+L+L P MW+AL+A+ L A+ L L C R + STS V +R +T F I+ L ++ S + A AL +++ LE E+ P + L + LL R+ A + L + + G + + + + T T+ H +F G C L+ S H + +G W R A I KD +W+++ + IR LL V N LA R +W L
Sbjct: 23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRHSAEGLVGAVRATDQYCARLRQAEPAGTRPPQAPEVSPPSREKFYSM--AAQIKLLLETPEKMWSALEASHYLHATQLYLLCCHLHRLLHLDTSTSPHSPVLSRFPILIRQ-VTAASHFRSTILHESKTLLQSQAVSDQAVAEALCSIMLLE---ESSPRQALTDFLLARK--AAIQKLLQQPQQGVSTKTQVCMLVELLTA--TLSQAHTLFYTLPEGQLPDPSLPCGLLFSTLETVTGQHPAGKGLGVLQEGMKLCSWFKHLPASVVEFQPVLRTLAHPISQEYLKDTLQKWIHICSEDIRNGLTGLLMFVKNMKGLAGARDAIWEL 389
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Match: UPI0003F05F21 (conserved oligomeric Golgi complex subunit 1 n=1 Tax=Elephantulus edwardii TaxID=28737 RepID=UPI0003F05F21) HSP 1 Score: 73.2 bits (178), Expect = 2.910e-9 Identity = 88/376 (23.40%), Postives = 150/376 (39.89%), Query Frame = 2
Query: 113 EHMSVEKAWNLLAKLSSQVVHKQSELQLMVGSRYHELIESADSIVSMKEISAEVLDLLRGFPQACSNVLGQVPFEPTPSGIGDLGVDMDKGAHEMRLSEAIQLMLHAPAGMWAALDANRVLEASNL-LLKCRSSWAEVSTSCFGDVDPSLAAF--LRSHLTYVEQFPQRIILAGVRALTRPSSTEKT-AGALTALLQLEAHKEAEPLRCLLELLLRRRGGAVVAMLTRATKAGAEQEVEDILRKSVATVQKTILDVHAIFSQRSGGD-------CWLVESAHSSCTAMGR----------------W---------------RLAARDI-----KDLCTQWLNVLAPKIRFFSKHLLSAVGNTNTLAHIRGTLWAL 1099
E E+ L ++ +++ HK+ EL+ MVG RY +LIE+AD+I M+ + ++D +R Q C+ + P P +K ++ I+L+L P MW+A++A++ L A+ L LL C +S P L+ F L + F I+ L + ++ A AL +++ LE E+ P + L + LL R+ + GA+ ++ ++ T+ + HA+F G C L+ S + T W R A I KD +W+++ + IR +LL V N LA +R +W L
Sbjct: 23 ETHGAEEIRGLERQVRAEIEHKKEELRQMVGERYRDLIEAADTIGQMRRCAEGLVDAVRATDQYCARLRQADPAALRPPPXXXXXXXQEKF---YSMAAQIKLLLEIPEKMWSAMEASQYLHATQLCLLCCHLHGLLQLSSSRAQHSPVLSRFPILIQQVAAASHFRSAILHESKMLLKCQAVPDQAVAEALCSIMLLE---ESSPRQALTDFLLARKAAIQKLLNQPPHDGGAKAQICSLVELMATTLNQA----HALFYSLPEGQLPDPSLPCGLLFSTLETITGQSSSGKGIAVLQEGMKLCSWFRYLPPSIIEFQPTLRTPAHPISQEFLKDTLQKWIHMCSEDIRHGLANLLELVKNMKGLAEVRDAMWGL 388 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3166.8534.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3166.8534.1 >prot_H-paniculata_contig3166.8534.1 ID=prot_H-paniculata_contig3166.8534.1|Name=mRNA_H-paniculata_contig3166.8534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=1069bp MEANFPGDGEMVVTAEKALEHMSVEKAWNLLAKLSSQVVHKQSELQLMVGback to top mRNA from alignment at H-paniculata_contig3166:12581..18259+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3166.8534.1 ID=mRNA_H-paniculata_contig3166.8534.1|Name=mRNA_H-paniculata_contig3166.8534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=5679bp|location=Sequence derived from alignment at H-paniculata_contig3166:12581..18259+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3166:12581..18259+ >mRNA_H-paniculata_contig3166.8534.1 ID=mRNA_H-paniculata_contig3166.8534.1|Name=mRNA_H-paniculata_contig3166.8534.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=6414bp|location=Sequence derived from alignment at H-paniculata_contig3166:12581..18259+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |