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Homology
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: D7FXG5_ECTSI (Arginine/serine-rich splicing factor 6 n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FXG5_ECTSI) HSP 1 Score: 291 bits (745), Expect = 2.760e-87 Identity = 140/155 (90.32%), Postives = 147/155 (94.84%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASRRTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSRDSR 466
HTRDRDLDRAF RYGRIEKIDVRMGFAFIEF+D+RDAEDAVAEMDGREFDGARIVVQ GRGHRPNGPKFA+RRTEHR+ VEGLDS TSWQDLKDFGRQAGQVLYSDVF R GRRWGVVEY+SRDDMKAA+RTLDDTRLGGKYIRV+EEN RDSR
Sbjct: 13 HTRDRDLDRAFGRYGRIEKIDVRMGFAFIEFEDRRDAEDAVAEMDGREFDGARIVVQPGRGHRPNGPKFATRRTEHRITVEGLDSHTSWQDLKDFGRQAGQVLYSDVFFRQGRRWGVVEYVSRDDMKAAIRTLDDTRLGGKYIRVREENSGRDSR 167
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: A0A7S0Q5F1_9EUKA (Hypothetical protein (Fragment) n=1 Tax=Coccolithus braarudii TaxID=221442 RepID=A0A7S0Q5F1_9EUKA) HSP 1 Score: 144 bits (362), Expect = 3.630e-36 Identity = 64/131 (48.85%), Postives = 99/131 (75.57%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASRRTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVR 394
+TR+RDL+R F RYGR+E++D++ GFAF+EF D RDA+DAV +M GR+ DG RI V+ +G R G + ++ + R+ VEGLD RTSWQDLKDFGR+ G ++Y+DV++ +++G++EY ++D + A++
Sbjct: 15 YTRERDLERVFDRYGRVERVDLKRGFAFVEFSDDRDADDAVYDMHGRDLDGRRITVEHAKGGR--GARGPAKGSGFRIKVEGLDMRTSWQDLKDFGRKVGDIMYTDVWVDGSKKFGIMEYGRKEDYEEALK 143
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: A0A6P8RXC7_GEOSA (serine/arginine-rich splicing factor 5-like isoform X1 n=4 Tax=Gymnophiona TaxID=8445 RepID=A0A6P8RXC7_GEOSA) HSP 1 Score: 145 bits (367), Expect = 2.360e-35 Identity = 79/177 (44.63%), Postives = 111/177 (62.71%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQ-----RGRGHRPNGPKFASR-----------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSRDSR 466
H R+RD+++ F YGRI++I+++ GF F+EF+D RDA+DAV E++G+E R+ ++ RGRG G +F +R RT+HR++VE L SR SWQDLKDF R+AG+V Y D R + GVVE+ S DDMK A+ TLD T L G+ I++ E+N R SR
Sbjct: 14 HARERDVEKFFKGYGRIKEINLKNGFGFVEFEDHRDADDAVYELNGKELCNERVTIEHARNRRGRGRFGGGGRFPTRFSYQYRSSGSSRYGPPLRTKHRIIVENLSSRVSWQDLKDFMRKAGEVTYVDAH-RSNKNEGVVEFASFDDMKNALDTLDGTELNGRKIKLIEDNKKRRSR 189
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: A0A7N9ASU1_9TELE (Serine/arginine-rich splicing factor 6-like n=2 Tax=Percomorphaceae TaxID=1489872 RepID=A0A7N9ASU1_9TELE) HSP 1 Score: 145 bits (366), Expect = 2.960e-35 Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR-------------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSR 457
H R++D+ R FS YG++ +ID++ G+ F+EF+D RDA+DAV E++G+E G R++++ RG R +G + R RTEHR++VE L SR SWQDLKDF RQAG+V Y+D GV+E+ SR DMK A+ LD T + G+ IR+ E+ P R
Sbjct: 12 HVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVIIEHARGPRRDGYGYGGRSGGYSSWNRSGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSRSDMKRALEKLDGTDINGRKIRLVEDKPRR 181
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: A0A3Q4H868_NEOBR (Serine/arginine-rich splicing factor 6-like n=28 Tax=Ovalentaria TaxID=1489908 RepID=A0A3Q4H868_NEOBR) HSP 1 Score: 145 bits (367), Expect = 9.550e-35 Identity = 75/171 (43.86%), Postives = 106/171 (61.99%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR-------------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSR 457
H R++D+ R FS YG++ +ID++ G+ F+EF+D RDA+DAV E++G+E G R+V++ RG R +G + R RTEHR++VE L SR SWQDLKDF RQAG+V Y+D GV+E+ SR DMK A+ LD T + G+ IR+ E+ P R
Sbjct: 12 HVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGYGYGGRSGGYSSWNRTGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSRSDMKRALEKLDGTDINGRKIRLVEDKPRR 181
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: UPI00159C61E2 (serine/arginine-rich splicing factor 6 isoform X1 n=4 Tax=Carangaria TaxID=1489904 RepID=UPI00159C61E2) HSP 1 Score: 146 bits (369), Expect = 1.220e-34 Identity = 75/174 (43.10%), Postives = 106/174 (60.92%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR----------------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSR 457
H R++D+ R FS YG++ +ID++ G+ F+EF+D RDA+DAV E++G+E G R+V++ RG R +G F R RTEHR++VE L SR SWQDLKDF RQAG+V Y+D G++EY SR +MK A+ LD T + G+ IR+ E+ P R
Sbjct: 12 HVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGSGFGGRSKFSGGHSSWNRTGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKGRANE-GIIEYRSRSEMKRAIEKLDGTDVNGRKIRLVEDKPRR 184
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: A0A3Q1AJP8_AMPOC (Serine/arginine-rich splicing factor 6-like n=3 Tax=Pomacentridae TaxID=30863 RepID=A0A3Q1AJP8_AMPOC) HSP 1 Score: 144 bits (363), Expect = 3.480e-34 Identity = 74/169 (43.79%), Postives = 105/169 (62.13%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR-------------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENP 451
H R++D+ R FS YG++ +ID++ G+ F+EF+D RDA+DAV E++G+E G R+V++ RG R +G + R RTEHR++VE L SR SWQDLKDF RQAG+V Y+D GV+E+ SR DMK A+ LD T + G+ IR+ E+ P
Sbjct: 12 HVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGYGYGGRSNSYSSWNRSGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSRSDMKRALEKLDGTDINGRKIRLVEDKP 179
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: UPI000C6FAFB9 (serine/arginine-rich splicing factor 6-like isoform X1 n=10 Tax=Percomorphaceae TaxID=1489872 RepID=UPI000C6FAFB9) HSP 1 Score: 145 bits (365), Expect = 3.840e-34 Identity = 74/171 (43.27%), Postives = 106/171 (61.99%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR-------------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSR 457
H R++D+ R FS YG++ +ID++ G+ F+EF+D RDA+DAV E++G+E G R++++ RG R +G + R RTEHR++VE L SR SWQDLKDF RQAG+V Y+D GV+E+ SR DMK A+ LD T + G+ IR+ E+ P R
Sbjct: 12 HVREKDIQRFFSGYGKLLEIDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVIIEHARGPRRDGYGYGGRSSGYSSWNRSGRDKYGPPVRTEHRLIVENLSSRCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSRSDMKRALEKLDGTDVNGRKIRLVEDKPRR 181
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: UPI00117D83BB (serine/arginine-rich splicing factor 6-like isoform X1 n=2 Tax=Sphaeramia orbicularis TaxID=375764 RepID=UPI00117D83BB) HSP 1 Score: 144 bits (364), Expect = 4.970e-34 Identity = 73/171 (42.69%), Postives = 107/171 (62.57%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR-------------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSR 457
H R++D+ R FS YG++ ++D++ G+ F+EF+D RDA+DAV E++G+E G R+V++ RG R NG ++ R RTEHR++VE L +R SWQDLKDF RQAG+V Y+D GV+E+ S+ D+K AV LD T + G+ IR+ E+ P R
Sbjct: 12 HVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRNGYGYSGRSSSYNSWNRSGREKYGPPVRTEHRLIVENLSTRCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSKADLKRAVEKLDGTDINGRKIRLVEDKPRR 181
BLAST of mRNA_H-paniculata_contig314.8483.1 vs. uniprot
Match: A0A6P7IBI1_9TELE (serine/arginine-rich splicing factor 6-like isoform X1 n=3 Tax=Parambassis ranga TaxID=210632 RepID=A0A6P7IBI1_9TELE) HSP 1 Score: 143 bits (360), Expect = 1.300e-33 Identity = 72/168 (42.86%), Postives = 106/168 (63.10%), Query Frame = 2
Query: 2 HTRDRDLDRAFSRYGRIEKIDVRMGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASR----------------RTEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSRDDMKAAVRTLDDTRLGGKYIRVKEENPSR 457
H R++D+ R FS YG++ ++D++ G+ F+EF+D RDA+DAV E++G+E G R+V++ RG R +G +A R RTEHR++VE L S+ SWQDLKDF RQAG+V Y+D GV+E+ SR D+K A+ LD T + G+ IR+ E+ R
Sbjct: 12 HVREKDIQRFFSGYGKLLEVDLKNGYGFVEFEDMRDADDAVYELNGKELCGERVVIEHARGPRRDGYGYAGRSSSWNRPGRDKYGPPVRTEHRLIVENLSSKCSWQDLKDFMRQAGEVTYADAHKGRANE-GVIEFRSRSDLKRAIEKLDGTDINGRKIRLVEDKHRR 178
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 247.3 |
| Seed ortholog evalue | 6.3e-63 |
| Seed eggNOG ortholog | 2880.D7FXG5 |
| Preferred name | NPL3 |
| KEGG ko | ko:K12893,ko:K12896,ko:K14651 |
| KEGG Pathway | ko03022,ko03040,ko05168,ko05202,map03022,map03040,map05168,map05202 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0000375,GO:0000377,GO:0000398,GO:0000993,GO:0001067,GO:0001069,GO:0001098,GO:0001099,GO:0003674,GO:0003676,GO:0003723,GO:0003727,GO:0003729,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005737,GO:0006139,GO:0006355,GO:0006357,GO:0006396,GO:0006397,GO:0006403,GO:0006405,GO:0006406,GO:0006412,GO:0006415,GO:0006417,GO:0006518,GO:0006611,GO:0006725,GO:0006807,GO:0006810,GO:0006886,GO:0006913,GO:0008104,GO:0008143,GO:0008150,GO:0008152,GO:0008380,GO:0009058,GO:0009059,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009987,GO:0010467,GO:0010468,GO:0010494,GO:0010556,GO:0010557,GO:0010558,GO:0010604,GO:0010605,GO:0010608,GO:0010628,GO:0010629,GO:0015031,GO:0015833,GO:0015931,GO:0016043,GO:0016070,GO:0016071,GO:0017148,GO:0019219,GO:0019222,GO:0019538,GO:0019899,GO:0022411,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031369,GO:0031370,GO:0031503,GO:0031554,GO:0032268,GO:0032269,GO:0032784,GO:0032786,GO:0032968,GO:0032984,GO:0032991,GO:0033036,GO:0034243,GO:0034248,GO:0034249,GO:0034613,GO:0034641,GO:0034645,GO:0035770,GO:0036464,GO:0042886,GO:0043043,GO:0043170,GO:0043175,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043242,GO:0043244,GO:0043603,GO:0043604,GO:0043624,GO:0043933,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044271,GO:0044424,GO:0044444,GO:0044464,GO:0044877,GO:0045184,GO:0045292,GO:0045892,GO:0045893,GO:0045934,GO:0045935,GO:0045944,GO:0046483,GO:0046907,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0050657,GO:0050658,GO:0050789,GO:0050794,GO:0051028,GO:0051128,GO:0051129,GO:0051168,GO:0051169,GO:0051171,GO:0051172,GO:0051173,GO:0051179,GO:0051234,GO:0051236,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051641,GO:0051649,GO:0060255,GO:0060567,GO:0065007,GO:0070063,GO:0070717,GO:0070727,GO:0071166,GO:0071426,GO:0071427,GO:0071702,GO:0071704,GO:0071705,GO:0071840,GO:0080090,GO:0090304,GO:0097159,GO:1901360,GO:1901363,GO:1901564,GO:1901566,GO:1901576,GO:1902679,GO:1902680,GO:1903506,GO:1903507,GO:1903508,GO:1904594,GO:1990904,GO:2000112,GO:2000113,GO:2000804,GO:2000805,GO:2001141 |
| EggNOG free text desc. | RNA splicing |
| EggNOG OGs | COG0724@1,KOG0106@2759 |
| Ec32 ortholog description | SR RNA splicing protein |
| Ec32 ortholog | Ec-07_003150.1 |
| COG Functional cat. | J |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko03019,ko03021,ko03041 |
| Exons | 8 |
| Model size | 3462 |
| Cds size | 615 |
| Stop | 1 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig314.8483.1 >prot_H-paniculata_contig314.8483.1 ID=prot_H-paniculata_contig314.8483.1|Name=mRNA_H-paniculata_contig314.8483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=205bp
MGFAFIEFDDQRDAEDAVAEMDGREFDGARIVVQRGRGHRPNGPKFASRR
TEHRVVVEGLDSRTSWQDLKDFGRQAGQVLYSDVFIRHGRRWGVVEYLSR
DDMKAAVRTLDDTRLGGKYIRVKEENPSRDSRSRSRSHSRRSRSDSRSPP
ARRRRSRDRRSPSPDARDDKDRGRDRGRRRERDYSRSRSRSPARHSRSRS
RHSR* back to topmRNA from alignment at H-paniculata_contig314:4504..15405+ Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig314.8483.1 ID=mRNA_H-paniculata_contig314.8483.1|Name=mRNA_H-paniculata_contig314.8483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=10902bp|location=Sequence derived from alignment at H-paniculata_contig314:4504..15405+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
GCACACACGAGACAGAGATCTGGACCGCGCCTTCAGCAGATATGGCAGGA
TCGAGGTCAGTCGAGCCCGCGGTTGGTTCGCTCCGATTCAAACGGTCTTG
TATAAGAAGGATAGAAAAAATAATATACATAATCGATGACGATCTTTGGT
TTGACGTCACTGACAAAGATATCATAATCGTCACTTCTACGTGCTATGTA
ACCACCTTGGCGAGGATAAACTGCCCGTAAATGCGACGTCCGCCATTTAT
CCGTCTATACCTTGTGTAATTGTTAATCAATAGAAAGCATGATGCGGTGA
CCCTGCTTTCACGGCGGTGATTCGGTTGAGTTTTGGCTGCCTTGAAGCTA
CAACAGTTAGCGAGACGAGCACTTGTAAAAATGTGGTAAGCCGAACTCTG
CAGGGGTATATTCGAAATGGGATGTCGGTGTTCATGCGGCGCTAAACAAC
ACGTGATCCAAAGTAGAGGCTGAATCCTGGAAGTAAACCTCCGCCAGAGC
GTATGCTGGTGTTCGTTGCCTGTGAACATAGAAAGTTGTGTATGATTGGG
CAAGATGGGGCACTTGATTGGTCGCGCGGAGTGTGGGAGCTACAGACCCA
CCACTGAGACGTACATGAAGTATCTCGTGATGAAGTCGTTCGATTAATGA
GAGACATGAAGTTCAGTGTTCGTTGGCATGGCGGGAACGATTAAATGCTT
GCACGCTCGTCTCAAAGCGTACACCGTGCCTAGTGAGAAGGAGCCAGGCG
CTTAAATGTCACGCGTTTCGTGTTTTAGGTGTAAGGGGATATCTTCGATT
GGCAATTTATAGTAGATGATGAAGCAATGAATTGTCTGTGCATGTCCTGC
CAATTTGGAGCATGACATTTAAGCTTATGGACACCATAATTAAGTTCAAG
TTCCAGCTCTTGGGACACATTTTCGCCGATAACCCACGGCTCTTCAAAGC
TTGGAATATAAGTGGAGTAATTCACCGTTTCAATTTTGGTTCCGCCCTTG
TAAGAGCTAGCCTCACCGCCCTCCCAAACTGATGTGCGACTTGCAGAGTA
ATTGAGTAACGAACACCCTGAGAGAGAATTGCGCTTATACATGTCGAGTC
CGCTTCTGTTGTGGTGCTTGACAGATGAGATGGTAGCAGTCTCATATTGC
TATCTTTTTATTATACGCGTACCGTGTGATCCCCGTGGTACGAGCGGTGT
TGCTCGACTTCACACCAGGATGGGTCATTATGCAAAGGGTGTTTTGTTAA
CCATGCTGACCGAAGTTGCTGACTAGACGATTCCAGTCGTGGACAACGAT
CAAGTGAATTTGCCTAAATTCTTGTTTGTTTCCCTTCGATTTTTTTTTTT
TTTGTCAGAAAATCGACGTGAGAATGGGATTCGCTTTCATCGAATTTGAC
GACCAGCGTGATGCCGAGGATGCTGTTGCTGGTGAGGGTATAATCGTCAT
GTCCCCGAAGTGTAAACGTGATTCAAATGTCAAAAAGTCTACCTGAATTT
GTTGATTTCGGAATCCCTCGGGGGAAATGATTTTGCGTAGAATCGGGGCG
TCGCGGGTCATACGAGCTCGGCCCACCAAGACGGAACAAAAACAGTGGAC
GAGCCATTTTCATTGGAATGTCAGGAATTTTTACTATAAATTTGAGGTGA
TGAGCGCGTCAGGAACACCGAGGCTATCACTCCTGATGTGTTTTTTTCTT
TTTTTCCTCGAAAGATATGGATTCTTCTTTAGAGTGAAAGCCTCGGTATT
CATGATGCGCTTGTCTCCTCAACATTTCAAGTCTAAAGTCCTTGGATTCG
AATGAAAATGACGTGTTGAGTCAATATCGGGTAATTCGGTCTAGACATGG
TGTAATAACTGAAAAATCAGTGAAAAGGCCACAAGAAGAGAATGAAGAAA
AAAAAAAAAGTCGAGCGCTGATGCCCTTGTATGCATAATGAGATAATTAA
AAAAATTCAGTTAAAAAAAATATAAAATTAGAATGAGAATGACCCCTTGA
AGATGACGACGACACCGGCGTCCACGTTCTATACATTTTTGTATTTCTTC
TCGCTGTATTATCAGCGATACACACATAATTGTTGTACGATCGGGCACGA
ACTCATTTATATTGAATTTCGTACTGATGTGCCATGTAGTAGCCGCTAAC
CAGCAGTACAGTCGCTGTAGTATTAAAAATTGAAAGGATAAAAGTATGCA
AATGGTCGATCTGAGTGTGCGTTGCACTCCGGAATGTTTATAGGGGGTTA
GGGAAACCACATAATTTGGTGTAAAACACATGGGTTCGTTCTATGTAGTC
TGTCGGCTATTTTTCACCTCTCTCTGGGCTCAGCCTATACCATTCATGCC
AAAAAAATATCGTTCCGAAACGTTTTGTATATCGTTTGTACGTTGGATGT
CCACCGGGTCAATCATTCCTATCCACAAATTTGACAAAAATCTTTGTAAG
TCTGTTGGCGAGACAGCTGTTTGTAGTTGGTGGGCACCAGCACTTCGTTA
CCATGTAGGTTGTCTTATACTTTGGATAGCGCAGCTTAATCTTCGACTTG
CTATTCACATTTCATACTGTTTCACCTCCCAGAAAAAACTGAAACAATTC
CCTTGAGTTTTAGAATGAGCTCGTGTACTATATGTGCCCCGGACCATCCA
CGTTTGCTCATAATATTCGTAAGTTGAATGGACAGGGGTGGGTACTTGGT
GTTATGTGTCCGGTCATTCTAAAACTCAAACGAATATTTTCAGTTTTTTG
TTATAACAATTTGCAAGTGTTTGTATTCGTCCGGAGGGTCGATTTTTTAT
ATGAATCTTGTCGTGTCGATTGACACGTACCCACGGCAACATGCGCACGT
TACTGTACAGTGTATCTAAGTGTGGTCGAGACAGTCCTAGCTCATTGGTC
GGGGATGATGGAGTGAACGTGTTTGCCGCATCACGTATGAGACTTGGCAC
ATTTTCGTACGGGAGGATTTATGCCTGATTTGTTCGCAGGTTGCTTCATT
TGAGTGTTGAGCATTCCATTCGTGGTGCTGCGGTACGCCAGGCGAAGGAT
TTGCGCGAAACGATGCTCAATAGACTTCGACTCGGCAGTCGCGGGTAATT
GCCTCTAGCCCTGTCCGCACTAGCAGCATCACAAAGATTGGCGTTCGCGT
GGTGCTTCAATGCTGTGTGTGGGCGAAGTGCACATGAGCCAACGTGGGAA
TCCGTTGTCCTCCTATGATATTACACGACGTGTGTGCACGTTGTGCGCGA
ATTGAACTTAAGGAGGAGATGCTTGCAATGAACACGTTTGTTTGTCTCTC
CGCCTGATATGATTTGCTGAAGTCAGTATGTTAGATGCGGCGATGAAGAT
TAGATACGCACAGACAACGGACGGCTTGCTTAAATAATCTGTAAAACTGG
GGTTGCGATGCGACCAATTTCTCCCCGTGCAACAGATACACTGGATACCA
ATAGACAGCTGATCATAAGATCAATGTATCCCCCACGCAAGTTTTAGGTG
TCTACGTTCTCTCGGGTTCTTTAATTCCGCAGTTGAATAGCGAATTAATT
TAATTATTTACTTTGTTTCAGAGTGTAATTTTCTGAAACAGGAGTTGAGA
CACGACCAATTTCTCCTCACCCACGGAGCACATGCAACAGATATACGAAC
ATCCATAGATAGTTGACGATGAGACCTATTCATCTCATGCAACTTTCAGG
CCTCCACATTCTCCGGGAAATTAATACCCGCGGTTGAAGAGCGAGGTGTT
GATGGGCTAAAGTGAAGTTTCACGCTCAAAGCATCCGTGTTTTCGCGTCA
GCTTTGTTCGGCATTGGTGACGCGGTTCTGGAAGACCACGTAGTCAAAGT
GTTGCGTCACCAGTCCAGTTCGTTACCAATCCGCGTGCGGGGAAACTAGT
GAGTGCTAAACTGGCACGCCCTGGAATATGACCACTTGTCGAGTGCCGCC
CCCTCTGAAAAACAATGGTGTTTTTCGCATGGTCCAGCACTAGCAGTTGT
CCCTAACAGCCACGTATTCATCGACTTGTGTATAAACGGCTTTTTCAACA
CACTTTGAACGCTGTATCTAGCTGTCAGAACTTCGAGAATGGTTATTGGT
GCTCACAACCTTCTGTGCGTGGTGAATGAATTGTCGGCTCCGGGCTGTAG
CTCTTGAGCTGTATCGCAAATAGCTGCCAAGTGATACAGAGGAATTCCAT
TGGCTCGCCCTTGTTACCCTCTCCAAGGCTAACATTTTAACAAGTCTGGC
GTCGCTTTTGTCTGTAGGACAGCCCCTTGTCAGTCAGAATTTACGCAATG
TATATACCTCGTACTCGTCAAGTGCTTATGCCTCGAAGAGCATATCGAAT
GTATCTGCTTCCGATAAAATTACGATTAATGAATGAATTGATTAATTTAA
TATTCAGTGGAAGCAGAATCCTATTGCCTCAAAATGAGGAATCAGACCAA
CCCCCGAATGAAACTGCCCGAATGGGGAAAAGCTGAATGCAATTTATAAC
CTTTAAATGTCGTTCTTTTCTCAAGCTTTTAGCATGATTTTTGGTCCTTC
GCCTCTTCTCGTCTTCTGCTAGAGATGGATGGACGAGAATTTGACGGAGC
TCGCATTGTGGTTCAACGTGGTCGCGGACACCGGCCCAACGGCCCTAAGT
TCGCTTCCCGTCGAACGGAGCATCGGGTCGTCGTGGAGGGACTAGATTCT
CGCACCAGTTGGCAGGACCTTAAGGTTGGTGTCGCAGCTATCATAACTCC
ACGTGGTTAGTAAGCCAGACGATCCAGCAGGTGGATGATGACCTATCTAA
TATATGTATATACATATATATATATATATATATATTACTGTAATGCATAG
CCAACAACCGTGTACTGCTAGATTGTCAAATATGACTGGTGGCTAGTGTT
AGATTGGTGGATGTGCATTTTGATGTTTACAAAAAATGTGTGGTAACATA
TCATTTTAATACATGAAATTATTGATGATTGACGACCCTACTGTTTGATG
TTTGTCGTGAATCATTGCCGATTTCGGCGAACAGGATTTCGGCCGCCAAG
CGGGACAGGTTCTCTACAGTGATGTCTTCATCCGTCACGGCCGTCGCTGG
GGTGAGTCATACTTTGCTTTATCAAAGGCCGGGTTGATAAATATGAAACA
GTCGGTAGGAGAGTTTTTGGCCGCAAATACCGCGTGTGACGTACTGGGTA
CTAGTTAATAATGAAGCGGAATTGATTTTGAAGAATCTCTCGTCCATTTC
ATCTTTTCAGATGGTTTACGAGTTTTTATTTGACTGAGCATGTTGCTTAG
CAATTGGCATGCCGAGAAGCATGAGGCAATGCTTTTGCATGCCTAATTTC
AAGTGTTCATACAATGTTCCCTCCTTGCTGACAATATGTTGTTGTTGTTG
CTGGTAATGATGTTGTTGTCTTCGCTGATTTTGTGGATTGCCGCTACCTG
TTGCTGGCTTGCTTCAGGCGTAGTGGAGTACTTGTCGAGGGACGACATGA
AGGCGGCCGTTCGCACCCTGGACGATACGCGCCTGGGCGGAAAGTACATA
AGGGTAAAGGAGGTAAGGAAGAAACAGATAGATGACACCGTTCAGTGTTG
TATGGCGTGCTTGATTGTCTCCTGAAATTCGGTGAAATTATATGTTGGTT
GTGAAAGCTGACTGATTCGTCTGGAATCGTTGTGTACGTCTCTAAATTTT
ACCCGCCTGAAGCTAAACATGCATAATATTGCATACGAACATCCCATCCA
CCAACCCCCCAAGTTTTATTAGCTTGTTGGCGGGGCATACGGTTGGCTAT
TGTCTATGGCGGTGTTGCCGCTGTGTCTGTATTTGTCGATGAAACGCGCC
ATGATCTCATCTGTACATGGTAATCGGCAGACAGACAGCAGGCCACGCGC
ACACACGTTGCTCGTCCGGAGTCTATTTTGGCTTGTATATGTGATTTGTC
CCCCAAAGGGCTGCTCATGAACAGAAGCTCAAACGCAGATGTTTTGAATT
GGTCGAGCGAAGGGATTGAGTTGACGCTGCATTGCTGATCGTGTCATACA
CCGTATCTCAGTGGCGTGATGGTAAATAGTTGTGTACCACTAGTGCAATC
AGTTTCGTGATGGGCCTGGGATTCAGATGAACGAGTCCCATTTCCGTTTC
TTCGCTTCCTCGTTTCCTCGCTTAGTTTTGCACTGCAATGCACTACCGCA
CACCTATACAAAAGTACAGTGCGGTTACATCTCTGTTCACGCCTATCTAA
CATATTCCCTGGTCATACAGATATAATTTGCTTCGCTTTGTTCCCTTCTC
TCCCCCCACCCCGTTTCATTTCTTTTTTTTTTACGCCCAGGAGAATCCGA
GTCGTGACAGCCGCTCCCGCAGTCGCTCTCACTCTCGCCGCTCTCGCAGT
GATTCTCGGTCCCCCCCCGCGCGGAGGCGCCGGTCTCGTGACCGCCGCTC
ACCTTCACCCGACGCCAGGGATGACAAAGACAGGGGCAGAGACAGGGGCC
GCCGCCGCGAGCGCGACTACAGCCGCAGTCGCAGCCGCTCCCCCGCCCGG
CACAGGTAGGCAGGCATTTACATGGCCTTAAGGTGATGTTTTATAAGTGG
GAAATCGCAAGTGGAGTATGGGAATATAGGGGTGACGGCGTGATTATCAG
GGTGTGCTGCAGTCATCAGGTGAGTATTGTGAGCGTTCCACTGCTTTTGT
CCCCGAATCGGTAGTTAGGGGTGGGCAGCTGCAGCTGGCGCCTTTTCGGG
TGTGCTTTCGTTTGTTTGCTATAGTATCACCGTTGTGCGCTCATTATGTT
TCGTTCACGCTTGTGTGTGTGTGTGTGTGTGTGTACATGAAATGCACCTG
TAGCGACGTATGCAGATGTTGATGCTGGTGCTCTCCTTTTTATGCTTGGG
CAAGTTGTGCCCACGTTGTTTGTAGATGCTGCTTTACCATGCAGCGGCGA
GGCTTTTCTTTGCGTGTCAGTATACAACAGCATCGCTCTGTACTGTGCTG
TTTTAGGACCCTTGTGTAATGTATGGGCAGTAGTAATAGTACTAGCAGCA
ATTGTTCGCGTGCTGCTCCTCGAGCTCCACGGCTAAGGCCGCAGCGTCGG
CCGTCGGCATCTCCGACATCTCCTTTCGCCAACCGTTGCTGTTACTACTG
TACCTGCGTTTCTCTTTTTTTTGACGCACCAGCCGCAGCAGGAGCAGGCA
CTCGCGCTGAACGGACAAGGACCAAGAAGCACTAAAGGTTTAACGGTTCC
ACGATCTTGAATGCCGTAAGTAACGAGCCGGTTCAATCTTGCCAACCGAC
AACACGACATACCATCTGACATGATGCAGAAACCAACACTGTTTGCACGC
ATGCTGACGGCGGGCTTGGGGGGGTGTCGCTCGCTCCCTGGTAACGCTGC
TCTTGATCTACTGTATCGATGGATGGATCGGGAACAAAGGCGGCCTGGGT
ATCTACCTACCCTATGGGTGCAGGGGGTCTGGTCTATATGGGAGATCTTG
GGCTCTGCGGCGGCGGTGGGGGCAGAGGAGTGAGTGCTCTATTTTTGTCG
TGTATGCGGTGTTCGAGGTTGCAAGTCGCGTAGCCTTTGTCTTGTCGCCC
CGGCGCGGGCAGTTGCTAGTGATTTTTGATCGATGCACTTTTTTTTGTGC
GCGCTACTTTATAGCGGCCGCGTACCCTTGGCGGCGGCTCGAGGTGATTT
GATTGGTGTAATTGTAGTCTTTGAAGTGCCGTCAGAAGAAGCGACATAAC
TCACATGCCCGCTATGCGAACTGGCGATGAAAACATGGAAACATATAGGT
CAATAATCCAGAGCGGGTTTGTCTTGTAACATCTGGGATGCGGCGTCGGA
TGCCACAAGCTGCAGACACACGTAACAAACCCAAGCCTTTGCTTATTCTT
GTGGTAGATAGAGGCGAAGTCGGCTAGCAATGTTTTGTGTGGTGTGGTGT
GGTGTTGTGGGATGTATTTTGTTACTGGCGATGAAGCGGTCAGTGTTTTG
CGTTTCGGGGCCGATTTGCGCATGCGACATTTTTTCCAGTGTTCACATTG
TCCTTTTTTCGGAACAGTTTAGGAGTATAGGCGTAGAGTAAGTAGGCACG
AGGACGCGCGTGTAGGGAGGCCGATAAAAATAGGTGGCGCGCAGTTTTGT
CACGTGTAAAGGTCGAAATCACATTTGAAAGTTTCTCATGATGTAGGTGA
AGAATATGTTTCTGAAAAGCGTACAGTAATCGTCTCAATTGCTCGATCAA
CAAACAATAGTTGGTTGCACTGTTGTGTCTGTCTGTCTGTTGTTTGTCTG
TCGTCATCCAACTTGTTGGTATATATATATATATATATATATATATATAT
ATATATATTTATACGAGTAGTAACAGACGGTCAGAAAGGTGCGGGTCAGA
ATTCTCTCTTTTTTTTTGCCCTCGGAATACGTACCCCATATAAGGATCGA
TCCATCACAATCAGGTGTGGGCTGTCCGGAGTGCTCGCTGGCGGGCGGAG
TTCCTACCTGCGGGGTAGGCTCGAGAGATCTCTTGTACCGTATAATTACA
CAGGTGTCCCCGCGCGGTCATGATCTGGTCTGGGTCGTGATGAGAGACTG
ACTGACTGACTGACTGACTGACTGACTGACTAGCTGACTGGGGAGGGGTT
CCGTGAAGCAAGTACCGTGTCTGGGTCTGTAAACCTGGGGGACTGGAGTT
CTGGCTGGGATGGTGGATGATGATCTGTGGATGCGGAGAAGGAAAGAGAA
GAGAAGAGAAGAGAAGAACGCCGGTGGTGGTCGATGTTCTGTGACCTGTG
AATTGTGGCCTGTGGGGATATTCTATTGTTTTTCGGGATCTGGTCTGGTC
CGGTCTGGTCTGGCGGCAGAAGGTCTGGATAATAAAAAGTACCGGCCTGG
AACTGGACCTACCGTGAGCAGACACAGCCATGGGGGCGTGCTTGAGGAAT
CGGCGGTATGAATGCATGAAGGAATGAATACATAAATGCAGTGAATATAG
CGGTGTATCTTGGGGGGGTAATTTGCACATTTGAACCATGATCAATTCTC
AAAGTGATCGCTGTTGTTTATGGTACCCGTCCGTAACGCGCCGCTCCCAC
GCCCACTAACATCTACCTTGTGTTGGAAACAAATTATGTGGTTATGTTGG
TCACCTACGACTATCCGCTGTCTGATAGTGTGCATTGCGCGTCGCTCGGG
ATTTGATGTTGCCTATTGGTTGCTTTTTTCTGGCGAATCTCTTGTCATTG
GGAGAGAGGCGTCGCAGGCCGGTGATTTGTTTTGAGTTGAACAGCCGCTA
TTGCTGCCAAAAAAATCGATACAATGCACCGTGCTACTGTTACTGTACCC
TTTAAGACCTTGGTTCGCTTCTCGTGCGACGACAGCCCGTTATTTTTTGT
CTTGATGACGCTCTTCGCAATCATGTTTTCTCCCTCCCCAATCCCCAACT
GGGTGCCGCTACTGACCGGGGTGCCGTTGTTGCGACTCACTCGAACATCC
CCTAGTGCTTGTCCGCGACACGCGCAGACCTTGGACAGAACGACAACCGT
GGCATCGCCGGGGTGCAGGTATCCTTCGAGGGGGAATAGCCGCAGCGTGA
TGCAATCCTGTGTGTTTTATTGTATTTCTGCGGAGTCTGGAGCGTTGCGA
CTCAAAATCTAGCCAGGTGGTGCTCGTTGCCCTGTCAAACGAAAAGCGAT
TGGATTCAGTAGCAAATACTTTTTTTACAATTTGTTTTGTTTTGTTTTTT
TCTAATGCGTCTTGCCCTTCTGCTCTTCTGAAGAGCTTGTGTTGCGTATC
TAGACACGAGTTTCGGAAGCGTTGGCGTGGCGTCCGGCTTTTGATTGCGT
TGCGGTGCAGACGATCGTCGTTTGATATGCTCTCGCGTGCTGAGATTGTG
GAATGGAGATTGTGCTGACGCGCGCATATACGCTGAGGAACCGCGCTGTC
GAGTCCCCTCCTGCCAACCGTGAATAGGAACAATCGGGACAGATGGTGAA
GTTGATGCCCAAATAGCTGTGTGCGGTCACCTAGTGCGATTGAAGTTATG
GTTGTGTGTAGTGTTTTTTGTATTGAACTCGAAATAATTTCGCTTGCGTG
GGGTTAGCCGCGGCTAATGCTTGTATGCTCAAAGCTCGAGGTCTATCATC
AAAATTAAGTTAAGGGATTTGCCTAGCGCATCATCGCACGGGTAAAATCT
GGTGTAGGCGACTTCTGGTAGATAGCGTAGCTGCAGGTTTCACTGCTTGG
TTCGGTAACCCAGGTAGTCCAGGAGTAGAGTCCATACCGGTGCTGTTCGA
TGATAAGGCTCTGGCAGGTAATGATGATGGTTTGCTTTATTTACTTGATT
TTTCGGGAAGTAGTCCGATGATACGGTTGGTGGGTACTGCGGTGAATATG
GAAAACGCAAAGCAAAACCAACTGTTGTTTTTCATGCTCATCGATGAGTT
TTACTGGTCCTCGACAACGGCATGGTGTCTGAACGATAGCAAGTTCTTTG
TTTGCAAACTATCTGGCCCATGCCACATGGATCCCGTTGGAGACGTGGAT
CAGATACAAGTAATCTAAAATGTTTTCTAGGTAAGGTACTCACGTCTTTC
TGCCTGAAGCAGCCTATACGTTACACACAAAGGAAATATTGGAGGCACGT
CTCTTGCCCTCTTACGTTCCATCTCATGAGAGGTTCACCATAATCGATTG
GCTCGAAGGACAAAAATGTGCACCACGCCGCTGAATTACCTCACCTTTCT
TACGCTTTCTCCCATACTCTAACCCTAACCTCAATCCTCATATTATTCAT
ACCACGCAGCCTTTACGGTAAACCCTCTAACCTCTGGTAAATGACGTTTT
AGCGTGTGGGATTCGTCACGATTTTACACAAGTATTGTTCCGGTATGTTG
AC back to topCoding sequence (CDS) from alignment at H-paniculata_contig314:4504..15405+ >mRNA_H-paniculata_contig314.8483.1 ID=mRNA_H-paniculata_contig314.8483.1|Name=mRNA_H-paniculata_contig314.8483.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1230bp|location=Sequence derived from alignment at H-paniculata_contig314:4504..15405+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGATTCGCTTTCATCGAATTTGACGACCAGCGTGATGCCGAGGATGC
TGTTGCTGATGGGATTCGCTTTCATCGAATTTGACGACCAGCGTGATGCC
GAGGATGCTGTTGCTGAGATGGATGGACGAGAATTTGACGGAGCTCGCAT
TGTGGTTCAACGTGGTCGCGGACACCGGCCCAACGGCCCTAAGTTCGCTT
CCCGTCGAACGGAGCATCGGGTCGTCGTGGAGGGACTAGATTCTCGCACC
AGTTGGCAGGACCTTAAGAGATGGATGGACGAGAATTTGACGGAGCTCGC
ATTGTGGTTCAACGTGGTCGCGGACACCGGCCCAACGGCCCTAAGTTCGC
TTCCCGTCGAACGGAGCATCGGGTCGTCGTGGAGGGACTAGATTCTCGCA
CCAGTTGGCAGGACCTTAAGGATTTCGGCCGCCAAGCGGGACAGGTTCTC
TACAGTGATGTCTTCATCCGTCACGGCCGTCGCTGGGGATTTCGGCCGCC
AAGCGGGACAGGTTCTCTACAGTGATGTCTTCATCCGTCACGGCCGTCGC
TGGGGCGTAGTGGAGTACTTGTCGAGGGACGACATGAAGGCGGCCGTTCG
CACCCTGGACGATACGCGCCTGGGCGGAAAGTACATAAGGGTAAAGGAGG
CGTAGTGGAGTACTTGTCGAGGGACGACATGAAGGCGGCCGTTCGCACCC
TGGACGATACGCGCCTGGGCGGAAAGTACATAAGGGTAAAGGAGGAGAAT
CCGAGTCGTGACAGCCGCTCCCGCAGTCGCTCTCACTCTCGCCGCTCTCG
CAGTGATTCTCGGTCCCCCCCCGCGCGGAGGCGCCGGTCTCGTGACCGCC
GCTCACCTTCACCCGACGCCAGGGATGACAAAGACAGGGGCAGAGACAGG
GGCCGCCGCCGCGAGCGCGACTACAGCCGCAGTCGCAGCCGCTCCCCCGC
CCGGCACAGGAGAATCCGAGTCGTGACAGCCGCTCCCGCAGTCGCTCTCA
CTCTCGCCGCTCTCGCAGTGATTCTCGGTCCCCCCCCGCGCGGAGGCGCC
GGTCTCGTGACCGCCGCTCACCTTCACCCGACGCCAGGGATGACAAAGAC
AGGGGCAGAGACAGGGGCCGCCGCCGCGAGCGCGACTACAGCCGCAGTCG
CAGCCGCTCCCCCGCCCGGCACAGCCGCAGCAGGAGCAGGCACTCGCGCT
GACCGCAGCAGGAGCAGGCACTCGCGCTGA back to top
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