mRNA_H-paniculata_contig30756.8328.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: D8LEJ6_ECTSI (p28, 28 kDa light chain of axonemal inner dynein arms n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D8LEJ6_ECTSI) HSP 1 Score: 277 bits (708), Expect = 5.900e-92 Identity = 144/161 (89.44%), Postives = 152/161 (94.41%), Query Frame = 1
Query: 1 LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGGSK 483
L + QEQLD KL+ERQALETGICPVREDLYTQAFDELIRHVT+DGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGM+EMEEQIA+L EDKKGLE+ VSELRNKVEVIEK ESERR VD+KKRKEE+DFLKYQGQHLDSFLKQIGGSK
Sbjct: 111 LAVIALQEQLDNKLLERQALETGICPVREDLYTQAFDELIRHVTLDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMAEMEEQIAALGEDKKGLELHVSELRNKVEVIEKGESERRAVDDKKRKEEVDFLKYQGQHLDSFLKQIGGSK 271
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A7S2UXS2_9STRA (Hypothetical protein n=1 Tax=Fibrocapsa japonica TaxID=94617 RepID=A0A7S2UXS2_9STRA) HSP 1 Score: 235 bits (599), Expect = 1.160e-75 Identity = 125/161 (77.64%), Postives = 139/161 (86.34%), Query Frame = 1
Query: 1 LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGGSK 483
L + QEQLDK+LVERQA ET ICPVREDLY+Q FDELIRHVT+D PERGLL LRVRDEIRMTIDAYKTLYDSSVTFG+KKQLQAE GMS+ME+QIA LE KK E + ELRNK+EVIEK E ERRG++EKKRKEEIDFLKYQGQHLD+ +K +GGSK
Sbjct: 92 LDVITLQEQLDKRLVERQARETDICPVREDLYSQCFDELIRHVTLDSPERGLLLLRVRDEIRMTIDAYKTLYDSSVTFGIKKQLQAEMGMSDMEKQIAILELTKKERENKTLELRNKLEVIEKREVERRGLEEKKRKEEIDFLKYQGQHLDTSIKHVGGSK 252
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A835YSJ6_9STRA (p28 protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YSJ6_9STRA) HSP 1 Score: 233 bits (594), Expect = 4.100e-75 Identity = 120/161 (74.53%), Postives = 141/161 (87.58%), Query Frame = 1
Query: 1 LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGGSK 483
L + QE LDKKL ERQA +TGICPVR+DLY+QAFDELIR VT+DGPERGLL LRVRDEIRMTIDAY+TLYDSSV FG+KKQLQAEQGM EME +IA LEE K+ LE + ELRN+VE++EK E+E+R V++K+R+EE++FLKYQGQHLDSFLKQIGGSK
Sbjct: 77 LDVVTLQECLDKKLGERQARDTGICPVRDDLYSQAFDELIRQVTLDGPERGLLLLRVRDEIRMTIDAYRTLYDSSVVFGIKKQLQAEQGMDEMEAEIAQLEESKQALEYRAQELRNRVELMEKREAEQRSVEDKRRREEVEFLKYQGQHLDSFLKQIGGSK 237
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A7S2CCB2_9STRA (Hypothetical protein n=1 Tax=Florenciella parvula TaxID=236787 RepID=A0A7S2CCB2_9STRA) HSP 1 Score: 228 bits (581), Expect = 4.000e-73 Identity = 120/161 (74.53%), Postives = 138/161 (85.71%), Query Frame = 1
Query: 1 LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGGSK 483
L + QE LDK+L+ERQA ETGICPVREDLY+Q FDELIR VT+DGPERGLL LRVRDEI+MTIDAYK LY+SSVTFGV+KQLQAEQGM+E+E +I LE KK LE QV ELRNKVEV EK +ER+ +++KKRKEEIDFLKYQGQHLDSFL+Q+GG K
Sbjct: 78 LDVINLQEMLDKRLLERQARETGICPVREDLYSQCFDELIRQVTLDGPERGLLTLRVRDEIKMTIDAYKILYESSVTFGVRKQLQAEQGMAELESEIEGLEAAKKELENQVLELRNKVEVSEKRGNERKTLEDKKRKEEIDFLKYQGQHLDSFLRQLGGGK 238
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A7S1GAQ8_9STRA (Hypothetical protein n=1 Tax=Bicosoecida sp. CB-2014 TaxID=1486930 RepID=A0A7S1GAQ8_9STRA) HSP 1 Score: 223 bits (569), Expect = 3.120e-71 Identity = 119/159 (74.84%), Postives = 135/159 (84.91%), Query Frame = 1
Query: 1 LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGG 477
L + QE LD+KL+ERQA E GICPVREDLY+Q FDELIR VT++ PERGLL LRVRDEIRMTIDAYKTLY+SSVTFGV+KQLQAEQG++EME +I L E KK L+ QV ELRNKVEVIEK +ERR ++EKKRKEEIDFLKYQGQHLD FLK +GG
Sbjct: 82 LDVINLQEALDEKLMERQAREMGICPVREDLYSQCFDELIRQVTINSPERGLLLLRVRDEIRMTIDAYKTLYESSVTFGVRKQLQAEQGLAEMESKIEELSEAKKDLQNQVLELRNKVEVIEKRATERRQLEEKKRKEEIDFLKYQGQHLDQFLKTLGG 240
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: F0Y5N0_AURAN (Uncharacterized protein n=1 Tax=Aureococcus anophagefferens TaxID=44056 RepID=F0Y5N0_AURAN) HSP 1 Score: 221 bits (564), Expect = 3.440e-71 Identity = 113/152 (74.34%), Postives = 134/152 (88.16%), Query Frame = 1
Query: 19 QEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIG 474
QE LDK+L++RQA + GICPVREDLY+Q +DELIR +T+DGPERGLL LRVRDEIRMTIDAYK LYDSSVTFG++KQLQAEQGMSE+E +IA LE + K LE QV ELRN VEVIEK E+E + V++KKRK+EIDFLKYQGQHLD+FL+Q+G
Sbjct: 36 QEDLDKRLLDRQARDAGICPVREDLYSQCYDELIRQITLDGPERGLLLLRVRDEIRMTIDAYKVLYDSSVTFGIRKQLQAEQGMSELEGRIAELEAENKDLENQVLELRNGVEVIEKRENEHKAVEDKKRKDEIDFLKYQGQHLDAFLRQLG 187
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A8J2S909_9STRA (Hypothetical protein n=1 Tax=Pelagomonas calceolata TaxID=35677 RepID=A0A8J2S909_9STRA) HSP 1 Score: 212 bits (539), Expect = 8.380e-67 Identity = 108/152 (71.05%), Postives = 129/152 (84.87%), Query Frame = 1
Query: 19 QEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIG 474
QE LD KL+ERQA + GICPVREDLY Q FDELIR +T+DGPERGLL LRVRDE+RMT+DAYK LYDSSVTFGV+KQLQAEQGM+E++ ++A LE + K LE +V ELRN VEV+EK SE + + +KKRK+EIDFLKYQGQHLD FL+Q+G
Sbjct: 79 QEALDAKLLERQARDAGICPVREDLYAQCFDELIRQLTLDGPERGLLLLRVRDEVRMTVDAYKVLYDSSVTFGVRKQLQAEQGMAELQGRVAELEAENKDLENRVLELRNGVEVVEKRASEHKAMADKKRKDEIDFLKYQGQHLDQFLRQLG 230
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A812WGS2_SYMMI (Hypothetical protein n=1 Tax=Symbiodinium microadriaticum TaxID=2951 RepID=A0A812WGS2_SYMMI) HSP 1 Score: 208 bits (530), Expect = 4.760e-66 Identity = 107/161 (66.46%), Postives = 132/161 (81.99%), Query Frame = 1
Query: 1 LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGGSK 483
L + QE+LDKKL ER+A ETGICPVRE+LY+Q FDELIR V +D PERGLL +R RDE++MTIDAYKTLY SSVTFG+KKQL+AEQG+ +EEQ L++ LE++V ELR+K+E+IEK E+ERR +EKKRKEE+DFLKYQGQHLDSF KQ+ +K
Sbjct: 30 LDVISLQEKLDKKLSERKARETGICPVREELYSQCFDELIRQVALDSPERGLLLMRTRDEVKMTIDAYKTLYSSSVTFGIKKQLRAEQGIPALEEQANELQKTNSQLELEVQELRSKLEIIEKREAERRTTEEKKRKEELDFLKYQGQHLDSFTKQMNVAK 190
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A6G0XVN6_9STRA (Uncharacterized protein n=1 Tax=Aphanomyces euteiches TaxID=100861 RepID=A0A6G0XVN6_9STRA) HSP 1 Score: 209 bits (532), Expect = 9.670e-66 Identity = 106/158 (67.09%), Postives = 132/158 (83.54%), Query Frame = 1
Query: 7 LFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGGS 480
+ + QEQ+D KL++RQA E+GICPVRED+Y+Q FDELIR VT++ PERGLL LR+RDEIRMT DAYKTLYDSS+TFGV+KQLQAEQGM +E++I L E+K+ E +V EL NK+E+IEK +ERR + EK+ KEEI+FLKYQGQHLD+FLK GGS
Sbjct: 75 VIKLQEQMDAKLIKRQARESGICPVREDIYSQCFDELIRQVTINSPERGLLLLRIRDEIRMTTDAYKTLYDSSITFGVRKQLQAEQGMGSIEDKILLLTEEKREYENKVLELTNKLEIIEKRSNERRALQEKRYKEEIEFLKYQGQHLDAFLKSAGGS 232
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Match: A0A1V9YGG0_9STRA (Dynein light chain intermediate polypeptide n=4 Tax=Saprolegniaceae TaxID=4764 RepID=A0A1V9YGG0_9STRA) HSP 1 Score: 209 bits (532), Expect = 1.060e-65 Identity = 107/157 (68.15%), Postives = 131/157 (83.44%), Query Frame = 1
Query: 7 LFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERGLLCLRVRDEIRMTIDAYKTLYDSSVTFGVKKQLQAEQGMSEMEEQIASLEEDKKGLEVQVSELRNKVEVIEKAESERRGVDEKKRKEEIDFLKYQGQHLDSFLKQIGG 477
+ + QEQ+D KL++RQA E+GICPVRED+Y Q FDELIR VT++ PERGLL LR+RDEIRMT DAYKTLY+SS+TFGV+KQLQAEQGM +E++IA L E+K+ E +V EL NK+EVIEK SERR + EK+ KEEI+FLKYQGQHLD+FLK GG
Sbjct: 77 VIKLQEQMDAKLIKRQARESGICPVREDIYAQCFDELIREVTINSPERGLLLLRIRDEIRMTTDAYKTLYESSITFGVRKQLQAEQGMGSLEDRIAVLTEEKREFENKVLELTNKLEVIEKRSSERRTLQEKRYKEEIEFLKYQGQHLDAFLKSAGG 233 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30756.8328.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30756.8328.1 >prot_H-paniculata_contig30756.8328.1 ID=prot_H-paniculata_contig30756.8328.1|Name=mRNA_H-paniculata_contig30756.8328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=162bp LCLFRFQEQLDKKLVERQALETGICPVREDLYTQAFDELIRHVTMDGPERback to top mRNA from alignment at H-paniculata_contig30756:338..2709- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30756.8328.1 ID=mRNA_H-paniculata_contig30756.8328.1|Name=mRNA_H-paniculata_contig30756.8328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2372bp|location=Sequence derived from alignment at H-paniculata_contig30756:338..2709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30756:338..2709- >mRNA_H-paniculata_contig30756.8328.1 ID=mRNA_H-paniculata_contig30756.8328.1|Name=mRNA_H-paniculata_contig30756.8328.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=972bp|location=Sequence derived from alignment at H-paniculata_contig30756:338..2709- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |