mRNA_H-paniculata_contig310.8384.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig310.8384.1
Unique NamemRNA_H-paniculata_contig310.8384.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: A0A6H5JFU8_9PHAE (Molybdopterin synthase catalytic subunit n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JFU8_9PHAE)

HSP 1 Score: 248 bits (632), Expect = 1.430e-75
Identity = 124/168 (73.81%), Postives = 139/168 (82.74%), Query Frame = 1 
Query:  115 KDYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKWEVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWN-GSGCCRKMVPVESSNGLQVESERNGE 615
            +D+VSV+   L L  +   V+DP AGA STFSGTTRDNH GKKVVRLEYEGYVPMAELELKKIC+Q+RD+W V+ IA+ HRLGVTEV EASVIIA+SSVHRKDSLEAVE+AINTLKATVPIWKLEVYEGD+RVWKENAEW  G GCCRKMVPVE   G   +    G+
Sbjct:   12 EDHVSVTHSCLQLGEIVEAVADPRAGAISTFSGTTRDNHYGKKVVRLEYEGYVPMAELELKKICAQVRDRWNVLKIALVHRLGVTEVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEWGPGGGCCRKMVPVEGEGGHDQQQVEGGD 179
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: A0A836CN85_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A836CN85_9STRA)

HSP 1 Score: 219 bits (557), Expect = 1.860e-64
Identity = 107/157 (68.15%), Postives = 124/157 (78.98%), Query Frame = 1 
Query:  109 SGKDYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKWEVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNGSGCCRKMVPVESS 579
            S  D V V+ + L L+ +   V+ P  GA STF G TRD HNGK VVRLEYEGY PMAE EL+KIC Q R KW +  IAIAHRLGVT VEEASVIIA+SSVHR++SLEAV+Y I+TLKATVPIW LEVYEGD+RVWKENAEW+G GCCR+MVP  ++
Sbjct:   21 SPHDLVMVTDQPLELSAMVAAVAGPKCGAISTFLGVTRDTHNGKTVVRLEYEGYAPMAEKELRKICEQARQKWSIEKIAIAHRLGVTAVEEASVIIAVSSVHRRESLEAVQYCIDTLKATVPIWYLEVYEGDSRVWKENAEWSGGGCCRQMVPTNTT 177
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: A0A8K1CIT3_PYTOL (Uncharacterized protein n=1 Tax=Pythium oligandrum TaxID=41045 RepID=A0A8K1CIT3_PYTOL)

HSP 1 Score: 193 bits (490), Expect = 4.890e-55
Identity = 101/164 (61.59%), Postives = 121/164 (73.78%), Query Frame = 1 
Query:  109 SGKDYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNG-----SGCC---RKMVPVE 573
            S  DYV ++ + L        V+   AGA STF GTTRDN NGKKVVRLEYEGY+PMAE EL+KIC+QIR+KW  V+ IA+ HRLGV EV++ASVIIA+SS HR++++EA EYAI+TLKATVPIWK E YEGD R+WKENAEW       + CC   R MVP E
Sbjct:   25 SAMDYVEITHDTLDHQCAVERVTHASAGAVSTFIGTTRDNFNGKKVVRLEYEGYIPMAEAELRKICTQIREKWPSVVGIALFHRLGVVEVKQASVIIAVSSPHRREAIEACEYAIDTLKATVPIWKSEQYEGDARMWKENAEWQSGAAARTSCCAPKRVMVPAE 188
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: A0A3F2RWH3_9STRA (Molybdopterin synthase catalytic subunit n=3 Tax=Phytophthora kernoviae TaxID=325452 RepID=A0A3F2RWH3_9STRA)

HSP 1 Score: 187 bits (476), Expect = 4.260e-53
Identity = 99/163 (60.74%), Postives = 117/163 (71.78%), Query Frame = 1 
Query:  118 DYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNG-----SGCC---RKMVPVESS 579
            D+V V  E+L   R   +V+ P AGA STF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  IR KW EV+ +A+ HRLGV EV EASV++A+SS HR+++LEA  +AI+TLKATVPIWK E YEGD R+WKEN EW       S CC   R MVPVE +
Sbjct:   19 DFVEVGYESLNNQRAVELVTHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICVTIRAKWPEVVGVALFHRLGVVEVAEASVVVAVSSPHRREALEACAFAIDTLKATVPIWKNEQYEGDERMWKENVEWKDGAAARSSCCGSKRAMVPVEET 181
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: A0A2P4Y8P9_9STRA (Molybdopterin synthase catalytic subunit n=1 Tax=Phytophthora palmivora var. palmivora TaxID=611791 RepID=A0A2P4Y8P9_9STRA)

HSP 1 Score: 186 bits (473), Expect = 1.130e-52
Identity = 103/176 (58.52%), Postives = 122/176 (69.32%), Query Frame = 1 
Query:   73 YTNEYPNMGECISGKDYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNG-----SGCC---RKMVPVE 573
            +++E P  G      D+V V  E L   R  G+V+ P AGA STF GTTRDN  GKKVVRLEYEGY PMA  EL KIC  IR+KW EV+ IA+ HRLGV EV EASVI+A+SS HR+++LEA  +AI+TLKATVPIWK E Y+GD R+WKEN EW       + CC   R MVPVE
Sbjct:    9 HSSEEPGRG------DFVEVGYEPLDNQRAVGLVTHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELCKICVLIREKWPEVVGIALFHRLGVVEVAEASVIMAVSSPHRREALEACAFAIDTLKATVPIWKSEQYQGDTRMWKENVEWKDGAAARASCCGSKRVMVPVE 178
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: D8LKV7_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LKV7_ECTSI)

HSP 1 Score: 184 bits (466), Expect = 1.310e-52
Identity = 87/100 (87.00%), Postives = 97/100 (97.00%), Query Frame = 1 
Query:  235 GKKVVRLEYEGYVPMAELELKKICSQIRDKWEVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEW 534
            GKKVVRLEYEGYVPMAELELKKIC+Q+RD+W+++ IA+ HRLGVTEV EASVIIA+SSVHRKDSLEAVE+AINTLKATVPIWKLEVYEGD+RVWKENAEW
Sbjct:    7 GKKVVRLEYEGYVPMAELELKKICAQVRDRWDILKIALVHRLGVTEVGEASVIIAVSSVHRKDSLEAVEFAINTLKATVPIWKLEVYEGDSRVWKENAEW 106
[Close]
BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: M4BDH5_HYAAE (Molybdopterin synthase catalytic subunit n=1 Tax=Hyaloperonospora arabidopsidis (strain Emoy2) TaxID=559515 RepID=M4BDH5_HYAAE)

HSP 1 Score: 186 bits (472), Expect = 1.400e-52
Identity = 97/163 (59.51%), Postives = 116/163 (71.17%), Query Frame = 1 
Query:  118 DYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNG-----SGCCRK---MVPVESS 579
            D V V  E L   R+  +V+D  AGA STF GTTRDN  GKKVVRL+YEGY PMA  EL+KICS IRDKW +V+ +A+ HRLGV  V EASVI+A+SS HR+++LEA  +AI+ LKATVPIWK E YEGD R+WKEN EW G     + CC K   MVP E +
Sbjct:   14 DVVEVGYEPLDSQRIVDLVTDARAGAISTFVGTTRDNFQGKKVVRLKYEGYAPMAVSELRKICSAIRDKWPDVVRVALCHRLGVVNVTEASVIVAVSSPHRREALEACAFAIDRLKATVPIWKCEHYEGDERMWKENLEWKGGAAVRASCCSKKRAMVPAEKT 176
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: A0A0W8DHZ7_PHYNI (Molybdopterin synthase catalytic subunit n=6 Tax=Phytophthora TaxID=4783 RepID=A0A0W8DHZ7_PHYNI)

HSP 1 Score: 191 bits (486), Expect = 2.200e-52
Identity = 102/168 (60.71%), Postives = 122/168 (72.62%), Query Frame = 1 
Query:  118 DYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEW-NG----SGCC---RKMVPVESSNGLQV 594
            D+V V  E+L   R   +V+ P AGA STF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  +R+KW +V+ +A+ HRLGV EV EASV++A+SS HR+++LEA  +AI+TLKATVPIWK E YEGD R WKEN EW NG    S CC   R MVPVE + GL V
Sbjct:   19 DFVEVGYESLDNQRAVALVTHPSAGAISTFVGTTRDNFRGKKVVRLEYEGYTPMAVSELRKICVIVREKWPDVVGVALFHRLGVVEVAEASVVVAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDTRTWKENVEWKNGAAARSSCCGSKRVMVPVEPNKGLIV 186
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BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: V9FG54_PHYPR (Molybdopterin synthase catalytic subunit n=6 Tax=Phytophthora parasitica TaxID=4792 RepID=V9FG54_PHYPR)

HSP 1 Score: 186 bits (471), Expect = 2.300e-52
Identity = 98/161 (60.87%), Postives = 117/161 (72.67%), Query Frame = 1 
Query:  118 DYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEW-NG----SGCC---RKMVPVE 573
            D+V V  E+L   R   +V+ P AG  STF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  +R+KW +V+ +A+ HRLGV EV EASV++A+SS HR+++LEA  +AI+TLKATVPIWK E YEGD R WKEN EW NG    S CC   R MVPVE
Sbjct:   19 DFVEVGYESLDNQRAVALVTHPSAGTISTFVGTTRDNFRGKKVVRLEYEGYTPMAVSELRKICVIVREKWPDVVGVALFHRLGVVEVAEASVVVAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDTRTWKENVEWKNGAAARSSCCGSKRVMVPVE 179
[Close]
BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Match: G4YUD6_PHYSP (Molybdopterin synthase catalytic subunit n=3 Tax=Phytophthora TaxID=4783 RepID=G4YUD6_PHYSP)

HSP 1 Score: 185 bits (470), Expect = 3.210e-52
Identity = 102/176 (57.95%), Postives = 120/176 (68.18%), Query Frame = 1 
Query:   73 YTNEYPNMGECISGKDYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKKVVRLEYEGYVPMAELELKKICSQIRDKW-EVIHIAIAHRLGVTEVEEASVIIAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNG-----SGCC---RKMVPVE 573
            +++E P  G      D+V V    L   R   +V  P AGA STF GTTRDN  GKKVVRLEYEGY PMA  EL+KIC  IR+KW EV+ +A+ HRLGV EV EASVI+A+SS HR+++LEA  +AI+TLKATVPIWK E YEGD RVWKEN EW       S CC   R MVPV+
Sbjct:   10 HSSEEPGRG------DFVEVGYAPLDNQRAVELVMHPSAGAISTFVGTTRDNFQGKKVVRLEYEGYTPMAVSELRKICVTIREKWPEVVGVALFHRLGVVEVAEASVIVAVSSPHRREALEACAFAIDTLKATVPIWKSEQYEGDTRVWKENVEWKDGAAARSSCCGSKRVMVPVD 179
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig310.8384.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
A0A6H5JFU8_9PHAE1.430e-7573.81Molybdopterin synthase catalytic subunit n=1 Tax=E... [more]
A0A836CN85_9STRA1.860e-6468.15Molybdopterin synthase catalytic subunit n=1 Tax=T... [more]
A0A8K1CIT3_PYTOL4.890e-5561.59Uncharacterized protein n=1 Tax=Pythium oligandrum... [more]
A0A3F2RWH3_9STRA4.260e-5360.74Molybdopterin synthase catalytic subunit n=3 Tax=P... [more]
A0A2P4Y8P9_9STRA1.130e-5258.52Molybdopterin synthase catalytic subunit n=1 Tax=P... [more]
D8LKV7_ECTSI1.310e-5287.00Uncharacterized protein n=1 Tax=Ectocarpus silicul... [more]
M4BDH5_HYAAE1.400e-5259.51Molybdopterin synthase catalytic subunit n=1 Tax=H... [more]
A0A0W8DHZ7_PHYNI2.200e-5260.71Molybdopterin synthase catalytic subunit n=6 Tax=P... [more]
V9FG54_PHYPR2.300e-5260.87Molybdopterin synthase catalytic subunit n=6 Tax=P... [more]
G4YUD6_PHYSP3.210e-5257.95Molybdopterin synthase catalytic subunit n=3 Tax=P... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig310contigH-paniculata_contig310:36212..40733 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score185.3
Seed ortholog evalue3.1e-44
Seed eggNOG ortholog272952.HpaP804342
Preferred nameMOCS2
KEGG rclassRC02507
KEGG koko:K03635,ko:K21232
KEGG ReactionR09395
KEGG Pathwayko00790,ko01100,ko04122,map00790,map01100,map04122
Hectar predicted targeting categoryother localisation
GOsGO:0000123,GO:0003674,GO:0003824,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005634,GO:0005654,GO:0005671,GO:0005694,GO:0005700,GO:0005737,GO:0005829,GO:0006139,GO:0006163,GO:0006325,GO:0006338,GO:0006464,GO:0006473,GO:0006475,GO:0006725,GO:0006732,GO:0006753,GO:0006777,GO:0006793,GO:0006796,GO:0006807,GO:0006996,GO:0008150,GO:0008152,GO:0009058,GO:0009108,GO:0009116,GO:0009117,GO:0009119,GO:0009141,GO:0009144,GO:0009150,GO:0009199,GO:0009205,GO:0009259,GO:0009987,GO:0016043,GO:0016569,GO:0016570,GO:0016573,GO:0016604,GO:0016607,GO:0016740,GO:0016782,GO:0016783,GO:0018130,GO:0018193,GO:0018205,GO:0018393,GO:0018394,GO:0019008,GO:0019538,GO:0019637,GO:0019693,GO:0019720,GO:0030366,GO:0031248,GO:0031974,GO:0031981,GO:0032324,GO:0032991,GO:0034641,GO:0036211,GO:0042278,GO:0042802,GO:0043170,GO:0043226,GO:0043227,GO:0043228,GO:0043229,GO:0043231,GO:0043232,GO:0043233,GO:0043412,GO:0043543,GO:0043545,GO:0044237,GO:0044238,GO:0044249,GO:0044260,GO:0044267,GO:0044281,GO:0044422,GO:0044424,GO:0044428,GO:0044444,GO:0044446,GO:0044451,GO:0044464,GO:0046039,GO:0046128,GO:0046483,GO:0051186,GO:0051188,GO:0051189,GO:0051276,GO:0055086,GO:0070013,GO:0071704,GO:0071840,GO:0072521,GO:0090407,GO:1901068,GO:1901135,GO:1901360,GO:1901362,GO:1901564,GO:1901566,GO:1901576,GO:1901657,GO:1902493,GO:1902494,GO:1902562,GO:1990234
EggNOG free text desc.Catalytic subunit of the molybdopterin synthase complex, a complex that catalyzes the conversion of precursor Z into molybdopterin. Acts by mediating the incorporation of 2 sulfur atoms from thiocarboxylated MOCS2A into precursor Z to generate a dithiolene group
EggNOG OGs3Q86W@4776,COG0314@1,KOG3307@2759
Ec32 ortholog descriptionmolybdopterin synthase
Ec32 orthologEc-11_005720.1
EC2.8.1.12
COG Functional cat.H
Best tax levelPeronosporales
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons4
Model size1659
Cds size657
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig310.8384.1prot_H-paniculata_contig310.8384.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig310 36305..39824 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929953.586929-UTR-H-paniculata_contig310:36211..363041622929953.586929-UTR-H-paniculata_contig310:36211..36304Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig310 36212..36304 +
1691481084.6055157-UTR-H-paniculata_contig310:36211..363041691481084.6055157-UTR-H-paniculata_contig310:36211..36304Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig310 36212..36304 +
1622929953.6410875-UTR-H-paniculata_contig310:39824..407331622929953.6410875-UTR-H-paniculata_contig310:39824..40733Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig310 39825..40733 +
1691481084.6494942-UTR-H-paniculata_contig310:39824..407331691481084.6494942-UTR-H-paniculata_contig310:39824..40733Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig310 39825..40733 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929953.5964622-CDS-H-paniculata_contig310:36304..364461622929953.5964622-CDS-H-paniculata_contig310:36304..36446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 36305..36446 +
1691481084.6170523-CDS-H-paniculata_contig310:36304..364461691481084.6170523-CDS-H-paniculata_contig310:36304..36446Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 36305..36446 +
1622929953.6086-CDS-H-paniculata_contig310:37399..374761622929953.6086-CDS-H-paniculata_contig310:37399..37476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 37400..37476 +
1691481084.6251812-CDS-H-paniculata_contig310:37399..374761691481084.6251812-CDS-H-paniculata_contig310:37399..37476Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 37400..37476 +
1622929953.6189752-CDS-H-paniculata_contig310:38697..388711622929953.6189752-CDS-H-paniculata_contig310:38697..38871Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 38698..38871 +
1691481084.6335135-CDS-H-paniculata_contig310:38697..388711691481084.6335135-CDS-H-paniculata_contig310:38697..38871Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 38698..38871 +
1622929953.6317065-CDS-H-paniculata_contig310:39560..398241622929953.6317065-CDS-H-paniculata_contig310:39560..39824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 39561..39824 +
1691481084.6413662-CDS-H-paniculata_contig310:39560..398241691481084.6413662-CDS-H-paniculata_contig310:39560..39824Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig310 39561..39824 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig310.8384.1

>prot_H-paniculata_contig310.8384.1 ID=prot_H-paniculata_contig310.8384.1|Name=mRNA_H-paniculata_contig310.8384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=219bp
MGECISGKDYVSVSAEALGLTRLAGMVSDPCAGATSTFSGTTRDNHNGKK
VVRLEYEGYVPMAELELKKICSQIRDKWEVIHIAIAHRLGVTEVEEASVI
IAISSVHRKDSLEAVEYAINTLKATVPIWKLEVYEGDNRVWKENAEWNGS
GCCRKMVPVESSNGLQVESERNGEGVLLTSSREKSADTDVLEPASASPAE
SGKQHVHVHAHGDGYCRR*
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mRNA from alignment at H-paniculata_contig310:36212..40733+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig310.8384.1 ID=mRNA_H-paniculata_contig310.8384.1|Name=mRNA_H-paniculata_contig310.8384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=4522bp|location=Sequence derived from alignment at H-paniculata_contig310:36212..40733+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
TGCTCAAGTTCAAAAAGTGCAGGAGAGTAACACGTTGAAGACACTGACCG
AACGCACAATCTGTACAACATATACACAAACGAATACCCCAATATGGGTG
AATGTATATCCGGAAAGGACTATGTTTCCGTGTCCGCCGAGGCTCTCGGT
TTGACAAGGTTAGCAGGGATGGTATCCGATCCGTGCGCTGGAGCTACATC
AACTTTCTCGGGGACCACGAGAGACAATCATAATGGTGAGAGGTGAGAGA
GGAGAGGGGTAACCCTACCCTACCCTTGCCCCCGCCTCTGTCCTGTTTAC
CATTCCATTTCACTGAATACTATTTGAAGTCCATAGATGCATCAGCAGTC
TGGACATGTTCTGGGTGGCATATTCCCTCTGGTACGAAATAAGAACTGAA
ACTTCACCCAAAGTGAGGGGTGACTTCGTGAATTTCACATTACGGTGTAT
ACCACCCCCCTCCCCTCACTTTGATGATGCGTTTGTCCAAACCCGATGTT
CCTTCAGGATGATTATCTTGTAGTATTGAAAACGCTCGTCCGTCGCGCAA
ATCTTGACGAGGGCAAAAACATGCCAATTCGTGTATGTGCTGTCTTTACT
GAGGTGTTTATCTGTGTACTGACGTGTCTATCTGAACAGGGGCAGCTTCC
TATGCCTCTAGTCATGTCATATGCGTATTTTTTCCCCGTCTTTCAGCAGG
AGATTAAATGGGGATTATATAGGGTACGAGAGTGCAAGTGTTAAGAGTTA
ATTTACGATGAGATAGATATCCCTGTCGCATGTTGATGCAGCATACACGC
TCTCTGTCTCTATCCTTCAAATTTACTTATACTACTTGTTTAGGTACGTA
CAAACAGGGTTGGTTTACACAGTTTCTACACTAATATACAATATAGTACA
CCGAATTTACCGGCTTGTGCAACCGTACGTCCTCGTTCACTTTCCCGTCC
TCATTGTCTTGTTTCCCCACGGCACTGTCGGATGTTGCCAACTAGGTATT
TAACGACCAACACTCGATTATAGACGTTACCCCTTGCCGCTAATTCTACC
CCCACCCCGTTACCCAAATTGTTGGAGAAGCCCTCGAGGTGATACATCAA
TTTTCACCAAGAACGCCTATACATGAAGTGACAACACCGCTTTTTCGCCA
TGTTGTTGGCGTGACCCTGCTGCCTGGTTTTGTGCCAGGAAAGAAAGTGG
TACGTCTGGAGTATGAGGGCTATGTGCCCATGGCCGAGCTCGAACTGAAG
AAAATATGTAGTCAGGTGAGACCGCAGATTTGTCATGTCGTAATGATGTA
CTTTTTTTGTTGGGAGCCAGTATGTCGCCCGTCCATGAATCAAGTGGAGC
TGCCTTGGAACTGTTGCACCCCCGGACAAATACGAATGCAGCATTCGCAA
CAATCTCGCAATATCGTTATTTGTCTTGGGTAAACGCGAATTTATTCGTT
TACAAGTCTATGAATGGCCACTCTACAGATGGTAACCAAGTGGTTGTATA
CCCGGCGAACAGTTCCACATGTAGGTCCTGTTTATTTCGCGGATGGTACT
GTACAGATTGAACACCCTATTTGCCCGAGCTTTTCGGTGCTCCATGGTAG
ATTGAGTACACTGCATATTATTCACGTCATATGGACATCTTCCCCAACTC
AAGCACATATAGTATTCCTTCCGGATTTCTCGTATTTATTCTTGTCTTGT
ATTCGTGTTTGTCGGGAGGGTACACTGTTGTTGTGGCCGGCGCAATTGTC
GACGAAAATCCGAGAGCATTAAGTACTACTAACCCCGTTATCACCCCCCC
ATGTTATCGCACCTAGTGCTGTAACGAAGGGGAGTGTGGGTGAGAACGCG
GGTAAAGGTGTTCAAGGACATCCGATTGGGATTCTTTTTCTGGCGCGTGC
GCTTTCTTTGGAGAATAGTTTAGGGGTGTATCGATGCGAAGAACCAAATT
GAAGGGAGTATGTACATATTATTTTTCTTTGACGAACTTACTGTTCGTGG
GCGACCCCTAGCAGCAAGTATGCGTGTAGCCTTTTCGCGCTCTGCTACGA
AATTAGTTATTCCCTTTTGTAACCCCCCCCCCTCCCCCGTGGTGTCGTAC
GGTGCGATTTTTGATGCACAAAGATATTTTCGCTTCCCAACTGATACTGT
GTGTTGCTGACAACCTCTTCGTTCGAAGTGCCCCAACTTTTCGATATCCC
GCTGTTTTTGGTACCTGGCCACCTGTGTATTTTTTTGTTTCTGTCAGTGT
TCATCCGTCTCGGGTTTTAGTGGTTTTTTTCTCGTGTGATGCACTGTAAG
AAGCACAGTGCTCCCAAGCAAAAATGACTCCCTCCGGAGGCAACGTGTTG
AATCTATTTGCTGGGTCTAGTTTGAAAAATGTAGTGTTGGAGTATGGACG
AAGATGAACGTCACCCCCATAACGGATCTATACATGACCAAAAATAGTGT
CATGACTGCCGTTCTTATGTTTTTGTTCATTTATAGATCCGAGATAAGTG
GGAAGTGATTCATATCGCCATCGCGCACCGGCTGGGGGTGACGGAAGTTG
AGGAAGCAAGCGTGATCATCGCGATATCTTCGGTGCACCGCAAGGACTCA
CTGGAGGCCGTGGAGTATGCCATCAACACCCTCAAGGCGACGGTTCCCAT
ATGGAAACTGGTGAGCATCGAGTAGTAGTGAATGCACTGCACAGTGTAAA
AAGACGTATGGTTGTGCGTTCGTCGCCAAAATTGTGCTTGCTCCGACTGG
CTGATTGTTTTCCTTGAATATCACCTCTAGTGCTATACCAGCAGCTTATT
ATGCGGATACAGCAGTTTCTCTCTTGAAATGCTATACATTCGCGACTCCT
TAGCTGGCTTCGAACCTTGCGAGCTTGTGGGTTACCGGTGGGACTACGTA
TTTAATTGTGTGTTTACGTGAGACACCGGCCCCGTGCGATATTCTGACAT
TCTGATTACCTCTGGCGGCTCTCTCCGGCTCACGGTGCACTCCACGTTAG
CGCTGATCACCTTGTATTATACTCGGAGAATATGACGAGGTGTTTTGCTT
TCGCCATTTTTTCGCGTTGCCTTCCCCCGCTTATTCAACCTCATACATTC
TGACATACTTACTGTATACAGAAAGTTCCATTCGACGCGATATTCAATGT
AACCTTTTGGCTGCTTTGGATAAGTATGGTGTCAAACCGATGCATGCCTC
CACGAGGTTCCACCGTAAGGGCCGACCGACCCTATGACTGTCAAAGACCT
TCGTCCCGAAGGCTTGTACACCATGAAACACTACGAATTGGTACTCCATA
AAACCTTTTTCTAACCGCAACTGTATTCGATCGAACCCCGGAGAAACAGG
AGGTCTATGAGGGCGATAACAGGGTTTGGAAGGAAAACGCTGAATGGAAC
GGAAGCGGTTGCTGCCGAAAGATGGTCCCAGTGGAGAGCAGCAATGGTCT
TCAGGTGGAGAGCGAGAGGAACGGCGAAGGGGTTTTGCTGACGAGCAGTA
GAGAAAAGTCGGCCGACACCGATGTGTTGGAGCCTGCGTCGGCGTCGCCA
GCGGAGAGCGGCAAGCAGCATGTGCATGTCCACGCTCACGGGGACGGTTA
CTGTAGACGGTAACTCGTAAAATAAATACTTTGTCGATCCATGGTCTCTT
ACTTTGGGTTGCGTTTTTACAATCCCTCCGCCCCCGTGCCCCTCCTCTTG
ATCTGGTTGGTTTGTGCATTTAGTCACTCAGCAGTATTCAATCGACTGAG
CATACTTCCAACTCTTCATTAATCTTTATTGATAACATTTACCTTATTTC
TCTACTAGCTTATCTTACTCGCCGTCATGTAGATATGACGCGTAGCGTTG
GGTGAGTTATCAGCACGACCATATCCTACCGTTGCGTACTAAATAGTACT
ATGATTCGAGTGTGTCGACATTTTTAAGGTTTGTGTACGCCCTTCTTCAC
AGTTCGCGTAATTCGTAAGGTAGGCTTTTAGATACTGGTGATTGGTAGGC
TGGTGTGTTGATGCACTCCCGTTAATGTGCGAATGACTGCTAGTTGCCTA
ATCCCTATGTTTTATTACACTGAAGGGTGGTGTTAGTGGTGGTGGTCGCT
TCGAAATCGTTTTTCAACTCTAGACTTGAGAAGGAACTTCTGAATATATT
TTATCGGGGACGTTGTACCTATATGCGTACATCAAAGTTGCGACTAGGTG
AAAACGAAGGCAAGTATAGAGCACGGGAGTAGGCATGCCTGTATTTCTAG
CATGGATAAACGTAAGGCTGCATTGCTGCTGGCGCATTCCGCCGCGCGCC
TATAGGGAAGATTTACATCTGTAGACACAAGTGAACGGGAAACGCGTCGT
TTTATGGGCTTGCACGCTTGTCATGATCGGGCGTCTCCATCGCACTGAGA
AAAATCTACTATTTTGCCGTCACCGTAAATTCAGCACGTGGCATACTGCC
TTGTGCACACGAGGACACGAACGAGCGTGACTTGCCGAGGCTGGGGCGTT
CGAGAGCAGTCGATGTTTTCCC
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Coding sequence (CDS) from alignment at H-paniculata_contig310:36212..40733+

>mRNA_H-paniculata_contig310.8384.1 ID=mRNA_H-paniculata_contig310.8384.1|Name=mRNA_H-paniculata_contig310.8384.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1314bp|location=Sequence derived from alignment at H-paniculata_contig310:36212..40733+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGGTGAATGTATATCCGGAAAGGACTATGTTTCCGTGTCCGCCGAGGC
TCTCGGTTTGACAAGGTTAGCAGGGATGGTATCCGATCCGTGCGCTGGAG
CTACATCAACTTTCTCGGGGACCACGAGAGACAATCATAATGATGGGTGA
ATGTATATCCGGAAAGGACTATGTTTCCGTGTCCGCCGAGGCTCTCGGTT
TGACAAGGTTAGCAGGGATGGTATCCGATCCGTGCGCTGGAGCTACATCA
ACTTTCTCGGGGACCACGAGAGACAATCATAATGGAAAGAAAGTGGTACG
TCTGGAGTATGAGGGCTATGTGCCCATGGCCGAGCTCGAACTGAAGAAAA
TATGTAGTCAGGAAAGAAAGTGGTACGTCTGGAGTATGAGGGCTATGTGC
CCATGGCCGAGCTCGAACTGAAGAAAATATGTAGTCAGATCCGAGATAAG
TGGGAAGTGATTCATATCGCCATCGCGCACCGGCTGGGGGTGACGGAAGT
TGAGGAAGCAAGCGTGATCATCGCGATATCTTCGGTGCACCGCAAGGACT
CACTGGAGGCCGTGGAGTATGCCATCAACACCCTCAAGGCGACGGTTCCC
ATATGGAAACTGATCCGAGATAAGTGGGAAGTGATTCATATCGCCATCGC
GCACCGGCTGGGGGTGACGGAAGTTGAGGAAGCAAGCGTGATCATCGCGA
TATCTTCGGTGCACCGCAAGGACTCACTGGAGGCCGTGGAGTATGCCATC
AACACCCTCAAGGCGACGGTTCCCATATGGAAACTGGAGGTCTATGAGGG
CGATAACAGGGTTTGGAAGGAAAACGCTGAATGGAACGGAAGCGGTTGCT
GCCGAAAGATGGTCCCAGTGGAGAGCAGCAATGGTCTTCAGGTGGAGAGC
GAGAGGAACGGCGAAGGGGTTTTGCTGACGAGCAGTAGAGAAAAGTCGGC
CGACACCGATGTGTTGGAGCCTGCGTCGGCGTCGCCAGCGGAGAGCGGCA
AGCAGCATGTGCATGTCCACGCTCACGGGGACGGTTACTGTAGACGGTAA
GAGGTCTATGAGGGCGATAACAGGGTTTGGAAGGAAAACGCTGAATGGAA
CGGAAGCGGTTGCTGCCGAAAGATGGTCCCAGTGGAGAGCAGCAATGGTC
TTCAGGTGGAGAGCGAGAGGAACGGCGAAGGGGTTTTGCTGACGAGCAGT
AGAGAAAAGTCGGCCGACACCGATGTGTTGGAGCCTGCGTCGGCGTCGCC
AGCGGAGAGCGGCAAGCAGCATGTGCATGTCCACGCTCACGGGGACGGTT
ACTGTAGACGGTAA
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