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Homology
The following BLAST results are available for this feature:
Alignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
| Property Name | Value |
|---|
| Hectar predicted targeting category | other localisation |
| Exons | 5 |
| Model size | 1310 |
| Cds size | 1299 |
| Stop | 0 |
| Start | 1 |
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following UTR feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig307.8315.1 >prot_H-paniculata_contig307.8315.1 ID=prot_H-paniculata_contig307.8315.1|Name=mRNA_H-paniculata_contig307.8315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=433bp
MSGLNVTNSVTSEKGYGAVVCNEPGGSPTAGMDVTDSTFVGNKGGGLAAF
NSDLTIGGTNFAENTGGAAYFETSDIQRRFDVEVDGVTFENNSDPATAWG
AAPAEGDGGSDLVMRSTGDGQITSTAKLNSVGCIADVPSKCGMAIDDTKF
TVTGDSLDCGVCNLAGEPIEVASANAGIPASSCGELKTAVESGQSGTVEL
TANIICDETIKVVDGQSVSLTSGGTTPGGQYSVKAGSPFTGGASASTSTE
EDRNAGDDHSIFVVEKGGTLDANSIVFDTKTPGTPDEGGSVNDTSSASNT
TTGGGGVRAIYNAGNLTIADCEFTGSGTEASQKVKNGGAIYMAGDLDAPD
ASFGSVTCTDSYFSDNGVGENGGAIFAEGGGDLNLKGNTFERNEASDGRG
GAVFSDRGVKNDFTDNTFDANAAMDGAAIVCYG back to topmRNA from alignment at H-paniculata_contig307:8430..10900- Legend: UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below. >mRNA_H-paniculata_contig307.8315.1 ID=mRNA_H-paniculata_contig307.8315.1|Name=mRNA_H-paniculata_contig307.8315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=2471bp|location=Sequence derived from alignment at H-paniculata_contig307:8430..10900- (Halopteris paniculata Hal_grac_a_UBK monoicous)
CGGGGGTACAATGAGTGGGCTCAACGTGACTAACTCCGTCACTTCCGAGG
TACGATATCGTGTGTGGAGGGTACAAAGTCGATCGTCTCGTAGTATGTGG
TGACATCATTTTTCGATAGTGCAATCATACCAATACAAACAACGTCTTTT
CGAGTCATGACTGGCATGTACGTTTTTCGTGGAAATCTGGAATTCTGGGA
TTGTTCAGATTTTTGAATGGAACTCTAAAGCCCAAATTTACCCGAAAGAA
CTGTCAACCCTTTCTCTTCTTTAGGAGCAGCACGAAAACAACGATTGCTA
GCTATTTTGGGTAGATTTCGGATCTTAGTGACTATCCGAACCTAGAAATT
TTCAGATATCCAGATTTTCTCAAAAACTCCTCCTACTAGTAGTGTCTCCT
AGAGACATCCCTCCCTCCCCCGAGTTTGATTTTCCGTGAGTTACACGGCC
CCTACCATGACAATCAGCAATATGCACTATTTCCTTCGTTTCGTCTATTT
TTGCCATCTTTGCGTCGATGCCCAACATATAGAAGGGATACGGGGCGGTC
GTGTGCAACGAGCCTGGGGGGTCCCCGACAGCTGGTATGGACGTTACAGA
CTCGACTTTCGTTGGTAACAAGGGAGGTGGACTGGCGGCGTTCAACTCAG
ACTTGACCATCGGCGGCACGAACTTCGCGGAGAACACAGGAGGCGCAGCG
TACTTCGAGACTTCAGACATACAGCGTCGGTTCGATGTCGAGGTAAGGGA
GCTGCGCGAGCAAAGTAGCTAGAAGACGCGTGAAACGTTGATTTCCTGCA
ACACATCCAGCATCTGTTTCCGGCGTAAGGCTTGAATTACGTCAGCTCTC
TTGATCCTTACCGCTACTCTTGGTAAGTGTAGACGCGAAAAAGTGTCACA
CAGTTCCAATAGGCATTCAATATTCTGTCCTTACCAATCACTTGATATTT
GTCTTGGCGGCGGCGCAATACTGCGTATGTGTACGCTCCTCGTGATGTCG
TGGCATCAGGTCGACGGAGTGACCTTCGAAAATAACTCAGACCCCGCAAC
TGCGTGGGGCGCCGCCCCGGCCGAAGGAGACGGAGGGTCTGATCTGGTGA
TGCGAAGCACTGGTGATGGACAGGTAAGGAACATTATTTTTCTAAATAGA
CTTGTTATCGTGGTCATTTGCATGCCACCAATGTCTTGTACGCTGCTTGT
TTGCTTCGCGTTGTCTGCATAATTTCGAAAAGCACTTCGAGGCTGTTGGT
ATCGACTGTACTGACACAGCATAATATGTTGTCCGTCATGTATCTTCATG
ATGTACTTACCGCGTACTGATCGCATGACGGTTCGTGATGACCTCAGATA
ACATCGACGGCAAAGCTCAATTCCGTTGGCTGTATTGCCGATGTCCCGAG
CAAGTGCGGCATGGCTATCGACGACACCAAGTTCACCGTGACCGGCGACT
CGTTAGATTGCGGCGTCTGCAACCTCGCGGGCGAGCCAATAGAAGTGGCT
TCGGCCAATGCCGGTATCCCGGCAAGCTCTTGCGGGGAGCTGAAGACCGC
GGTCGAGTCAGGCCAGAGCGGGACCGTGGAACTGACAGCCAACATTATCT
GCGACGAGACTATCAAAGTGGTAGATGGCCAGTCCGTCAGCCTCACGTCC
GGCGGCACGACTCCCGGCGGTCAGTACAGCGTCAAAGCCGGCAGTCCGTT
CACGGGCGGCGCAAGCGCCAGCACGAGCACTGAGGAGGACCGTAACGCCG
GTGACGATCACAGCATTTTCGTAGTCGAGAAGGGAGGCACACTTGACGCA
AATTCTATCGTATTCGATACCAAGACGCCAGGCACGCCCGACGAGGGCGG
TTCCGTCAACGATACTAGCTCGGCATCGAACACGACGACGGGTGGTGGCG
GGGTCCGCGCCATCTACAACGCTGGAAACCTTACCATTGCCGACTGCGAG
TTTACGGGTTCCGGTACCGAGGCAAGCCAGAAAGTGAAGAACGGAGGCGC
GGTGAGACTGAAAAATCTATATTTGCGCGTGACATTTGCCGTCTCTTTCC
GCCTAACGTCCTTACGTGCTCACGAGAGGGCCGTATCGCTTCGGCAGCTT
ACTTCTTTGTCATGCTTCTTTTACTGTCTTGTACTGAAACCCCACACCGC
GCAGTCCGTCCCCCTACCGTGTCCGTCCCGTCTTGACAGATTTACATGGC
GGGTGACCTGGATGCCCCGGACGCCTCTTTCGGGTCCGTAACGTGTACCG
ACAGCTATTTCTCCGACAACGGCGTGGGCGAGAACGGCGGGGCCATCTTC
GCCGAGGGGGGTGGAGACCTGAACCTCAAGGGCAATACATTCGAACGCAA
CGAGGCAAGTGACGGGCGAGGCGGGGCCGTCTTCTCCGACCGAGGCGTGA
AAAACGATTTCACCGACAATACGTTCGACGCCAACGCTGCAATGGATGGC
GCAGCTATTGTCTGCTACGGA back to topCoding sequence (CDS) from alignment at H-paniculata_contig307:8430..10900- >mRNA_H-paniculata_contig307.8315.1 ID=mRNA_H-paniculata_contig307.8315.1|Name=mRNA_H-paniculata_contig307.8315.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=2598bp|location=Sequence derived from alignment at H-paniculata_contig307:8430..10900- (Halopteris paniculata Hal_grac_a_UBK monoicous)
ATGAGTGGGCTCAACGTGACTAACTCCGTCACTTCCGAGATGAGTGGGCT
CAACGTGACTAACTCCGTCACTTCCGAGAAGGGATACGGGGCGGTCGTGT
GCAACGAGCCTGGGGGGTCCCCGACAGCTGGTATGGACGTTACAGACTCG
ACTTTCGTTGGTAACAAGGGAGGTGGACTGGCGGCGTTCAACTCAGACTT
GACCATCGGCGGCACGAACTTCGCGGAGAACACAGGAGGCGCAGCGTACT
TCGAGACTTCAGACATACAGCGTCGGTTCGATGTCGAGAAGGGATACGGG
GCGGTCGTGTGCAACGAGCCTGGGGGGTCCCCGACAGCTGGTATGGACGT
TACAGACTCGACTTTCGTTGGTAACAAGGGAGGTGGACTGGCGGCGTTCA
ACTCAGACTTGACCATCGGCGGCACGAACTTCGCGGAGAACACAGGAGGC
GCAGCGTACTTCGAGACTTCAGACATACAGCGTCGGTTCGATGTCGAGGT
CGACGGAGTGACCTTCGAAAATAACTCAGACCCCGCAACTGCGTGGGGCG
CCGCCCCGGCCGAAGGAGACGGAGGGTCTGATCTGGTGATGCGAAGCACT
GGTGATGGACAGGTCGACGGAGTGACCTTCGAAAATAACTCAGACCCCGC
AACTGCGTGGGGCGCCGCCCCGGCCGAAGGAGACGGAGGGTCTGATCTGG
TGATGCGAAGCACTGGTGATGGACAGATAACATCGACGGCAAAGCTCAAT
TCCGTTGGCTGTATTGCCGATGTCCCGAGCAAGTGCGGCATGGCTATCGA
CGACACCAAGTTCACCGTGACCGGCGACTCGTTAGATTGCGGCGTCTGCA
ACCTCGCGGGCGAGCCAATAGAAGTGGCTTCGGCCAATGCCGGTATCCCG
GCAAGCTCTTGCGGGGAGCTGAAGACCGCGGTCGAGTCAGGCCAGAGCGG
GACCGTGGAACTGACAGCCAACATTATCTGCGACGAGACTATCAAAGTGG
TAGATGGCCAGTCCGTCAGCCTCACGTCCGGCGGCACGACTCCCGGCGGT
CAGTACAGCGTCAAAGCCGGCAGTCCGTTCACGGGCGGCGCAAGCGCCAG
CACGAGCACTGAGGAGGACCGTAACGCCGGTGACGATCACAGCATTTTCG
TAGTCGAGAAGGGAGGCACACTTGACGCAAATTCTATCGTATTCGATACC
AAGACGCCAGGCACGCCCGACGAGGGCGGTTCCGTCAACGATACTAGCTC
GGCATCGAACACGACGACGGGTGGTGGCGGGGTCCGCGCCATCTACAACG
CTGGAAACCTTACCATTGCCGACTGCGAGTTTACGGGTTCCGGTACCGAG
GCAAGCCAGAAAGTGAAGAACGGAGGCGCGATAACATCGACGGCAAAGCT
CAATTCCGTTGGCTGTATTGCCGATGTCCCGAGCAAGTGCGGCATGGCTA
TCGACGACACCAAGTTCACCGTGACCGGCGACTCGTTAGATTGCGGCGTC
TGCAACCTCGCGGGCGAGCCAATAGAAGTGGCTTCGGCCAATGCCGGTAT
CCCGGCAAGCTCTTGCGGGGAGCTGAAGACCGCGGTCGAGTCAGGCCAGA
GCGGGACCGTGGAACTGACAGCCAACATTATCTGCGACGAGACTATCAAA
GTGGTAGATGGCCAGTCCGTCAGCCTCACGTCCGGCGGCACGACTCCCGG
CGGTCAGTACAGCGTCAAAGCCGGCAGTCCGTTCACGGGCGGCGCAAGCG
CCAGCACGAGCACTGAGGAGGACCGTAACGCCGGTGACGATCACAGCATT
TTCGTAGTCGAGAAGGGAGGCACACTTGACGCAAATTCTATCGTATTCGA
TACCAAGACGCCAGGCACGCCCGACGAGGGCGGTTCCGTCAACGATACTA
GCTCGGCATCGAACACGACGACGGGTGGTGGCGGGGTCCGCGCCATCTAC
AACGCTGGAAACCTTACCATTGCCGACTGCGAGTTTACGGGTTCCGGTAC
CGAGGCAAGCCAGAAAGTGAAGAACGGAGGCGCGATTTACATGGCGGGTG
ACCTGGATGCCCCGGACGCCTCTTTCGGGTCCGTAACGTGTACCGACAGC
TATTTCTCCGACAACGGCGTGGGCGAGAACGGCGGGGCCATCTTCGCCGA
GGGGGGTGGAGACCTGAACCTCAAGGGCAATACATTCGAACGCAACGAGG
CAAGTGACGGGCGAGGCGGGGCCGTCTTCTCCGACCGAGGCGTGAAAAAC
GATTTCACCGACAATACGTTCGACGCCAACGCTGCAATGGATGGCGCAGC
TATTGTCTGCTACGGAATTTACATGGCGGGTGACCTGGATGCCCCGGACG
CCTCTTTCGGGTCCGTAACGTGTACCGACAGCTATTTCTCCGACAACGGC
GTGGGCGAGAACGGCGGGGCCATCTTCGCCGAGGGGGGTGGAGACCTGAA
CCTCAAGGGCAATACATTCGAACGCAACGAGGCAAGTGACGGGCGAGGCG
GGGCCGTCTTCTCCGACCGAGGCGTGAAAAACGATTTCACCGACAATACG
TTCGACGCCAACGCTGCAATGGATGGCGCAGCTATTGTCTGCTACGGA back to top
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