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Homology
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A6H5KJL4_9PHAE (Uncharacterized protein n=2 Tax=Ectocarpus TaxID=2879 RepID=A0A6H5KJL4_9PHAE) HSP 1 Score: 223 bits (568), Expect = 6.220e-61 Identity = 120/232 (51.72%), Postives = 168/232 (72.41%), Query Frame = 3
Query: 2886 VSDADFEDDADRDCTIQMARETLEALQQGVSREGVFSSNEEVEDVNTSMLPMLGADYYLGSLLLKLPFTSPETRLQMLENAEAFLCKYLNACEQFCLLEDGDRHAWHSMLKDGGGSTTTRGLAVGRDQKIERFRRQKRTRQRMKEIEDELTSGEVKDDLDDSEDDGIRREKALLVLSSLAIDALDELSGLSKETEMLRHMVEAKEHAHPPWEKQGIATLEDKQAAYRANDLE 3581
VS+ADF+ D DRD T A+ LE+LQ GV+REGVFS+NEEV ++ T +LP+L D+YLGSL++KLPFT+P+ RL++LE AEA L KYL+ CE+ L + D AW +M K+ S + A+ R+QKIERFRRQ+RT+Q+MKEIE+EL E KD D+ E DG++RE++LL+L+ LA +ALD +SG+SKETEML+H+V+A+E + Q D+ ++ R+N LE
Sbjct: 23 VSNADFDGDEDRDYTTARAKAALESLQMGVAREGVFSANEEVGEIATPVLPLLATDFYLGSLMIKLPFTNPQIRLKVLEQAEALLFKYLDTCERLQLFDAADLQAWQAMRKEAERSMSGDRQAITREQKIERFRRQQRTQQKMKEIEEELLRAEGKDCEDEGEGDGMKRERSLLLLAGLASEALDGVSGMSKETEMLKHLVKAREQDGAGPDGQHARARRDEDSSIRSNGLE 254
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A6H5KUY5_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KUY5_9PHAE) HSP 1 Score: 124 bits (311), Expect = 9.610e-26 Identity = 117/384 (30.47%), Postives = 171/384 (44.53%), Query Frame = 2
Query: 833 EMEAILGCHKLNGRVTEGVTDCEPSMVTASRRL-TKKKVLTHIGCISHRVVHHVAILRRSG*RRR*LRLVRWLPATRNPARRPIGSRSKCYKFKGI---TVWKVMQDVETRWSSTHDCIVRAVDLQSAISLQEKGDGIAALLSSVDWCVLK-------------------Q*VTGSLIVLFMQDLRQGMESYVNLQQPKPMATEDEVNVRA-------ILVPCVAALIAVHVNRGGNGTNVVMYREGPRRQPQGFRLEHSCLLLSTHDARVAWGPERQEGDRV-QIVVQRAAAVAVQ*RMTDDRTVKSTPSLRVLSVASTSFAQANGGSAKRF-CDRFVAASKAQAGKGPPGRAAAYLSF--EHFEHLADLEIDK*REMNGISM 1882
E+ +++ H L GRVT VTDCEPSMV A R L L HIGC +HR+ + + + L + A +R + F GI + V+QDVETRW S+ I R + L AI L E D IA +LS DW VL+ + VTGS+ V + +LR G+E+ + + D + A ++P AL +NR G+G++++ YREG RRQPQGF+L+ C A+ +G + E V + V +A +A + + + D T S + V + A G+ KR F AA+ A AG L E + DLE+ + GIS+
Sbjct: 128 EITSMIERHGLTGRVTACVTDCEPSMVKAGRLLEVGGSNLEHIGCSNHRMESTTSSVFNG----KSLGALAKARAVVGRYKRSSQMSGRLAVFIGILKLSPLSVLQDVETRWWSSWAMIERLLYLMKAIKLHESTDNIAPVLSETDWEVLRLIEPILRPFMQAQKDLEGAKYVTGSMTVPKIGELRNGLEAAI-----ADLRATDRFGISASTREAMEAVLPDAEALWEDFLNRWGDGSSILEYREGKRRQPQGFKLQQVCATAVDPRAKHLYGIRQAEHASVWRAVATKAVDIAAE-KFSSDNTATSGSAPAAQPVGTPPVAPGGQGAPKRARLSAFEAAAAAHAGAAASSAGGQTLDEKREQLASVVDLEVASFQTTPGISI 501
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: D8LCS5_ECTSI (Dimer_Tnp_hAT domain-containing protein n=2 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LCS5_ECTSI) HSP 1 Score: 122 bits (305), Expect = 6.370e-25 Identity = 97/295 (32.88%), Postives = 140/295 (47.46%), Query Frame = 2
Query: 809 HDRRQTGEEMEAILGC----HKLNGRVTEGVTDCEPSMVTASRRL-TKKKVLTHIGCISHRVVHHVAILRRSG*RRR*LRLVRWLPATRNPARRPIGSRSKCYKFKGITVWKVMQDVETRWSSTHDCIVRAVDLQSAISLQEKGDGIAALLSSVDWCVLK-------------------Q*VTGSLIVLFMQDLRQGMESYVNLQQPKPMATEDEVNVRAI--LVPCVAALIAVHVNRGGNGTNVVMYREGPRRQPQGFRLEHSCLLLSTHDARVAWGPERQEGDRVQIVVQRAA 1615
H TGE++ A++ H L GRV VTDCEPSM+ A R L ++HIGC +HR+ + + +G L L R L + + + + VMQDVETRW ST +VR + L AI L E D + LLS DW VL+ Q VTGS+ + M +LR+G+E+ + + E +A+ + P AL+A NR G+G+N++ YREG RRQPQGF+ + A+ +G +++E V V AA
Sbjct: 80 HTGTTTGEDLAALVAGMVERHDLTGRVIACVTDCEPSMIKAGRLLEVDGSTISHIGCSNHRMESTTSSVF-NGRSLGALGLARTLVGRYKKSSQMAARLVQLCGILQMEPLSVMQDVETRWWSTWAMVVRLLYLMKAIKLHESMDEVHPLLSDTDWEVLRLIEPILRPFMKAQKDLEGAQYVTGSMTIGKMAELREGLEAAITDLKAVAQQGLKETTQKAMEAVRPDAEALMADFTNRWGDGSNILEYREGKRRQPQGFKRKQVYATALDPRAKHLYGIQQREHAGVWRAVASAA 373
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A6H5JHP9_9PHAE (Autophagy protein 5 n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JHP9_9PHAE) HSP 1 Score: 102 bits (253), Expect = 3.810e-18 Identity = 88/312 (28.21%), Postives = 135/312 (43.27%), Query Frame = 2
Query: 788 LCEVRGVHDRRQTGEEM----EAILGCHKLNGRVTEGVTDCEPSMVTASRRLTKKKVLTHIGCISHRVVHHVAILRRSG*RRR*LRLVRWLPATRNPARRPIGSRSKCYKFKGITVWKVMQDVETRWSSTHDCIVRAVDLQSAISLQEKGDGIAALLSSVDWCVLK-------------------Q*VTGSLIVLFMQDLRQGMESYVNLQQPKPMATEDEV-NVRAILVPCVAALIAVHVNRGGNGTNVVMYREGPRRQPQGFRLEHSCLLLSTHDARVAWGPERQEGDRV-QIVVQRAAAVAVQ*RMTDD 1648
LC H R GE++ +A++ + L GR TDCE SMV A R L + + +TH+GC HR+ + + L L R + + + + + V+QDVETRW ST+ I R + L+ I+ E D LL DW VL+ + VT L+ ++ DL+ G++ V Q E V + ++ C AL R G+ T+V++Y EGPRRQP+GF+ E ++ +G E E V A VA++ + T+D
Sbjct: 38 LCLECKKHGWRTAGEDLVEAVKAMIARNGLTGRTVAITTDCELSMVKAGRLLEENEGVTHLGCFCHRLESITSQAFGGPGVSKALALARGVVTRYTISSQASDRLEQVCDIVQVERKNVVQDVETRWWSTYVSICRLISLRRPITEHEIIDSTPPLLKEKDWEVLQLVESLLKPFMTAQKHLEASKEVTVRLVSPYIADLQDGLDEAVERLQAHSCPAESIVAEAKKDVILCAQALQTDLSRRWGDRTDVLVYTEGPRRQPRGFKKEQVLATALGPRSKSLYGIEETEHSDVWDAGANEAVKVAIEAKATED 349
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A6H5KVI1_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5KVI1_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.910e-17 Identity = 86/312 (27.56%), Postives = 132/312 (42.31%), Query Frame = 2
Query: 788 LCEVRGVHDRRQTGEEM----EAILGCHKLNGRVTEGVTDCEPSMVTASRRLTKKKVLTHIGCISHRVVHHVAILRRSG*RRR*LRLVRWLPATRNPARRPIGSRSKCYKFKGITVWKVMQDVETRWSSTHDCIVRAVDLQSAISLQEKGDGIAALLSSVDWCVLK-------------------Q*VTGSLIVLFMQDLRQGMESYVNLQQPKPMATEDEV-NVRAILVPCVAALIAVHVNRGGNGTNVVMYREGPRRQPQGFRLEHSCLLLSTHDARVAWGPERQEGDRV-QIVVQRAAAVAVQ*RMTDD 1648
LC H R TGE++ +A++ + L GR TDCEP MV A R L + + ++H+GC HR + + L L R + + + + + KV+QDVETRW ST I D I LL+ DW VL+ + VT SL+ ++ DLR ++ + Q E V + ++ C AL R +GT+V++Y EGPRRQP+GF+ + ++ +G E E V + V A VA++ + T+D
Sbjct: 26 LCLEYKKHGGRTTGEDLVEAVKAMIARNGLTGRTVATTTDCEPFMVKAGRLLEENEGVSHLGCFCHRFESITSQAFGGPGVSKALALPRGVVTRYTMSSQASNRLEQMCDIVQVERKKVVQDVETRWWSTPREI----------------DSIPPLLNEKDWEVLQLVEPLLHPFMTAQKHLEASKGVTVSLVTAYIADLRDELDEAIERLQAYSCPAESIVAEAKKDILRCAPALQTDLSRRWRDGTDVLVYTEGPRRQPRGFKKKQVLATALDPRSKSLYGIEETEHSDVWEAVANEAVKVAIEAKATED 321
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A835ZK81_9STRA (TAP42-like protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835ZK81_9STRA) HSP 1 Score: 93.6 bits (231), Expect = 1.870e-16 Identity = 50/114 (43.86%), Postives = 64/114 (56.14%), Query Frame = 3
Query: 2886 VSDADFEDDADRDCTIQMARETLEALQQGVSREGVFSSNEEVEDVNTSMLPMLGADYYLGSLLLKLPFTSPETRLQMLENAEAFLCKYLNACEQFCLLEDGDRHAWHSMLKDGG 3227
+SD E D R+ L ALQ +SREG+FS NE +ED+ T LP+L +Y LGSL LKLPFT PE R + LE A++ L YL AC + +L D D W + G
Sbjct: 38 LSDGTVEQDR-REAVSARCDTALRALQMQISREGIFSPNETLEDIETDDLPLLATEYMLGSLQLKLPFTGPEARRRALERADSLLSHYLAACARLSILADADLKTWRRIEAGDG 150
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A6H5L7Y8_9PHAE (Uncharacterized protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5L7Y8_9PHAE) HSP 1 Score: 96.3 bits (238), Expect = 2.000e-16 Identity = 78/272 (28.68%), Postives = 123/272 (45.22%), Query Frame = 2
Query: 836 MEAILGCHKLNGRVTEGVTDCEPSMVTASRRLT-KKKVLTHIGCISHRVVHHVAILRRSG*RRR*LRLVRWLPATRNPARRPIGSRSKCY--KFKGITVWKVMQDVETRWSSTHDCIVRAVDLQSAISLQEKGDGIAALLSSVDWCVLKQ*VTGSLIVLFMQDLRQGMESYVNLQQPKPMATEDEVNVR-AILVPCVAALIAVHVNRGGNGTNVVMYREGPRRQPQGFRLEHSCLLLSTHDARVAWGPERQE-GDRVQIVVQRAAAVAVQ*R 1636
++A + H L G+VT TDCEPSMV R L V T IGC ++R+ +I+ ++ + L R L TR P R K + + G+ +V+QDV VTGSL+V F+ DLR +E ++ P ++ VN A ++PC+ AL +++R G+G N+++Y+EGPRRQP GF+ H ++ +G + E D ++V + A +AV+ R
Sbjct: 93 IKATVAKHGLTGKVTAVTTDCEPSMVKMGRLLAGDATVSTQIGCCNYRLESTSSIVFNGPRVKKVMVLARGL-VTRYPTSSQAADRLKQFVKTYLGVDNKRVIQDV---------------------------------------------VTGSLVVPFIYDLRNSLEDAIDDLVELPPDSDANVNTAWAAVMPCIKALRDDYIDRWGDGHNILIYKEGPRRQPGGFKPVHVLATALDPRTKIPYGVDEDEKADVWKLVQEEAVKIAVETR 318
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A068RHZ9_9FUNG (Tor signaling pathway regulator n=2 Tax=Lichtheimia TaxID=688353 RepID=A0A068RHZ9_9FUNG) HSP 1 Score: 83.2 bits (204), Expect = 3.930e-13 Identity = 64/195 (32.82%), Postives = 101/195 (51.79%), Query Frame = 3
Query: 2910 DADRDCTIQMARETLEALQQGVSREGVFSSNEEVEDVNTSMLPMLGADYYLGSLLLKLPFTSPETRLQMLENAEAFLCKYLNACEQFCLLEDGDRHAWHSMLKDGGGSTTTRGL--AVGRDQKIERFRRQKRTRQRMKEIEDELTSGEVKDDLDDSED-DGIRREKALLVLSSLAIDALDELSGLSKETEMLRHM 3485
D + + A LE V + +FSSNE ++D+N + + L YLG L LK+ + ++R +LE A+ Y+NACE+ LL D A+ + D ST+ R L A R QKIE F+R+K T QR++E+ + L +D++ED D I R+ L ++ + AL L + +E M++ M
Sbjct: 31 DPEYQAKVHDALSRLERAHDLVHQLSIFSSNELIDDMNPNDMRFLLIPVYLGDLTLKVTDRN-QSRRHILETAKNHFNTYMNACEEHQLLSGADLDAYKRSV-DNSSSTSNRSLPPAQQRQQKIEMFKREKATEQRIRELRERLN-------VDENEDKDDIERDWVLALIQLHILKALQHLHSIDQELVMVKEM 216
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A7S0UMY0_9CHLO (Hypothetical protein n=1 Tax=Polytomella parva TaxID=51329 RepID=A0A7S0UMY0_9CHLO) HSP 1 Score: 72.4 bits (176), Expect = 1.400e-9 Identity = 57/190 (30.00%), Postives = 91/190 (47.89%), Query Frame = 3
Query: 2919 RDCTIQMARETLEALQQGVSREGVFSSNEEVEDVNTSMLPMLGADYYLGSLLLKLPFTSPETRLQMLENAEAFLCKYLNACEQFCLLEDGDRHAWHSMLKDGGGSTTTRGLAVG--RDQKIERFRRQKRTRQRMKEIEDELTSGEVKDDLDD--SEDDGIRREKALLVLSSLAIDALDELSGLSKETEML 3476
RD ++ + A V G+FSSNE+ +D+ T L L A +Y L + + P+ RL +E A +L+ Q+ +L + + + + GG RGL G R KIE+F+R K QR++ I D+ + + DD S DD + RE LL L + ++ A ++ L E +ML
Sbjct: 32 RDDALKDVEKLFNAFNNAVDARGIFSSNEDQDDIATGDLKYLFASFYRAELYSQASSSDPKIRLPYIEAALRSYDTFLSRGNQYSVLGSVGKSTFKAQSEGGG-----RGLDAGAKRALKIEKFKRDKAINQRIQVIHDKKKAQKSADDXXXXXSGDDNLERELWLLKLEAASLKAFEQQGSLQMEKDML 216
BLAST of mRNA_H-paniculata_contig3077.8332.1 vs. uniprot
Match: A0A8H7UIU7_MORIS (Uncharacterized protein n=1 Tax=Mortierella isabellina TaxID=91625 RepID=A0A8H7UIU7_MORIS) HSP 1 Score: 71.2 bits (173), Expect = 3.040e-9 Identity = 57/181 (31.49%), Postives = 99/181 (54.70%), Query Frame = 3
Query: 2973 VSREGVFSSNEEVEDVNTSMLPMLGADYYLGSLLLKLPFTSPETRLQMLENAEAFLCKYLNACEQFCLLEDGDRHAWHSMLKDGGGSTTTRGL--AVGRDQKIERFRRQKRTRQRMKEIEDELT-SGEVKDDLDDSEDDGIRREKALLVLSSLAIDALDELSGLSKETEMLRHMVEAKEHA 3506
V R G+FS NE ++D+N + L L + YLGSL+L+ + R +LE A+ +L ++++ C+ ++ D +LK S + L A R+QKIER+RR+K T ++KE+++ L SG+ + D ED I R+ + ++ + AL+ L + +E M+ M + +E A
Sbjct: 50 VQRLGIFSENEILDDINANDLRFLLVNAYLGSLVLQ---QTGGNRKDILERAKTYLLEFMHTCDVHQIISQEDLR----ILKRFQDSDSAPRLDAATSREQKIERYRREKETDLKVKELQNLLEKSGDKAETNVDVED--IERDLIMSLIQYQILKALEHLQSIDQELVMVLEMEKMRERA 221
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Taxonomic scope | Eukaryota |
| Seed ortholog score | 223.0 |
| Seed ortholog evalue | 1.5e-55 |
| Seed eggNOG ortholog | 2880.D7FN43 |
| Preferred name | IGBP1 |
| KEGG ko | ko:K17606 |
| KEGG Pathway | ko04136,ko04138,ko04140,map04136,map04138,map04140 |
| Hectar predicted targeting category | other localisation |
| GOs | GO:0000122,GO:0000159,GO:0000226,GO:0000278,GO:0001101,GO:0001558,GO:0001932,GO:0001933,GO:0002009,GO:0002165,GO:0003674,GO:0004857,GO:0004864,GO:0005488,GO:0005515,GO:0005575,GO:0005622,GO:0005623,GO:0005737,GO:0005829,GO:0005856,GO:0005874,GO:0006355,GO:0006356,GO:0006357,GO:0006808,GO:0006950,GO:0006996,GO:0007010,GO:0007017,GO:0007049,GO:0007051,GO:0007052,GO:0007154,GO:0007165,GO:0007275,GO:0007444,GO:0007472,GO:0007552,GO:0007560,GO:0008104,GO:0008150,GO:0008287,GO:0009266,GO:0009409,GO:0009628,GO:0009653,GO:0009719,GO:0009725,GO:0009737,GO:0009791,GO:0009886,GO:0009887,GO:0009888,GO:0009889,GO:0009890,GO:0009891,GO:0009892,GO:0009893,GO:0009966,GO:0009967,GO:0009968,GO:0009987,GO:0010029,GO:0010033,GO:0010187,GO:0010466,GO:0010468,GO:0010556,GO:0010557,GO:0010558,GO:0010562,GO:0010563,GO:0010604,GO:0010605,GO:0010628,GO:0010629,GO:0010646,GO:0010647,GO:0010648,GO:0010921,GO:0010923,GO:0010941,GO:0010951,GO:0015630,GO:0016020,GO:0016043,GO:0019208,GO:0019212,GO:0019219,GO:0019220,GO:0019222,GO:0019888,GO:0019898,GO:0019899,GO:0019900,GO:0019901,GO:0019902,GO:0019903,GO:0019904,GO:0022402,GO:0023051,GO:0023052,GO:0023056,GO:0023057,GO:0030162,GO:0030234,GO:0030307,GO:0031323,GO:0031324,GO:0031325,GO:0031326,GO:0031327,GO:0031328,GO:0031399,GO:0031400,GO:0031434,GO:0031929,GO:0032006,GO:0032008,GO:0032268,GO:0032269,GO:0032501,GO:0032502,GO:0032515,GO:0032872,GO:0032873,GO:0032879,GO:0032886,GO:0032991,GO:0033036,GO:0033993,GO:0034097,GO:0034612,GO:0034613,GO:0035220,GO:0035239,GO:0035295,GO:0035303,GO:0035304,GO:0035305,GO:0035306,GO:0035308,GO:0035556,GO:0040008,GO:0042221,GO:0042325,GO:0042326,GO:0042981,GO:0043066,GO:0043067,GO:0043069,GO:0043086,GO:0043154,GO:0043226,GO:0043228,GO:0043229,GO:0043232,GO:0043281,GO:0043408,GO:0043409,GO:0043666,GO:0044092,GO:0044422,GO:0044424,GO:0044425,GO:0044430,GO:0044444,GO:0044446,GO:0044464,GO:0044877,GO:0045861,GO:0045892,GO:0045893,GO:0045927,GO:0045934,GO:0045935,GO:0045936,GO:0045937,GO:0045943,GO:0045944,GO:0048513,GO:0048518,GO:0048519,GO:0048522,GO:0048523,GO:0048563,GO:0048569,GO:0048580,GO:0048581,GO:0048583,GO:0048584,GO:0048585,GO:0048707,GO:0048729,GO:0048731,GO:0048856,GO:0050789,GO:0050790,GO:0050793,GO:0050794,GO:0050896,GO:0051093,GO:0051128,GO:0051171,GO:0051172,GO:0051173,GO:0051174,GO:0051179,GO:0051239,GO:0051241,GO:0051246,GO:0051248,GO:0051252,GO:0051253,GO:0051254,GO:0051270,GO:0051336,GO:0051346,GO:0051641,GO:0051716,GO:0051721,GO:0052547,GO:0052548,GO:0060255,GO:0060429,GO:0060548,GO:0060562,GO:0060632,GO:0065007,GO:0065009,GO:0070302,GO:0070303,GO:0070555,GO:0070727,GO:0071840,GO:0072657,GO:0080090,GO:0080134,GO:0080135,GO:0097305,GO:0098772,GO:0099080,GO:0099081,GO:0099512,GO:0099513,GO:1900140,GO:1901700,GO:1902494,GO:1902531,GO:1902532,GO:1902533,GO:1902679,GO:1902680,GO:1902850,GO:1903047,GO:1903293,GO:1903361,GO:1903506,GO:1903507,GO:1903508,GO:1990778,GO:2000026,GO:2000112,GO:2000113,GO:2000116,GO:2000117,GO:2001141,GO:2001233,GO:2001234 |
| EggNOG free text desc. | Immunoglobulin-binding protein |
| EggNOG OGs | KOG2830@1,KOG2830@2759 |
| Ec32 ortholog description | TAP42-like protein |
| Ec32 ortholog | Ec-06_008330.1 |
| COG Functional cat. | P |
| Best tax level | Eukaryota |
| Best eggNOG OG | NA|NA|NA |
| BRITE | ko00000,ko00001,ko01009 |
| Exons | 10 |
| Model size | 3583 |
| Cds size | 711 |
| Stop | 0 |
| Start | 1 |
Relationships
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig3077.8332.1 >prot_H-paniculata_contig3077.8332.1 ID=prot_H-paniculata_contig3077.8332.1|Name=mRNA_H-paniculata_contig3077.8332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=237bp
MSNRAVSDADFEDDADRDCTIQMARETLEALQQGVSREGVFSSNEEVEDV
NTSMLPMLGADYYLGSLLLKLPFTSPETRLQMLENAEAFLCKYLNACEQF
CLLEDGDRHAWHSMLKDGGGSTTTRGLAVGRDQKIERFRRQKRTRQRMKE
IEDELTSGEVKDDLDDSEDDGIRREKALLVLSSLAIDALDELSGLSKETE
MLRHMVEAKEHAHPPWEKQGIATLEDKQAAYRANDLE back to topmRNA from alignment at H-paniculata_contig3077:1746..13951- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig3077.8332.1 ID=mRNA_H-paniculata_contig3077.8332.1|Name=mRNA_H-paniculata_contig3077.8332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=12206bp|location=Sequence derived from alignment at H-paniculata_contig3077:1746..13951- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CACCGATCTCTCCAGACTTACAGTTTCCTCTAGACTCGTCTGCACCCGCT
GGTTCATCTGGCTAGGCTGGCAGTCTCACATATACTGCGTTTGCCACACC
GCAGCTTGAATCTGCGTTGACGCGTGCGAACACTGCAGCTGCCAAACATT
ATCGGGTGAAGAACGAGTCACGACGAAGCAAGTCAGCGGGCGCGTCTCAT
CCTGTGTGGAAGTTTTACTCTTGCCACGTCAACAGTTTGTTCAGGAAGCT
TGCAATTTGTCTTCTTTGCGGCGAAGCAAAATACTACAAGCCTGCAGAAG
TGAACATCAAAGACGGCTCTCCAACTAACCTCAACACCCAGCTTCCCAGG
CACAAGGAGGCGCATCGCGAAGTGAACGCTGCGAAAGCGGGCAAGAACAA
TGGTGCGGCTCCGGTGATGAAGTCGTCCGATAACGAAGGCTCGATTCTGC
GCTTTCTTAAGCCTGAAATCGGGGATTGGAACGCCGCTCTCATTCGGTTC
ATCGGCATGAGCAACCAGCCTATCTCGGTGAGTCCACAATGTTGTATTTT
TTTTTATTGTACAATTGCGTACTCCTCTGTTACATGTTATTAGCTACCAC
TATCACATTTTGTATCATGGTGGTAGTACAGACAGTAGCAACGTATTGCG
CTTCTGTCTTTCTCTCTGCACTGCTGACTGTGTTGTAGTGTTGTAAGTAT
CATAAACAAACACTGGGTACCAAGCTTTTGTATGCTGTATGTTTTTGACA
CCACCTCCATCTCTACTGCTACAGCTATAGTACAAAGTACAGCCAGAACT
GACTGCCTGAACAGCTACTGAGACTGACAACACTAGAAGCCGTCATTTTG
CCACTAAATATTTTGAACACTTTTGCTCACTGGCACGATGTACAGGGAAA
CTGACTGCCTTTACTGTTACTGACCGTAATTAAGCACGGGATAAAACTAA
GCGTTTTTAAGTGCTATATTATATTGCTCACGACTACCTGTTCATAAGCG
TACAGCAGTACAAGAGCTTCAATTCAAATAATTCAAGTTACGTCGTGCGG
AGCAGCACTACTATACACCTCGCGTCTGTGATTCGCTGAAGTTGAAGTTC
CCTGTGAAGCCGATACCAGGTGCTCGGTATCTGCGGTAGCAGCATTACTG
TACGCCTCGCGTTTGTGATCTGCTGGAATTGAAGTGCCCTGTGAAGCCGA
TACCGGGTGCTCGGTGTCTGCGGTAGCTAGGGTGTTTCACTTTATGTGTT
GTTATATATTACGCTTGCTTCCACAAGCTCATCTGTGGCTATTGTTTTTT
TCTATAGAGCTCTACTATTAAACCCGTGATATGATAGTTGTTGTGCTTGC
GTTATTAGTTGCCTTTTGCTTCTTTATGTTCCCAGGCACATGTATGTATT
ACGACTTGACAATATCGAGGACTTCCGTTAAATGTCTGCATGTGTGGTTT
GTTTCACGTATTCTCGTAACACGCAACCAATTGCGTTTTCGTAATTTTTG
TCACTACTGTCAGCCAATCCTTCCGTTTGGTGTTGTGCACCTCACTTCGC
GTTTTGTTTGCTCTTCAGATTGTGGAGAACAAGCACTTCCAAGCAATGGT
GCATATCACGAAGAAGGGCATCAAGATACTAACTGGACGTGCCCTTCTCG
CGGATATGGAGGCGATTCGGGACGATCTGCAGGTCTCAATCGCCGTCGCC
GTAATGCTGAAGGACCAGTATGTGTGCATGGCCGCAGACGGCTGGACGTC
CGACGCCAACGATACGTCCGTGTCCTTGACGGTCGTCAGTATAAATGGGG
ACTGGGAGGTCGTGAAACTCGTGCTGAACTGTGCGAAGTCCGAGGGGTCC
ACGACAGGAGACAGACGGGCGAAGAAATGGAGGCCATACTAGGCTGCCAC
AAGCTCAATGGGCGCGTGACGGAAGGTGTCACGGACTGTGAGCCGTCTAT
GGTGACTGCCAGTCGACGGCTCACGAAAAAAAAGGTGTTGACGCACATCG
GGTGCATCAGCCATCGTGTAGTGCACCACGTGGCTATTCTTCGACGGTCT
GGGTAAAGAAGACGATGACTCCGACTCGTGCGTTGGTTACCCGCTACACG
AAATCCAGCCAGGCGGCCGATCGGCTCGAGGAGTAAGTGCTACAAATTTA
AGGGCATAACAGTGTGGAAGGTGATGCAGGACGTGGAGACGCGGTGGTCG
TCCACGCACGACTGCATTGTCCGCGCCGTGGACCTGCAGTCAGCAATCAG
TCTGCAAGAGAAAGGTGACGGCATCGCCGCTCTGCTGTCGTCCGTGGACT
GGTGCGTCTTGAAGCAGTGAGTGACGGGAAGCTTGATCGTGCTATTTATG
CAAGACCTTCGCCAGGGCATGGAATCATACGTAAATTTGCAGCAACCCAA
GCCAATGGCGACAGAAGACGAGGTGAACGTGCGTGCTATTCTCGTGCCCT
GCGTGGCGGCCCTGATCGCGGTCCACGTCAACCGCGGGGGCAACGGGACC
AACGTCGTGATGTACAGGGAGGGACCGCGGCGACAGCCCCAGGGATTTCG
CCTGGAGCACTCATGCCTACTGCTCTCGACCCACGATGCAAGAGTTGCAT
GGGGTCCCGAACGACAAGAAGGAGACCGTGTGCAGATCGTGGTGCAGCGG
GCTGCAGCAGTCGCCGTGCAATAGCGGATGACCGACGACCGCACAGTGAA
ATCGACCCCGTCGCTAAGGGTGCTATCGGTGGCATCGACCTCATTCGCGC
AAGCAAATGGCGGCTCTGCCAAGCGGTTTTGCGACAGGTTCGTGGCGGCT
TCCAAGGCGCAGGCGGGCAAGGGTCCACCGGGACGCGCCGCGGCGTATCT
ATCGTTCGAACACTTCGAGCACCTGGCGGACCTGGAGATCGACAAGTAAC
GGGAGATGAACGGCATCAGCATGGAAGACGAGCACAAGGTACGACGGTCT
ATCCGTTGCCTCTCAAATGATAGCGGCAAAATGCCTGCAATCTGCTTCTC
CGGGTAGTGCTTGCCAGGCGTGTGCTCGCCATCCCGGCTACACAAGCTCA
ATCGGAACGCGCGTTCTCGGCCGCCGGTCTAATTGCTACCAAGTTGTGCA
ACAGGATGGCGCCGGACAATCTCGATCTGCTGGTAACGCTGCGTAACATG
TGGCCAGTGGTGAAGTGGTGGCGATCAAACCCGTGCGAGATTCTGTGTCC
TTGATTGTGTATCGTATGTGGTTGCGTGGTTGCCTAGTTTTACTCGTCGG
TTACAGCAAATAGTTCGGTTTCCATGTTTGTCGTTTCACATCCGCAAGCA
TTCGTTAGTCGTACGTTTGTTGCGCACCCGGGTGCGCTCGCGACTTGTGT
TTTTTTAGCGACCTTGGTGGATTAAGAGTCCGGTCTTCGCAACTTTCTGC
CACAGGTGTTTCATTTGCGTTCAGTCTTAGCGGGCTTCAACACTGTACAC
ATTTTTTTCCTGGTTGATGATTAGAGCAAATAATATCCCCTCTTGTTATA
CAGAATACCGAGCTGGGTCTGCGTGGGCACCATGGCTCAAAACAAGCGCA
CTACCAGAGATTATCCGCGAGATGCTCCAAAGCGCAAAAAAAAACCCAAG
GGCAGGCTTGACACTACAAACTTGGTGAAGATGGTGGCCCCCAAGACGGA
AACAGTTGAAGTGAGGGAGGCCGCATGCGACGATTATGCTGAAGCACGCA
ACGCGGCAGCACATGAGGCAACCAGAGTTGAGGCAGAGACTGTTGCCATA
GCTCGGGCACAGCTTGACAAAGATCTGACAGACTTTGCCAGAGAAAATGC
CAGATTTGAGGCAGAGACTGCCAAGCATATGACAGTGCTTACTACCGTGG
CTGAGCGCGAGTCGAGAGTGGAGACACATGAGAAGAAACTCAGAGAACAA
GAGCGTGTTCGTATCCATACAGAGGTGCAGCAGCGCGGGATCACCTCGCT
CGTCGGCAGGGAGCGTTGTTGGACGAGTCGCAGTCTCGGGACATCGTATT
GGTTTAGTTGAATTTCATCCAGTCGGGCATGGACCGAGACCCAGCCGTCA
AGGAGGTTGCAAGGGTGATGCGCGTCGGCCCGAAGAAAGTGTATGAGGTA
AGAATTGCGGTATAGTGAATATAGGATACATTGGAGTGGTGCTGTACAGA
CAGTACTATATAGTCCGTGTTGTACAGACATGTGGGTGTACTCTCTGATG
AGACAGTATACTGTATTGCCGGTACTGTGTGTTGTACTGTCTCCTGTCTG
TACAGACAACACGGTACATTGTACTGTCTGTTGCCTTTTGCGTAGTACTG
TCTGTTGTCTCTTGTTGTATATTGTTTTGCTGCTATATTCGAGATCTTGA
AAAATGTATCGGCGCATCCTCCGTGTTTACCATTTCACCCTGTCTGTCGG
TGAAGAATGTTGGCTGTACTTCTGTATGTAGGCCGAAAAATGCTGTTGAT
GTTGCCCTCCCTGGGAAGTGATAGTGCTGGCTATTGATACTGATCATACC
TCCAAAGTGCTGGCTGTTTTAAACTCTCCATGGGTTTTCTGTATCTTGAT
ATGCTGAAGATTCCGTGCACTCTGCAAAGCGAGAATGGTGCTGTTTTTTG
TTGACCTTACCTCAAACGGACTGTCCTAGTTGTCCTGTCAAAGTGTATAC
TGTACTCCCTTATCTTGAAAATTGCCCATGCTTGTCATAAAATAGAGTGA
GAATGATAAGCATTTTTCAACTTGTTGAATGTATTGTATGCTGCACCTGT
GTTTTGGGATAATCATAATTGCACTTCCCCTTGCGCGGTAAACGAATTCG
CACTTGGTATGAGGACAAGAAGCTCATAACGACGTCAGAGAAGAAACGAG
GCGCGACGAAAGGAGCGGACGGGTGGAAGATGCCACCGACCCCCAAGTAG
CCACGCTTTTGGCCTTCATCGGCGGCAAGCACAAGGACGGGCAGCAAGTT
TTCTGGCGGACGGTGCGCGAATGGATCAAGGCCGAGTGTCATCATGAGAT
GTCAAACCGCGCGGTAGGAGGGTTGTTGTGTAGGCTTGACTTTAGACGCC
GTCGAGGAAGGATTGAAATCCTCCCTCTCATCAAACGAGGAAAGCATGTA
TTCGCAGGTTTCTCGTAGAGTTTTGTGGTGCTCTTTCTGAAGAAAACGCA
GGTGATGCAGTGATCGTGCACATCGATGAGTGTTTCTACTACCAACTGCA
TGGTTCTGCTTACTCGTACTTTTTCACGGATGAAGATGGAGTAGTGCAAG
ATGGGACGGGTTGTACTGCAGGCAAGGGCTTGTGAATGATCATGCTTCAC
GCAATCACCAAACACGGGCCGTTAACCGCTATTAATGCGAACGGTTTCCC
TATCCCAGAGAATTTTTTCAAACCAAAAGCTAACGGCAAAGGTAAGAAGG
GCAAGAGGGCGGTGGTTACAAAGAATACCGCAGGGATGCTTTGGCAGGCC
AAAAGTTCCACAGGCGATTACCACGATGCTATGACTGAGGGCATGTTCAT
GGAGTGGCTCAAGAATTGCCTTGCACCGGCTTTCGAAGCTGCTTTCGGAA
AGAACAAGATGATTCTTGTTCAACGCATCATAACACTACGGGTATGACTA
GGAGGTCGGGGTGCCTTCAACTAATACCAAGATGAAAAACACAAAATTGT
TGCGTACGTACGGGGCTGGATCAATCCATGTTAAGTGTGTAGAAAAGAAT
TGTACGAGGCGGAGGGCGCGGAAGGGAGTTGTGACTTATAATTTCCAAGT
ACAGAAGACTGGAAACTTTTCCAATTCGAACTCGAACTGCGGTAATGGTG
TCAGCAGTGCCGAGGTAGCGCTGGCCACTCGGGCGTTCTTTCAGCTTAGA
TTTCGGGAAAAGCTTCTGGAGAATGTTGAGATGTTGATGCACGGTCAAGG
GTGGGATTTTATCTTGATCCCATCGTACATGCCCACTTTTCACCCGATCG
AAACTGTTCTGGCAGTACGGCAAGCAGTGTCAATTTCAACTTCAAGACTA
CCCGTAATATAGCATAGTTTATGGGGCAATTTCGGAAGGATTGGTATGGA
AATGAGACATGAGAAGAGCAGTTGGGGGGTTGGAAGGCGGCAGCCTGTAG
CAAACTCGTTTCGCACGCCGCCATGAAGGACATGAACGAGTAAGTTTGGA
AAGACAAAGTAATGAACAGTACCATGGACGCCATTGAGGTGCCGGATGAT
CAAGGCTTCAGTGCCGCCGGGAACAAGGCTATCGTTGAGGGTGATGGGGT
GATGCTCGAGGAGTCGCTTGATATCGCTGCGGAAGTTTGTGGGTATAGGA
GAGAGCGTGAACGGGGATGTGCTGGTCTAGCAGGCACAAATTGAGAGTTC
CCAGATTATGTAAGTAGCAACTTGTAACAATAGCTTTGGGGAGGGTTGAG
ATGGGTAGGGCCGAAGCCTGGGTGGGTCGGGGTGAATGTGTAGGAGTGTA
GGTGTGTCGAAGCCTGGGTGCATGCGTGCGTCCGTGGGTGGATGTTGTGT
GGGGTGGAGTAATGACTGTTCAATTGCACTGTCTTTTCGGCGACTTGTTT
CTCCATTATATCCACTCGGTCTGTCGCTTCAAAGTTCCACAACACCAGGC
GTGTCCGCGATCAACATCTTTCACCAGCGCCGGTCTAAGGTTAAAGGCGA
CAAACGCGGAAAATATGGCGTAGTGGAGCTGGTGATGTTTTGTTTCGTTT
TTTTGTCTTTGTTCGTAACCGCCCCGACCGTGCGATTTATTCAAGCCATC
TTTTGTAGAAAACCTCCAGCAGTTAGTTGGGCTGAAGTTAACGGGCGCCG
GGCTGAGGTTAACGGGGACAACCTTGGAACATATGCTGTGGCTCGACATG
AACCCTTTTGATCATTGTTTTACCTTTGTTCACCGGATCATATTGGTCGT
GCACTTCATTCAAGACATGGCTTGTGGAAGGAAGTAAAAGGCGAGCTATG
GTGGAAATTCTAAACGTTTTTCCACCAACGCCAGCCTAAGATCAAGGGCG
ACAATCCTGGAAAATGTGGCGTAGCTCGCCGTGAAGATTAAAACAATATA
TTTTCTCTTTCGGTACGTGACCGCCCCAACCGTGCGGTTCATGCCATCAT
TCATGGAAAACCTCATTAAACGGGCAAGTTACGGTGATATTTTCATTTTT
TCCCCACCAGGGCCGGCCTAAGGTTAACGGCGACAATCTTGGAAAAATGT
GGCGTACCTTGACGTGAACATTTTCGTTGTATATATTTTATTTTGTATCG
TGAGCGCATCAACCGTGTCGTTTTTCAAGCAATCATTTGCGGCATACGTG
AAGTAAATGGGCGAGCTACAGTGAAAATTTAAATATTTTTCTACCAGGAC
TGGCCTACGGTTGAGGATAATCCTGGAAAAGGTGGGGTAGCTCGACGTAA
ACATTTACAATAAATACATTTTTTCTTTTGGTATGTGACCACACCGACCG
TGCGGTTTATTCCAGCCATTGTTTGTGAAAGTGGGTCTCGCTAAAAATGT
ATATATGCCATATTGTTACCATTGAGTGTGCGCGAATGCTATTTGTGTTT
GATACACAAAATATTGAACATTATTCCACAGAAGTGCCTGTTAACGGTCC
GACACTCAAATCTTTCCAGGCATCCTTTGACTGTGTTCTTGATGTGTTAA
TGCATTTTTTGGATTTCATGTCGGGTGTGTTTCTCATCTCTTGCGCAGTG
TTTTGGACTGATTTTGACGAAAGCCAAAACGCGTCAATTTTCTGCCTCCG
GTGGCGCCTCCAGCGTGCCCCCCTTATCATCTGAGGGACGCCGTTGTGGC
TGCGGCCGCCCTGGCGCTGCGCAACCGATATATACATATCATATCGTTTA
TTTTTATCGCTATACAACCCTACAAATTGGTACTTCACACCATATTTTGC
AAAATGTTATCATACTGTATGAATCAGACATGAGCTGTTGTCGTATTTTT
TTAATTTACAGACACTTGTGAGGATCGTCCCGACCTACCGGGTATTATCG
ATTCCTTTTTTATATCGCAATCCCATCTCTGTCAAAAATCCACCACTCAA
GTGCCTCTTATATACAGGTGAGTGATGCGGACTTCGAGGATGATGCTGAT
CGAGATTGCACCATTCAGATGGCAAGGGAGACCCTAGAGGCTTTGCAGCA
GGGCGTGTCACGCGAAGGGGTAAGTGACGAGTGAACATCAAAACCGTTAC
TGTATTTTACTTTTCGTGTGAGATGTGCGACGCCATTTTATGTAGTTATT
TTATTGCACAACAGGTACTCGGTCCGTCACCTAAGTTTGTATCGTTCGTG
TTAAATTGGGATCTCTCCTTGTACATGTGAGATTTACAGAAAGGATACCG
TTCGACAACCCATAAGCACACCCAAATCCCCAAATAACTAGTTAAATCGA
AATTGGTGAAATTAGACCGAATTCTTTCCAACGTCATTTATTTCGCGTCA
CATGAGTGGGCAGCTTATTCGGTTGGATTACTGGCAAAAGTTGGGCCGAA
ATATTTCTCTTCGTGTTGCGTTTCACTTGTCCCCGATTATACCCCACCCC
CCTCTGATACCATATCCCACTGTTGATCAGTTTTAAGACTTTTTCCACGG
ATAAACATAGTCTCGACCTGGGGTGGAAAGATATCATATTACCACATCCC
CTGATAATGAATGATGACCTTGAGTAAATCCATCTAGTGGAAATACTCGG
GAGATCCACATATCGAAGCACCCGGGCACTTAATACCGTACAACACCCTG
ACTAACAACCAGATAGCGGATGATGTATAAAGTGCTGCCACTTTCCCTGT
TCACATTTGCCCTTTCCCTTGCTAGGGGGGTTGATACAGCTCCGGATCGT
GTGCATACTTTCGCCCTCCTCCCCTTTGGTCGTTACCTCCATGCTTTGCT
ATTAATAGGATGAGTAATGATGCCCCATATCGAGTAATATGCTACTACCC
AGAGTTGCGACGAATACCTGTCACCCCCCTCTTGGATATTAATCATCCTG
TTACATGTTTTTCGGCCCTGAATGATGAACATTTTTGTCAACGGAGGGGT
TTCATGTTTGATACTTGATAGCCTACACACTACAGATAGCCTACACAACA
CAGATAGCCTACACAACACAGATACCCTACACAACACGGATAGCCTACAC
ACTACCAAACATGAACATGAACGTGTCCCCAGTTTCTGCACCAGGTATTG
AGGGCGTTACACTCGAATCGAGTACATAAATGTACCTGTTTGTCCATATG
AGGGAGATGAGACCAAGCCAAATGGCAACGGTTTACGTGAACAGTCGATA
CTCCACCATTCCTCCGTATAGCACGATATTTTCTCATTCCCTGGCGATAC
AACCTCAACGGTGCTTTCGCACAAGGTCGCCTCCGCAAGGCTCGGGGATT
GGAAAGTATCAGCGTAGGAATGGAAGTGTGCAGTAGATTCCAAACACCCG
GAGTTGCGCTCACATATCTATATACAGGTGACGCACATGAGTTATAGGGA
TTGTGGAGAGCTCTAATTACAGGCCTCCCATCTCCTTCTCGGTCAGTCTT
GACGTGCGTTTGCAACACTCTAAAACTGAGTTCGTGCAGAAATAATTGTA
GCACGACACTAAGTGCAGAAATTACTACCAACTAAAATCGATGAAATGTT
TCTTCGTGACACGCGGTTGCACGCTGGATATACAGTACGTGCTTCTGTCT
CTTACCTGGTCGTTGCCCCGAGGCGTTGTTGTGTGCGCTGTGTGTGTCGA
TGTTCCTATGCGCCGTGACCGCCACCTTTAGGCTGTTAATCTCATGTAAC
GATATCCCCGGAGCTCACCGCGCAAGGTTTTCTTTATTTTTTTACCTCGC
TGTGCCATGGATGCTGCTCTAAAGGTATTTTCGTCAAACGAGGAAGTGGA
GGACGTTAACACGTCCATGTTGCCCATGCTGGGTGCTGACTATTACCTTG
GTTCACTCCTCCTCAAGCTTCCCTTCACAAGTCCCGAGGTGAGAGTACTT
GGAAAAAATATATATACATAACACATTGCTGTCCCGGTACCTGCGTTGCT
CGAGTGTGCTTCATCGCCATTGCCATGTTAACAACGTAAGTGGCGTGAAG
ATACGTTCGTCGTCGTTGTCTCCACAACACCGCGATGAAGAAGAGCGCAG
ACCGCAGCTTCAGGGAATGGGCGTGATATATTGTCTTACCACTCACTGGG
TTCAAAAGATGCACTGTGGTGGCAGATGCGGTAGAGGTCAGATGTCATTA
GGTGTCGACGTCGGAAACGAGTAGGATTGTGAAGCGGCCTTTTTAGTCTT
TTCATGTTACAGTACCTAATGCACGCCGATTGTCCTGTTCAGACTCGCCT
TCAAATGTTGGAAAACGCGGAGGCCTTCTTGTGCAAGTACCTCAACGCCT
GTGAGCAGTTTTGTCTCCTTGAAGATGGCGACCGTCATGCATGGCACTCA
ATGCTAAAGGATGGAGGAGGTTCAACGACCACCCGAGGACTCGCTGTGGG
TCGAGACCAGAAGATCGAGAGGTTTAGGTGATGATTCTCCAACTGTTACA
GAAAAGGGTTGCACGAGTGATGACGAGTCTATAATAAATCACCCATTGCG
CTCCGCTTTCGTTTGCCGATTCATCTGTTCCGTTTGCTGAATGCCCCAAT
AGGAAATACACTGAGGATTTATTCATCAACTGCACTCGCTTTGCCGGTTC
GTGTTGTATGTGTCTCAGGAGGCAAAAGCGAACTCGGCAAAGGATGAAGG
AAATCGAAGACGAACTTACAAGCGGGGAAGTAAAGGTACACAAAAATACC
TGAGGCGTATTTTCACTTCGTAAATTACAAAACTTCCGTCGACCCGACCG
TGGTTGGTCCTATTAATCGTTATGATAGTGCCAGATGGCGTGCTTGTTTC
AACCATGTATGGTCGGTCGGTTGTGGATATGCCGCATGCCTCTTAATTTT
TTTCTCCGAACCTTGTAGTTGTCTCGATCGAATTTATTTTCACTCGATGT
GAGGAAGGATGGGAAAGAAGAGCTAAAGTGATCCAATTTAGGAAGTAAAT
GATGTACTAGGGCATGTAAAGTCGTCTGGAAAACACAAGTTGAGAATTGT
AAGCTCTCCGAGAGACGGCTAGTGAGAGAGGAGTGGAAGTAATGACTGTG
GAATGTGCAAGGCTTCAGATCATACTGCACGAGTTCACTATACTAATTCA
AAGGACATGTAAATATTATATGGAGAGCGGACTTATAAATCCTTCCCCGA
GTGCAAAATATCTCCCTCAAAAAAGAAATGCGTTTGAGAGGGAACGGTGT
ACCATCTGCTTACTTTTGAACGTACTCGACTAAATTTCAGAAGCAGGACA
AGCGGAGGATTCGTTGGAGACACAATTCACCTATTCGCAGTTGAACGCAT
GGCTATGACTCTTCCAGAACTTGTCGTTTTCTTGGAATCATAATCTCACA
CATGTGCTACACAATACATGGTACCATGTTGTGCCATATTATACCATATT
TTACGTTGTGTGTACGGTAGATGTCGTCGTGACTGTTTGTGACAACGCTA
TAGTGCTGCGCGCGCAAGGTTATATAGTCCAAGCTTGCCCTTGGAGCTAT
CAATTATCCTTGGTGAACGACAAGTGCGATGCAACAATCCAGTCCCAGCT
ATGGGCGCTAAGTTGCCTCCTCTCATGTTAACTGTTGATCAGGATGACCT
GGATGACAGCGAGGATGATGGGATCAGGCGAGAAAAAGCACTCCTGGTCT
TGTCGAGTCTGGCTATTGATGCCCTTGACGAATTGTCTGGCCTCAGCAAG
GTTTGTCGTTACTGCTGTTCAATGGAGTGCGGTCGCTGGAATGTCTGCGT
CGCAGGCTGCGAGCCAGTATTACCTAGTGCATAGTACAAAACGGGGTAGG
TCGGACAACTTTTAGTATAACTTAGTTTATAGCAGTATACGGAGCATCGC
TCACCTCGCTTTGCTTAATCTTGTCGGTATATCCATGATGCACCCTGGAT
TCCTGTACTGCGCCCATGGATTGTTGTTGTTTGTCTCGATTGTTTGAAGC
CGACCAATGCCCGCGTTGTGTACCGTGTCCGTCAAGGAAACGGAAATGCT
CCGACACATGGTGGAAGCCAAGGAGCACGCACATCCGCCATGGGAAAAAC
AGGGTATTGCTACACTCGAAGACAAGCAAGCTGCATACCGTGCCAATGAC
TTGGAG back to topCoding sequence (CDS) from alignment at H-paniculata_contig3077:1746..13951- >mRNA_H-paniculata_contig3077.8332.1 ID=mRNA_H-paniculata_contig3077.8332.1|Name=mRNA_H-paniculata_contig3077.8332.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1422bp|location=Sequence derived from alignment at H-paniculata_contig3077:1746..13951- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGTCAAACCGCGCGATGTCAAACCGCGCGGTGAGTGATGCGGACTTCGA
GGATGATGCTGATCGAGATTGCACCATTCAGATGGCAAGGGAGACCCTAG
AGGCTTTGCAGCAGGGCGTGTCACGCGAAGGGGTGAGTGATGCGGACTTC
GAGGATGATGCTGATCGAGATTGCACCATTCAGATGGCAAGGGAGACCCT
AGAGGCTTTGCAGCAGGGCGTGTCACGCGAAGGGGTATTTTCGTCAAACG
AGGAAGTGGAGGACGTTAACACGTCCATGTTGCCCATGCTGGGTGCTGAC
TATTACCTTGGTTCACTCCTCCTCAAGCTTCCCTTCACAAGTCCCGAGGT
ATTTTCGTCAAACGAGGAAGTGGAGGACGTTAACACGTCCATGTTGCCCA
TGCTGGGTGCTGACTATTACCTTGGTTCACTCCTCCTCAAGCTTCCCTTC
ACAAGTCCCGAGACTCGCCTTCAAATGTTGGAAAACGCGGAGGCCTTCTT
GTGCAAGTACCTCAACGCCTGTGAGCAGTTTTGTCTCCTTGAAGATGGCG
ACCGTCATGCATGGCACTCAATGCTAAAGGATGGAGGAGGTTCAACGACC
ACCCGAGGACTCGCTGTGGGTCGAGACCAGAAGATCGAGAGGTTTAGACT
CGCCTTCAAATGTTGGAAAACGCGGAGGCCTTCTTGTGCAAGTACCTCAA
CGCCTGTGAGCAGTTTTGTCTCCTTGAAGATGGCGACCGTCATGCATGGC
ACTCAATGCTAAAGGATGGAGGAGGTTCAACGACCACCCGAGGACTCGCT
GTGGGTCGAGACCAGAAGATCGAGAGGTTTAGGAGGCAAAAGCGAACTCG
GCAAAGGATGAAGGAAATCGAAGACGAACTTACAAGCGGGGAAGTAAAGG
AGGCAAAAGCGAACTCGGCAAAGGATGAAGGAAATCGAAGACGAACTTAC
AAGCGGGGAAGTAAAGGATGACCTGGATGACAGCGAGGATGATGGGATCA
GGCGAGAAAAAGCACTCCTGGTCTTGTCGAGTCTGGCTATTGATGCCCTT
GACGAATTGTCTGGCCTCAGCAAGGATGACCTGGATGACAGCGAGGATGA
TGGGATCAGGCGAGAAAAAGCACTCCTGGTCTTGTCGAGTCTGGCTATTG
ATGCCCTTGACGAATTGTCTGGCCTCAGCAAGGAAACGGAAATGCTCCGA
CACATGGTGGAAGCCAAGGAGCACGCACATCCGCCATGGGAAAAACAGGG
TATTGCTACACTCGAAGACAAGCAAGCTGCATACCGTGCCAATGACTTGG
AGGAAACGGAAATGCTCCGACACATGGTGGAAGCCAAGGAGCACGCACAT
CCGCCATGGGAAAAACAGGGTATTGCTACACTCGAAGACAAGCAAGCTGC
ATACCGTGCCAATGACTTGGAG back to top
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