mRNA_H-paniculata_contig3095.8371.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous

You are viewing an mRNA, more information available on the corresponding polypeptide page

Overview
NamemRNA_H-paniculata_contig3095.8371.1
Unique NamemRNA_H-paniculata_contig3095.8371.1
TypemRNA
OrganismHalopteris paniculata Hal_grac_a_UBK monoicous (Halopteris paniculata Hal_grac_a_UBK monoicous)
Homology
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: D7FMJ0_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FMJ0_ECTSI)

HSP 1 Score: 757 bits (1955), Expect = 2.180e-262
Identity = 412/662 (62.24%), Postives = 484/662 (73.11%), Query Frame = 2
Query:    2 GPRGRFDIDLYQCSDAFCGQSDCGEFVVNICDKPRIGCTASDGDYVMEVPTSLTPADGYKIRVGLHGTQLFDCTSTFSIIQDIPVSTLEVFAPALVSADDLQVGNGYGDDDSASVVLDTSSS--TGSQSLFRALRSSNSPS-FDAYSETGIEG-NDIIYVRWEYNDGMGGSFARFNIDLYYCGGGCERNENCGQAVARLCEGCPDSSGEERVPLPFPYSSHNYKIRVSTYKSVQRSVSACSPKFEITAREHPEYSTPTPVEPGLYIKRQPD--PRTRGTPDPVADLPSTPIVRPTNYPAWGPAHNPPAKGTCGNLGLPDIRYASTTKRVYVERNGTRGGCVTLSDIWELEKGALHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHD 1969
            G +GRFDI LY+C DAFCGQ DCG F+  ICD P  GC    G Y M VP  L   +GYKIRVGLH + L+DC+STFSII+ IP+ ++EV+ P +V   +  +    GDDD AS+ ++ S S   G + L  +  +S+ P  +D  +  G    ND I   W ++DG+G +FARFNIDLYYCGGGC   E+CG+ VARLCE CPDS G E V LP  YSSHNYKIRVST   ++R  S+CSPKFEI  ++ P YSTP+P    LY        PR   T  PV DLPS P+V PT +P WG  +  P +  C ++ +P +RYASTT R+YVE+   RGGC TL++IWE     L+P+ P TN+R    TGVWLLTEELYV+DGV LQVHGT RGGDCDELRLLSDE TFINLRAHGG  SFLGTKV+SW+EGKGTVDT+HEDGRSY+SAVSEV YDP+QTC+G AK + GE+RMDVIDSEI +LG++ESESYGL WKVRGFC+DKSNL+VFD VNVYGD+INS+IH NYFG YSYGHQ GNWSYNKMH+NVEYGFDPHDDSDYL I GNDVW                XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      G+AVLESFY+NV NNVF  NRYGIRFSVG+GYNW+ D
Sbjct:   42 GSQGRFDIALYECGDAFCGQQDCGTFLQEICDMPGAGCMDGSGTYRMTVPAELPAGNGYKIRVGLHDSSLYDCSSTFSIIRTIPIPSMEVYVPTVVDGGEGNLDGYGGDDDDASLTVEESLSYTAGRRGLASSSSTSSDPQLYDEGTTAGFAAANDTIMASWSFDDGLGRTFARFNIDLYYCGGGCSITEDCGEIVARLCEACPDSDGSEMVTLPNVYSSHNYKIRVSTSSRIRRPGSSCSPKFEIRGKDRPLYSTPSPTV--LYDSSDVSLYPRPPVTAPPVEDLPSEPVVLPTIWPDWGEENYAPEQPGCDSIDVPQVRYASTTARIYVEQATNRGGCFTLTEIWESGSRPLYPLEPATNERVDYVTGVWLLTEELYVTDGVILQVHGTDRGGDCDELRLLSDETTFINLRAHGGSFSFLGTKVVSWNEGKGTVDTNHEDGRSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCIDKSNLDVFDFVNVYGDMINSNIHDNYFGHYSYGHQGGNWSYNKMHENVEYGFDPHDDSDYLHIVGNDVWEXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXHDNGDAGMAVLESFYMNVNNNVFIKNRYGIRFSVGSGYNWMWD 701          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: A0A6H5KSU6_9PHAE (MEP3 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KSU6_9PHAE)

HSP 1 Score: 541 bits (1393), Expect = 2.580e-181
Identity = 308/519 (59.34%), Postives = 359/519 (69.17%), Query Frame = 2
Query:  470 RWEYNDGMGGSFARFNIDLYYCGGGCERNENCGQAVARLCEGCPDSSGEERVPLPFPYSSHNYKIRVSTYKSVQRSVSACSPKFEITAREHPEYSTPTPVEPGLYIKRQPD--PRTRGTPDPVADLPSTPIVRPTNYPAWGPAHNPPAKGTCGNLGLPDIRYASTTKRVYVERNGTRGGCVTLSDIWELEKGALHPINPRTNKRAR-------AP-------------TGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNW 1960
            RW ++DG+G +FARFNIDLYYCGGGC    +CG+ VARLCE CPDS G E V LP  YSSHNYKIRVST  S++R  S+CSPKFEI  ++ P YSTP+P    LY        PR   T  PV DLPS P+V PT +P WG  +  P +  C ++ +P++RYASTT R+Y+E+   RGGC TL++IWE     L+P++P TN+R         +P             TGVWLLTEELYV+DGV LQVHGT RGGDCDELRLLS+E TFINLRAHGG  SFLGTKV+SW+EGK TVDT+HEDGRSY+SAVSEV YDP+QTC+G AK + GE+RMDVIDSEI +LG++ESESYGL WKVRGFCVDKSN +VFD VNVYGD+INS+IHH                                              N NHGIIASKRCDHV     XXXXXXXXXXXXXXXXXXXXXXXXXX      G+AVLESFY++V NNVF NNRYGIRFSVG+GYNW
Sbjct:    8 RWSFDDGLGRTFARFNIDLYYCGGGCSITGDCGEMVARLCEACPDSDGSEMVTLPNVYSSHNYKIRVSTSSSIRRHGSSCSPKFEIRGKDRPLYSTPSPT--ALYDSSDVSLYPRPPVTAPPVEDLPSEPVVLPTIWPDWGEENYAPEQPGCDSVDVPEVRYASTTARIYLEQATNRGGCFTLTEIWESGSRPLYPLDPATNERESHSITAVLSPLALLYCRSGVDYVTGVWLLTEELYVTDGVILQVHGTDRGGDCDELRLLSNETTFINLRAHGGSFSFLGTKVVSWNEGKRTVDTNHEDGRSYISAVSEVIYDPNQTCNGTAKSEMGEARMDVIDSEIAFLGYYESESYGLTWKVRGFCVDKSNPDVFDFVNVYGDMINSNIHH----------------------------------------------NCNHGIIASKRCDHVRIIDNXXXXXXXXXXXXXXXXXXXXXXXXXXHDNGDAGMAVLESFYMDVNNNVFTNNRYGIRFSVGSGYNW 478          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: Q7XAJ7_9PHAE (Mannuronan C-5-epimerase n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ7_9PHAE)

HSP 1 Score: 436 bits (1121), Expect = 2.170e-140
Identity = 245/446 (54.93%), Postives = 309/446 (69.28%), Query Frame = 2
Query:  893 HNPPAKGTCGNLGLPDIRYASTTKRVYVER--NGTRGGCVTLSDIWELEKGA--LHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGASTVSFDGSSDTMYRDN 2212
            + P  K  C       IRY+S  +R+Y+E   + TRGGCVTL  IWE ++G   L+ ++ ++   + + TG WLLTEEL+V DG+TL+VHGT+ GGD DELRLLS  +TFINLRAHGG L FL TKV +WD      D   EDGRSYVSAVSEV  D SQTC+G AK + GE+RMD+ DSE+GYLG+H SESYGL WKVRGFCVDKSN ++F+ VNVYG+I +SDIHHN FG+Y+YGHQ G+W  NKMHDN  YGFDPHDDSD+L IH N+V+ NG HGIIASKRC+ V                     XXXXXXXXXXXXXXXX  GLA++ESF  +V +N+F+NN+YGIRFSVG+G N   +N++  STRY+ ++YLGSD PDV   SG    NVF  N I G   ++IKL  A+ +  ++N    A+T+ F+ +  T+   N
Sbjct:   28 NEPIPKPECDESIAVSIRYSSVYERLYLESADSKTRGGCVTLEQIWEHQRGEAPLYAVDSKSGDISDSATGTWLLTEELFVEDGITLKVHGTSAGGDADELRLLSTSDTFINLRAHGGSLDFLSTKVFAWDTSINGPDRDEEDGRSYVSAVSEVITDDSQTCNGRAKNNMGEARMDIEDSEMGYLGYHGSESYGLTWKVRGFCVDKSNHDLFEDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYDNGYHGIIASKRCNGVSIQGNEVYGGATSSAGIFLHRXXXXXXXXXXXXXXXXDAGLAMMESFNADVSDNIFENNKYGIRFSVGSGRNVFFNNVISGSTRYSTYSYLGSDAPDVVD-SGRSQDNVFQENNIIGG-VESIKLLDADGTQFIDNTFEDATTIRFNDAKKTLMSGN 471          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: D7FXE4_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE4_ECTSI)

HSP 1 Score: 431 bits (1107), Expect = 4.000e-138
Identity = 233/480 (48.54%), Postives = 297/480 (61.88%), Query Frame = 2
Query:  893 HNPPAKGTCGNLGLPDIRYASTTKRVYVER--NGTRGGCVTLSDIWELEKGA--LHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGAST----VSFDGSSDTMYRDNE--EETGMEGVAKGSACFS--DDSSLTPKC 2290
            ++P +K  C +     IRYA TTKR+Y+E     TRGGC TL  IWE   G   L+ ++P +   +   TG WLLTEELYV DG+TL+V+GT  GGD DELRLLS   T+INLRAHGG L F+GTKV SWD    + D    DGRSY+SAVSE+  D  +TC+GNAK   GE+RMD+ +SEIGYLGF +SESYGL WKVRGFC DKSN E+FD VNVYG++ +SDIHH  FG+Y+YGHQ G+W  NKMHDN  YGFDPHDDSD+L IH N+V+ NG HGIIASKRC+ V                                       GLA+LESF  +V  N F+NN+YG+R SVG   N   +NI+ ++++YN +TYLGSD PDV  +SG    NVF +N  SG   +TIK+K+A+ +  ++N           V FD + +++ + N   +E   E      +CF    DS   P C
Sbjct:   35 NDPISKPDCDSDIEVSIRYAGTTKRLYLESADGETRGGCATLGQIWESRAGKAPLYAVDPDSGDVSETETGTWLLTEELYVEDGITLKVYGTDEGGDADELRLLSTSETYINLRAHGGSLDFVGTKVFSWDTSTNSPDEDETDGRSYISAVSEIVTDEDETCEGNAKNTMGEARMDIENSEIGYLGFQDSESYGLTWKVRGFCKDKSNPEIFDDVNVYGNMYDSDIHHLRFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRMSVGCADNVFSENIISNNSKYNAYTYLGSDEPDVV-SSGRSQNNVFSQNSFSGAE-ETIKIKEADGTQFLDNVFEVGDADGLVVRFDDAMNSVMQGNTGLDEGDFELKVTNDSCFDGESDSGYEPVC 512          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: D7G339_ECTSI (Mannuronan C-5-epimerase n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7G339_ECTSI)

HSP 1 Score: 425 bits (1092), Expect = 5.960e-136
Identity = 229/465 (49.25%), Postives = 290/465 (62.37%), Query Frame = 2
Query:  941 IRYASTTKRVYVER--NGT-RGGCVTLSDIWELE--KGALHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGAST----VSFDGSSDTMYRDNE--EETGMEGVAKGSACFSD--DSSLTPKC 2290
            IRYA TT R+Y+E   NGT RGGCVTL  IWE    KG L+ ++P +   + + TG WLLTEELYV DG+TL+V+G+  GGD DELRLLS   TFINLRAHGG L F+ TKV SWD    + D    DGRSY+SA+SE+  D  +TC+GNAK   GE+RMD+  SEIGYLG+ +SESYGL WKVRGFC DKSN EVFD VNVYG++ +SDIHH  FG+Y+YGHQ G+W  NKMHDN  YGFDPHDDSD+L IH N+V+ NG HGIIASKRC+ V                                       GLA+LESF  +V  N F+NN+YG+RFSVG   N   +N + ++  YN ++YLG+D PDV  +SG    NVF +N  SG   +TIK+K+A+ +  ++N           V FD +++ + + N   ++   E      ACF    DS   P C
Sbjct:   46 IRYAGTTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLKVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAEYNAYSYLGTDEPDVV-SSGRSQNNVFSQNSFSGAE-ETIKIKEADGTQFLDNVFEVGDADGLVVRFDNATENLMQGNTGLDDGEFELKVDNDACFDGEADSGYEPVC 508          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: Q7XAJ8_9PHAE (Mannuronan C-5-epimerase (Fragment) n=1 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAJ8_9PHAE)

HSP 1 Score: 421 bits (1082), Expect = 5.800e-135
Identity = 218/441 (49.43%), Postives = 284/441 (64.40%), Query Frame = 2
Query:  908 KGTCGNLGLPDIRYASTTKRVYVER-NG-TRGGCVTLSDIWE--LEKGALHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGASTVSFDGSSDTMYRDN 2212
            K  C +     +RY + + R+Y+E  NG TRGGCVTL  IWE  ++   L+ ++P++   +R+ TG WLLTEE+YV DG+TLQVHG + GGD DELRLLS  +TFI+LRA+GG L FL TKV +WD  K   D    DGRSY+SAVSEV  D  QTC+G AK + GE+RMD+ +SE+ YLG+H +E+YGL WKVRGFCVDK N E+FD VNVYG+I +SDIHHN FG+Y+YGHQ G+W  NKMHDN  YGFDPHDDSD+L IH N+VW NG HGIIASKRC+ V                                       GLA+LESF  +V +N F+NN+YG+R SVG G N    N++  S  +N F+YLG+D P+V   SG    NVF  N I G   ++I LK+A+ +  ++N  + A+ + F  ++ T+   N
Sbjct:    7 KPDCDSSIAVSVRYNAESARLYIESANGRTRGGCVTLEQIWEQQVDGSPLYAVDPKSGDVSRSATGTWLLTEEMYVEDGITLQVHGISAGGDADELRLLSTSDTFIHLRAYGGSLDFLSTKVFAWDTSKNAPDQDESDGRSYISAVSEVITDDRQTCNGRAKNNMGEARMDIENSEMAYLGYHGTETYGLTWKVRGFCVDKGNPELFDDVNVYGNIYDSDIHHNNFGVYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVWNNGYHGIIASKRCNGVSIQGNEVYGGSSGSAGIFLHRSSDNGIVKGNYVHDNGDAGLAMLESFNADVSDNTFENNKYGVRLSVGCGRNIFSKNVITGSAEFNTFSYLGADKPEVVD-SGRSQDNVFMENNIIGG-VESILLKEADGTQFIDNTFKDAAAIRFVDATKTLMSGN 445          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: A8CEP1_SACJA (Mannuronan C-5 epimerase n=1 Tax=Saccharina japonica TaxID=88149 RepID=A8CEP1_SACJA)

HSP 1 Score: 415 bits (1066), Expect = 3.220e-132
Identity = 231/470 (49.15%), Postives = 292/470 (62.13%), Query Frame = 2
Query:  905 AKGTCGNLGLPDIRYASTTKRVYVER--NGTRGGCVTLSDIW-ELEKGA-LHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCD--HVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGASTVSFDGSSDTMYRDNEEETGMEGVAKGSACFS--DDSSLTPKC 2290
            AK +C +     IRY+ T+KR+Y+E     TRGGCVTL DIW +L+ GA L+ + P +   + + TG WLLTE LYV DG+TLQVHG + GG  DELRLLS    FINLRAHGG L F+ TKV +WD  K  V T    GRSY+SAVSEV  D  Q CDG AK++ GE+RMD+ DSE+ YLG+  SESYGL WKVRG C D SNLEVFD+VNVYG+I +SDIHHNYFG+Y+YGH+ G+W  NKMH N EYGFDPHDDSD+L IH N+V+ NGNHGIIASKRC+    XXXXXXX                              G+A++E+F  +V NN F++N+YGIR SVG   N    N +  S++YN++TY GSD P V   SG            SG + +T+KL  A+ +  ++N  + A T+ F+    T+   N    G        +CF    DS+  P C
Sbjct:   32 AKPSCKSSTKVSIRYSKTSKRLYLESADGNTRGGCVTLEDIWRDLDGGAPLYAVKPSSGDVSSSITGTWLLTESLYVEDGITLQVHGKSAGGKADELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDDSKGRSYISAVSEVITDSKQKCDGRAKKNMGEARMDIEDSEMAYLGYFGSESYGLTWKVRGLCRDLSNLEVFDAVNVYGNIYDSDIHHNYFGVYTYGHEQGDWRRNKMHHNTEYGFDPHDDSDFLTIHDNEVYNNGNHGIIASKRCNGXXXXXXXXXXGAAKSVGIFLHRSSDDAIVKDNYVHDNGDAGMALMETFNADVSNNKFEDNKYGIRMSVGCADNVFSKNDITGSSKYNVYTYQGSDAPWVVD-SGRSQDXXXXXXXXSGGQ-ETVKLTMADGTEFIDNTFKSAKTIRFEDCQGTLMSGNSGLGGASLKVTDGSCFDKKSDSAYKPVC 499          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: D7FXE5_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FXE5_ECTSI)

HSP 1 Score: 380 bits (975), Expect = 4.230e-120
Identity = 193/358 (53.91%), Postives = 236/358 (65.92%), Query Frame = 2
Query:  941 IRYASTTKRVYVER--NGT-RGGCVTLSDIWELE--KGALHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTR 1993
            IRYA +T R+Y+E   NGT RGGCVTL  IWE    KG L+ ++P +   + + TG WLLTEELYV DG+TL+V+G+  GGD DELRLLS   TFINLRAHGG L F+ TKV SWD    + D    DGRSY+SA+SE+  D  +TC+GNAK   GE+RMD+  SEIGYLG+ +SESYGL WKVRGFC DKSN EVFD VNVYG++ +SDIHH  FG+Y+YGHQ G+W  NKMHDN  YGFDPHDDSD+L IH N+V+ NG HGIIASKRC+ V                                       GLA+LESF  +V  N F+NN+YG+RFSVG   N   +N + ++  
Sbjct:   46 IRYAESTARLYLESADNGTTRGGCVTLGQIWESRAGKGPLYAVDPDSGNVSTSATGTWLLTEELYVEDGITLEVYGSEAGGDADELRLLSTNETFINLRAHGGSLDFVSTKVFSWDTSTNSPDEDETDGRSYISAISEIITDEDETCEGNAKNTMGEARMDIESSEIGYLGYWDSESYGLTWKVRGFCEDKSNPEVFDDVNVYGNVYDSDIHHMNFGLYTYGHQQGDWRRNKMHDNSGYGFDPHDDSDFLTIHDNEVYNNGYHGIIASKRCNGVSIQGNEVYGGAETSAGIFLHRSSDDAIVKGNYVHDNGDAGLAMLESFNADVSENTFENNKYGVRFSVGCADNVFSNNTISNNAE 403          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: D8LD45_ECTSI (Mannuronan C-5-epimerase n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LD45_ECTSI)

HSP 1 Score: 385 bits (990), Expect = 1.020e-119
Identity = 226/543 (41.62%), Postives = 305/543 (56.17%), Query Frame = 2
Query:  752 STPTPVEPGLYIKRQPDPRTRG--TPDPVADLPSTPIVRPTNYPAWG---------PAHNPPA-KGTCGNLGLPDIRYASTTKRVYVERN--GTRGGCVTLSDIWELEKGA--------LHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSD-------ENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGASTVSFDGSSDTMYRDN---EEETGMEGVAKGSACFSDDSSL 2278
            + PTPV P +++   P    R   TP P A +  T        PA           P+ N P  K  C +     IRY++TT R+Y+E    G RGGCVT+  IWE   G         L+ ++P + + +   TG WLL E+LYV DG+TL+V G   GG  DELRL S          T+INLRAHGG L F  TKV  WD    + D    DGRSY+SAVSE+  DP+QTC+GNAK   GE+RMD+++SE+GY+GFH+SESYGL WKVRGFC DKSN EVFD VNVYG+I +S++HH  F +Y+YGHQ G+W  N +H N  YG+DPHDDSD+L IH N V+ N  HGIIASKRC++V                                       G+A+LES    +  N+F+ N+YGIR SVG   N++ +N + ++++Y I+TY GSDP +V+ T G    N+F  N + G     IKLK+++ + I NN       V F  +++ +   N   E+ T +E V       +D++SL
Sbjct:   49 TAPTPV-PAMHVSSAPTSAAREMTTPSPAAMIAFTAAPTMLMMPAGNGTAFNGTDTPSPNTPIPKPECNSTQAVSIRYSATTGRLYLEAGVEGERGGCVTVEQIWEARGGGTTTGAKAPLYAVDPVSGEYSDVITGTWLLEEDLYVEDGITLKVWGNGSGGYADELRLKSTPPTEDGGNGTYINLRAHGGSLDFEHTKVFGWDTTNNSYDMDETDGRSYISAVSEIVLDPTQTCEGNAKNTMGEARMDIVNSEMGYMGFHDSESYGLTWKVRGFCKDKSNPEVFDQVNVYGNIYDSELHHMNFAVYTYGHQQGDWRRNTVHSNSGYGYDPHDDSDFLTIHDNVVYDNNWHGIIASKRCNNVSIQGNIVYGGNDTSAGIFLHRSSDYAVVKDNHCYGNGDAGMAMLESSNAEISGNIFEGNKYGIRMSVGCRDNFVSNNTMTNTSQYAIYTYQGSDPAEVQPT-GRSQDNIFDSNTVVGGP-QAIKLKESDGTRITNNVFYEPGLVEFSNTTENVVTGNVGLEDATEVELVEPACFAETDEASL 588          
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Match: Q7XAK2_9PHAE (Mannuronan C-5-epimerase n=2 Tax=Laminaria digitata TaxID=80365 RepID=Q7XAK2_9PHAE)

HSP 1 Score: 377 bits (969), Expect = 7.940e-118
Identity = 224/474 (47.26%), Postives = 292/474 (61.60%), Query Frame = 2
Query:  905 AKGTCGNLGLPDIRYASTTKRVYVER--NGTRGGCVTLSDIWELEKGA--LHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRLLSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSEVKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFCVDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVEYGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX--GLAVLESFYLNVKNNVFKNNRYGIRFSVGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYISGTRYDTIKLKQAESSVIVNNRIRGASTVSFDGSSDTMYRDNEEETGMEG----VAKGSACFS--DDSSLTPKC 2290
            +K +C +     IRY++++KR+Y+E     TRGGCVTL +IW+   G+  L+ + P +   + + TG WLLTE+LYV DG+TLQVHGT+ GG+ +ELRLLS    FINLRAHGG L F+ TKV +WD  K  V T     RSY+SAVSE+  D  + CDG AK+  GE+RMD+ DSE+ YLG+  SESYGL WKVRGFC D SN EVFD VNVYG+I +SDIHHN+FG+Y+YGH+ G+W  NKMH N EYGFDPHDDSD+L IH N V                 XXXXXXXXX                      XXXX    G+A++ESF  +V NN F++N+YG+R SVG   N    N++  S++YN++TY GSD P V   SG    N+F  N I+G   ++IKL  A+ +  ++N  + A T  F+ +  T+   N   TG+      V+KG ACF    DS   P C
Sbjct:   35 SKPSCKSSTKVSIRYSASSKRLYLESADGKTRGGCVTLEEIWKDLDGSAPLYAVKPSSGDVSSSATGTWLLTEDLYVEDGITLQVHGTSAGGNANELRLLSTSKDFINLRAHGGSLDFVSTKVFAWDTSKNKVRTDGSKARSYISAVSEIITDSKEKCDGKAKKTMGEARMDIEDSEMAYLGYQGSESYGLTWKVRGFCKDGSNPEVFDEVNVYGNIYDSDIHHNHFGVYTYGHEQGDWRRNKMHHNREYGFDPHDDSDFLTIHDNKVXXXXXXXXXXXXXXXXXXXXXXXXXXGSSKSVGIFLHRSSDDAIVKDNXXXXNGDAGMALMESFNADVSNNKFEDNKYGVRLSVGCADNVFSKNVISDSSKYNVYTYEGSDDPWVVD-SGRSQDNIFSDNTITGGD-ESIKLTMADGTEFIDNTFKRAKTARFEDAETTLMSGN---TGLGSATLKVSKG-ACFDKKSDSDYKPVC 502          
The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig3095.8371.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90)
Total hits: 25
Match NameE-valueIdentityDescription
D7FMJ0_ECTSI2.180e-26262.24Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
A0A6H5KSU6_9PHAE2.580e-18159.34MEP3 protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 T... [more]
Q7XAJ7_9PHAE2.170e-14054.93Mannuronan C-5-epimerase n=1 Tax=Laminaria digitat... [more]
D7FXE4_ECTSI4.000e-13848.54Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D7G339_ECTSI5.960e-13649.25Mannuronan C-5-epimerase n=2 Tax=Ectocarpus silicu... [more]
Q7XAJ8_9PHAE5.800e-13549.43Mannuronan C-5-epimerase (Fragment) n=1 Tax=Lamina... [more]
A8CEP1_SACJA3.220e-13249.15Mannuronan C-5 epimerase n=1 Tax=Saccharina japoni... [more]
D7FXE5_ECTSI4.230e-12053.91Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
D8LD45_ECTSI1.020e-11941.62Mannuronan C-5-epimerase n=1 Tax=Ectocarpus silicu... [more]
Q7XAK2_9PHAE7.940e-11847.26Mannuronan C-5-epimerase n=2 Tax=Laminaria digitat... [more]

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Alignments
The following features are aligned
Aligned FeatureFeature TypeAlignment Location
H-paniculata_contig3095contigH-paniculata_contig3095:1438..17888 +
Analyses
This mRNA is derived from or has results from the following analyses
Analysis NameDate Performed
Diamond blastx: OGS1.0 vs UniRef902022-09-19
OGS1.0 of Halopteris paniculata Hal_grac_a_UBK monoicous2021-02-24
Properties
Property NameValue
Taxonomic scopeEukaryota
Seed ortholog score328.9
Seed ortholog evalue5.7e-87
Seed eggNOG ortholog2880.D7G8D9
KEGG rclassRC00467
KEGG koko:K15920
KEGG ReactionR01433
KEGG Pathwayko00520,ko01100,map00520,map01100
Hectar predicted targeting categoryother localisation
EggNOG free text desc.protein xylosyltransferase activity
EggNOG OGsKOG4157@1,KOG4157@2759
Ec32 ortholog descriptionMannuronan C-5-epimerase N-terminal fragment
Ec32 orthologEc-23_000490.1
EC3.2.1.37
COG Functional cat.U
CAZyGH3
Best tax levelEukaryota
Best eggNOG OGNA|NA|NA
BRITEko00000,ko00001,ko01000
Exons22
Model size2724
Cds size2154
Stop1
Start1
Relationships

The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameSpeciesTypePosition
mRNA_H-paniculata_contig3095.8371.1prot_H-paniculata_contig3095.8371.1Halopteris paniculata Hal_grac_a_UBK monoicouspolypeptideH-paniculata_contig3095 1971..17457 +


The following UTR feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929950.773132-UTR-H-paniculata_contig3095:1437..15421622929950.773132-UTR-H-paniculata_contig3095:1437..1542Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3095 1438..1542 +
1691481083.0741494-UTR-H-paniculata_contig3095:1437..15421691481083.0741494-UTR-H-paniculata_contig3095:1437..1542Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3095 1438..1542 +
1622929950.7901573-UTR-H-paniculata_contig3095:1936..19701622929950.7901573-UTR-H-paniculata_contig3095:1936..1970Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3095 1937..1970 +
1691481083.0888002-UTR-H-paniculata_contig3095:1936..19701691481083.0888002-UTR-H-paniculata_contig3095:1936..1970Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3095 1937..1970 +
1622929951.1386652-UTR-H-paniculata_contig3095:17457..178881622929951.1386652-UTR-H-paniculata_contig3095:17457..17888Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3095 17458..17888 +
1691481083.322701-UTR-H-paniculata_contig3095:17457..178881691481083.322701-UTR-H-paniculata_contig3095:17457..17888Halopteris paniculata Hal_grac_a_UBK monoicousUTRH-paniculata_contig3095 17458..17888 +


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameSpeciesTypePosition
1622929950.8131058-CDS-H-paniculata_contig3095:1970..20171622929950.8131058-CDS-H-paniculata_contig3095:1970..2017Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 1971..2017 +
1691481083.0983384-CDS-H-paniculata_contig3095:1970..20171691481083.0983384-CDS-H-paniculata_contig3095:1970..2017Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 1971..2017 +
1622929950.8294632-CDS-H-paniculata_contig3095:2552..26341622929950.8294632-CDS-H-paniculata_contig3095:2552..2634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 2553..2634 +
1691481083.1082683-CDS-H-paniculata_contig3095:2552..26341691481083.1082683-CDS-H-paniculata_contig3095:2552..2634Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 2553..2634 +
1622929950.849941-CDS-H-paniculata_contig3095:4778..48891622929950.849941-CDS-H-paniculata_contig3095:4778..4889Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 4779..4889 +
1691481083.1174452-CDS-H-paniculata_contig3095:4778..48891691481083.1174452-CDS-H-paniculata_contig3095:4778..4889Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 4779..4889 +
1622929950.8649998-CDS-H-paniculata_contig3095:5602..56941622929950.8649998-CDS-H-paniculata_contig3095:5602..5694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 5603..5694 +
1691481083.1332235-CDS-H-paniculata_contig3095:5602..56941691481083.1332235-CDS-H-paniculata_contig3095:5602..5694Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 5603..5694 +
1622929950.8814418-CDS-H-paniculata_contig3095:5984..61051622929950.8814418-CDS-H-paniculata_contig3095:5984..6105Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 5985..6105 +
1691481083.1441975-CDS-H-paniculata_contig3095:5984..61051691481083.1441975-CDS-H-paniculata_contig3095:5984..6105Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 5985..6105 +
1622929950.8959687-CDS-H-paniculata_contig3095:7982..82051622929950.8959687-CDS-H-paniculata_contig3095:7982..8205Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 7983..8205 +
1691481083.1532564-CDS-H-paniculata_contig3095:7982..82051691481083.1532564-CDS-H-paniculata_contig3095:7982..8205Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 7983..8205 +
1622929950.9093964-CDS-H-paniculata_contig3095:8643..87911622929950.9093964-CDS-H-paniculata_contig3095:8643..8791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 8644..8791 +
1691481083.1635098-CDS-H-paniculata_contig3095:8643..87911691481083.1635098-CDS-H-paniculata_contig3095:8643..8791Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 8644..8791 +
1622929950.9207752-CDS-H-paniculata_contig3095:9138..92481622929950.9207752-CDS-H-paniculata_contig3095:9138..9248Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 9139..9248 +
1691481083.1755285-CDS-H-paniculata_contig3095:9138..92481691481083.1755285-CDS-H-paniculata_contig3095:9138..9248Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 9139..9248 +
1622929950.934438-CDS-H-paniculata_contig3095:10309..103801622929950.934438-CDS-H-paniculata_contig3095:10309..10380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 10310..10380 +
1691481083.1883366-CDS-H-paniculata_contig3095:10309..103801691481083.1883366-CDS-H-paniculata_contig3095:10309..10380Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 10310..10380 +
1622929950.9486566-CDS-H-paniculata_contig3095:11002..111161622929950.9486566-CDS-H-paniculata_contig3095:11002..11116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 11003..11116 +
1691481083.1981585-CDS-H-paniculata_contig3095:11002..111161691481083.1981585-CDS-H-paniculata_contig3095:11002..11116Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 11003..11116 +
1622929950.9656167-CDS-H-paniculata_contig3095:11797..119201622929950.9656167-CDS-H-paniculata_contig3095:11797..11920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 11798..11920 +
1691481083.2079277-CDS-H-paniculata_contig3095:11797..119201691481083.2079277-CDS-H-paniculata_contig3095:11797..11920Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 11798..11920 +
1622929950.9809852-CDS-H-paniculata_contig3095:12211..123041622929950.9809852-CDS-H-paniculata_contig3095:12211..12304Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 12212..12304 +
1691481083.2191076-CDS-H-paniculata_contig3095:12211..123041691481083.2191076-CDS-H-paniculata_contig3095:12211..12304Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 12212..12304 +
1622929950.9994063-CDS-H-paniculata_contig3095:12705..127991622929950.9994063-CDS-H-paniculata_contig3095:12705..12799Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 12706..12799 +
1691481083.2273443-CDS-H-paniculata_contig3095:12705..127991691481083.2273443-CDS-H-paniculata_contig3095:12705..12799Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 12706..12799 +
1622929951.012546-CDS-H-paniculata_contig3095:13340..133561622929951.012546-CDS-H-paniculata_contig3095:13340..13356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 13341..13356 +
1691481083.2356496-CDS-H-paniculata_contig3095:13340..133561691481083.2356496-CDS-H-paniculata_contig3095:13340..13356Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 13341..13356 +
1622929951.0250359-CDS-H-paniculata_contig3095:13826..138701622929951.0250359-CDS-H-paniculata_contig3095:13826..13870Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 13827..13870 +
1691481083.2439923-CDS-H-paniculata_contig3095:13826..138701691481083.2439923-CDS-H-paniculata_contig3095:13826..13870Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 13827..13870 +
1622929951.0391753-CDS-H-paniculata_contig3095:14336..144141622929951.0391753-CDS-H-paniculata_contig3095:14336..14414Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 14337..14414 +
1691481083.2534795-CDS-H-paniculata_contig3095:14336..144141691481083.2534795-CDS-H-paniculata_contig3095:14336..14414Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 14337..14414 +
1622929951.0537245-CDS-H-paniculata_contig3095:14871..151251622929951.0537245-CDS-H-paniculata_contig3095:14871..15125Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 14872..15125 +
1691481083.2672262-CDS-H-paniculata_contig3095:14871..151251691481083.2672262-CDS-H-paniculata_contig3095:14871..15125Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 14872..15125 +
1622929951.085619-CDS-H-paniculata_contig3095:15522..155711622929951.085619-CDS-H-paniculata_contig3095:15522..15571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 15523..15571 +
1691481083.2748253-CDS-H-paniculata_contig3095:15522..155711691481083.2748253-CDS-H-paniculata_contig3095:15522..15571Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 15523..15571 +
1622929951.1000273-CDS-H-paniculata_contig3095:16313..163771622929951.1000273-CDS-H-paniculata_contig3095:16313..16377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 16314..16377 +
1691481083.282641-CDS-H-paniculata_contig3095:16313..163771691481083.282641-CDS-H-paniculata_contig3095:16313..16377Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 16314..16377 +
1622929951.11438-CDS-H-paniculata_contig3095:16860..169621622929951.11438-CDS-H-paniculata_contig3095:16860..16962Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 16861..16962 +
1691481083.2958403-CDS-H-paniculata_contig3095:16860..169621691481083.2958403-CDS-H-paniculata_contig3095:16860..16962Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 16861..16962 +
1622929951.1270597-CDS-H-paniculata_contig3095:17339..174571622929951.1270597-CDS-H-paniculata_contig3095:17339..17457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 17340..17457 +
1691481083.3046467-CDS-H-paniculata_contig3095:17339..174571691481083.3046467-CDS-H-paniculata_contig3095:17339..17457Halopteris paniculata Hal_grac_a_UBK monoicousCDSH-paniculata_contig3095 17340..17457 +


Sequences
The following sequences are available for this feature:

protein sequence of mRNA_H-paniculata_contig3095.8371.1

>prot_H-paniculata_contig3095.8371.1 ID=prot_H-paniculata_contig3095.8371.1|Name=mRNA_H-paniculata_contig3095.8371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=718bp
MEVPTSLTPADGYKIRVGLHGTQLFDCTSTFSIIQDIPVSTLEVFAPALV
SADDLQVGNGYGDDDSASVVLDTSSSTGSQSLFRALRSSNSPSFDAYSET
GIEGNDIIYVRWEYNDGMGGSFARFNIDLYYCGGGCERNENCGQAVARLC
EGCPDSSGEERVPLPFPYSSHNYKIRVSTYKSVQRSVSACSPKFEITARE
HPEYSTPTPVEPGLYIKRQPDPRTRGTPDPVADLPSTPIVRPTNYPAWGP
AHNPPAKGTCGNLGLPDIRYASTTKRVYVERNGTRGGCVTLSDIWELEKG
ALHPINPRTNKRARAPTGVWLLTEELYVSDGVTLQVHGTARGGDCDELRL
LSDENTFINLRAHGGILSFLGTKVISWDEGKGTVDTHHEDGRSYVSAVSE
VKYDPSQTCDGNAKEDKGESRMDVIDSEIGYLGFHESESYGLVWKVRGFC
VDKSNLEVFDSVNVYGDIINSDIHHNYFGMYSYGHQDGNWSYNKMHDNVE
YGFDPHDDSDYLIIHGNDVWGNGNHGIIASKRCDHVQITDNHVYDGFNTG
IFLHRSSDFAIVSGNHVHDNGDAGLAVLESFYLNVKNNVFKNNRYGIRFS
VGAGYNWIHDNIVDSSTRYNIFTYLGSDPPDVEGTSGLPIGNVFWRNYIS
GTRYDTIKLKQAESSVIVNNRIRGASTVSFDGSSDTMYRDNEEETGMEGV
AKGSACFSDDSSLTPKC*
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mRNA from alignment at H-paniculata_contig3095:1438..17888+

Legend: UTRpolypeptideCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
>mRNA_H-paniculata_contig3095.8371.1 ID=mRNA_H-paniculata_contig3095.8371.1|Name=mRNA_H-paniculata_contig3095.8371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=16451bp|location=Sequence derived from alignment at H-paniculata_contig3095:1438..17888+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
AGGTCCACGCGGTCGTTTCGATATCGACCTGTACCAGTGCAGCGACGCCT TTTGTGGACAAAGTGACTGCGGAGAATTCGTCGTCAACATTTGTGACAAG CCTCGGTGAGAATCCGTCATGTCCTTTCTCCAATTCTACAAGTACAGTAC TTGATGTGGCATTTGGAGTGGTATGGAGAAAGGTTTAATTGCGGAGTTAT TAAAAACAATCATCTCTATGCAATAGGAGTTGTATTAGCATTTCGGCACC TTTTGAAGCGTTGATGTTTGTGCTAACGTTGGGCTGATTGTGTGTTGTGT TTTGGGATGAGAGGCAGAACAGGGTTTACTGGTTTACTGGTTTACTGGTT TACTGGTACCTGAGCGAGTAGCTGGCAAGACAGACATGAGCATTGCAACT TTTTTCGCCGCACCATTTCTCCGATAGTGGCGTGACATTTAACACAGCGT CCAACTTTGCATGAATACCATTAAATACATTGAAACCCTTGAATACCAGG ATTGGATGCACCGCATCCGACGGAGACTACGTGATGGAGGTGCCCACTTC GCTAACACCGGCCGACGGCTACAAGATCAGGCAAGACATTACCGTGGCAA GCACTTGAGATAAACATAAATGAACATGAAGAATAGGTAGCTGGCGATAA GATGACAGTAGAAGGCGTGACAATGTCATGAGCTATTTTGGTGGTGGATG TATTTCTTTATGCTGTTATTTCGACCCCGATGAGACCGCGTAGATGTATC ATGACGTGGAAAAGTAATTACACATGTATATATGGCGAAGTGTCGTTTGG TCGTGAACCAACCAGAGTGCTTTGAAAAATGACAGGAACAGTATCGGCGA GCCTATCTCCATTGTAGCGATTACATTATTGTTTTTGCCTACGTCATGTG TCATTATCTGTAGTAGGCAGGGTTGGCCCTTTAATCGCCACCTCCGAGGC GTGCGTTACTCAAGCATTTCGCATCTCACAAAGCGATATCTGCGTGGATA TAGACGCTTGGACTACCGCTTGTTTATTTTGATAGTCAGCATTCAATATC TGAAACATGGTCATGTAATTTAATGTTAAAATAGGCTGCTGCTGTGTACA AAATTTCTCTTGCAGAGTTGGCCTGCACGGTACGCAGCTGTTCGACTGCA CGTCAACTTTCAGCATTATCCAAGACATTCCCGTATCCACATTGGAGGTA CGAAGTCTATCCCCTGGTCTCTAGAACATGTGCAATACTGTTCACACAGG AATACAATATGAGTTCAGGGTGATTTAAACGATATCGTCAAGTCCATAAT GGTTGACAATAGGAAGAAGTAAGCAGATTATGGTAACGGTCATGTATCAT ATCATACATGGTATGCTATTTTTCCATTTGTATGGCCTCAGGGTTGCTGT AATGCACACTCCTGTACGCGAGATTACGATTAGGGAGGCACACTGTTAAA GGGACCAACTTGTTGCCCTTTCGCACCTATGAAACTTGGTATATCTCCAC AATCACGGGGTTAAATCGACAACCGAAACATGGGTGCACACCGCATGATT GAAAAGGTTGCACACATACCGGTTCTGCGTGTTTGGTCGGTGTAAGTCCA TCTCCTATAGGGCCGAAAAACAAACTCGAAAACGTAATTCGTATTTTTGT ATTAGAGATTTTCGATTCCTCATCCTGTTGTCCCGAAAAACTCGAAATAT GGTCTAGAGAAAATTGTTTTGGGAGGACCGACAACAGCTCCAAGCTATAA TAATCTGGCATTTTTTTTACGGCCCTCGCATTTCATCAACAGAATCGATT TTCTGGGAGATACGCAGGCGTTACTCTGCTTTCCTCTCAGAAGGTTGATA TTTCATAGCCCACAGAGGGACACGTACGCTGATCGCAGATGCCACTAGCA CATGCGTAATCCAACGTGTGAACCCGGTCGTCCTATGGCAAGTTTGGAGG AATGGCAGACGTCTATTACATCGGCGCTTGGTGCTGTAGTGGCGGCTGTC GAATACGTAGACGAAGAGGACAGACGCATTTAATTGCTGGGTTCAGGGGC GCTTTCTGTAGAATTATCCACTATGTCTTGTACACACCCGAACTGAATCC TTGAGCCCTCGGTTCTCTCCATACTCATTCCACGCATGCGTTTGTCTTGA TTTGTATTGCGGTGGATGTTACATCCATGGTGGTCCGCAATACTGTGTGC TGTGTGCTGGACGAGACCTGGTGTGTGTTTGAAATTCTCTCGCTAATTGC GCCGCTTACAAAACGCCATCAAATCTCCAGCAAACCGCATGTAAATTTTT GAACCTGTAAGGCTAGGAACCATTTTTTCATCATCAGATTTTTGCACAGC GAAAAATAGCAATTAATGTTTTTCAACTGGAGGCTTTTTTCGACCCTATA GGAGATGATGACCTATAGCGTTCAGACTTTCTTTCCCCCGACAAAAAACA GATGCTAAAATTGTTGTGCCTAAACATGCTGAAGAATGAACGAGTTTTTT TTGTATTCCTTTTTGGAAGACTTTCGCGGGGTTTAGCCGGATTCAGCTTG ACGTATTTCCACAATCACCGGATTAAATCGAAAATCGAAACGTGGGGGCA CATCGCATGATTGAGACGGTTCCACACATTCCGGTTCCGCAAGTTGAGTG GGTGGTACCGGATTAGGCTTTTTGCCCCCCAATAGGGCAATAATTTGGTT CTATTAACAATAATTTGGTTCTATTAACAATAATTTGGCTCTATTAACAA TAATTTGGCTCTATTAACAATAATTTGGTTCTATTAACAATAATTTGGCT CTATTAACAATGTACCTCCGTAATAGGAACCCGATTTTACAACTTAAGCA GTATATGTGGACAAGGATTAAATGCCAGACCAATTTGTCGTGTCATTGCA CTCGCTGTTGTGATTGGTGTGTCGTGTTTTGTCTTGACTTGTCTCATATT TTTTGCTCAGTGCCTTCATGTCTTGGTGTACCTCACTGCAGTCGACAGGG GAGATTTCACATCTTCAGTGAGTGAATCAAATCAGTCAATGCTTTCTTTT GGCCTAATGGTGAAGTAGCAAGTACAAACGAATACCTTCGAGTACCGTAC TGTACTACGCTTAAGTACACTCCTCACAGTTGAGTGGTGCAAAATTGAAT ATTAATATTGCTACTAATGCTACTGACAGTATCTCTTTCGGCACGATGCT GTTTCGTGCTGGTGGTTCAGGTGTGCAGCTACAGAGTTTATGCTGTACTG TGCTCTACTTGTACCCGTCTTGGCCTCTGCCTCTGCCTCTGCCTCTGCTT GATATGTCGTGTGTTGTGTGTTGTGTTTTTATCGGTTGCAGGTTTTTGCT CCTGCTCTGGTGAGCGCGGACGATCTCCAAGTGGGGAATGGTTATGGCGA TGATGACAGTGCTTCTGTAGTGCTCGACACCTCGAGCTCTACAGGCAGTC AGGTTGGTGATCACTTCGTCGTTTTTTTACTCGACTTGTAAACGCGGTGG CCGGGTGCATCTATGTATGTGTGATGGTGATTTGGTGTGGCAATGTGCCA CAGTGAAGGTGTGGCACTGTGCAGCGCATGCCATGATAGATGATGTACTT GTTTGCTGGTATATGTTATGTGATGCAGTGTACTGCTGTGAAAGACAATA TTTCACTGTCACGAGGCGTTGACGTATGAAGCCTATGTGTTGCTTGCTGG TGAAAACATCATGGTCACTCACTCCGGCATCCCGGCATCCTGTGTTACAT ACCAGTACTCATATTACAAGTCACGTCATGTTTCATGTTGATCACCCAAG CACACTTGTGTGCCCGTAGTATTCAAGGAAGATTTTGAATATCACGTGAA AATAACATCGTGCACCATCTTGCTCGTTTTGAACACAATTGAAGGTGCTC CCGTTCATTTATTGCACCAGTGGTGTTTCCCGATGCGAGTCAAGTCTACT AGTAGCTGCATTCAGGTACCTCGCGTTCACCACTCTTGAACAAACCCATG GCGTCAACGAAAACTTTCATCAGGAAACACAGTGCGTTCGATGTACGTGT ACGTGGTTTTCGTCTTTTGTTGTGCTCTTGCCTACATCTTGTCTTCTATG GCGTTCCGCTTGACATTCCGACATGGTACCTATGCCCGTCTTGCGTCGCT TCCGTGACTGTGCAGAGTTTGTTCAGAGCGCTGCGGTCATCGAACAGTCC TTCGTTCGATGCCTACTCTGAAACAGGCATCGAAGGAAACGACATCATTT ATGTCAGGTACTGGAAAATGACAAAAAAAAATACCAACATTGACGATGGA TTCCGCGTGGCGTGTGATGGTCGAATTCGAACACACGTCCTTATTTAAAG GCACCGGCAGGCTATACTTCCTATAGAAAATTATATTGAGCACACCGAGA TCACGCACACTTGAATGGTAGACGTTATGTTCGCTAATGACAGATGTCGT TTCATGGCTTTGTAATATGGTGTAATGAACACGCAAGATTTTTCACCATC GTCTCGTGTGCGGTGTCGTGTCGACCGTGGCGTGTACCATACTACAGATG GGAATACAACGATGGCATGGGAGGGAGCTTCGCTCGTTTCAATATCGACT TGTACTATTGTGGCGGAGGTTGTGAACGAAATGAGAACTGTGGACAGGCT GTGGCTAGACTTTGCGAGGTACGGCGCGTTTCATTCATGTTTGATATTTC TTAACAGGTATATACCCTGAAACTCGGAAATATCGCGAGTATCGTAGCTG ACCATACCCATGGATATCACACCGTGCAATCTTTCACGGGCGTGTCACTT CTGTGTGGCACCTGCATGACGTGGAGAGGAGTGCGATATCCACGTGAGGT GTAATAATATCAGAGGTAGAGGTAGATGGGAATCGTGGCGAGAACGTGCT TGTGTAGCTTCAAAGGCGTCTTCGTGGAGCGTGTCTACCTGGCACTCATG TATCGCTCCTCTGTAGTGAGACGTTTCACTAACTCAACGGCAGGCAGGAC AAGCAACAGGGAACGAAGTAAATATTAAGTGTGGTAAATGTACAACTTGA TTGGTTTACAAATCGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTTGGTT ACCTTCAGATGACTGCAAATGCGCACCATAGTTATTCGAACAGAGGTTAA CTTAACCTGATTGGTTTGTAAAATGGTGCGGTAAAATTGTTTTTCCCAAT GAACCATGAGACGAAAAGATCGAAGCAAAATTAAAAAAATCCGAACCAAC TTCACTGCCGTCCTCTGTGTTGGTTGCTCTACAGCTATGATGTCGGGTTA TTGTCTGCAAAGTGCTTGTGTGAAGCGTGTGGGGTTTCTTCAATGTGTAT ATTTTCAGCTTCACCTCGAACTTTCTCTCGGACCCGCGGTCGTAAGATTT GGTATGATATTACACATATCAATCTGTTGGATACAGTGCCTGTTGTTTGC AGCACAGATGGTGAATATTATATACCAGGTAGTATTTCAGCCGTACGCAC CCACCTATAGGTGCCCAACGATCTGTCCCTGTTTGTTTTTACGGGTCGCA GACGCGTCTTCGTCTGTTCCTACCCGGTGCGCGATTTCACCCCCTGTAAC GCAGCGTAACTTTTTCACGTTCACACCCTGGTGGATATCACGCGGCGCGA CTTGTCTTGGAGGACATTTTTTATTATCATTATTTACGCTTTACCCTTTA CGCTTTTCGCTTTACATTTGCGCCCGGTGTGTGTGAGAGAGAAACAGAGG TATAATATACCTCTATCTCTTTCTCTAAGGTTTTAACGATACACGCCAGA TATGCTCAGTGCCAGTAGTATATGGGCTCTATGCGCCAACACATAGACTA TGTTTGCTTGCTGTAGGTGACCCGGCATCCCGTATGATGGTCTGCAAGCC TAGCTTTGCAACAGCACTATTATAGTCTAGGATAGCACGTGTCTGAAGTA AATATTACAGCTGGTGATGATGATGATGATGATGATGATAATGATGATGA TGATGATGATAATGATGATGATGGCGATGGTGATGATGATGATGATGATG ATGATGATGATGATGATGATGATGATAATGATAATGATGATGATGATGAT GATGATAATGATGATGATGATGATGATGATGATGATGATGATGATGATAA TGATAATGATGATGATGATGATAATAATGATGATGATGATGATGATAATG ATGATGATGATGATGATAATAATGATGATGATGATGATGATGATGATGAT GATGATAATGATAATGAAAATCACGTGGACTGGTGAAATGAAAGTGATAT GAAAGTGGAATGAAAGTGGAATGAAAGATGATACATTGGAAGAAGGAACC CGAATGGAACACTTGACACTTTCGATGTTTTCGTTCAATGTCGATGAGAC GACACGAAAACACCTGTGATGACGATCGATCGAAATACATCAAAAAAGAA AAGTCAAAGAGAGTATAAGTGCAGTTTGATCAAGCAGATCAAGTAGATCA AGTGACCCGGACCCATCATGTGCACTTGTACTGGTGATGTCACAGGGGTG CCCCGATTCGTCCGGGGAGGAGAGGGTGCCGCTACCCTTCCCTTACTCGA GTCACAACTACAAAATAAGGGTTTCCACGTACAAGAGCGTTCAAAGGTCG GTGTCGGCATGTTCTCCCAAGTTCGAGATCACAGCTCGAGAGCACCCCGA GTATTCCACTCCCACCCCAGTTGAACCGGGACTGTATATTAAGCGACAGC CGGACCCTCGTACTCGCGGTAAGTTGCTGCCTGCTACTGTTACTGCTACT GTTACTGTTACTGTTGCATCGCAAGTCGTACCAGGTGCCTTATTAGGTGG AATTGTAACTCGGGAAGATGGCGTTGTATCGCATTTATGTGGCATCATCC TAGAATGATTTTACGTGCGTGGCGGTTCTCCAGTACTGTTACTGCACCGG TATTTATGTTCAAGTTTGAAGTATGAAGGACATAGAGGCCTTGAAAAAAT ATCGTCTTAAAAAACGATAAATTGCAGTATAGTGCTATACGTCCAGCATG GCATAGTCCATAGTCTCTCCCTTGCTCGGACAGAGCGCGCATATGCGTGT GCATCGGAGCATAATACGCCACCGTGCGTTCGTCGCATTCGTGGAGATTT TATCTTTGTAAATAAATACCCGCTTCCCTTGCTCCCTCGTTCCTTCCTTC ACCCAGGGACACCGGACCCTGTCGCAGATCTCCCTTCTACGCCGATAGTA CGACCAACAAATTACCCAGCCTGGGGTCCCGCCCACAACCCGCCGGCGAA GGGTACTTGCGGAAACTTAGGCCTTCCCGATATCCGCTACGCGTCCACCA CAAAGTCAGTACTGTGCTGTTTAGTCCTGTGCTGTGCTGCGCCGTCGTGT CTTCTGGTCTAATGTAGAAATATTTTGGGCGAATGCCTGGATGTGGAAGC AGCGGAAAAGGTTTTTACCTCAGCCTTCCGGGGACTAAAAAAAAAAAAAA AATGTAGAAATATATGGCGTGGTGTGATGACGATGCACGAAATATGCCCA CGCCTAGTTGCTACACCTTAATTGGCTTGTGCATTTGTGTTTGTGCACTT GTCTTGTGCACTCCGGATGTGGTAACTGTCGATGCTATGTATCTATCATA TTTTTTTGCGTTAAATGCTAAACGTTCATTGTGTGCTGATTGGTGATTCA GGCGCGTGTACGTGGAGCGCAATGGCACTCGAGGTGGCTGCGTCACGTTG TCGGACATCTGGGAGCTGGAAAAGGGGGCCCTGCATCCAATCAACCCTAG AACAAACAAGCGTGAGTCACACCAAGCATAACATACATACAAACCTTGAA CACCAATCCTTCGCAACATGAGAGTTAAACGGTCATTGTCATGACTTCAA AATTTCCAAACCACAAACTGAGAGAGTAACTAAGTAATCTTGCTGTTGTT GTTCCTATTGCTTGAGCGACAAACTGCAATAGAGCTGTACGCGGTTTGGC CATACAGACATGACAGCACAGCACAGCACCCCACCGGAGACTGTACTGAA TGGATTCGTCATGTGCATTGTTTGTTGATCGATTGGTTGAAGGTCAACGT TCGACGGTGTGGAGCCAAAGGTCTATCTCCGGCTCTTGTTGCAACACAAG TGGATTTATCCAATTTATAATATGCACGCTTTTTTGTCCAAAACAGAACA CAATGCATTACAATTGAACGAATAGGTGTGTGTGTGTGTGTGTGTGTGTG TGTGTGTGTGTGTGTTGCGTTGAGAGCGGTATAATCCCCTACTGTGCTGT GGACTGTGTGTGCACTGTGTGAAGCATATTAGTCCAGAAGGTTGGCTCCT GGAACCACACCCTTGTTCCGGAATGAACGTGGGTAGAAACTCCGAAATTT ATTTCAAGAAAAGGATGAAGTGGTGAATGACCAAGGAGCAAGAGAAGACA TTCAACGAAAGATCAGCTGCTTTGTTTGTGTAGTTACCTTGCTAACGTTC AACGTTTCGTTCATTTTACGTGTTTTGCTGCATGATGTAAAAGGTATATC ATCTCGCTAGCGCGTGTACGTCGTCGGGTATACTGAAATGGCGCTGTACT CTACCATACCACGCTTATTACTCTACTTCGGAATCTAGCAGTCTATGACG TGCTCATGCTCACCTTGCTGGCCATTGCTGGCGAACGCTGTTCTCTTTTA GTAGATTTCACCGTCGTGAAGAGTTTGGTACTGTAAACCATAGTGTATGT GTATTTTCTGTGCTCCCCGCCCGTTGTCCTTCATTTTATTTTATTCTGCT CTACTCTTTTCCTTGTAGTATCTAAACTGACAATTACGGTGTTGTGTGTC TGTCTGGTTTACTGGTCCACAGGTGCCCGCGCTCCGACTGGGGTTTGGTT GCTTACAGAAGAGCTATACGTGTCCGACGGCGTTACGCTTCAGGTGACAC ACAACGAATGATACGTGTATTATATATTCCTCTTCCAATGCGAATTCTAA GGTGCTGACCGTCACGGCTATGGTCGTGGCTGTTTTGAAATAGCTTTTCA ACTCTGCAGTCAAGTCAAGTCAAGTCAAGTCAAGTCAAGTCAAGCGGAAG AGATGTGTAAAAACGAAGGTTTATGTCCGTTGTTCTTACTTATACTTATA CTTATACTTATACTTGGACTGCCGGAAAGAAGGTTTATCGTTCTCCTTCG TCCTTAATGTGTACATACAGGTGTAGAGGTGCCTTCCTTTCCTTCGTGGG TTAAGCGTAAGTATACAAAATTCTCCGAGCCGGGCAAGAGAAGAAGTAAT GCACAGTCTCGAGTCCAATTCTCTTGTTAAATAGGCTCGACAGTAAACTC GGTAGCCTTGTCTGTCTTACTATTTAACTTCCTATCCCCACGTTGTGTGT GGTTGATGCTTGCAAGTCTATTTGGTGATAAATGTTGATTCCACCGAGAG ACATGTCGAAAGATCATATGCCCGCACATGTATAGGGACGTTACTCGAGT ATCAACTGGCGCAAGTCAATTTAAGTGGCAGCTTACCGTACGAATATCTT GCTTTACATGCGTAGGTCCACGGCACGGCGAGGGGCGGCGACTGTGATGA ATTGAGACTGCTGAGCGACGAAAATACTTTCATCAACCTCAGGGCGCACG GGGGAATTCTGTCCTTCTTGGGAACCAAGGTACTAGTACCTGTACCTAAC ACCCACAAACACCATATACTATATTTAATGACAAATACACTGTCGAACAA TTACGCGACTTCGGTAAAGAGCAGTCAACAGCCCTGCTATGTGTCAAACA GCGACCCTTTGGTTGATTCGTTGGAGCAGTGCGTCGACAAACACTCAGGC TGTCAGACGCACCCCCAAGCTATGTCGTATCAGCACAAGCAAATATGTTT CGTTTTCGTCTGCACCCAAACAGCTCTTGGACGCTTTGTCTTGAGAATCT AACATGAGGTAACATAGTGTTATACCGTATTACGTGCTATTGTGTCCAAA GCGTTTGCCGGCGAGACACCGTTTTAGGGCTCGCGTGGTCATTATCGTTA TCTGTCGTGAAGTATGACTAGTAGGTGGCCGATACGAGTTACAATCCGCG TTTGCCTCGCTGCGCTCGTGACTAGGTACACCGTCTGAGGATTTTACCTT TAGCTATACCTTTACCTCATTTGACTAGGAAGATCCGCCTTGACAATTTT CTTCAATGTGAAATTATAAAACTGTTACGAAACGACGACCATGATGGGCA TGTCCACCTTGGCATATGGTGTGAATTATGAGGCATGAACTACTAATGTA ATATGAGGCATGAACTACTAATGTAATATGAGGCATGAACTACTAATGTA ATATTGACAGGTCATTTCATGGGATGAAGGCAAGGGCACTGTGGACACAC ATCATGAGGACGGTCGTTCATACGTCTCTGCCGTCAGCGAGGTCAAATAC GATCCTTCACAGACCTGCGACGGAAACGCAAAGGTGAGCAACCCACTGTA TGTGTATAATAAAAAGACGTTTCATGCCCGGTGGAAGCTGTACCGGAGAT CTTGCCTTTCTTCAAGAATGCCGCCTGCAGTGAAAGATGGCCTATGTAGT ATTGCTGGGAATGCTTGGTCCTGTCGCGGTCATTCTGAAGTGTACGTACC TTTTGTAGTGCATTAATATACTTCATAGAGGAAATGTCTTGTTGATCCCG GATTATTGCCGTGTACGACAAACTCTACTGGATGTTTAACTTGAAGTGTA CGCATCGTGACTACAACATCGCAGGAAGACAAGGGCGAATCCCGCATGGA CGTGATCGACAGCGAAATAGGCTACCTAGGCTTCCATGAGTCAGAATCGT ACGGACTCGTTTGGAAGGTAACTCTTTTCTACGCTTTCCTCAGCGGCACA CTTCACGCTCGGACTGAACGTAATTGATTGAATCATCATGCTCGTTCTCT TGTTATGCTGTCAATATGTATGTTACTGTTACTGCAATTATTATCTACAA TACTTGCGCGGCCGTTTAAACTTGCCCATCGATTGTGGGCAACCCGTCAG CGGTAGTGTACGAACAAGTGTAGCCATGTTAACAGTTGTACAGGGAGCGT GAGATGCTGTCTTTGCTGGTATTTGGTGTTGTCATGGTCGTCGCTACGTG CACACCGTTGTTGCGAGTACCGATTTTGGCCAGTTGTCAAGTTTTTGGGT TACTACATTTTTAATTCTGTCCCGTACTGGTATGATGCTGGTGATATAAA TGAATATAAATGGCGCAGGTCCGAGGATTCTGTGTGGATAAGTCAAACTT GGAGGTATTCGACAGCGTGAACGTATACGGCGATATCATCAACTCCGACA TACACCACAACTGTAAGTCCAGGTATAACACTACTCTAGTAAGACTTGAG AGCGCATTGTGGCGGTACAGCACTGGCTGAGGACTATGACGACAATACCT GCATGGGCGATGGCGATGTCGTGATATCACAGTACCGGGTAAAATTTGAG GGAGACATCAAAAATCGTTTTGCTGTGATCTCCCGGGGATAAACATGGAT AACCTCAAGTGCTGTGACTGTTTTTGGATCAGATATCTCCAAGGACTGCT AGTTCGAGTATTAATGATGTTAACCTCAATAATCGGTCGATGTGTCGTTT TGTTCGCCTAGCATTCGCGTGATGGTCCCGGCCACGATGCTAAGCATGAA ACACGCTCTCCATCCCACCCCATTGACCAATCCTGTCGCGGTGACGTGTT GAACTCGTTAACGCACCAACTGACGATGCTGCTTTTCTTGGGATGGAATG GTGCTTGCTTGCGGGGTGCGACAACGTCCAATTGACCAACCTTGAAACGT GCTGACGAACGCGTTAACGAACATAATGACGCTACTGACGGGGGCCAATC CAGACTTCGGCATGTACAGGTACGATAACCTGCCCTTCGTAAATGTCGAC AATATCAAAAGATGTGTTTGATGTCATGCCGAATGCAAATGGTTTTCCAT GTGTCAGATGACTGACTTGCACTGGTGACACGCTGGAATTGTTGGGCGTA TCCATGATTGAAGTCCCTTTGGCCGAACACGCAATGCACGCGTACTACAG GATACTACACTACATGAGTTTGTTTCACTCCATGGTCCGCTGCCTGTGCT CCAACATTTTTTTGCCAGGAGCTTACTGCTTCGTTTGGTAGGTGCTGCCG CCACTGCGCCTGACACACGAACTGAACTGAGGGTGGCCTTCGTAGAGATA GACAGGCACCAAGAGAGACATTTTACCGAGTCATGTCGAACTTTGTAGCT GATTTTTTCTGTCTTCTCCTTCTGGTACACAGTAATTGATTTTTACTCCC TACCCATTGGTTGGCTGTGTTTGGCATTGTGGTTTACAGCTATGGCCATC AGGACGGAAATTGGAGCTACAATAAGATGCACGGTAAGTGGAAGCAAAAT TTGACATGATGATTTTGTCGAGGTCACTCGAGAGCAGCAAATCGTCATCA TTATCATCATCATCATCATCATGCAGTTCTTCGTTTCGTCAATCGTTACT CATGATATGAGAACGGTTGAGGCATGTTACCGCACCCGAAAAATTATTAG CATTGCTTCTGTGAGTTGCCACTGTCGGCATTCTGCAAGTATGGTATAGT ATAGTTATTCACCGCATGCTTCGCCAGTTTGCCAACAGTGTATGTGATAC ATCACATTTTGACTTTCGCCTATTGTATCAATCAAAACCCTATTGTATAT CCAGCGTTGAGTAATTTCCCTTCCATCGTACATAATGTTTGCTTCCTCAT TACCACTAACTACTGACTATTGACTATTGACTATTGAGTGACCCTTGTGT TGTATGTCCACTTGTGGGGTTGTCGATGTGTTGATCTATCTGATGGCAGA TAACGTGGAGTATGGATTCGACCCTCACGATGACAGTGACTACCTCATCA TTCATGGAAACGACGTCTGGGGCAATGGTAAGCAGTGAGCAGCCAACTGG ACGCATGTAGAAGCGTGTAAAACCAACCGTAGGACGTAGGTTTGGGTGCC CAAGGCTGCCGTTACCAATTGCTCGGTAAAAATATACGTATGTATATACA TACTGCACATACCAGTATACTGTCAATCGTGATGCTCCGTCTTGGCAATA TGCATTAGACTAATCTAGTCTAGTCTTGTCCACCTACTGTAGTGCACTTG GTATTCATTACCCTTACCAATGATCCTTCATTGTACGGCGGCAACAGCCC AGAACTGAAATCATCACATCGCTACACGTACCTCTGTTTCCTGGCGATAC TATTAGACGCACTGTATTCTAATGTAATGTAAGCAAGTAGCATTGGTCCC CACGCCAGTGTTGACCATACCTTGCTATGCCGCACCATAACGCATCGACC TTCTCCCCCCGTGCCATCACCTCATTGGCGTCAGGTAACCACGGCATAAT CGCTTCTAAACGTTGCGATCATGTGCAAATAACGGACAATCACGTTTATG ACGGATTCAACACGGGGATTTTCTTGCACCGTAGCTCTGATTTTGCTATT GTGTCTGGCAATCATGTCCATGACAACGGGGATGCTGGCTTGGCGGTGCT TGAGTCTTTCTACTTGAATGTGAAGAACAACGTCTTCAAAAACAATCGCT ACGGGATACGCTTTTCCGTGGGCGCGGGGTACAACTGGGTGAGTTCCCTC GATTGATATCATTGCACTCGCGACAACTAGACGGTGCTTCAGAAGATGAC ACGTCGAGAGCTCGAGTTCTTACCCGGTGTTGGCTATCGAATGTCAATTT TCGTTGCATCAAGCCGTGCTGCTCGAGTTGCTAACTAAGTCGAAATTTGT AAGGCGTTGTTTTCTGTTTGCATGCCATATCATATCATATCGTGTTGAGA CCTGGTTCCTCTAGTCTTCTCCACTATGCTTGCTCTTGTGCTGTACGCGG CTGGGGGTGGTGTTTTGCAGCTACTAATACGTGAACATGGCGGAATGAGG AAACGGTCCTCGGAATCGGTTAATACAATAGGTCAGTTGGATTGCAAACG TCACTGCTTTATTCCGTATCCCTTGTCATTGGCAGATCCATGACAACATC GTGGACAGCTCAACCAGATACAACATTTTCACATGTGAGTATCGTTCAGT AGAACAGGTGACGCGTACCCCCATTCATGTTTTTGCTGTATTTGGCTTTT CTAGACCACCATATACAGTGTTCATCGATGTAGTTTGACATACTGTGTTT CATGGTCCCATATTTTGGTCGATGTAGAAGTCGTACCGTTCCAGCAGCTG CCGAGAAGATGACAGTGCAGTACACGAACTGCTCGGGCGAAAAAGAAGAA CAAGGCGTCTTTCATACACCCAAGTGTTTTTTGGGTATTCTGGATCCAAA TGTTTTGAATCTCAATGCTGAGGTACGTAACTTCGTGTGTCATGTACTAA ACGCAAGTGTCTTGGATGCTCGAATTGTTGCCAGCTATTCTCGAGAATTG AATAGCTCTACCAGTGTGTGCATGCATGCCTAGTTTCATGGGTCATGTGT ACTCTTTATCGGCATGGTAACAAGGCATTGACAGCGCCAGTCTAGCCGCG ACCCTCTAGTTTCAATCGAGGTATATGAAGAAGCCCTCTTCGATACAATT GCCGAGTGCGCTGTTCATTGAACAAAGCGCCCAAACAATTCCTTGTAGAT GGGCTGCAGCAAATGCAGGGCAAAGGTCACGTGAAATTTGAAATTAGAGC GGAGCTTGTCACTGTTGCTGCAGAAGCTGATGTCAACAATCCCCCCTTGT GGATATGATAGATGACTGGGTCACCGTTGCATTCCTGTGAGTTTTAATGC TGTTTTTGATGCCGTGGACACTGCAGACCTTGGGTCTGATCCGCCGGATG TGGAGGGGACTAGCGGGCTTCCTATTGGCAACGTTTTCTGGTGAGTATCC AGTACGTTATGTCATCAAGCCAAAAAAACACAGGTGGAGATTGAAAATAA CGTTTTCGGTGATAATCGCATGGCTATGTCCATTCTCGACAATCCAGCTG AGAGGTTACACATCGGCATCACACCATGTGTGGCTACCGTATAGGATGTT ACTGGTACGGTACCATGACGGTGTGCCGTTTGGACAAGGCGAGTCCTTAC AAGCCAAAGATGCGTGCGTTACCACGCTTTGCTGACGAGGACGGTAACAT ACAAAGATACAGAAGGGGATAAGGTCAGTCGTGATACGGGTAAGGTCAAA GAGTGTACGTGTGAAGATGAAATTCTCATTCTGATGTTCGAATTTGTCGA TGGCCATTCATCAATTTAGCAGGTATGTTAGAAGCATTGCGTTGGCTCCC AGGCGATTTTGTTCGTCTGAGTAATGAACTACGCTGCTTTCACCAACCGC GTTTGTTTTACCTACAATGACAGGAGGAACTACATATCGGGCACCCGGTA TGACACCATCAAACTCAAGCAGGCTGAATCAAGTGTGATCGTTAATAACC GCATCCGAGGGGCATCAACAGTATCGTGAGTTGTGGTGTTGTAGTCAAAC AATATTTACGAGATGCAGATAGACAGACACCGTAACATCCCTCAAAGCCT CAAAGTGGTAATTAGTTGAAAGTGCAGGCAATTCGCGCTTCCGCAGCTGC CGTTTTTCTTTCATGTGTTGCTTGAGCCCCGAAGTCTTGGACACGATAGA ATAGTTGCACATTAACACTCCGTTGACTTTTACTTAAATGTCGCTACTTT TTTTTCTATTCGGAAAGATATATTATTAGTAAAACCCAGAGTTCCCTCGC GAGCGGCGACGATGCAATCCTCCCAATTGATACTCCACGGAAGATCACTA CTCTTGAATCGTGATTGAATCCCACCGCAACACCCTGTGCTCTACATGGC AGGTTTGACGGCAGTAGTGATACGATGTACCGAGACAACGAGGAAGAGAC AGGCATGGAGGGTGTCGCCAAAGGTTCCGCCTGCTTTTCTGACGACTCAA GTTTGACTCCCAAGTGCTGACTGTGTTGATTGGTACCTCATTTGCGACCA GGAACCAATGCGATTTCCTCTGGTAGTAAATATGATCAGTTCCACTTTCT TGAAACGCTTTGTGTACCTCAACGCTGCCATACCTCGTCGTGTAGTATCA TATCGTAGATCTATTATATCCGGTGCTTGGACATGAATTATCTCTTGGAT GGATCGGTCTAGTCACTTGAGCTGCTTTTACAACAGAACAGCATAACAAA GTTTCTATTATGGACTGATCAAGCAATAGACAATGCTTAACGTATGACAA CAAATAAACTGAAGATACCGAATTTAAGGAGAATGAAGCACCACTCCCAT GTCCTTCGACTCGTGATAGTGCTTCAACTGGAGTCAACTAATAAGGGTGG TAGTATTATGAAGCTAAAGAAGGCAAGGGCACCTGAAATGTCGTTCCAGA G
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Coding sequence (CDS) from alignment at H-paniculata_contig3095:1438..17888+

>mRNA_H-paniculata_contig3095.8371.1 ID=mRNA_H-paniculata_contig3095.8371.1|Name=mRNA_H-paniculata_contig3095.8371.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=4308bp|location=Sequence derived from alignment at H-paniculata_contig3095:1438..17888+ (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGGAGGTGCCCACTTCGCTAACACCGGCCGACGGCTACAAGATCAGATG
GAGGTGCCCACTTCGCTAACACCGGCCGACGGCTACAAGATCAGAGTTGG
CCTGCACGGTACGCAGCTGTTCGACTGCACGTCAACTTTCAGCATTATCC
AAGACATTCCCGTATCCACATTGGAGAGTTGGCCTGCACGGTACGCAGCT
GTTCGACTGCACGTCAACTTTCAGCATTATCCAAGACATTCCCGTATCCA
CATTGGAGGTTTTTGCTCCTGCTCTGGTGAGCGCGGACGATCTCCAAGTG
GGGAATGGTTATGGCGATGATGACAGTGCTTCTGTAGTGCTCGACACCTC
GAGCTCTACAGGCAGTCAGGTTTTTGCTCCTGCTCTGGTGAGCGCGGACG
ATCTCCAAGTGGGGAATGGTTATGGCGATGATGACAGTGCTTCTGTAGTG
CTCGACACCTCGAGCTCTACAGGCAGTCAGAGTTTGTTCAGAGCGCTGCG
GTCATCGAACAGTCCTTCGTTCGATGCCTACTCTGAAACAGGCATCGAAG
GAAACGACATCATTTATGTCAGAGTTTGTTCAGAGCGCTGCGGTCATCGA
ACAGTCCTTCGTTCGATGCCTACTCTGAAACAGGCATCGAAGGAAACGAC
ATCATTTATGTCAGATGGGAATACAACGATGGCATGGGAGGGAGCTTCGC
TCGTTTCAATATCGACTTGTACTATTGTGGCGGAGGTTGTGAACGAAATG
AGAACTGTGGACAGGCTGTGGCTAGACTTTGCGAGATGGGAATACAACGA
TGGCATGGGAGGGAGCTTCGCTCGTTTCAATATCGACTTGTACTATTGTG
GCGGAGGTTGTGAACGAAATGAGAACTGTGGACAGGCTGTGGCTAGACTT
TGCGAGGGGTGCCCCGATTCGTCCGGGGAGGAGAGGGTGCCGCTACCCTT
CCCTTACTCGAGTCACAACTACAAAATAAGGGTTTCCACGTACAAGAGCG
TTCAAAGGTCGGTGTCGGCATGTTCTCCCAAGTTCGAGATCACAGCTCGA
GAGCACCCCGAGTATTCCACTCCCACCCCAGTTGAACCGGGACTGTATAT
TAAGCGACAGCCGGACCCTCGTACTCGCGGGGTGCCCCGATTCGTCCGGG
GAGGAGAGGGTGCCGCTACCCTTCCCTTACTCGAGTCACAACTACAAAAT
AAGGGTTTCCACGTACAAGAGCGTTCAAAGGTCGGTGTCGGCATGTTCTC
CCAAGTTCGAGATCACAGCTCGAGAGCACCCCGAGTATTCCACTCCCACC
CCAGTTGAACCGGGACTGTATATTAAGCGACAGCCGGACCCTCGTACTCG
CGGGACACCGGACCCTGTCGCAGATCTCCCTTCTACGCCGATAGTACGAC
CAACAAATTACCCAGCCTGGGGTCCCGCCCACAACCCGCCGGCGAAGGGT
ACTTGCGGAAACTTAGGCCTTCCCGATATCCGCTACGCGTCCACCACAAA
GGACACCGGACCCTGTCGCAGATCTCCCTTCTACGCCGATAGTACGACCA
ACAAATTACCCAGCCTGGGGTCCCGCCCACAACCCGCCGGCGAAGGGTAC
TTGCGGAAACTTAGGCCTTCCCGATATCCGCTACGCGTCCACCACAAAGC
GCGTGTACGTGGAGCGCAATGGCACTCGAGGTGGCTGCGTCACGTTGTCG
GACATCTGGGAGCTGGAAAAGGGGGCCCTGCATCCAATCAACCCTAGAAC
AAACAAGCGCGCGTGTACGTGGAGCGCAATGGCACTCGAGGTGGCTGCGT
CACGTTGTCGGACATCTGGGAGCTGGAAAAGGGGGCCCTGCATCCAATCA
ACCCTAGAACAAACAAGCGTGCCCGCGCTCCGACTGGGGTTTGGTTGCTT
ACAGAAGAGCTATACGTGTCCGACGGCGTTACGCTTCAGGTGCCCGCGCT
CCGACTGGGGTTTGGTTGCTTACAGAAGAGCTATACGTGTCCGACGGCGT
TACGCTTCAGGTCCACGGCACGGCGAGGGGCGGCGACTGTGATGAATTGA
GACTGCTGAGCGACGAAAATACTTTCATCAACCTCAGGGCGCACGGGGGA
ATTCTGTCCTTCTTGGGAACCAAGGTCCACGGCACGGCGAGGGGCGGCGA
CTGTGATGAATTGAGACTGCTGAGCGACGAAAATACTTTCATCAACCTCA
GGGCGCACGGGGGAATTCTGTCCTTCTTGGGAACCAAGGTCATTTCATGG
GATGAAGGCAAGGGCACTGTGGACACACATCATGAGGACGGTCGTTCATA
CGTCTCTGCCGTCAGCGAGGTCAAATACGATCCTTCACAGACCTGCGACG
GAAACGCAAAGGTCATTTCATGGGATGAAGGCAAGGGCACTGTGGACACA
CATCATGAGGACGGTCGTTCATACGTCTCTGCCGTCAGCGAGGTCAAATA
CGATCCTTCACAGACCTGCGACGGAAACGCAAAGGAAGACAAGGGCGAAT
CCCGCATGGACGTGATCGACAGCGAAATAGGCTACCTAGGCTTCCATGAG
TCAGAATCGTACGGACTCGTTTGGAAGGAAGACAAGGGCGAATCCCGCAT
GGACGTGATCGACAGCGAAATAGGCTACCTAGGCTTCCATGAGTCAGAAT
CGTACGGACTCGTTTGGAAGGTCCGAGGATTCTGTGTGGATAAGTCAAAC
TTGGAGGTATTCGACAGCGTGAACGTATACGGCGATATCATCAACTCCGA
CATACACCACAACTGTCCGAGGATTCTGTGTGGATAAGTCAAACTTGGAG
GTATTCGACAGCGTGAACGTATACGGCGATATCATCAACTCCGACATACA
CCACAACTACTTCGGCATGTACAGACTTCGGCATGTACAGCTATGGCCAT
CAGGACGGAAATTGGAGCTACAATAAGATGCACGCTATGGCCATCAGGAC
GGAAATTGGAGCTACAATAAGATGCACGATAACGTGGAGTATGGATTCGA
CCCTCACGATGACAGTGACTACCTCATCATTCATGGAAACGACGTCTGGG
GCAATGATAACGTGGAGTATGGATTCGACCCTCACGATGACAGTGACTAC
CTCATCATTCATGGAAACGACGTCTGGGGCAATGGTAACCACGGCATAAT
CGCTTCTAAACGTTGCGATCATGTGCAAATAACGGACAATCACGTTTATG
ACGGATTCAACACGGGGATTTTCTTGCACCGTAGCTCTGATTTTGCTATT
GTGTCTGGCAATCATGTCCATGACAACGGGGATGCTGGCTTGGCGGTGCT
TGAGTCTTTCTACTTGAATGTGAAGAACAACGTCTTCAAAAACAATCGCT
ACGGGATACGCTTTTCCGTGGGCGCGGGGTACAACTGGGTAACCACGGCA
TAATCGCTTCTAAACGTTGCGATCATGTGCAAATAACGGACAATCACGTT
TATGACGGATTCAACACGGGGATTTTCTTGCACCGTAGCTCTGATTTTGC
TATTGTGTCTGGCAATCATGTCCATGACAACGGGGATGCTGGCTTGGCGG
TGCTTGAGTCTTTCTACTTGAATGTGAAGAACAACGTCTTCAAAAACAAT
CGCTACGGGATACGCTTTTCCGTGGGCGCGGGGTACAACTGGATCCATGA
CAACATCGTGGACAGCTCAACCAGATACAACATTTTCACATATCCATGAC
AACATCGTGGACAGCTCAACCAGATACAACATTTTCACATACCTTGGGTC
TGATCCGCCGGATGTGGAGGGGACTAGCGGGCTTCCTATTGGCAACGTTT
TCTGACCTTGGGTCTGATCCGCCGGATGTGGAGGGGACTAGCGGGCTTCC
TATTGGCAACGTTTTCTGGAGGAACTACATATCGGGCACCCGGTATGACA
CCATCAAACTCAAGCAGGCTGAATCAAGTGTGATCGTTAATAACCGCATC
CGAGGGGCATCAACAGTATCGAGGAACTACATATCGGGCACCCGGTATGA
CACCATCAAACTCAAGCAGGCTGAATCAAGTGTGATCGTTAATAACCGCA
TCCGAGGGGCATCAACAGTATCGTTTGACGGCAGTAGTGATACGATGTAC
CGAGACAACGAGGAAGAGACAGGCATGGAGGGTGTCGCCAAAGGTTCCGC
CTGCTTTTCTGACGACTCAAGTTTGACTCCCAAGTGCTGAGTTTGACGGC
AGTAGTGATACGATGTACCGAGACAACGAGGAAGAGACAGGCATGGAGGG
TGTCGCCAAAGGTTCCGCCTGCTTTTCTGACGACTCAAGTTTGACTCCCA
AGTGCTGA
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