mRNA_H-paniculata_contig31013.8387.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A6H5JH19_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JH19_9PHAE) HSP 1 Score: 143 bits (361), Expect = 7.640e-38 Identity = 70/94 (74.47%), Postives = 83/94 (88.30%), Query Frame = 1
Query: 4 WLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
WLYGMVML+EYFALIFVR+R SIVFFSR A LSF+AFH+YFYHFQ G+F LAA S F GMF+V++YVLQ++ELPA+ SGE+S D PRAH+VELP
Sbjct: 525 WLYGMVMLYEYFALIFVRARSSIVFFSRTAALSFVAFHVYFYHFQMGFFGLAAWSSFLGMFSVKLYVLQAIELPAYTSGEVSQDAPRAHFVELP 618
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7S3Y6C3_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3Y6C3_HETAK) HSP 1 Score: 94.4 bits (233), Expect = 3.520e-21 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 4 WLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
WL+G +MLWEY+ ++F+RSRG +FF R L F+ +H+YFY F GYF+L A + F M ++ LQ LE PA + GE+S PRA Y ELP
Sbjct: 176 WLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELP 269
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7S4DCY7_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S4DCY7_HETAK) HSP 1 Score: 94.4 bits (233), Expect = 1.450e-20 Identity = 46/94 (48.94%), Postives = 62/94 (65.96%), Query Frame = 1
Query: 4 WLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
WL+G +MLWEY+ ++F+RSRG +FF R L F+ +H+YFY F GYF+L A + F M ++ LQ LE PA + GE+S PRA Y ELP
Sbjct: 364 WLFGSMMLWEYYGMLFLRSRGGSLFFPRLCGLYFVGYHLYFYSFNYGYFDLLALAHFCLMLHAMLFTLQHLEAPALLRGEVSPAAPRAVYTELP 457
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A835YR56_9STRA (Uncharacterized protein (Fragment) n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YR56_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 5.000e-20 Identity = 47/93 (50.54%), Postives = 61/93 (65.59%), Query Frame = 1
Query: 7 LYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
L+GM++LWEY+ L+FVRS I FF R ML F A+H+YF+ GYF LAA S F + +Y + LE+PA GEIS + PRA +VELP
Sbjct: 123 LFGMMLLWEYYCLVFVRSAAGIAFFPRVTMLYFTAYHMYFFMNPMGYFGLAALSTFLLVLHAMLYTVTDLEVPALTRGEISAEHPRACFVELP 215
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7S2AJJ9_9STRA (Hypothetical protein (Fragment) n=1 Tax=Dictyocha speculum TaxID=35687 RepID=A0A7S2AJJ9_9STRA) HSP 1 Score: 79.3 bits (194), Expect = 1.570e-15 Identity = 39/95 (41.05%), Postives = 60/95 (63.16%), Query Frame = 1
Query: 1 MWLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
+W+YG+VM+WEY+++I++RS +I F R ++ F+AFH Y Y G++ +A + F M ++ L LE+PA E+S DQPRA Y LP
Sbjct: 168 LWIYGIVMIWEYYSMIYLRSAAAIYFLPRFTLVYFIAFHFYLYGTAYGFYPVALLTMFLAMCHSLVFCLTRLEVPASSRLEVSFDQPRALYTALP 262
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7S2SN08_9STRA (Hypothetical protein n=1 Tax=labyrinthulid quahog parasite QPX TaxID=96639 RepID=A0A7S2SN08_9STRA) HSP 1 Score: 72.8 bits (177), Expect = 6.210e-13 Identity = 37/93 (39.78%), Postives = 58/93 (62.37%), Query Frame = 1
Query: 7 LYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
++G+VM+ EYF++IF RS +I FF R M ++AFH+YFY G+ +A + +A +Y L+ E+ AF G +S +QPR+ Y E+P
Sbjct: 370 IFGLVMICEYFSMIFARSLLTIQFFPRVMMFYYIAFHLYFYLVPYGFTSMATITWYAACLHAMVYCLRYHEVKAFQRGRVSFEQPRSLYSEIP 462
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7S0XCD7_9STRA (Hypothetical protein (Fragment) n=2 Tax=Chromulina nebulosa TaxID=96789 RepID=A0A7S0XCD7_9STRA) HSP 1 Score: 68.2 bits (165), Expect = 2.580e-11 Identity = 35/95 (36.84%), Postives = 59/95 (62.11%), Query Frame = 1
Query: 1 MWLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
+W++ ++ML EY+++I++RSRGSI+ F R + +++ +HIY Y G+ LA F M I+ ++ ELPA+ SG +S D PR + +P
Sbjct: 255 LWIFAIMMLLEYYSMIYLRSRGSIILFPRVILSTYMIYHIYVYLHPNGFHLLALLVMFMFMAWNMIFCVRKFELPAYSSGHVSIDAPRVLHNRVP 349
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7S1UFL8_9STRA (Hypothetical protein n=2 Tax=Phaeomonas parva TaxID=124430 RepID=A0A7S1UFL8_9STRA) HSP 1 Score: 67.8 bits (164), Expect = 3.440e-11 Identity = 35/95 (36.84%), Postives = 57/95 (60.00%), Query Frame = 1
Query: 1 MWLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
+WL+ ++M+ EY++++F+RS+ +I F R MLS L +H+Y Y F G++ + V +Y LE A +SGE+S +QPR +V LP
Sbjct: 256 LWLFALIMVLEYYSMVFLRSKAAIGFAPRMLMLSLLCYHLYIYSFPFGFYRPVLLLLTSVCVNVCLYCCVHLERQAVISGEVSFEQPRGAFVRLP 350
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A7R9YBE7_9STRA (Hypothetical protein (Fragment) n=1 Tax=Pinguiococcus pyrenoidosus TaxID=172671 RepID=A0A7R9YBE7_9STRA) HSP 1 Score: 60.8 bits (146), Expect = 9.650e-10 Identity = 33/95 (34.74%), Postives = 51/95 (53.68%), Query Frame = 1
Query: 1 MWLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFELAACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPRAHYVELP 285
+WL+ +VM+ EY++++F+RS+ +I F R M L +H+Y Y F AG+F LE A +SGE+S +QPR + LP
Sbjct: 24 LWLFALVMVLEYYSMVFLRSKAAIGFTPRMLMGCLLCYHLYIYSFPAGFFXXXXXXXXXXXXXXXXXSCFRLEKAALLSGEVSFEQPRGAFFRLP 118
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Match: A0A482SMB9_9ARCH (Uncharacterized protein n=1 Tax=archaeon TaxID=1906665 RepID=A0A482SMB9_9ARCH) HSP 1 Score: 61.2 bits (147), Expect = 1.170e-9 Identity = 34/89 (38.20%), Postives = 55/89 (61.80%), Query Frame = 1
Query: 1 MWLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFEL-AACSCFAGMFAVEIYVLQSLELPAFMSGEISHDQPR 264
++LY ++MLWEYF++I++RS SI F R + FL FH+Y+Y + G+ L AC A + + + ++ E AF G++S +QPR
Sbjct: 71 LYLYAIMMLWEYFSMIYMRSVSSIRLFPRITLAFFLVFHVYYYSYPMGFHMLFLACIALASVVCM-VQCIRVFETRAFRLGKVSIEQPR 158 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig31013.8387.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 10
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig31013.8387.1 >prot_H-paniculata_contig31013.8387.1 ID=prot_H-paniculata_contig31013.8387.1|Name=mRNA_H-paniculata_contig31013.8387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=95bp MWLYGMVMLWEYFALIFVRSRGSIVFFSRAAMLSFLAFHIYFYHFQAGYFback to top mRNA from alignment at H-paniculata_contig31013:466..750+ Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig31013.8387.1 ID=mRNA_H-paniculata_contig31013.8387.1|Name=mRNA_H-paniculata_contig31013.8387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=285bp|location=Sequence derived from alignment at H-paniculata_contig31013:466..750+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig31013:466..750+ >mRNA_H-paniculata_contig31013.8387.1 ID=mRNA_H-paniculata_contig31013.8387.1|Name=mRNA_H-paniculata_contig31013.8387.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=570bp|location=Sequence derived from alignment at H-paniculata_contig31013:466..750+ (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |