mRNA_H-paniculata_contig31550.8515.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: A0A6H5KYW9_9PHAE (CULLIN_2 domain-containing protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KYW9_9PHAE) HSP 1 Score: 100 bits (248), Expect = 1.160e-22 Identity = 52/73 (71.23%), Postives = 60/73 (82.19%), Query Frame = 1
Query: 7 QVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
+VEEYLAKVVQLFSYLTDKDLFAEIYRNQLA+RLLN RSASDDMERLMIG+L K + F + G +N + +
Sbjct: 414 EVEEYLAKVVQLFSYLTDKDLFAEIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTSKMEGMMNDLAI 486
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: A0A835YLK2_9STRA (Cullin n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YLK2_9STRA) HSP 1 Score: 95.9 bits (237), Expect = 3.560e-21 Identity = 50/73 (68.49%), Postives = 58/73 (79.45%), Query Frame = 1
Query: 7 QVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
+VEEYL KVVQLFSYLTDKDLFAE+YR QLAKRLLNQRSASDD ERLMIG+L K + F + G +N + +
Sbjct: 416 EVEEYLGKVVQLFSYLTDKDLFAEMYRQQLAKRLLNQRSASDDAERLMIGKLKLKCGSQFTSKMEGMMNDLAI 488
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: D7FJN2_ECTSI (CULLIN_2 domain-containing protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FJN2_ECTSI) HSP 1 Score: 94.4 bits (233), Expect = 9.870e-21 Identity = 50/72 (69.44%), Postives = 57/72 (79.17%), Query Frame = 1
Query: 10 VEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
VEEYLAKVVQLFSYL DKDLFA+IYRNQLA+RLLN RSASDDMERLMIG+L K + F G +N + +
Sbjct: 148 VEEYLAKVVQLFSYLADKDLFAKIYRNQLARRLLNSRSASDDMERLMIGKLKLKCGSQFTFKMEGMMNDLAI 219
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: F0XVV7_AURAN (CULLIN_2 domain-containing protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0XVV7_AURAN) HSP 1 Score: 93.6 bits (231), Expect = 2.300e-20 Identity = 49/74 (66.22%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
+ VE YL K VQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDD ERLMIG+L + + F G +N + +
Sbjct: 411 EDVESYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAI 484
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: A0A7S3JSF7_9STRA (Hypothetical protein n=1 Tax=Aureoumbra lagunensis TaxID=44058 RepID=A0A7S3JSF7_9STRA) HSP 1 Score: 92.4 bits (228), Expect = 5.860e-20 Identity = 47/74 (63.51%), Postives = 57/74 (77.03%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
+++E YL K VQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDD E+LMIG+L + + F G +N + +
Sbjct: 411 EEIEAYLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAEKLMIGKLKLRCGSQFTGKMEGMLNDLAI 484
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: A0A8J2SP16_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2SP16_9STRA) HSP 1 Score: 91.7 bits (226), Expect = 1.090e-19 Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
+ VE +L K VQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDD ERLMIG+L + + F G +N + +
Sbjct: 415 EDVEAFLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKLKLRCGSQFTGKMEGMLNDLAI 488
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: M4BNM2_HYAAE (CULLIN_2 domain-containing protein n=26 Tax=Peronosporaceae TaxID=4777 RepID=M4BNM2_HYAAE) HSP 1 Score: 90.1 bits (222), Expect = 3.790e-19 Identity = 48/74 (64.86%), Postives = 56/74 (75.68%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
+QVE+YL KVV +FSYLTDKDLFAEIYRNQLAKRLLNQRSASDD E LMIG+L + F G +N + +
Sbjct: 407 EQVEDYLEKVVFVFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAEVLMIGKLKLRCGAQFTGKMEGMMNDLAI 480
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: A0A7S3ZYF8_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A7S3ZYF8_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 4.510e-19 Identity = 45/53 (84.91%), Postives = 48/53 (90.57%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGEL 162
+ VE +L K VQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDD ERLMIG+L
Sbjct: 415 EDVEAFLEKTVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDAERLMIGKL 467
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: A0A7S2WAA5_9STRA (Hypothetical protein n=2 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2WAA5_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.320e-18 Identity = 46/74 (62.16%), Postives = 55/74 (74.32%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITL 225
++VE +L K VQLFSYL DKDLFAEIYRNQLAKRLLNQRSASDD ERLMI +L + + F G +N + +
Sbjct: 410 EEVETFLEKTVQLFSYLVDKDLFAEIYRNQLAKRLLNQRSASDDHERLMISKLKQRCGSQFTGKMEGMLNDLAI 483
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Match: F0WS96_9STRA (Putative cullin putative n=1 Tax=Albugo laibachii Nc14 TaxID=890382 RepID=F0WS96_9STRA) HSP 1 Score: 88.6 bits (218), Expect = 1.320e-18 Identity = 47/76 (61.84%), Postives = 56/76 (73.68%), Query Frame = 1
Query: 4 KQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMIGELTGKVLTIFCNSDIGRVNAITLDT 231
+QVE YL KVV +FSY+ DKDLFAEIYRNQLAKRLLNQRSAS D E LMIG+L + F + G +N +T+ T
Sbjct: 414 EQVETYLEKVVSVFSYMIDKDLFAEIYRNQLAKRLLNQRSASTDAELLMIGKLKLRCGAQFTSKMEGMMNDLTIGT 489 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31550.8515.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31550.8515.1 >prot_H-paniculata_contig31550.8515.1 ID=prot_H-paniculata_contig31550.8515.1|Name=mRNA_H-paniculata_contig31550.8515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=87bp MKQVEEYLAKVVQLFSYLTDKDLFAEIYRNQLAKRLLNQRSASDDMERLMback to top mRNA from alignment at H-paniculata_contig31550:1808..2068+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31550.8515.1 ID=mRNA_H-paniculata_contig31550.8515.1|Name=mRNA_H-paniculata_contig31550.8515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=261bp|location=Sequence derived from alignment at H-paniculata_contig31550:1808..2068+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31550:1808..2068+ >mRNA_H-paniculata_contig31550.8515.1 ID=mRNA_H-paniculata_contig31550.8515.1|Name=mRNA_H-paniculata_contig31550.8515.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=522bp|location=Sequence derived from alignment at H-paniculata_contig31550:1808..2068+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |