mRNA_H-paniculata_contig3109.8407.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: D7FUW2_ECTSI (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=D7FUW2_ECTSI) HSP 1 Score: 500 bits (1288), Expect = 2.670e-173 Identity = 247/306 (80.72%), Postives = 272/306 (88.89%), Query Frame = 2
Query: 356 MAPSNQKAKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPSSIT 1273
MAP N + K+PL+HLVAGG+AGVVESSCCHPLDT+KTRMQLR KGGS +GP+ TA+ I+ EGF ALYKGLSAV+ GI PKMAVRFTSFE YK WLG +GN+G+VFLAGLGSGVTEA++VVTPAEVCKIRMQAQFHS+LDPE+MA RKYRNVLQTA VV REEGVGALYKGL PT LRQGCNQAVNFTCY+MFK +LS YTG E LA WQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVI GQAPKY GFV ++ L+AKEEG++ALWKGLTPRLMRIMPGQAITFMTYEWVSKRLP+S T
Sbjct: 1 MAPRNDR--KNPLMHLVAGGVAGVVESSCCHPLDTVKTRMQLRIKGGSTKGPLRTASSIITKEGFLALYKGLSAVMMGIVPKMAVRFTSFETYKEWLGASP-TGNKGLVFLAGLGSGVTEAIVVVTPAEVCKIRMQAQFHSLLDPEEMARRKYRNVLQTAVVVAREEGVGALYKGLAPTVLRQGCNQAVNFTCYQMFKTQLSLYTGSEELASWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASFT 303
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: A0A6V1U9P6_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9P6_HETAK) HSP 1 Score: 433 bits (1113), Expect = 1.410e-146 Identity = 218/302 (72.19%), Postives = 250/302 (82.78%), Query Frame = 2
Query: 356 MAPSNQKAKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSG-NRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1258
MA S +K PL+HL+AGG AG+VES+CCHPLDTIKTRMQLRA GS GPI TATRIV +EGFFALYKGL+AV AGI PKM RFTSFE YK +L ++G V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+HSM+DP +A RKYRNVLQTA V+VREEG GALYKG++PTTLRQGCNQAVNFTCY++FK++ + +GRE LAPWQHML+GGLSGG GP NNPLDVVKTRLQKQ V GQ PKY G ++ ++AKEEG+ ALWKGLTPRLMRIMPGQAITFMTYE+VSK +
Sbjct: 1 MAGSKSSERKHPLMHLIAGGSAGLVESTCCHPLDTIKTRMQLRATAGSTIGPIQTATRIVTNEGFFALYKGLTAVWAGIIPKMMTRFTSFEMYKDFLRKTPDENLSKGKVLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATRKYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQKQRVEPGQRPKYTGLGQAVVVIAKEEGVLALWKGLTPRLMRIMPGQAITFMTYEFVSKHV 302
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: A0A836CM83_9STRA (Mitochondrial carrier domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CM83_9STRA) HSP 1 Score: 428 bits (1100), Expect = 1.680e-144 Identity = 212/294 (72.11%), Postives = 248/294 (84.35%), Query Frame = 2
Query: 377 AKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1258
AKK PL+HL+AGG AG VESS PLDTIKTRMQLRAKG S GPITTA RI+ +EGFF+LYKGL+AV+AGI PKMAVRF+SF+ +K WLG G + VFLAGLGSGVTEAV+VVTPAEVCKIRMQAQ+HSMLDPEQMA RKYRNV+QTAG++V+EEG+GALYKG++PTTLRQGCNQAVNF+ Y++FK K + L WQHML+GGLSGG+GP VNNPLDVVKTRLQ+QVVI G+ PKY G + ++AKEEG+ ALWKGLTPRL+RIMPGQAITF TYE+VSK++
Sbjct: 16 AKKHPLIHLIAGGAAGAVESSVLFPLDTIKTRMQLRAKGRSAYGPITTAQRIIKNEGFFSLYKGLTAVMAGIVPKMAVRFSSFDLFKTWLGCLDGKDKK-RVFLAGLGSGVTEAVMVVTPAEVCKIRMQAQYHSMLDPEQMARRKYRNVIQTAGLIVKEEGIGALYKGVVPTTLRQGCNQAVNFSFYQIFKTKWEAARDGKELIAWQHMLIGGLSGGMGPVVNNPLDVVKTRLQRQVVIPGEVPKYRGLGQGMAVIAKEEGVLALWKGLTPRLLRIMPGQAITFATYEFVSKKI 308
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: D8LI49_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LI49_ECTSI) HSP 1 Score: 417 bits (1073), Expect = 6.350e-141 Identity = 215/296 (72.64%), Postives = 246/296 (83.11%), Query Frame = 2
Query: 395 VHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPSSI-TGV 1279
+H GG AGVVESSCCHPLDTIKTR QL + P A R+V +EG FALY+GLSAV+AGI PKM+VRF+SFE YKGWLG +G ++G+VFLAGLGSGVTEAV+VVTPAEVCKIRMQ+Q ++ ++ KYR+VLQTA VVVREEGV ALYKGL PT LRQGCNQAVNFTCY++FK KLS+ G E LAPW HMLLGGLSGGIGPCVNNPLDV KTRLQ+QV+I GQAPKY GFV ++ L+AKEEG++ALWKGLTPRLMRIMPGQAITFMTYEWVSKRLP+S+ TGV
Sbjct: 4 LHGTYGGAAGVVESSCCHPLDTIKTRTQL-----TSLSPAIVAKRLVKNEGVFALYRGLSAVMAGIVPKMSVRFSSFELYKGWLGAAEGH-SKGLVFLAGLGSGVTEAVMVVTPAEVCKIRMQSQSLQVIADG--SSGKYRDVLQTATVVVREEGVRALYKGLAPTVLRQGCNQAVNFTCYQVFKTKLSDLLGTEELAPWHHMLLGGLSGGIGPCVNNPLDVSKTRLQQQVLIPGQAPKYGGFVSAISLIAKEEGVKALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPASLGTGV 291
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: W7U0T5_9STRA (Succinate fumarate mitochondrial transporter n=2 Tax=Monodopsidaceae TaxID=425072 RepID=W7U0T5_9STRA) HSP 1 Score: 395 bits (1014), Expect = 2.730e-131 Identity = 206/306 (67.32%), Postives = 235/306 (76.80%), Query Frame = 2
Query: 362 PSNQKA-----KKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPS 1264
P+ QKA KK+ + HL+AGG AG VESS CHPLDTIKTRMQLR GGS G TA RIV E F ALYKGL+AV GI PKMAVRF+SFEAYK +L G + FLAGLGSGVTEAVLVVTPAEVCKIR+QAQFHSM DP Q+ANRKYRNVLQTA VV REEG+GALYKG++PT +RQG NQAVNFT Y+ K E R+ L PW+ ML GGLSGG+GP VNNPLDVVKTRLQKQ ++ GQ PKY G ++ ++ EEG+ ALWKG+TPRLMRIMPGQAITFMTYE+VS+ + S
Sbjct: 18 PATQKAVSTPKKKTFVHHLIAGGAAGFVESSICHPLDTIKTRMQLRQAGGSTHGLFMTAFRIVQKESFPALYKGLTAVYMGIVPKMAVRFSSFEAYKSYLAGADGKVSPVGTFLAGLGSGVTEAVLVVTPAEVCKIRLQAQFHSMADPVQLANRKYRNVLQTAVVVAREEGIGALYKGVVPTVMRQGINQAVNFTTYQAVKTAWLERQQRKELLPWESMLFGGLSGGLGPLVNNPLDVVKTRLQKQRIVEGQLPKYRGIFQAIPVIVSEEGVLALWKGITPRLMRIMPGQAITFMTYEFVSRHMKS 323
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: B7GCT1_PHATC (Predicted protein n=2 Tax=Phaeodactylum tricornutum TaxID=2850 RepID=B7GCT1_PHATC) HSP 1 Score: 380 bits (977), Expect = 6.700e-126 Identity = 194/299 (64.88%), Postives = 233/299 (77.93%), Query Frame = 2
Query: 380 KKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKG--GSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRG----MVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1258
KK PL HL+AGG AG+VESS CHPLDTIKTRMQL A G + GPI TA RIV EG ALYKGL+AV GI PKMA+RF SFE Y+ +L G+ ++ + F AGL SG+TEAVLVVTPAEVCKIRMQ+Q+HSM+DP M +RKY NVLQTA ++V+EEG GALYKG++PT LRQGCNQAVNFT Y K+++ ++ G ++LA WQ +L+GGLSGG+GP VNNPLDVVKTRLQKQVV G+ KY G + ++AKEEG+ ALWKG+TPRLMRIMPGQAITFMTYE VS ++
Sbjct: 21 KKHPLQHLIAGGCAGLVESSVCHPLDTIKTRMQLPAAGVVQAPLGPIGTARRIVQREGLLALYKGLTAVYTGIVPKMAIRFVSFEQYREFLTARLGNADKSNATQITFTAGLFSGLTEAVLVVTPAEVCKIRMQSQYHSMMDPTAMQHRKYTNVLQTAMLIVKEEGAGALYKGVVPTMLRQGCNQAVNFTAYSAIKQQVMQWQGTDSLASWQSLLIGGLSGGMGPVVNNPLDVVKTRLQKQVVAAGKPAKYTGLAQACVVIAKEEGVLALWKGITPRLMRIMPGQAITFMTYEAVSAQM 319
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: A0A6U4GJ12_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A6U4GJ12_9STRA) HSP 1 Score: 372 bits (956), Expect = 7.760e-123 Identity = 188/298 (63.09%), Postives = 228/298 (76.51%), Query Frame = 2
Query: 380 KKSPLV-HLVAGGIAGVVESSCCHPLDTIKTRMQLRA--KGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPE-QMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLS-EYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1258
K+ P HLV GG AG+VES CCHPLDTIKTRMQLR G +++GP+ T IV EGFF+LYKGL+AV+ GI PKMAVRF+S+E Y+ L + R VFLAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+HS+ DP + KYRNV QTA +VREEG+GALYKG+ PT RQGCNQAVNFT Y+ K +S + LA WQH+LLGGLSGG+GP NNPLDVVKTR+QKQV++ G+ PKY G + + ++A+EEG+ ALW+G+TPRLMRIMPGQAITFMTYE++ K L
Sbjct: 11 KRKPFAQHLVCGGAAGLVESFCCHPLDTIKTRMQLRVLTAGRARKGPLLTGVGIVQREGFFSLYKGLTAVVTGIVPKMAVRFSSYEQYRIMLDAEGDGAPRARVFLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSLKDPALRFEEVKYRNVFQTAYTIVREEGLGALYKGVGPTIARQGCNQAVNFTAYQSMKDWVSANFRDGGELASWQHLLLGGLSGGMGPLANNPLDVVKTRMQKQVILPGETPKYAGMISGIGVIAREEGVGALWRGITPRLMRIMPGQAITFMTYEFMQKNL 308
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: A0A7S3L1V8_9STRA (Hypothetical protein n=1 Tax=Amphora coffeiformis TaxID=265554 RepID=A0A7S3L1V8_9STRA) HSP 1 Score: 367 bits (941), Expect = 1.190e-119 Identity = 196/370 (52.97%), Postives = 237/370 (64.05%), Query Frame = 2
Query: 371 QKAKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAK----------------------GGSKR----------------------------------------------------GPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSGNRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1258
+ KK P++HLVAGG AG VESS CHPLDTIKTRMQLR + G S R GPI TA RI+ EGF ALYKGL+AV GI PKMA+RF SFE Y+ WL V G+ + G+ F AGL SG+TEA+L+VTPAEVCKIRMQ+Q+HSM+DP QM +RKY NV+QTA +VREEG+ ALYKG++PT LRQGCNQAVNFT Y K+K+ + + L WQ +++GGLSGG+GP VNNPLDVVKTRLQKQ+V G+APKY G + + L+AKEEG+ ALWKG+TPRL+RIMPGQAITFMTYE+ S +L
Sbjct: 5 ESKKKHPMLHLVAGGCAGFVESSVCHPLDTIKTRMQLRRQEASVEQVVVRVKSSLVEPAMRLGHSLRDPAAFMPSAAVAGAGGVHEPGLHMGSTPSAARTETVVVKPVKAPKGLVKAGMGPIGTAHRIIQREGFMALYKGLTAVYTGIVPKMAIRFVSFEQYRDWLQVATGAKSSGVTFTAGLASGLTEAILIVTPAEVCKIRMQSQYHSMIDPSQMQHRKYTNVVQTAFTIVREEGISALYKGVVPTMLRQGCNQAVNFTAYSAIKQKVMAHQKTDKLEHWQSLVIGGLSGGMGPLVNNPLDVVKTRLQKQIVHQGKAPKYTGLLQACVLIAKEEGVLALWKGITPRLLRIMPGQAITFMTYEFCSAQL 374
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: A0A1Z5JX09_FISSO (Solute carrier family 25 (Mitochondrial citrate transporter), member 1 n=2 Tax=Fistulifera solaris TaxID=1519565 RepID=A0A1Z5JX09_FISSO) HSP 1 Score: 362 bits (930), Expect = 3.280e-118 Identity = 196/362 (54.14%), Postives = 238/362 (65.75%), Query Frame = 2
Query: 356 MAPSNQKAKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKR----------------------------------------------------------GPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLG--VDKGSGNRGMV-FLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAPKYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRL 1258
MAP ++K K PL HL+AGG AG+VESS CHPLDTIKTRMQLR + + GPI TA RIV EGFFALYKGL+AV GI PKMA+RF SFE Y+ W+G + + GMV F AGL SG+TEA+LVVTPAEVCKIRMQ+QFHSM+DP Q+ RKY NV+QTA ++V+EEG+GALYKG++PT LRQGCNQAVNFT Y K+++ G ++L WQ +L+GGLSGG+GP VNNPLDVVKTRLQKQV+ G+ PKY G + + +EEG+ ALWKG+TPRL+RIMPGQAITFMTYE VS ++
Sbjct: 1 MAPDDKK--KHPLQHLLAGGAAGLVESSVCHPLDTIKTRMQLRRQSATVEKVVVKMRDSMMEPALRLQHSLQDPVLRTAGGLEPGIRMSGPTKLAHVTMHPHTVQAPLGPIGTARRIVEREGFFALYKGLTAVWTGIIPKMAIRFVSFEQYREWMGPPAQQYGVSAGMVTFTAGLASGLTEAILVVTPAEVCKIRMQSQFHSMMDPSQLQKRKYTNVIQTAFLIVKEEGLGALYKGVIPTMLRQGCNQAVNFTAYNYIKREVMARQGTDSLDSWQSLLIGGLSGGMGPLVNNPLDVVKTRLQKQVITPGKTPKYTGLGQACLKIGREEGVLALWKGITPRLLRIMPGQAITFMTYEAVSAQM 360
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Match: A0A6V1U9R0_HETAK (Hypothetical protein n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A6V1U9R0_HETAK) HSP 1 Score: 360 bits (923), Expect = 4.060e-115 Identity = 192/309 (62.14%), Postives = 229/309 (74.11%), Query Frame = 2
Query: 356 MAPSNQKAKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRGPITTATRIVNHEGFFALYKGLSAVIAGIAPKMAVRFTSFEAYKGWLGVDKGSG-NRGMVFLAGLGSGVTEAVLVVTPAEVCKIRMQAQFHSMLDPEQMANRKYRNVLQTAGVVVREEGVGALYKGLLPTTLRQGCNQAVNFTCYEMFKKKLSEYTGRETLAPWQHMLLGGLSGGIGPCVNNPLDVVKTRLQKQVVITGQAP-KYDGFVPSLRLVAKEEGIRALWKGLTPRLMRIMPGQAITFMTYEWVSKRLPSSITG 1276
MA S +K PL+HL+AGG AG+VES+CCHPLDTIKTRMQLRA GS GPI TATRIV +EGFFALYKGL+AV AGI PKM RFTSFE YK +L ++G V LAGLGSGVTEA+LVVTPAEVCKIRMQ+Q+HSM+DP +A RKYRNVLQTA V+VREEG GALYKG++PTTLRQGCNQAVNFTCY++FK++ + +GRE LAPWQHML+GGLSGG GP NNPLDVVKTRLQ AP +Y +R + +EEG L +G P ++ + + YE+ KRL ++ G
Sbjct: 1 MAGSKSSERKHPLMHLIAGGSAGLVESTCCHPLDTIKTRMQLRATAGSTIGPIQTATRIVTNEGFFALYKGLTAVWAGIIPKMMTRFTSFEMYKDFLRKTPDENLSKGKVLLAGLGSGVTEAILVVTPAEVCKIRMQSQYHSMMDPAAVATRKYRNVLQTAVVIVREEGPGALYKGVVPTTLRQGCNQAVNFTCYQIFKEQWLKRSGREELAPWQHMLIGGLSGGFGPAANNPLDVVKTRLQT-------APGRYANLADGVRTIYREEGGAMLLQGAAPTMVGYLWYGLTVYPGYEFF-KRLYVALAG 301 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3109.8407.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3109.8407.1 >prot_H-paniculata_contig3109.8407.1 ID=prot_H-paniculata_contig3109.8407.1|Name=mRNA_H-paniculata_contig3109.8407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=329bp MAPSNQKAKKSPLVHLVAGGIAGVVESSCCHPLDTIKTRMQLRAKGGSKRback to top mRNA from alignment at H-paniculata_contig3109:1857..9628- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3109.8407.1 ID=mRNA_H-paniculata_contig3109.8407.1|Name=mRNA_H-paniculata_contig3109.8407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=7772bp|location=Sequence derived from alignment at H-paniculata_contig3109:1857..9628- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3109:1857..9628- >mRNA_H-paniculata_contig3109.8407.1 ID=mRNA_H-paniculata_contig3109.8407.1|Name=mRNA_H-paniculata_contig3109.8407.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1974bp|location=Sequence derived from alignment at H-paniculata_contig3109:1857..9628- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |