mRNA_H-paniculata_contig3104.8395.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
|
Overview
Homology
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: D7FI55_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FI55_ECTSI) HSP 1 Score: 483 bits (1243), Expect = 3.210e-165 Identity = 250/394 (63.45%), Postives = 308/394 (78.17%), Query Frame = 1
Query: 1 MSGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADPNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKERLAEAAKRKKELENKHDEELQRVAKQQRALHECNQLRKATTLETYSALEELRDSREAEEVAEERAWDSLKEAQAVVASSFQEDKVNELRAAR*VLWDCYEEAVSSSKARAKRKAEKEFELASKDDAISKAATWVLTKQGSVKYDFMCRQVYGNLLHDEYVRRGPPMKSFAALHTPGDGPVTLATSIAYNHPRPMLLKAAKASAMQRLVARAGARGTSWDLLWDPETEIQYYVYHAGGGITTRYPK 1182
MSGMLD+REF++GVWNYCTYDT L+AK+LF IFDVD+RG++TM E DAM+RMLY S DADP+L+K LAVNGSGDED L+F EFL V++NY+V QPA +LQ+AIRRK+LGVKYWEKMT+ R KMF++YDQGDLTS QA+E IV A+QKERL E ++K E+ +HD ELQ+ A+++ ALHE NQ RK L ELRD+R A+EV EE AW +LKEA+AV+ S + E V++LR AR VLWD Y+ A+ SSK RA+ KAE+E ELASKDDA SKA W+ TKQG VK++F+CRQ YGNLLH YV++GPPM++FAALH P D PVTLAT IAY+HPRP +LK AK LVA AGARGT+WDLLWD E E +YY++ G T +YPK
Sbjct: 99 MSGMLDLREFIIGVWNYCTYDTTLVAKILFGIFDVDKRGRVTMAELDAMVRMLYGSPDADPDLLKALAVNGSGDEDALTFDEFLQAVQDNYEVAQPAFELQKAIRRKVLGVKYWEKMTKQRTKMFANYDQGDLTSVQAIEAIVSAKQKERLKELERKKAEIAAEHDRELQQAAEERIALHEDNQQRKK------HKLNELRDARPADEVEEENAWIALKEARAVIKSDYTESDVDDLRKAREVLWDSYDRAIRSSKTRARLKAERELELASKDDANSKADAWIQTKQGRVKHEFLCRQSYGNLLHKAYVKKGPPMQAFAALHAPDDAPVTLATRIAYDHPRPAMLKEAKTL----LVAEAGARGTAWDLLWDVEEENEYYLHVENDGSTKKYPK 482
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S1XZZ4_9STRA (Hypothetical protein n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1XZZ4_9STRA) HSP 1 Score: 170 bits (431), Expect = 3.590e-44 Identity = 117/359 (32.59%), Postives = 197/359 (54.87%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADPNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKERLAEAAKRKKELENKHDEELQRV-AKQQRALH-ECNQLRKATTLETYSALEELRDSREAEEVAEERAWDSLKEAQAVVASSFQEDKVNELRAAR*VLWDCYEEAVSSSKARAKRKAEKEFELASKDDAISKAATWVLTKQGSVKYDFMCRQVYGNLLHDEYVRRGPPMKSFAALHTPG-DGPVTLATSIAYNHPRPMLLKAAKASAMQRLV 1071
SGMLD++EF++G+WNYCTYD LM+K F IFD+D G++ + E DA++RML+ +++ D +L++L+ +GSG ++ EF A+ E + ++QPALD+Q+ +R K GVKYWEK T+ R+K F+++D + Q++ EIV+ + K + AE + K ++ QRV A Q+ A E Q ++ + ++R SR EE E +AWDSL+ + + + D++ E RA R +W Y++A ++ + K E+ + A + D +KA ++ + G F + YG + + + A L P D ++L T + +L A KA Q++V
Sbjct: 86 SGMLDLKEFMIGIWNYCTYDLKLMSKFAFSIFDIDLEGELNLHECDALMRMLFDTEETDHDLIQLIDSDGSGS---VTQDEFFAITESHPHMLQPALDMQRVLRTKFFGVKYWEKETKKRQKEFAAFDSLQNDARQSITEIVLIKYKAKQAEIQRLK--------DKRQRVFAMQEEAARIEAEQEQEVEKEILEERIADIRKSRVPEEEEELQAWDSLQLLHEQLTAPYTLDEIEEKRAKRAEMWAQYDDACEKARKTIQVKNEQRMDAA-ESDGKAKADDYLKSDTGKSLISFTTKTQYGVTVGQRWKEGNHMQRLLAPLLLPEHDQQLSLGTVLLTRVSNDPILNAIKAQEEQKVV 432
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S3UVV0_HETAK (Hypothetical protein n=2 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3UVV0_HETAK) HSP 1 Score: 149 bits (375), Expect = 3.340e-36 Identity = 123/428 (28.74%), Postives = 194/428 (45.33%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQD--ADPNLVKLLAVNGSGDEDE----------LSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKERLAEAAKRKKELENKHDEELQRVAKQQRALHECNQLRKATTLETYSALEELRDSREAEEVAEERAWDSLKEAQAVVASSFQEDKVNELRAAR*VLWDCYEEAVSSSKARAKRKAEKEFELASKDDAISKAATWVLTKQGSVKYDFMCRQVYGNLLHDEYVRRGPPMKSFAALHTPGDGPVTLATSIAYNHPRPMLLKAAKASAM-----------QRLVARA-----------------------GARGTSWDLLWDPETEIQYYVYH 1149
SG LD++EF +GVWNYCTYD L++KL FDIFDVD+ G++ + E DA+LRM++ ++ ADP L+ + + ++ +SF++F+ +E ++QPALDLQ A+R+K LGVKYWE T+ R +MF+ +D G SW+A+ EI+ ++K E ++ A H Q + L+ LR +R E E+RA L EAQA + + ++ + R R LW+ + +A ++A G +++F + YG LLH+++ P ++ A + G VT+ T +A R L A+ A +R VAR G + T W+ L D E + Y+ YH
Sbjct: 88 SGNLDLKEFCIGVWNYCTYDIRLVSKLAFDIFDVDKIGQLELCECDALLRMMWNPKNEMADPVLLGRIEEFADAEAEDTAKDAYKEKVISFEKFVEAIERYESIIQPALDLQHAMRKKFLGVKYWETKTQRRAEMFAEFDAGH-DSWEAINEILAKKRKXXXXXXXXXXXXXXXXXAERDLDFQREMAAHHRDRQAARKRKLQA------LRGARAEAEGREDRALAKLGEAQARLELDYAPAELGQRRKWRAHLWEAFAKAQGYAEAALXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRRRFEFDVKARYGKLLHEKWAHGNPLQQAGAGAFSSSGGEVTVGTRLALRFARARGLDRARELARRAVEDRHRAQEERRVARRFRDRRADKRQMFEDLRTELVEAFGTKDTKWEKLHDEERDASYW-YH 507
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S2CHR9_9STRA (Hypothetical protein n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2CHR9_9STRA) HSP 1 Score: 144 bits (363), Expect = 1.450e-34 Identity = 123/433 (28.41%), Postives = 210/433 (48.50%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDAD--------PNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKERLAEAAKRKKELENKHDEELQRVAKQQRALHECNQLRKATTLETYSALEELRDSREAEEVAEERAWDSLKEAQAVVASSFQEDKVNELRAAR*VLWDCYEEAVSSSKARAK-RKAEKEFELASKDDAISKAATWVLTKQGSVKYDFMCRQVYGNLLHDEYVRRGPPMKS-FAALHTPGDG-PVTLATSIAYNHPRPMLLKAAKASAMQ----------------------------------RLVARAGARGTSWDLLWDPETEIQYYVYHAGGGIT 1167
SG L+ EF VGVWNYCTYD L+ KL FDIFD+D++GK+ + E DA+LRM+Y D +++L+ VNG G E++ EF ++E + ++QPALDLQ+A+R+++LGVK+W+ +T R+++F++ D S ++++EI++ +QKER + + ++ L + + Q +K ++ +A ++ + EE AE+ A ++E + ++ F D+++E R AR L+ + +S A R+A + D ++ ++ +K G + F + YG + E+ RG +++ F TP +G + AT + R L AA+ A LVA T W+ LWDP++ Y+ YH G T
Sbjct: 90 SGALNFSEFAVGVWNYCTYDVRLITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDG---EVTIDEFSDLMETHLYILQPALDLQRALRQRLLGVKFWDGLTELRRQLFAAEDSLASNSIESMKEILVIKQKERESRQHQEEEALSEEEQAHILXXXXXXXXXXXEKQYQKKRRVQKLNA--QITE----EEKAEKLALAEVRECRLMLEEPFTFDQLSERRQAREALYSAANKLKDASLAALNVRQANERKNSIEVDRSVD---LFLQSKAGRNRLAFEVQLAYGREMA-EWCERGNSLRAVFTPFFTPTEGGTASTATGLVKRFTRAKNLSAARQGAHSAILNEFMAEHKTKLSETHASERANQQTFTEALFVELVAVFFGPDTEWEKLWDPDSSAPYW-YHIPSGRT 508
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S2G1T6_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2G1T6_9STRA) HSP 1 Score: 133 bits (335), Expect = 7.580e-32 Identity = 87/264 (32.95%), Postives = 152/264 (57.58%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDAD--------PNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKERLAEAAKRKKELENKHDEELQRVAKQQRALHECNQLRKATTLETYSALEELRDSREAEEVAEERAWDSLKEAQAVVASSFQEDKVNELRAAR*VLWDCYEEAVSSSKA 771
SG L+ EF VGVWNYCTYD L+ KL FDIFD+D++GK+ + E DA+LRM+Y D +++L+ VNG G E++ EF ++E + ++QPALDLQ+A+R+++LGVK+W+ +T R+++F++ D S ++++EI++ +QKER + + ++ L + + Q +K ++ +A ++ + EE AE+ A ++E + ++ F D+++E R AR L+ + +S A
Sbjct: 90 SGALNFSEFAVGVWNYCTYDVRLITKLAFDIFDIDQQGKLDLAECDALLRMVYDVPHLDNIEGPPSGKEIMELIDVNGDG---EVTIDEFSDLMETHLYILQPALDLQRALRQRLLGVKFWDGLTELRRQLFAAEDSLASNSIESMKEILVIKQKERESRQHQEEEALSEEEQAHILXXXXXXXXXXXEKQYQKKRRVQKLNA--QITE----EEKAEKLALAEVRECRLMLEEPFTFDQLSERRQAREALYSAANKLKDASLA 344
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: F0YJ91_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0YJ91_AURAN) HSP 1 Score: 134 bits (338), Expect = 9.330e-31 Identity = 72/173 (41.62%), Postives = 114/173 (65.90%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADPNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKERLAEAAKRK--KELENKHDEELQRV 516
SG LD EF++GVWN+ TYD L+AKL ++IFDVDR GK+ M E DAMLRM+Y +DP +++ + VN G+ +S +E ++E + ++ PA DLQ+ +R +ILGVKYWE ++ R+ FS YD G SW+++++I+ + + R+ E + + KE+E + E Q++
Sbjct: 7 SGFLDFNEFLIGVWNWNTYDASLIAKLAYNIFDVDREGKIDMAEADAMLRMVYNVPKSDPEILEKMDVNKDGN---ISLEELEQLIEVHNYILMPAFDLQRMLRIRILGVKYWEAESQRRRVYFSGYDAGAQESWESLKKILEIKHQARVEEEERNRNLKEMEIRERIEAQKL 176
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S2SD95_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SD95_9STRA) HSP 1 Score: 117 bits (293), Expect = 3.070e-27 Identity = 58/122 (47.54%), Postives = 83/122 (68.03%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADP--------NLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWE 345
SG LD EF VG+WNYCTYD L+ KL FDIFDVDR+G++ + E DA+LRM+Y +D + L+K + VNG G E++ EF ++E + ++ PA DLQ+A+R+++LG+KYWE
Sbjct: 105 SGALDFHEFCVGLWNYCTYDVRLITKLAFDIFDVDRKGRLDICECDALLRMVYDVEDLEEIEGPPDGKQLLKEIDVNGDG---EVTIDEFSDLMETHQYILSPAFDLQRALRQRLLGIKYWE 223
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A835YJN7_9STRA (EF-hand domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YJN7_9STRA) HSP 1 Score: 103 bits (258), Expect = 2.620e-20 Identity = 95/308 (30.84%), Postives = 148/308 (48.05%), Query Frame = 1
Query: 46 NYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADPNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGV----------------KYWEKMTRHRKKMFSS--------------------------YDQGDLTSWQAVEEIVMARQKERLAEAAKRKKELENKHDEELQRVAKQQRALHECNQLRKATTLETYSALEELRDSREAEEVAEERAWDSLKEAQAVVASS-FQEDKVNELRAAR*VLWDCYEEAVSSSKARAKRKAEKEFELASKDDAISKAA 840
N+CTYDT L+A+ +F IFDVD R +T+PE DA+LRML S DADP ++KLLA +G GD D + + EFLAV E++ QV++ + K+ H++ + SS GD SW+AVE ++ +++ R AE AKR+ E E Q +A +AL + + ++ +R EE+ EE W+ L+ A+ A++ + D +++ RAAR LW E A+++S A + ++ E+A+ DDA K A
Sbjct: 198 NFCTYDTRLLARYVFLIFDVDARAFITVPECDALLRMLAGSADADPAVLKLLAPHGDGDGDGIGYDEFLAVAEKHRQVLKVLVPHXXXXXXXXXXXXXXXXXXXXXXXXDVKKHGAANHVHKRSICSSGGXXXXXXXXXXXXXXXXXXXXDFKEVKGGDTGSWEAVEIVLEEKRQARAAELAKRRAEAE------AQLLAA--KALDDEVSEEEKERAXXXXXXXQVAGARSPEELKEEELWEELRLAREACANAAWTIDTLDDARAARARLWGAAEAAMAASDNAAAARLARQLEVATNDDAQHKVA 497
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S1CBQ9_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1CBQ9_9STRA) HSP 1 Score: 103 bits (257), Expect = 2.630e-20 Identity = 56/145 (38.62%), Postives = 91/145 (62.76%), Query Frame = 1
Query: 16 DIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADPNLVKLLAVNGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMTRHRKKMFSSYDQGDLTSWQAVEEIVMARQKER 450
D EF+VG+WN+ TYD M KL FDI+DVD G +T+PE ++++RML+AS L K LA + ++ + S +EF A+ + +++ PALD Q +RR +LG+ YW+ T+ R+ ++YD + V++I+ R++ER
Sbjct: 80 DFTEFLVGIWNFLTYDEDAMIKLCFDIYDVDGNGYLTIPELESLMRMLHASDRKAVKLKKHLAAADTDNDGQFSKEEFKALNRAHPELLAPALDTQDGLRRSLLGLGYWKDKTKWRQ---ATYDADE-----TVDQIIEKRERER 216
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Match: A0A7S1TRT1_9STRA (Hypothetical protein (Fragment) n=1 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1TRT1_9STRA) HSP 1 Score: 77.8 bits (190), Expect = 5.020e-12 Identity = 38/120 (31.67%), Postives = 73/120 (60.83%), Query Frame = 1
Query: 4 SGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLRMLYASQDADPNLVKLLAV---NGSGDEDELSFQEFLAVVEENYQVVQPALDLQQAIRRKILGVKYWEKMT 354
G+L+ EF+ ++ YC+Y+ + K FDI+D D G + + E +++ +Y ++ D ++++ +GSG +SF EF A ++ Q++ PA ++Q+ +R+K+ GVKYWE++T
Sbjct: 82 DGLLNFPEFISSLYYYCSYNYDGLVKYAFDIYDRDGSGSLEVDEIHTLVKFVYGKKELDDRTMRIINRVDHDGSGT---VSFIEFAAYNKKFPQILFPAFNMQEIVRKKVFGVKYWERLT 198 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3104.8395.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 18
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3104.8395.1 >prot_H-paniculata_contig3104.8395.1 ID=prot_H-paniculata_contig3104.8395.1|Name=mRNA_H-paniculata_contig3104.8395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=242bp MSGMLDIREFVVGVWNYCTYDTVLMAKLLFDIFDVDRRGKMTMPEFDAMLback to top mRNA from alignment at H-paniculata_contig3104:1560..10800- Legend: polypeptideCDSUTR Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig3104.8395.1 ID=mRNA_H-paniculata_contig3104.8395.1|Name=mRNA_H-paniculata_contig3104.8395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=9241bp|location=Sequence derived from alignment at H-paniculata_contig3104:1560..10800- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig3104:1560..10800- >mRNA_H-paniculata_contig3104.8395.1 ID=mRNA_H-paniculata_contig3104.8395.1|Name=mRNA_H-paniculata_contig3104.8395.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1452bp|location=Sequence derived from alignment at H-paniculata_contig3104:1560..10800- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |