mRNA_H-paniculata_contig30586.8287.1 (mRNA) Halopteris paniculata Hal_grac_a_UBK monoicous
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Overview
Homology
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A6H5JM32_9PHAE (TLDc domain-containing protein n=1 Tax=Ectocarpus sp. CCAP 1310/34 TaxID=867726 RepID=A0A6H5JM32_9PHAE) HSP 1 Score: 260 bits (664), Expect = 1.350e-83 Identity = 131/185 (70.81%), Postives = 149/185 (80.54%), Query Frame = 1
Query: 76 PGGGGAGEDVPGRVSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSKIGGYV 630
PGGGG GE G VS WVSERAPLLHHCLSTF+HTRCFLYG A R+ GV LPS A LPPS+AVFSPP+PQQPS LL+ +AE+FGLALS KALQGPW+R+Y SEEDG+SFNR V FKL G+GGPTVIL++E+ +GAV+GGCADSPWKESNS YGGE SFL LAP+FKIIP K+ V
Sbjct: 8 PGGGGNGE---GGVSPQGLTAWVSERAPLLHHCLSTFIHTRCFLYGDA-RSLGVEALPSCAASLPPSLAVFSPPRPQQPSFLLDSHRAEIFGLALSTKALQGPWMRIYNSEEDGLSFNR-VAFKLVGYGGPTVILIRERESGAVWGGCADSPWKESNSFYGGEASFLFRLAPDFKIIPHKMARRV 187
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: D7FR85_ECTSI (Uncharacterized protein n=1 Tax=Ectocarpus siliculosus TaxID=2880 RepID=D7FR85_ECTSI) HSP 1 Score: 175 bits (444), Expect = 1.560e-50 Identity = 94/145 (64.83%), Postives = 111/145 (76.55%), Query Frame = 1
Query: 7 RFRSEKLAASVISFVHPPTK--AKI-PGGGGAGEDVPGRVSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNR 432
+FRS+KLA SV + + ++I PGGGG GE G VS + WVSERAPLLHHCLSTF+HTRCFLYG A R+ GV LPS A LPPS+AVFSPP+PQQPS LL+ +AE+FGLALS KALQGPW+R+Y SEEDG+SFNR
Sbjct: 144 QFRSDKLAESVANHLGSARMGVSRIGPGGGGDGE---GGVSPQGLKAWVSERAPLLHHCLSTFIHTRCFLYGDA-RSLGVEALPSCAASLPPSLAVFSPPRPQQPSFLLDSHRAEIFGLALSTKALQGPWMRIYNSEEDGLSFNR 284
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A835YL28_9STRA (TLD-domain-containing protein n=1 Tax=Tribonema minus TaxID=303371 RepID=A0A835YL28_9STRA) HSP 1 Score: 142 bits (357), Expect = 4.670e-36 Identity = 69/167 (41.32%), Postives = 99/167 (59.28%), Query Frame = 1
Query: 115 VSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSK 615
++ QF +W +E AP LHH L T++ RCF LPPS F P+ QPS +L EL GLA+ QGPW+RL+TS+EDG+SFNR +C + G+GGP++++++++ +GAV GG A W+E N+ YGG SFL L+P F++ SK
Sbjct: 207 ITFDQFAQWAAEEAPFLHHALGTYMQRRCF----------------PDDKLPPSAPKFETPRLLQPSSVLSGLGPELLGLAIGRVMAQGPWVRLFTSDEDGLSFNR-LCHSIMGYGGPSLLVLRDRVSGAVLGGVASDTWRELNTFYGGSESFLFQLSPSFRVCQSK 356
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A7S3YII2_HETAK (Hypothetical protein (Fragment) n=1 Tax=Heterosigma akashiwo TaxID=2829 RepID=A0A7S3YII2_HETAK) HSP 1 Score: 108 bits (271), Expect = 2.290e-25 Identity = 58/125 (46.40%), Postives = 78/125 (62.40%), Query Frame = 1
Query: 280 AVFSPPQP--QQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERS--------FLLSLAPEFKIIPSKIGG 624
A F+PP+P P +L+ L LA + +QGPW +LY S EDG SFNR VC K G+GGPT++LV+++G GAV+GG A +PW+E N YGG FL L PEF+I P+++GG
Sbjct: 1 AAFAPPRPLGSSPGGILQGRARTLALLAAHSAKVQGPWAKLYDSREDGTSFNR-VCHKALGYGGPTLVLVRDEG-GAVFGGLAPAPWREGNEMYGGXXXXXXXXXXXFLFRLEPEFRIYPARVGG 123
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A4D9CZC0_9STRA (TLDc domain-containing protein n=1 Tax=Nannochloropsis salina CCMP1776 TaxID=1027361 RepID=A0A4D9CZC0_9STRA) HSP 1 Score: 105 bits (262), Expect = 1.090e-22 Identity = 64/157 (40.76%), Postives = 92/157 (58.60%), Query Frame = 1
Query: 127 QFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEF 597
+F W ++ PLL+ + F + FL G + TA LPPS+ + + P+ PS LL Q+ +FGLAL++ +LQG W RLYTS+E+G+SFNR +C + G+ GPTV+LV++ TGAV+G W+ESN +G FL L P F
Sbjct: 288 EFYAWATDCFPLLYQPFAAFFYASLFLRGPSP----------TAFALPPSLRL-ALPRLLAPSSLLTAPQS-VFGLALASPSLQGAWTRLYTSDENGLSFNR-ICHHILGYRGPTVLLVRDT-TGAVFGFFTTEAWRESNGFFGSSDCFLFRLCPSF 430
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A067BP30_SAPPC (Uncharacterized protein n=1 Tax=Saprolegnia parasitica (strain CBS 223.65) TaxID=695850 RepID=A0A067BP30_SAPPC) HSP 1 Score: 97.4 bits (241), Expect = 1.790e-20 Identity = 58/169 (34.32%), Postives = 83/169 (49.11%), Query Frame = 1
Query: 115 VSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSKIG 621
+SL F W S PLLH S ++ +CF LP + + + P+ PS +L + EL L+ + LQ W RLYTS +DG+SFNR +C+ L G+ GPT+I+ GA +G D+PWK+ + +GG FL L P + PS G
Sbjct: 71 ISLPHFVSWTSASWPLLHTVFSAWMAHKCF------------------ASLPSTRSTYMAPRLSHPSDILS--RGELIALSGQSMQLQDTWDRLYTSTQDGLSFNR-LCYHLLGYAGPTLIVCTAM-DGATFGAYCDTPWKDQSKFFGGPGCFLYRLCPNLLVCPSAGG 217
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A7S2SM30_9STRA (Hypothetical protein (Fragment) n=1 Tax=Rhizochromulina marina TaxID=1034831 RepID=A0A7S2SM30_9STRA) HSP 1 Score: 99.0 bits (245), Expect = 1.940e-20 Identity = 62/173 (35.84%), Postives = 91/173 (52.60%), Query Frame = 1
Query: 115 VSLAQFQRWVSERAPLLHHCLSTFVHTRCFL--YGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLE---EFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSKI 618
V+ F W + + PLLH L T + RCF G + T G+ P+ QPS +L + A LFGLA + LQGPW RLYTS EDG+SF+R V + G+ GP++++++++ GA++GG A S W+ESNS G FL + P F + ++
Sbjct: 256 VTFPAFADWSAIQCPLLHLSLVTLIQARCFSPWTGHSGLTNGL-----------------QLPKLDQPSAILTGKPDLCAGLFGLASAAVELQGPWARLYTSSEDGLSFSRLV-HSVLGYTGPSILIIEDE-EGAIFGGFAASGWRESNSFSGRPGCFLFRMRPTFSVYRPRL 409
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A067C5D2_SAPPC (Uncharacterized protein n=2 Tax=Saprolegnia TaxID=4769 RepID=A0A067C5D2_SAPPC) HSP 1 Score: 92.8 bits (229), Expect = 1.980e-18 Identity = 57/169 (33.73%), Postives = 81/169 (47.93%), Query Frame = 1
Query: 115 VSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSKIG 621
+SL F W S PLLH ++ +CF LP + A + P+ S +L + EL L+ + LQ W RLYTS +DG+SFNR +C+ L G+ GPT+I+ GA +G D+PWK+ + +GG FL L P + PS G
Sbjct: 168 ISLPHFVSWASASWPLLHTVFGAWMAHKCF------------------ASLPSTRASYMAPRLSHRSDILS--RGELIALSGQSMQLQDTWDRLYTSTQDGLSFNR-LCYHLLGYAGPTLIVCTAM-DGATFGAYCDTPWKDQSKFFGGPGCFLYRLCPNLLVCPSAGG 314
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A024TQ15_9STRA (TLDc domain-containing protein n=1 Tax=Aphanomyces invadans TaxID=157072 RepID=A0A024TQ15_9STRA) HSP 1 Score: 90.5 bits (223), Expect = 1.330e-17 Identity = 56/170 (32.94%), Postives = 83/170 (48.82%), Query Frame = 1
Query: 115 VSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSKIGG 624
++ + W+ APLLH S+++ +C G+ S + P ++ PS +L + E L++ + LQ W RLYTS EDG+SFNR + + L G+ GPT +LV GA +G AD+PWKES +GG FL P F + P+ G
Sbjct: 172 ITPSTLAAWIPTHAPLLHTVFSSWMSRKCL------------GVHSKVSYVAPRLS--------HPSDILS--RGEALALSMQSVQLQNNWDRLYTSTEDGLSFNR-LTYHLLGYTGPT-LLVMTDADGATFGAYADTPWKESTKFFGGPGCFLFRTTPSFLLCPATTGA 317
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Match: A0A1V9ZH42_9STRA (TLDc domain-containing protein n=1 Tax=Thraustotheca clavata TaxID=74557 RepID=A0A1V9ZH42_9STRA) HSP 1 Score: 89.7 bits (221), Expect = 2.490e-17 Identity = 54/167 (32.34%), Postives = 80/167 (47.90%), Query Frame = 1
Query: 115 VSLAQFQRWVSERAPLLHHCLSTFVHTRCFLYGSAARTKGVTGLPSTAGDLPPSMAVFSPPQPQQPSVLLEEFQAELFGLALSNKALQGPWLRLYTSEEDGMSFNRRVCFKLTGFGGPTVILVKEKGTGAVYGGCADSPWKESNSCYGGERSFLLSLAPEFKIIPSK 615
V+L W S PL+H ST++ +CF + RT +S P+ S +L + E L+ + LQ W RLYTS +DG+SFNR +C+ L G+ GPT+I+ GA +G D+PW++ + +GG FL L P + PS
Sbjct: 169 VTLLHLTTWASRTFPLMHTIFSTWMSKKCFKSMPSTRTS------------------YSTPELSHASDILS--RGEAIVLSGQSAQLQNQWDRLYTSTQDGLSFNR-LCYHLLGYSGPTLIVCTAT-DGATFGAYCDTPWRDQSKFFGGPGCFLYRLRPNLLVCPSS 313 The following BLAST results are available for this feature:
BLAST of mRNA_H-paniculata_contig30586.8287.1 vs. uniprot
Analysis Date: 2022-09-19 (Diamond blastx: OGS1.0 vs UniRef90) Total hits: 25
Pagesback to topAlignments
The following features are aligned
Analyses
This mRNA is derived from or has results from the following analyses
Properties
Relationships
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
Sequences
The following sequences are available for this feature:
protein sequence of mRNA_H-paniculata_contig30586.8287.1 >prot_H-paniculata_contig30586.8287.1 ID=prot_H-paniculata_contig30586.8287.1|Name=mRNA_H-paniculata_contig30586.8287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=polypeptide|length=214bp MRRFRSEKLAASVISFVHPPTKAKIPGGGGAGEDVPGRVSLAQFQRWVSEback to top mRNA from alignment at H-paniculata_contig30586:135..1611- Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.>mRNA_H-paniculata_contig30586.8287.1 ID=mRNA_H-paniculata_contig30586.8287.1|Name=mRNA_H-paniculata_contig30586.8287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=mRNA|length=1477bp|location=Sequence derived from alignment at H-paniculata_contig30586:135..1611- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top Coding sequence (CDS) from alignment at H-paniculata_contig30586:135..1611- >mRNA_H-paniculata_contig30586.8287.1 ID=mRNA_H-paniculata_contig30586.8287.1|Name=mRNA_H-paniculata_contig30586.8287.1|organism=Halopteris paniculata Hal_grac_a_UBK monoicous|type=CDS|length=1284bp|location=Sequence derived from alignment at H-paniculata_contig30586:135..1611- (Halopteris paniculata Hal_grac_a_UBK monoicous)back to top |