mRNA_H-paniculata_contig31114.8415.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: D8LT56_ECTSI (Decapping nuclease n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LT56_ECTSI) HSP 1 Score: 217 bits (552), Expect = 1.090e-66 Identity = 103/134 (76.87%), Postives = 114/134 (85.07%), Query Frame = 1
Query: 1 EEEAAHFITYRNNMNKILATPYGKQKWEMEVFKEDGMIYLEVVSLDRNNRAKMDRTSYWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGRFVEIKTTKLIRDAK 402
EEEAAHFITYRNN+NKIL TPY KQKWEMEVFKE G+IYLEVV +RN + K+DRTSYWGRRFETLCVLGVEG D+ QR PGD RPSYC LYRSRLG HN++MGAEIDA P + GRFVEIKTT+LIRD+K
Sbjct: 174 EEEAAHFITYRNNLNKILVTPYSKQKWEMEVFKEGGVIYLEVVMTNRN-QGKLDRTSYWGRRFETLCVLGVEGARLDELQRGPGDLPRPSYCGLYRSRLGSHNLLMGAEIDACRPGDPGRFVEIKTTRLIRDSK 306
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: A0A6H5JPT0_9PHAE (Decapping nuclease n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JPT0_9PHAE) HSP 1 Score: 208 bits (529), Expect = 1.120e-64 Identity = 103/146 (70.55%), Postives = 114/146 (78.08%), Query Frame = 1
Query: 1 EEEAAHFITYRNNMNKILATPYGKQKWEME------------VFKEDGMIYLEVVSLDRNNRAKMDRTSYWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGRFVEIKTTKLIRDAK 402
EEEAAHFITYRNN+NKIL TPY KQKWEME VFKE G+IYLEVV +RN + K+DRTSYWGRRFETLCVLGVEG D+ QR PGD RPSYC LYRSRLG HN++MGAEIDA P + GRFVEIKTT+LIRD+K
Sbjct: 38 EEEAAHFITYRNNLNKILVTPYSKQKWEMEHPPLRLDNDPSKVFKEGGVIYLEVVMTNRN-QGKLDRTSYWGRRFETLCVLGVEGARLDELQRGPGDLPRPSYCGLYRSRLGSHNLLMGAEIDACRPGDPGRFVEIKTTRLIRDSK 182
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: A0A803LUB8_CHEQI (Decapping nuclease n=1 Tax=Chenopodium quinoa TaxID=63459 RepID=A0A803LUB8_CHEQI) HSP 1 Score: 107 bits (268), Expect = 2.660e-25 Identity = 57/130 (43.85%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 7 EAAHFITYRNNMNKILATPYGKQK-WEMEVFKEDGMIYLEVVSLDRNNRAKMDRTS-YWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
E HF+TYRNN+NKILAT Y + + WEM V K G+IYL+V L + ++DR YWG FETL E DD + + A YCA+ +++LG H I+MGAE+D + + GR +VE+KT++
Sbjct: 118 ENMHFVTYRNNLNKILATAYIRNEPWEMGVHKRKGVIYLDVHKLPERPKTELDRRMCYWGYCFETLAT---EDPTRDDGEGIHHIDANVEYCAVIKTKLGAHRILMGAEMDCYDSPDDGRKFYVELKTSR 244
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: UPI001F5DA612 (NAD-capped RNA hydrolase DXO1-like n=2 Tax=Lolium rigidum TaxID=89674 RepID=UPI001F5DA612) HSP 1 Score: 108 bits (270), Expect = 4.140e-25 Identity = 55/129 (42.64%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 16 HFITYRNNMNKILATPYGKQKWEMEVFKEDGMIYLEVVSLDRNNRAKMDRTS-YWGRRFETLCV---LGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
HF+TYRNN+NKILAT Y K+ W+M V K DG++YL+V L ++K+DR +WG FE L +G +G G D A YC++ +++LG H I+MGAE+D + GR +VE+KT++
Sbjct: 238 HFVTYRNNLNKILATAYIKEPWKMGVHKRDGVVYLDVHKLPERPQSKIDRRRCFWGYSFENLATENSIGEDGRGID---------ANVEYCSVIKTKLGAHRIIMGAEMDCCDATNDGRRFYVELKTSR 357
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: A0A452Z182_AEGTS (Decapping nuclease n=1 Tax=Aegilops tauschii subsp. strangulata TaxID=200361 RepID=A0A452Z182_AEGTS) HSP 1 Score: 102 bits (253), Expect = 1.920e-24 Identity = 52/129 (40.31%), Postives = 80/129 (62.02%), Query Frame = 1
Query: 16 HFITYRNNMNKILATPYGKQKWEMEVFKEDGMIYLEVVSLDRNNRAKMDRTS-YWGRRFETLCV---LGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
HF+TYRNN+NKILAT Y K W+M V K +G++YL+V L +++++R +WG FE L + +G+G D A YC++ +++LG H IVMGAE+D ++ GR +VE+KT++
Sbjct: 75 HFVTYRNNLNKILATAYLKDPWKMGVHKRNGVVYLDVHKLPERPQSEIERRRCFWGYSFENLATENSIDEDGSGID---------ANVEYCSVIKTKLGAHRIVMGAEMDCCDSTDDGRRFYVELKTSR 194
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: A0A251VAT4_HELAN (Decapping nuclease n=2 Tax=Heliantheae alliance TaxID=911341 RepID=A0A251VAT4_HELAN) HSP 1 Score: 107 bits (266), Expect = 2.080e-24 Identity = 56/127 (44.09%), Postives = 80/127 (62.99%), Query Frame = 1
Query: 16 HFITYRNNMNKILATPYGKQK-WEMEVFKEDGMIYLEVVSLDRNNRAKMDRT-SYWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
HF+TYRNN+NKI+AT Y + + WEM V K G++YL+V L R++ DR SYWG FETL E DD + + A YCA+ +++LG H I+MGAE+D ++ GR +VE+KT++
Sbjct: 309 HFVTYRNNLNKIMATAYLRHEPWEMGVHKRKGVVYLDVHKLPERPRSERDRRMSYWGYCFETLAT---EDPRRDDGEGIHHVDANVEYCAVIKTKLGAHRILMGAEMDCCDSTDDGRRFYVELKTSR 432
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: A0A830C771_9LAMI (Decapping nuclease n=1 Tax=Phtheirospermum japonicum TaxID=374723 RepID=A0A830C771_9LAMI) HSP 1 Score: 103 bits (258), Expect = 2.780e-24 Identity = 55/132 (41.67%), Postives = 82/132 (62.12%), Query Frame = 1
Query: 16 HFITYRNNMNKILATPYGKQK-WEMEVFKEDGMIYLEVVSLDRNNRAKMDRTS-YWGRRFETLCVLGVEGTGHDDRQRVPGD-----PARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
HF+TYRNN+NKILAT Y + + WEM V K +G++YL+V L ++++DR YWG FETL +D RV G+ A YC++ +++LG H I+MGAE+D ++ GR +VE+KT++
Sbjct: 152 HFVTYRNNLNKILATAYIRNEPWEMGVHKRNGVVYLDVHKLPERPKSELDRRRCYWGYSFETLAT--------EDPNRVDGEGIHHVDANVEYCSVIKTKLGAHRILMGAEMDCCDSTDEGRRFYVELKTSR 275
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: UPI00125D723C (decapping nuclease DXO homolog, chloroplastic n=2 Tax=Ipomoea TaxID=4119 RepID=UPI00125D723C) HSP 1 Score: 106 bits (264), Expect = 3.580e-24 Identity = 54/131 (41.22%), Postives = 81/131 (61.83%), Query Frame = 1
Query: 16 HFITYRNNMNKILATPYGKQK-WEMEVFKEDGMIYLEVVSLDRNNRAKMDRTS-YWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTKLIRD 396
HF+TYRNN+NKI+AT Y + + WEM V K G++YL+V L ++++DR YWG FE+L E G D R+ A YCA+ ++++G H I+MGAE+D + GR +VE+KT++ + D
Sbjct: 280 HFVTYRNNLNKIMATAYIRNEPWEMGVHKRKGVVYLDVHKLPERPKSELDRRRCYWGYCFESLAT---EDPGRSDGDRIHDIDANVEYCAVIKTKIGAHRILMGAEMDCCDSRDDGRRFYVELKTSRELLD 407
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: A0A1E5UIZ4_9POAL (Pentatricopeptide repeat-containing protein n=1 Tax=Dichanthelium oligosanthes TaxID=888268 RepID=A0A1E5UIZ4_9POAL) HSP 1 Score: 106 bits (265), Expect = 3.620e-24 Identity = 55/130 (42.31%), Postives = 80/130 (61.54%), Query Frame = 1
Query: 4 EEAAHFITYRNNMNKILATPYGKQKWEMEVFKEDGMIYLEVVSLDRNNRAKMD-RTSYWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
+ HF+TYRNN+NKILAT Y ++ W+M V K G++YL+V L +++MD R YWG FE L E + +D G A YC++ +++LG H IVMGAE+D ++ GR +VE+KT+K
Sbjct: 113 QNTIHFVTYRNNLNKILATAYVREPWKMGVHKRRGVVYLDVHKLPERPKSEMDHRRCYWGYSFENLAT---ENSSSEDGG---GIDANVEYCSVIKTKLGAHRIVMGAEMDCCDATDDGRRFYVELKTSK 236
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Match: UPI001CB947C1 (NAD-capped RNA hydrolase DXO1 n=1 Tax=Erigeron canadensis TaxID=72917 RepID=UPI001CB947C1) HSP 1 Score: 105 bits (263), Expect = 5.020e-24 Identity = 56/130 (43.08%), Postives = 79/130 (60.77%), Query Frame = 1
Query: 7 EAAHFITYRNNMNKILATPYGKQK-WEMEVFKEDGMIYLEVVSLDRNNRAKMDRT-SYWGRRFETLCVLGVEGTGHDDRQRVPGDPARPSYCALYRSRLGGHNIVMGAEIDAHLPSESGR--FVEIKTTK 384
E HF+TYRNN+NKI+AT Y + + WEM V K G++YL+V L R DR SYWG FETL E DD + + A YCA+ +++LG H I+MGAE+D ++ G+ +VE+KT++
Sbjct: 286 ENMHFVTYRNNLNKIMATAYLRHEPWEMGVHKRKGVVYLDVHKLPERPRGDRDRLMSYWGYCFETLAT---EDPRRDDGEGIHDVDANVEYCAVIKTKLGAHRILMGAEMDCCDSTDDGKRFYVELKTSR 412 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31114.8415.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31114.8415.1 >prot_H-paniculata_contig31114.8415.1 ID=prot_H-paniculata_contig31114.8415.1|Name=mRNA_H-paniculata_contig31114.8415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=134bp EEEAAHFITYRNNMNKILATPYGKQKWEMEVFKEDGMIYLEVVSLDRNNRback to top mRNA from alignment at H-paniculata_contig31114:260..2263+ Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31114.8415.1 ID=mRNA_H-paniculata_contig31114.8415.1|Name=mRNA_H-paniculata_contig31114.8415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2004bp|location=Sequence derived from alignment at H-paniculata_contig31114:260..2263+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31114:260..2263+ >mRNA_H-paniculata_contig31114.8415.1 ID=mRNA_H-paniculata_contig31114.8415.1|Name=mRNA_H-paniculata_contig31114.8415.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=804bp|location=Sequence derived from alignment at H-paniculata_contig31114:260..2263+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |