mRNA_H-paniculata_contig31420.8488.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: D8LM52_ECTSI (Uric acid-xanthine permease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LM52_ECTSI) HSP 1 Score: 142 bits (358), Expect = 3.300e-40 Identity = 77/129 (59.69%), Postives = 84/129 (65.12%), Query Frame = 1
Query: 4 KGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARESLLAEFGLIYTPMCPYISFVGLGISSGNGEVALPFGSAVYVGLGFSVSCMLM 390
K +GAV+GTFLVCSWVE LAFI P AL+K+FPPIVTGVTVFLIGAAL+GTGFKYW G AFCADN Y + G GNGEV LPFGSAVYVGLGFSV ML+
Sbjct: 98 KAYGAVLGTFLVCSWVEIFLAFIKPNALRKVFPPIVTGVTVFLIGAALVGTGFKYWGGGAFCADN---------------------------YAIDILCG---GNGEVVLPFGSAVYVGLGFSVFAMLV 196
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A383VE55_TETOB (Uncharacterized protein n=1 Tax=Tetradesmus obliquus TaxID=3088 RepID=A0A383VE55_TETOB) HSP 1 Score: 108 bits (269), Expect = 7.810e-25 Identity = 58/130 (44.62%), Postives = 77/130 (59.23%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARESLLAEFGLIYTPMCPYISFVGLGISSGNGEVALPFGSAVYVGLGFSVSCMLM 390
E G ++GT VC+ +L+F+ RALKK+FPPIVTG T+FLIGA LI TGFKYW G FC +N L P+P + G T C + + + + NG+V LPFGS Y+GLGF M++
Sbjct: 127 EVALGKMLGTSAVCAVWPMILSFMPARALKKVFPPIVTGTTIFLIGAKLIATGFKYWGGGVFCGENYLHL-PKPSPNCVITMLDGSTMTGPC--YNAMTAPLCADNGDVKLPFGSGPYIGLGFFTFSMIV 253
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A830HQ69_9CHLO (Uncharacterized protein n=1 Tax=Pycnococcus provasolii TaxID=41880 RepID=A0A830HQ69_9CHLO) HSP 1 Score: 103 bits (256), Expect = 4.390e-23 Identity = 60/128 (46.88%), Postives = 74/128 (57.81%), Query Frame = 1
Query: 10 HGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARESLLAE-FGLIYTPMCPYISFVGLGISSGNGEVALPFGSAVYVGLGFSVSCMLM 390
+G ++GT +VCS++E L+FI P LKK FPPIV+GVTV LIGAAL GTG KYW G A CAD L+ + + +P C GEV L FGS +VGLGFSV CML+
Sbjct: 148 YGRMLGTIMVCSFLEIFLSFIPPAQLKKAFPPIVSGVTVMLIGAALTGTGMKYWGGGAVCADMAWK------THGQLIGKGVSPVPSPGCT------------AGEVTLNFGSPQWVGLGFSVLCMLL 257
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A2P6V3N6_9CHLO (Uric acid-xanthine permease isoform A n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6V3N6_9CHLO) HSP 1 Score: 102 bits (254), Expect = 9.620e-23 Identity = 55/127 (43.31%), Postives = 75/127 (59.06%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVL-TFAPRPPARESLLAEFGLIYTPMCPYISFVGLGIS-SGNGEVALPFGSAVYVGLGFSV 375
E G ++GT VC V +++F+ PR +K++FPPIV GVT+ LIG L G G K W G AFCADN + + P + + + C F + + +GNG+V LPFGSAVYVGLGF+V
Sbjct: 152 EDAFGKILGTAAVCGIVPFLISFLPPRVIKRVFPPIVCGVTICLIGINLCGVGMKAWGGGAFCADNYMGLYLPATGCSYFDVKTNATLASESC----FRNVPVECNGNGDVMLPFGSAVYVGLGFAV 274
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: D8TJ43_VOLCA (Methyltranfer_dom domain-containing protein n=1 Tax=Volvox carteri f. nagariensis TaxID=3068 RepID=D8TJ43_VOLCA) HSP 1 Score: 102 bits (254), Expect = 9.840e-23 Identity = 59/131 (45.04%), Postives = 76/131 (58.02%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPAR---ESLLAEFGLIYTPMCPYISFVGLGISSGN---GEVALPFGSAVYVGLGFSV 375
E+ +G ++GT ++CS + +L+F R +KKIFPPIV GV + LIG LI GFK W G AFCADN L P P S LA IY + Y++ G+ G+ EV LPFGS Y+GLGF V
Sbjct: 664 EEAYGKLLGTLMLCSIIPTILSFFPIRIIKKIFPPIVCGVVIMLIGVHLIAAGFKNWGGGAFCADNYL-HGPTPTTFLNVPSKLANGTTIYKNVTAYVA---PGVKCGDLTKTEVQLPFGSQQYIGLGFIV 790
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A835SW08_CHLIN (Uncharacterized protein n=3 Tax=Chlamydomonas TaxID=3052 RepID=A0A835SW08_CHLIN) HSP 1 Score: 101 bits (252), Expect = 1.700e-22 Identity = 57/130 (43.85%), Postives = 78/130 (60.00%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARES--LLAEFGLIYTPMCPYISFVGLGISSGNG---EVALPFGSAVYVGLGFSV 375
E+ +G +GT +C+ + +L+F R ++KIFPPIV G+T+ +IG LIG GFK W G AFCADN PPA ++ L A++ + M +VG GI G+ EV LPFGS Y+GLGF V
Sbjct: 174 EEAYGMFLGTIAMCAVIPAILSFFPIRVIRKIFPPIVCGITIMMIGVHLIGAGFKNWGGGAFCADNW----QHPPATKACFLPAKYANGTSYMQASQCWVGPGIKCGDATKTEVFLPFGSQQYIGLGFLV 299
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A2P6VGE6_9CHLO (Uric acid-xanthine permease n=1 Tax=Micractinium conductrix TaxID=554055 RepID=A0A2P6VGE6_9CHLO) HSP 1 Score: 101 bits (251), Expect = 2.210e-22 Identity = 56/127 (44.09%), Postives = 74/127 (58.27%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVL-TFAPRPPARESLLAEFGLIYTPMCPYISFVGLGIS-SGNGEVALPFGSAVYVGLGFSV 375
E+ G V+GT VC+ V ++F+ PR +K++FPPIV GVT+ LIG L G G K W G AFCADN + P + + + C F + I +GNG+V LPFGS VYVGLGF+V
Sbjct: 152 EEAFGKVLGTAAVCAVVPFFISFLPPRVIKRVFPPIVCGVTICLIGINLCGVGMKSWGGGAFCADNYKGLYLPATGCSYVDMKTNATVTSESC----FRNVPIKCNGNGDVVLPFGSPVYVGLGFAV 274
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A835WK57_9CHLO (Uncharacterized protein n=1 Tax=Chlamydomonas schloesseri TaxID=2026947 RepID=A0A835WK57_9CHLO) HSP 1 Score: 100 bits (250), Expect = 3.390e-22 Identity = 59/132 (44.70%), Postives = 78/132 (59.09%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARES--LLAEF--GLIYTPMCPYISFVGLGISSGNG---EVALPFGSAVYVGLGFSV 375
E+ +G +GT VC + +L+F R +KKIFPPIV G+T+ +IG LIG GFK W G AFCADN PPA ++ L A++ G Y + +VG G+ G+ EV LPFGS Y+GLGF V
Sbjct: 172 EEAYGMFLGTIAVCGIIPVILSFFPIRVIKKIFPPIVCGITIMMIGVHLIGAGFKNWGGGAFCADNW----QHPPAAKTCYLPAKYPNGTSYMQQSN-LCWVGPGVKCGDPTKTEVFLPFGSQQYIGLGFLV 298
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A0A0D6R1P1_ARACU (Uncharacterized protein n=2 Tax=Araucaria cunninghamii TaxID=56994 RepID=A0A0D6R1P1_ARACU) HSP 1 Score: 100 bits (249), Expect = 4.280e-22 Identity = 49/125 (39.20%), Postives = 68/125 (54.40%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARESLLAEFGLIYTPMCPYISFVGLGISSGNGEVALPFGSAVYVGLGFSV 375
E +G ++GT +VC W++ +F PR L++IFPP VTG+++ LIG +LI TGF+YW G ++CA VLT + +GNG+V LPFG YVGLGF V
Sbjct: 181 EDAYGHILGTIVVCCWLQVAASFCPPRILRRIFPPTVTGISIILIGVSLITTGFEYWGGGSYCASQVLT-----------------------------SKALCTGNGDVELPFGHRYYVGLGFVV 276
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Match: A8II65_CHLRE (Uric acid-xanthine permease n=2 Tax=Chlamydomonas TaxID=3052 RepID=A8II65_CHLRE) HSP 1 Score: 100 bits (249), Expect = 4.330e-22 Identity = 59/132 (44.70%), Postives = 79/132 (59.85%), Query Frame = 1
Query: 1 EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIGTGFKYWRGSAFCADNVLTFAPRPPARES--LLAEF--GLIYTPMCPYISFVGLGISSGNG---EVALPFGSAVYVGLGFSV 375
E+ +G +GT ++C+ + +L+F R +KKIFPPIV G+T+ +IG LIG GFK W G AFCADN PPA + L A++ G Y + +VG GI G+ EV LPFGS Y+GLGF V
Sbjct: 190 EEAYGMFLGTIVMCAIIPVILSFFPIRIIKKIFPPIVCGITIMMIGVHLIGAGFKNWGGGAFCADNW----QHPPAPTTCFLPAKYPNGTSYLQQST-VCWVGPGIKCGDATKTEVFLPFGSQEYLGLGFLV 316 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31420.8488.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31420.8488.1 >prot_H-paniculata_contig31420.8488.1 ID=prot_H-paniculata_contig31420.8488.1|Name=mRNA_H-paniculata_contig31420.8488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=130bp EKGHGAVVGTFLVCSWVEDVLAFINPRALKKIFPPIVTGVTVFLIGAALIback to top mRNA from alignment at H-paniculata_contig31420:347..1748- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31420.8488.1 ID=mRNA_H-paniculata_contig31420.8488.1|Name=mRNA_H-paniculata_contig31420.8488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1402bp|location=Sequence derived from alignment at H-paniculata_contig31420:347..1748- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31420:347..1748- >mRNA_H-paniculata_contig31420.8488.1 ID=mRNA_H-paniculata_contig31420.8488.1|Name=mRNA_H-paniculata_contig31420.8488.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=780bp|location=Sequence derived from alignment at H-paniculata_contig31420:347..1748- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |